Contig-U15987-1
Contig ID Contig-U15987-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15987-1 (Contig-U15987-1Q) /CSM_Contig/Contig-U15987-1Q.Seq.d
AAAAAATAATTCGATAGAGGCAAACTCTTTGAAAAGTGATGAAGGTTCTC
TTTTGAATTCAATAAAACGAGGATATTCATTAAAAGCAGTTCCAGAGAAA
TTAAAAGAAGAAGCCAAAACTATTGATAATCTTTCTGCACAATTAATAAA
TTCTCTAAGTCGTAGAAGAGTAGCTATTGATTGTATTGAAAATGACGAAG
ACGACGACGACGATGATGCTTGGTCAGACGAACCAGTAAAGAAAGGAGGA
AGTGGTGGCGGCGGTAGTGGAAGTTCATACTCTTTTGGAGGTGTACCCAA
TGCTATTACTTCTCTTGTTACAGCTTCTTCTACTCCTGCTTCCTATTTAG
CAGCCAAATCTCAACCAAAAGACGAAGAAGAAGAGTGGGGTGATGAAGAT
ATGGGTTTTGATCTTTTTGGTGACTATCCAACATCATCAACAACAACAAC
AAAAGCAGCAGCAACAACAACAGTTTCAAAGCCAACATCGTTACCTAAAA
AAAAGGAATCATATGATGAAGATGAAGACATGGGATTTGGTCTTTTTGGT
GATGAAGAAGATTATCAATTACAAAGGGTATTGTCTCAATCCTTATATGA
ATCAAAACAAATACAACCACAACAACCAAAATCAGGACCACAAAAAGAAC
AAGAAGAGTCTGATGGAGAAGGGGATTGTGGTTTTGGATTATTTGGCGAA
TACGATGATTATTGTCCACCACCACCAAAGTCACAACCACAACCACAGCT
ACAATCTCAAAAGCAACAAGAAAGATAAGATAAAGAACAAGAAGAGTCTG
ATGA----------TTCTTTATTTTAGAACTTTTCAAGATTTTCGTTAAA
CTCCTCAAACCTTTTACTACAGTTTCATTCGGGGTTTTCATTTCAAAATT
TAATTTTACAACTGGTGGGTCAGTTTTGAAATCTTTTGGTTTTAAAGATG
ATGTTTTCCCTGGTTTTTTAAAACTTTCCAAGAAATTTCTTTTTTTTTAA
TAAATAAAAATTATAATTAAAAATAAAATTAAAATAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A

Gap gap included
Contig length 1091
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4685824
End point 4684810
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U15987
List of clone(s)

est1=VHA618Z,1,762
est2=FC-AS20F,185,804
est3=FC-AS20Z,805,1091
Translated Amino Acid sequence
kiir*rqtl*kvmkvlf*iq*nedih*kqfqrn*kkkpklliiflhn**il*vvee*lli
vlkmtkttttmmlgqtnq*rkeevvaavvevhtllevypmllllllqllllllpi*QPNL
NQKTKKKSGVMKIWVLIFLVTIQHHQQQQQKQQQQQQFQSQHRYLKKRNHMMKMKTWDLV
FLVMKKIINYKGYCLNPYMNQNKYNHNNQNQDHKKNKKSLMEKGIVVLDYLANTMIIVHH
HQSHNHNHSYNLKSNKKDKIKNKKSLM---

---FFILELFKIFVKLLKPFTTVSFGVFISKFNFTTGGSVLKSFGFKDDVFPGFLKLSKK
FLFF**ikiiiknkikikkkkkkkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
kk*fdrgklfek**rfsfefnktrifiksssreikrrsqny**sfctinkfsks*kssy*
ly*k*rrrrrr*clvrrtskerrkwwrr*wkfilfwrctqcyyfscysffyscflfssqi
stkrrrrrvg**rygf*sfw*lsniinnnnksssnnnsfkanivt*kkgii**r*rhgiw
sfw**rrlsitkgivsili*iktntttttkirttkrtrrv*wrrglwfwiiwrir*llst
ttkvtttttatiskatrkir*rtrrv**---

---FFILELFKIFVKLLKPFTTVSFGVFISKFNFTTGGSVLKSFGFKDDVFPGFLKLSKK
FLFF**ikiiiknkikikkkkkkkkkkkkkkkkkkkkk

Frame B:
knnsieanslksdegsllnsikrgyslkavpeklkeeaktidnlsaqlinslsrrrvaid
ciendeddddddawsdepvkkggsggggsgssysfggvpnaitslvtasstpasylaaks
qpkdeeeewgdedmgfdlfgdyptssttttkaaatttvskptslpkkkesydededmgfg
lfgdeedyqlqrvlsqslyeskqiqpqqpksgpqkeqeesdgegdcgfglfgeyddycpp
ppksqpqpqlqsqkqqer*dkeqeesd---

---slf*nfsrfslnssnlllqfhsgfsfqnlilqlvgqf*nllvlkmmfslvf*nfprn
ffffnk*kl*lkiklk*kkkkkkkkkkkkkkkkkkkkk

Frame C:
kiir*rqtl*kvmkvlf*iq*nedih*kqfqrn*kkkpklliiflhn**il*vvee*lli
vlkmtkttttmmlgqtnq*rkeevvaavvevhtllevypmllllllqllllllpi*QPNL
NQKTKKKSGVMKIWVLIFLVTIQHHQQQQQKQQQQQQFQSQHRYLKKRNHMMKMKTWDLV
FLVMKKIINYKGYCLNPYMNQNKYNHNNQNQDHKKNKKSLMEKGIVVLDYLANTMIIVHH
HQSHNHNHSYNLKSNKKDKIKNKKSLM---

---lyfrtfqdfr*tpqtfyysfirgfhfki*fynwwvsfeifwf*r*cfpwffktfqei
sfflinknyn*k*n*nkkkkkkkkkkkkkkkkkkkkkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15987-1 (Contig-U15987-1Q)
/CSM_Contig/Contig-U15987-1Q.Seq.d
(1101 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15987-1 (Contig-U15987-1Q) /CSM_Contig/Conti... 918 0.0
Contig-U14072-1 (Contig-U14072-1Q) /CSM_Contig/Conti... 48 3e-05
Contig-U12184-1 (Contig-U12184-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U12138-1 (Contig-U12138-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U09523-1 (Contig-U09523-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U16101-1 (Contig-U16101-1Q) /CSM_Contig/Conti... 38 0.028
Contig-U15736-1 (Contig-U15736-1Q) /CSM_Contig/Conti... 38 0.028
Contig-U15647-1 (Contig-U15647-1Q) /CSM_Contig/Conti... 38 0.028
Contig-U15393-1 (Contig-U15393-1Q) /CSM_Contig/Conti... 38 0.028
Contig-U14525-1 (Contig-U14525-1Q) /CSM_Contig/Conti... 38 0.028

>Contig-U15987-1 (Contig-U15987-1Q) /CSM_Contig/Contig-U15987-1Q.Seq.d
Length = 1101

Score = 918 bits (463), Expect = 0.0
Identities = 509/517 (98%)
Strand = Plus / Plus


Query: 473 gtttcaaagccaacatcgttacctnnnnnnnnggaatcatatgatgaagatgaagacatg 532
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 473 gtttcaaagccaacatcgttacctaaaaaaaaggaatcatatgatgaagatgaagacatg 532


Query: 533 ggatttggtctttttggtgatgaagaagattatcaattacaaagggtattgtctcaatcc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggatttggtctttttggtgatgaagaagattatcaattacaaagggtattgtctcaatcc 592


Query: 593 ttatatgaatcaaaacaaatacaaccacaacaaccaaaatcaggaccacaaaaagaacaa 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttatatgaatcaaaacaaatacaaccacaacaaccaaaatcaggaccacaaaaagaacaa 652


Query: 653 gaagagtctgatggagaaggggattgtggttttggattatttggcgaatacgatgattat 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gaagagtctgatggagaaggggattgtggttttggattatttggcgaatacgatgattat 712


Query: 713 tgtccaccaccaccaaagtcacaaccacaaccacagctacaatctcaaaagcaacaagaa 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tgtccaccaccaccaaagtcacaaccacaaccacagctacaatctcaaaagcaacaagaa 772


Query: 773 agataagataaagaacaagaagagtctgatgannnnnnnnnnttctttattttagaactt 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 agataagataaagaacaagaagagtctgatgannnnnnnnnnttctttattttagaactt 832


Query: 833 ttcaagattttcgttaaactcctcaaaccttttactacagtttcattcggggttttcatt 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ttcaagattttcgttaaactcctcaaaccttttactacagtttcattcggggttttcatt 892


Query: 893 tcaaaatttaattttacaactggtgggtcagttttgaaatcttttggttttaaagatgat 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 tcaaaatttaattttacaactggtgggtcagttttgaaatcttttggttttaaagatgat 952


Query: 953 gttttccctggttttttaaaactttccaagaaatttc 989
|||||||||||||||||||||||||||||||||||||
Sbjct: 953 gttttccctggttttttaaaactttccaagaaatttc 989


Score = 848 bits (428), Expect = 0.0
Identities = 428/428 (100%)
Strand = Plus / Plus


Query: 1 aaaaaataattcgatagaggcaaactctttgaaaagtgatgaaggttctcttttgaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaaataattcgatagaggcaaactctttgaaaagtgatgaaggttctcttttgaattc 60


Query: 61 aataaaacgaggatattcattaaaagcagttccagagaaattaaaagaagaagccaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aataaaacgaggatattcattaaaagcagttccagagaaattaaaagaagaagccaaaac 120


Query: 121 tattgataatctttctgcacaattaataaattctctaagtcgtagaagagtagctattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattgataatctttctgcacaattaataaattctctaagtcgtagaagagtagctattga 180


Query: 181 ttgtattgaaaatgacgaagacgacgacgacgatgatgcttggtcagacgaaccagtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgtattgaaaatgacgaagacgacgacgacgatgatgcttggtcagacgaaccagtaaa 240


Query: 241 gaaaggaggaagtggtggcggcggtagtggaagttcatactcttttggaggtgtacccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaggaggaagtggtggcggcggtagtggaagttcatactcttttggaggtgtacccaa 300


Query: 301 tgctattacttctcttgttacagcttcttctactcctgcttcctatttagcagccaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctattacttctcttgttacagcttcttctactcctgcttcctatttagcagccaaatc 360


Query: 361 tcaaccaaaagacgaagaagaagagtggggtgatgaagatatgggttttgatctttttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaaccaaaagacgaagaagaagagtggggtgatgaagatatgggttttgatctttttgg 420


Query: 421 tgactatc 428
||||||||
Sbjct: 421 tgactatc 428


Score = 40.1 bits (20), Expect = 0.007
Identities = 29/32 (90%)
Strand = Plus / Plus


Query: 392 gatgaagatatgggttttgatctttttggtga 423
|||||||| ||||| |||| ||||||||||||
Sbjct: 521 gatgaagacatgggatttggtctttttggtga 552


Score = 40.1 bits (20), Expect = 0.007
Identities = 29/32 (90%)
Strand = Plus / Plus


Query: 521 gatgaagacatgggatttggtctttttggtga 552
|||||||| ||||| |||| ||||||||||||
Sbjct: 392 gatgaagatatgggttttgatctttttggtga 423


>Contig-U14072-1 (Contig-U14072-1Q) /CSM_Contig/Contig-U14072-1Q.Seq.d
Length = 516

Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 191 aatgacgaagacgacgacgacgatgatg 218
|||||||| |||||||||||||||||||
Sbjct: 69 aatgacgacgacgacgacgacgatgatg 96


Score = 30.2 bits (15), Expect = 6.9
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 194 gacgaagacgacgacgacgatga 216
||||| ||||||||||| |||||
Sbjct: 75 gacgacgacgacgacgatgatga 97


>Contig-U12184-1 (Contig-U12184-1Q) /CSM_Contig/Contig-U12184-1Q.Seq.d
Length = 938

Score = 40.1 bits (20), Expect = 0.007
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 245 ggaggaagtggtggcggcgg 264
||||||||||||||||||||
Sbjct: 48 ggaggaagtggtggcggcgg 67


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,294
Number of Sequences: 8402
Number of extensions: 22294
Number of successful extensions: 3388
Number of sequences better than 10.0: 441
length of query: 1101
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1085
effective length of database: 7,941,110
effective search space: 8616104350
effective search space used: 8616104350
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3. 7
Homology vs DNA
Query= Contig-U15987-1 (Contig-U15987-1Q) /CSM_Contig/Contig-U15987-1Q.Seq.d
(1101 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ436714) Dictyostelium discoideum cDNA clone:ddv32c06, 3' ... 848 0.0 3
(C24385) Dictyostelium discoideum gamete cDNA, clone FC-AS20. 595 0.0 2
(C24386) Dictyostelium discoideum gamete cDNA, clone FC-AS20. 236 1e-57 1
(EH636172) EST7280 LK04 Laupala kohalensis cDNA clone 106102... 52 9e-04 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 42 0.001 8
(EE623208) CHWS1212.b1_G15.ab1 CHW(LMS) silverleaf sunflower... 38 0.006 3
(AU284781) Dictyostelium discoideum gamete cDNA clone:FC-BK1... 36 0.006 4
(AX829996) Sequence 716 from Patent WO03072602. 54 0.008 2
(AX818966) Sequence 716 from Patent EP1338608. 54 0.008 2
(DD380256) A polynucleotide for detecting heavy metal respon... 46 0.008 2
(EL763314) AD0202014 Taenia solium UNAM-cd1_adult Taenia sol... 46 0.009 2
(EY335861) CAWY731.fwd CAWY Helobdella robusta Subtracted Ea... 40 0.010 2
(EY336822) CAWY7932.fwd CAWY Helobdella robusta Subtracted E... 40 0.010 2
(FE750931) CAYF1342.b3 CAYF Petrolisthes cinctipes heart, wh... 40 0.011 2
(U00240) Caenorhabditis elegans beta-amyloid protein precurs... 46 0.011 2
(EY346745) CAWZ15242.rev CAWZ Helobdella robusta Primary Lat... 46 0.011 2
(DQ332057) Synthetic construct Saccharomyces cerevisiae clon... 54 0.011 1
(Z29488) S.cerevisiae (FL100) gene for RRP3p. 54 0.011 1
(U19027) Saccharomyces cerevisiae chromosome XII cosmid 8083. 54 0.011 1
(I85817) Sequence 32 from patent US 5698686. 54 0.011 1
(I85813) Sequence 27 from patent US 5698686. 54 0.011 1
(I85812) Sequence 25 from patent US 5698686. 54 0.011 1
(DJ210059) Method for identification of useful proteins deri... 54 0.011 1
(DJ025880) Genome-wide DNA marker of Saccharomyces cerevisiae. 54 0.011 1
(AR209881) Sequence 32 from patent US 6387619. 54 0.011 1
(AR209877) Sequence 27 from patent US 6387619. 54 0.011 1
(AR209876) Sequence 25 from patent US 6387619. 54 0.011 1
(DV124408) CV03039A2A04.f1 CV03-normalized library Euphorbia... 54 0.011 1
(DV122686) CV03034A2A08.f1 CV03-normalized library Euphorbia... 54 0.011 1
(EY307872) CAWX20712.fwd CAWX Helobdella robusta Primary Ear... 54 0.011 1
(EY296989) CAWX13114.fwd CAWX Helobdella robusta Primary Ear... 54 0.011 1
(EY377372) CAXA16685.rev CAXA Helobdella robusta Subtracted ... 46 0.012 2
(EY392662) CAXA9929.rev CAXA Helobdella robusta Subtracted L... 46 0.013 2
(DH496487) Monosiga ovata DNA, fosmid clone: MOF-061D16, gen... 40 0.020 3
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.023 11
(AC226512) Solanum lycopersicum chromosome 2 clone C02HBa019... 46 0.030 3
(DT581328) ltu01-29ms1-j03 Ltu01 Liriodendron tulipifera cDN... 40 0.037 2
(FD500608) Ltu01b_218_C08_C012.g1 Liriodendron Flower Bud Li... 40 0.037 2
(DY529312) BAAC-PNP1310G05.g2 C.remanei EST SB146 Caenorhabd... 52 0.045 1
(DY526599) BAAC-PNP1311F14.g1 C.remanei EST SB146 Caenorhabd... 52 0.045 1
(DY526211) BAAC-PNP1309E18.g1 C.remanei EST SB146 Caenorhabd... 52 0.045 1
(DT935677) BAAC-PNP1281M18.g1 C.remanei EST SB146 Caenorhabd... 52 0.045 1
(DR778372) BAAC-PNP1256M12.g1 C.remanei EST SB146 Caenorhabd... 52 0.045 1
(DR775889) BAAC-PNP1250A01.g1 C.remanei EST SB146 Caenorhabd... 52 0.045 1
(CV015152) Z03-D09X cDNA cold acclimated (CA) Rhododendron l... 52 0.045 1
(EY392723) CAXA9959.fwd CAXA Helobdella robusta Subtracted L... 52 0.045 1
(EY389326) CAXA7789.fwd CAXA Helobdella robusta Subtracted L... 52 0.045 1
(EY385972) CAXA5974.rev CAXA Helobdella robusta Subtracted L... 52 0.045 1
(EY385586) CAXA5769.fwd CAXA Helobdella robusta Subtracted L... 52 0.045 1
(EY384555) CAXA5211.fwd CAXA Helobdella robusta Subtracted L... 52 0.045 1
(EY384482) CAXA5171.fwd CAXA Helobdella robusta Subtracted L... 52 0.045 1
(EY378220) CAXA17142.fwd CAXA Helobdella robusta Subtracted ... 52 0.045 1
(EY378219) CAXA17142.rev CAXA Helobdella robusta Subtracted ... 52 0.045 1
(EY373255) CAXA14460.fwd CAXA Helobdella robusta Subtracted ... 52 0.045 1
(EY369788) CAXA12548.fwd CAXA Helobdella robusta Subtracted ... 52 0.045 1
(EY366512) CAXA10768.rev CAXA Helobdella robusta Subtracted ... 52 0.045 1
(EY365946) CAXA10477.rev CAXA Helobdella robusta Subtracted ... 52 0.045 1
(AZ140762) SP_0003_B2_H09_SP6E Strongylocentrotus purpuratus... 32 0.050 4
(EB058508) StheSEQ4709 Sporotrichum thermophile pBluescript ... 50 0.051 2
(U56966) Caenorhabditis elegans cosmid C42D8, complete seque... 46 0.061 3
(ER544675) 1093016143189 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.064 3
(EH742735) CNMS2417.b1_B05.ab1 CNM(LMS) spotted knapweed Cen... 34 0.094 3
(DU716255) pyo48f01.g1 HK104 Caenorhabditis briggsae genomic... 46 0.12 2
(CO785043) BL282B_F07 6-Day Axolotl Tail Blastema (6DAxBL) A... 46 0.12 2
(CO552792) AcLy994 Sea lamprey AcLy Petromyzon marinus cDNA,... 44 0.12 2
(CN868188) 010412AAOA009569HT (AAOA) Royal Gala phloem Malus... 42 0.14 2
(DR990910) Mdlr7006K14.g1 Apple_EST_Mdlr Malus x domestica c... 42 0.14 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 46 0.16 3
(EY341972) CAWZ11457.fwd CAWZ Helobdella robusta Primary Lat... 46 0.18 2
(U85091) Danio rerio transcriptional regulator Sox-11B (sox1... 50 0.18 1
(EU327050) Pseudopodoces humilis clone 13 microsatellite PMA... 50 0.18 1
(BX248324) Zebrafish DNA sequence from clone DKEY-227H16 in ... 50 0.18 1
(BC049441) Danio rerio SRY-box containing gene 11b, mRNA (cD... 50 0.18 1
(AJ237813) Danio rerio mRNA for Sox 11b protein. 50 0.18 1
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 50 0.18 1
(AP007231) Oryza sativa Japonica Group genomic DNA, chromoso... 50 0.18 1
(AP003685) Oryza sativa Japonica Group genomic DNA, chromoso... 50 0.18 1
(AK068831) Oryza sativa Japonica Group cDNA clone:J013158G13... 50 0.18 1
(AC108995) Rattus norvegicus clone CH230-298L20, *** SEQUENC... 50 0.18 1
(AC106124) Rattus norvegicus clone CH230-119E11, *** SEQUENC... 50 0.18 1
(AP003624) Oryza sativa Japonica Group genomic DNA, chromoso... 50 0.18 1
(AC225563) Zea mays chromosome 2 clone CH201-216A21; ZMMBBc0... 50 0.18 1
(AC214123) Zea mays chromosome 2 clone CH201-150E18; ZMMBBc0... 50 0.18 1
(EL698915) HGE055 Scorpion venom gland library 1 Hadrurus ge... 50 0.18 1
(EL698884) HGE007 Scorpion venom gland library 1 Hadrurus ge... 50 0.18 1
(EL418258) CHCL6708.b1_H21.ab1 CHC(LMS) Texas blueweed Helia... 50 0.18 1
(EH497612) FDR107-P00039-DEPE-F_G10 FDR107 Danio rerio cDNA ... 50 0.18 1
(AV762811) Homo sapiens cDNA clone:MDSDOD03, 5'end, expresse... 50 0.18 1
(EB940502) 9704624 ZF34 Danio rerio cDNA clone 3410458, mRNA... 50 0.18 1
(EB848031) 7216050 KZ68 Danio rerio cDNA clone 2681019, mRNA... 50 0.18 1
(EB846325) 6681202 KZ58 Danio rerio cDNA clone 2543051, mRNA... 50 0.18 1
(EB842513) 6708219 KZ58 Danio rerio cDNA clone 2551825, mRNA... 50 0.18 1
(EB840229) 6708304 KZ58 Danio rerio cDNA clone 2551825, mRNA... 50 0.18 1
(EB831059) 6725294 KZ58 Danio rerio cDNA clone 2546289, mRNA... 50 0.18 1
(EB056545) StheSEQ2205 Sporotrichum thermophile pBluescript ... 50 0.18 1
(AM759659) Ephydatia muelleri EST, 5' end sequence, clone IL... 50 0.18 1
(CV104802) AGENCOURT_31574463 NIH_ZGC_15 Danio rerio cDNA cl... 50 0.18 1
(CT900750) Phaeodactylum tricornutum 5-PRIME EST from clone ... 50 0.18 1
(CT664238) Danio rerio EST, clone ZF_mu_223a16 5'. 50 0.18 1
(CK808552) Rasgsc1258 Salivary Gland 4th instar 3rd period (... 50 0.18 1
(CK148115) AGENCOURT_16918472 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CK146998) AGENCOURT_16917075 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CK146006) AGENCOURT_16917932 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CK145897) AGENCOURT_16917889 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CK145826) AGENCOURT_16947011 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CK145470) AGENCOURT_16920098 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CI337518) Oryza sativa Japonica Group cDNA, clone: J01B3160... 50 0.18 1
(CI337000) Oryza sativa Japonica Group cDNA, clone: J01B3158... 50 0.18 1
(AI964986) fc85b12.y1 Zebrafish WashU MPIMG EST Danio rerio ... 50 0.18 1
(AI958073) fc90d10.y1 Zebrafish WashU MPIMG EST Danio rerio ... 50 0.18 1
(CI077953) Oryza sativa Japonica Group cDNA, clone: 016-M090... 50 0.18 1
(CF999546) AGENCOURT_16391465 NIH_ZGC_7 Danio rerio cDNA clo... 50 0.18 1
(CD754864) AGENCOURT_14629079 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD754747) AGENCOURT_14618383 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD753341) AGENCOURT_14628261 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD752564) AGENCOURT_14638221 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD752093) AGENCOURT_14638574 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD752004) AGENCOURT_14624054 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD751852) AGENCOURT_14627741 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD751764) AGENCOURT_14626505 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CD590410) RK058A1B07.T3 Zebrafish Kidney Marrow cDNA librar... 50 0.18 1
(CD281619) G44471.34 NCI_CGAP_ZEmb2 Danio rerio cDNA clone I... 50 0.18 1
(CD281451) G39215.94 NCI_CGAP_ZEmb2 Danio rerio cDNA clone I... 50 0.18 1
(CB356148) ZF001-P00016-DPE-F-D_B02 GISZF001 Danio rerio cDN... 50 0.18 1
(CB353415) ZF001-P00007-DPE-F3-C_A06 GISZF001 Danio rerio cD... 50 0.18 1
(CA975098) AGENCOURT_11076565 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(CA495804) AGENCOURT_10812334 NCI_CGAP_ZEmb2 Danio rerio cDN... 50 0.18 1
(AI626527) fc11c08.y1 Zebrafish WashU MPIMG EST Danio rerio ... 50 0.18 1
(AI609481) tt82g02.x1 NCI_CGAP_Brn21 Homo sapiens cDNA clone... 50 0.18 1
(BP026283) Ciona intestinalis cDNA, clone:cits43d02, 5' end,... 50 0.18 1
(BM957631) fy67d06.y1 Sugano SJD adult male Danio rerio cDNA... 50 0.18 1
(BM418925) R006F11 Oryza sativa mature leaf library induced ... 50 0.18 1
(GE397631) 293782035 Nasonia vitripennis Female Pupae Nasoni... 50 0.18 1
(GE355578) 291520937 Nasonia vitripennis Male Pupae Nasonia ... 50 0.18 1
(FK206993) XABT215255.b1 Gateway compatible cien cDNA librar... 50 0.18 1
(FK138313) XABT172824.b1 Gateway compatible cien cDNA librar... 50 0.18 1
(FK059166) XABT123322.b1 Gateway compatible cien cDNA librar... 50 0.18 1
(FF702730) XABT111316.fwd Gateway compatible cien cDNA libra... 50 0.18 1
(EY357254) CAWZ4802.fwd CAWZ Helobdella robusta Primary Late... 50 0.18 1
(EY337817) CAWY8582.fwd CAWY Helobdella robusta Subtracted E... 50 0.18 1
(EX973695) CAGO6786.fwd CAGO Karenia brevis Karbr Stressed (... 50 0.18 1
(AW174313) fi41f02.y1 Sugano Kawakami zebrafish DRA Danio re... 50 0.18 1
(AW133574) fi03h03.y1 Sugano Kawakami zebrafish DRA Danio re... 50 0.18 1
(DR139749) 49133904 Drosophila pseudoobscura embryonic cDNA ... 40 0.19 3
(CU653308) ovine foetal ovary tissues (Prophase I meiosis) -... 46 0.31 2
(EE843468) 010914OSAB012037HT OSAB Ovis aries cDNA, mRNA seq... 46 0.31 2
(DX682188) 2477859 VV03 Ustilago maydis genomic clone 106654... 38 0.35 2
(DX717253) 2517400 VV03 Ustilago maydis genomic clone 108358... 38 0.36 2
(DX778368) 2655494 VV07 Ustilago maydis genomic clone 116021... 38 0.38 2
(AC117299) Rattus norvegicus clone CH230-150B14, *** SEQUENC... 40 0.40 5
(DX635267) 2022157 VV02 Ustilago maydis genomic clone 820844... 38 0.41 2
(BV729541) MPGD25 Foxtail millet genomic SSR sequence Setari... 38 0.42 2
(DQ483705) Gymnogyps californianus contig 128F microsatellit... 34 0.42 3
(FG067799) dlbw0_005358 cDNA library of cambium of Betula pl... 38 0.44 2
(AM859097) Crassostrea gigas EST, 5' end sequence, clone cdn... 32 0.44 4
(AF305831) Trichinella pseudospiralis J5 mRNA, complete cds. 48 0.45 2
(BP181501) Bombyx mori cDNA, clone: ovS329A11f, 5' end seque... 46 0.45 2
(EC045226) 3165664 BG03 Ustilago maydis cDNA clone 1425292, ... 38 0.47 2
(FC843655) CBHN2673.fwd CBHN Metridium senile tentacle Metri... 38 0.48 2
(DX640165) 2285586 VV02 Ustilago maydis genomic clone 937168... 38 0.49 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 0.49 8
(EE846759) 010914OSAB018051HT OSAB Ovis aries cDNA, mRNA seq... 46 0.50 2
(EB054934) StheSEQ14459 Sporotrichum thermophile pBluescript... 38 0.51 2
(BJ390222) Dictyostelium discoideum cDNA clone:dds21i16, 5' ... 38 0.51 2
(FE499974) CAOT9771.rev CAOT Selaginella moellendorffii mixe... 40 0.52 2
(DC561207) Bombyx mori cDNA, clone:E_FL_wd--_26O04_F_0, 5' e... 46 0.53 2
(DX723152) 2348066 VV03 Ustilago maydis genomic clone 100838... 38 0.54 2
(CV941806) PMrpct_4381 mating of 88069 (A1) and 618 (A2) Phy... 42 0.54 2
(DY476203) sh1-ach15_l0.s2 adult sheep fracture callus pool ... 46 0.55 2
(DY476611) sh1-aea04_l0.s2 adult sheep fracture callus pool ... 46 0.55 2
(DY497274) sh2P0021I13_F.ab1 adult sheep fracture callus 7d ... 46 0.55 2
(DY499068) sh2P0033D18_F.ab1 adult sheep fracture callus 7d ... 46 0.56 2
(EE861202) 010723OSTA011004HT OSTA Ovis aries cDNA, mRNA seq... 46 0.56 2
(CN823553) Oa_splbn_05E16_M13reverse Sheep spleen\brain pSpo... 46 0.57 2
(BP121899) Bombyx mori cDNA, clone:ceN-5541, 5' end sequence. 46 0.58 2
(EE866412) 010914OSTA121052HT OSTA Ovis aries cDNA, mRNA seq... 46 0.58 2
(BY928724) Bombyx mori cDNA, clone:E_EL_fcP8_21F07_R_0, 3' e... 46 0.58 2
(EE857144) 010914OSTA049017HT OSTA Ovis aries cDNA, mRNA seq... 46 0.59 2
(BP119830) Bombyx mori cDNA, clone:ceN-1379, 5' end sequence. 46 0.59 2
(FC850103) CBHN6148.fwd CBHN Metridium senile tentacle Metri... 38 0.59 2
(EE859741) 010914OSTA114057HT OSTA Ovis aries cDNA, mRNA seq... 46 0.60 2
(BY927087) Bombyx mori cDNA, clone:E_EL_fcP8_01B06_R_0, 3' e... 46 0.60 2
(DY499072) sh2P0033D24_F.ab1 adult sheep fracture callus 7d ... 46 0.61 2
(ER511863) 1093015455138 Global-Ocean-Sampling_GS-35-01-01-1... 46 0.61 2
(BP119515) Bombyx mori cDNA, clone:ceN-0984, 5' end sequence. 46 0.61 2
(FC841957) CBHN1726.fwd CBHN Metridium senile tentacle Metri... 38 0.62 2
(BP120897) Bombyx mori cDNA, clone:ceN-3850, 5' end sequence. 46 0.62 2
(EE751313) 020502OCSI1017045HT OCS1 Ovis aries cDNA, mRNA se... 46 0.62 2
(EE863317) 020731OSTA161006HT OSTA Ovis aries cDNA, mRNA seq... 46 0.63 2
(FC843053) CBHN2345.fwd CBHN Metridium senile tentacle Metri... 38 0.63 2
(EE759550) 020829OD10L015087HT OD10L Ovis aries cDNA, mRNA s... 46 0.64 2
(FC854645) CBHN8605.fwd CBHN Metridium senile tentacle Metri... 38 0.65 2
(FG170556) AGN_RNC001xg01f1.ab1 AGN_RNC Nicotiana tabacum cD... 44 0.65 2
(EE758251) 020322OCS411002011HT OCS4 Ovis aries cDNA, mRNA s... 46 0.65 2
(FH405196) CHO_OF4836xp12r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.65 2
(EE758844) 020829OD10L018054HT OD10L Ovis aries cDNA, mRNA s... 46 0.66 2
(FH221370) CHO_OF3379xd16f1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 0.66 2
(BY928651) Bombyx mori cDNA, clone:E_EL_fcP8_20F08_R_0, 3' e... 46 0.66 2
(EE762690) 021030OD15L023029HT OD15L Ovis aries cDNA, mRNA s... 46 0.66 2
(EE796513) 030729OMU903005016HT OMU90 Ovis aries cDNA, mRNA ... 46 0.66 2
(FH443401) CHO_OF4636xf01f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.67 2
(FI079143) CHO_OF7381xc13r1.ab1 CHO_OF7 Nicotiana tabacum ge... 44 0.68 2
(FC826806) CBHI1346.fwd CBHI Metridium senile tentacle Metri... 38 0.68 2
(EL418567) CHCL6991.b1_M19.ab1 CHC(LMS) Texas blueweed Helia... 46 0.68 2
(AU053723) Dictyostelium discoideum slug cDNA, clone SLJ555. 38 0.68 2
(EE872987) 020829OVMG1010A007HT OVMG Ovis aries cDNA, mRNA s... 46 0.69 2
(FH404625) CHO_OF4835xp12r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.70 2
(EE835660) 021030OOCX025091HT OOCX Ovis aries cDNA, mRNA seq... 46 0.70 2
(AC129203) Mus musculus BAC clone RP24-225M1 from chromosome... 48 0.70 1
(AR517156) Sequence 22116 from patent US 6703491. 48 0.70 1
(AR501874) Sequence 6834 from patent US 6703491. 48 0.70 1
(EU643484) Adineta vaga clone Av198_A basic region leucine z... 48 0.70 1
(AY061567) Drosophila melanogaster SD01079 full length cDNA. 48 0.70 1
(AF361475) Dictyostelium discoideum double histidine kinase ... 48 0.70 1
(AF029704) Dictyostelium discoideum hybrid histidine kinase ... 48 0.70 1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ... 48 0.70 1
(AC159703) Trypanosoma brucei chromosome 8 clone RPCI93-30K1... 48 0.70 1
(AC159405) Trypanosoma brucei chromosome 8 clone RPCI93-11J1... 48 0.70 1
(AC024744) Caenorhabditis elegans cosmid Y108G3AL, complete ... 48 0.70 1
(AL512329) Human DNA sequence from clone RP11-157J24 on chro... 48 0.70 1
(AL034344) Human DNA sequence from clone RP1-118B18 on chrom... 48 0.70 1
(AC151050) Zea mays clone ZMMBBc0243P06, *** SEQUENCING IN P... 48 0.70 1
(AC126873) Rattus norvegicus clone CH230-107I14, *** SEQUENC... 48 0.70 1
(AC095693) Rattus norvegicus clone CH230-9D4, WORKING DRAFT ... 48 0.70 1
(FP090905) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.70 1
(AC207765) Zea mays chromosome 6 clone CH201-136L4; ZMMBBc01... 48 0.70 1
(AC194094) Zea mays chromosome 9 clone CH201-243P6; ZMMBBc02... 48 0.70 1
(AC171127) Helobdella robusta clone CH306-1A1, WORKING DRAFT... 48 0.70 1
(AC011579) Homo sapiens clone RP11-13F18, WORKING DRAFT SEQU... 48 0.70 1
(CR718020) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR715922) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR714673) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR714279) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR712360) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR712099) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR710876) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR710709) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR709377) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR709342) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR707702) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR707675) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR707506) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR705514) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(CR704902) Tetraodon nigroviridis full-length cDNA. 48 0.70 1
(AQ659741) Sheared DNA-16J1.TR Sheared DNA Trypanosoma bruce... 48 0.70 1
(AQ655474) Sheared DNA-25D5.TF Sheared DNA Trypanosoma bruce... 48 0.70 1
(FH609675) CHO_OF4627xp11r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 0.70 1
(ER991878) ZMMBHm0001D15.r ZMMBHm Zea mays genomic clone ZMM... 48 0.70 1
(EH299004) UAHYP_07C_F_H01 UaHyphae_ARS Uromyces appendicula... 48 0.70 1
(EC203793) 380104 CK01 Drosophila melanogaster cDNA clone 15... 48 0.70 1
(DW026815) CFW235-H06.y1d-s SHGC-CFW2 Gasterosteus aculeatus... 48 0.70 1
(DT851623) LB00492.CR_J17 GC_BGC-04 Bos taurus cDNA clone IM... 48 0.70 1
(DT007962) VVG050E04_760839 CabSau Cell Culture (CELu0001) V... 48 0.70 1
(DN655517) CEC17-E09.x1d-t SHGC-CEC Gasterosteus aculeatus c... 48 0.70 1
(CV529278) ALV_010A_E07 Phaseolus vulgaris leaf EST library ... 48 0.70 1
(CO308603) EK258831.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 48 0.70 1
(CN152463) WOUND1_82_F01.b1_A002 Wounded leaves Sorghum bico... 48 0.70 1
(AJ916104) Trichoderma atroviride EST, clone L53TP1P026R02479. 48 0.70 1
(AJ899723) Trichoderma atroviride EST, clone L09T11P064R05996. 48 0.70 1
(AJ899707) Trichoderma atroviride EST, clone L09T11P064R05979. 48 0.70 1
(AJ899678) Trichoderma atroviride EST, clone L09T11P064R05949. 48 0.70 1
(CD431111) ETH1_7_E01.b1_A002 Ethylene-treated seedlings Sor... 48 0.70 1
(BJ856706) Marchantia polymorpha cDNA clone:lwa6p16, 5' end. 48 0.70 1
(BJ352438) Dictyostelium discoideum cDNA clone:dda46c19, 3' ... 48 0.70 1
(BG733879) Oo_L3_01B01_LambdaGT11FOR Ostertagia ostertagi L3... 48 0.70 1
(GE621848) Ss_03F_22D02_T3 Forward subtracted library from f... 48 0.70 1
(GE619546) Ss_14F_30F08_T3 Forward subtracted library from f... 48 0.70 1
(GE619035) Ss_14F_23H04_T3 Forward subtracted library from f... 48 0.70 1
(GE618990) Ss_14F_23C11_T3 Forward subtracted library from f... 48 0.70 1
(GE288571) CBYT4151.g1 CBYT Trichoderma atroviride culture g... 48 0.70 1
(GE288570) CBYT4151.b1 CBYT Trichoderma atroviride culture g... 48 0.70 1
(FL640826) TG_37_H4 Termite gut library Reticulitermes flavi... 48 0.70 1
(FL639160) TG_20_C9 Termite gut library Reticulitermes flavi... 48 0.70 1
(FL638721) TG_15_F7 Termite gut library Reticulitermes flavi... 48 0.70 1
(FL638454) TG_12_G1 Termite gut library Reticulitermes flavi... 48 0.70 1
(FL637627) TG_02_H4 Termite gut library Reticulitermes flavi... 48 0.70 1
(FL419165) 1510289 CERES-197 Zea mays cDNA clone 322222 5', ... 48 0.70 1
(FL403056) 1532545 CERES-197 Zea mays cDNA clone 339721 5', ... 48 0.70 1
(AW965706) EST377779 MAGE resequences, MAGI Homo sapiens cDN... 48 0.70 1
(AW944161) SD01079.3prime SD Drosophila melanogaster Schneid... 48 0.70 1
(FF339130) 280473227 Pea aphid whole body normalized full le... 48 0.70 1
(FF333089) 280452147 Pea aphid whole body normalized full le... 48 0.70 1
(FD044785) CBPO1306.b1 CBPO: Normalized channel catfish cDNA... 48 0.70 1
(EY485442) CBBP14597.fwd CBBP Hirudo medicinalis hermaphrodi... 48 0.70 1
(EY385973) CAXA5974.fwd CAXA Helobdella robusta Subtracted L... 48 0.70 1
(EY381199) CAXA3319.fwd CAXA Helobdella robusta Subtracted L... 48 0.70 1
(EY381158) CAXA3294.fwd CAXA Helobdella robusta Subtracted L... 48 0.70 1
(EY360851) CAWZ740.rev CAWZ Helobdella robusta Primary Late ... 48 0.70 1
(EY350185) CAWZ1746.rev CAWZ Helobdella robusta Primary Late... 48 0.70 1
(EY346092) CAWZ14470.rev CAWZ Helobdella robusta Primary Lat... 48 0.70 1
(EY337339) CAWY8258.fwd CAWY Helobdella robusta Subtracted E... 48 0.70 1
(EY333886) CAWY5987.fwd CAWY Helobdella robusta Subtracted E... 48 0.70 1
(EY319188) CAWX6766.rev CAWX Helobdella robusta Primary Earl... 48 0.70 1
(EY318412) CAWX6366.rev CAWX Helobdella robusta Primary Earl... 48 0.70 1
(EY310159) CAWX21993.rev CAWX Helobdella robusta Primary Ear... 48 0.70 1
(EX648938) 256727627 Pea aphid whole body normalized full le... 48 0.70 1
(EX641075) 256636356 Pea aphid whole body normalized full le... 48 0.70 1
(EX612079) 255378817 Pea aphid whole body normalized full le... 48 0.70 1
(EE793240) 020709OMLT1020011HT OMLT Ovis aries cDNA, mRNA se... 46 0.71 2
(FH434703) CHO_OF4980xc14r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.71 2
(EE757770) 020605OCS411013074HT OCS4 Ovis aries cDNA, mRNA s... 46 0.71 2
(EE746214) 020502OAPP1017055HT OAPP Ovis aries cDNA, mRNA se... 46 0.71 2
(EE794240) 020709OMLT1018095HT OMLT Ovis aries cDNA, mRNA se... 46 0.72 2
(EE773876) 020709OFM1036029HT OFM1 Ovis aries cDNA, mRNA seq... 46 0.73 2
(FG138269) AGN_ELP002xp18f1.ab1 AGN_ELP Nicotiana tabacum cD... 44 0.74 2
(FG135637) AGN_ELP010xb05f1.ab1 AGN_ELP Nicotiana tabacum cD... 44 0.74 2
(EE861592) 020731OSTA164028HT OSTA Ovis aries cDNA, mRNA seq... 46 0.74 2
(EY377319) CAXA16653.fwd CAXA Helobdella robusta Subtracted ... 46 0.75 2
(FE458544) CAOS20099.fwd CAOS Selaginella moellendorffii mix... 40 0.77 2
(AC215901) Populus trichocarpa clone POP110-M11, complete se... 38 0.78 3
(AA420890) CpEST.326 uniZAPCpIOWAsporoLib3 Cryptosporidium p... 32 0.81 3
(ES375321) Tra_Embryo_14_B04 Guppy pDNR_LIB Tranquille Embry... 46 0.93 2
(FF651007) G826P523FC8.T0 Acorn worm normalized juvenile pEx... 44 1.00 2
(EK610588) 1092351004939 Global-Ocean-Sampling_GS-33-01-01-1... 40 1.0 2
(AC186635) Phycomyces blakesleeanus clone JGIBHUS-5E9, compl... 34 1.0 5
(BM165469) EST567992 PyBS Plasmodium yoelii yoelii cDNA clon... 32 1.1 3
(FF638303) G825P592FB10.T0 Acorn worm normalized gastrula pE... 44 1.1 2
(ES336808) CTZ51-F03.x1d-t SHGC-CTZ Ostreococcus lucimarinus... 42 1.1 2
(EB394772) PMAO-aaa67c11.g1 Lamprey_EST_Embryo Petromyzon ma... 36 1.2 2
(CD473595) nad03-12ms1-b07 Nad03 Nuphar advena cDNA clone na... 42 1.2 2
(FF444323) G178P60041RH3.T0 Acorn worm gastrula/neurula pCMV... 44 1.3 2
(BJ943618) Physcomitrella patens subsp. patens cDNA clone:pp... 36 1.3 2
(FF646475) G826P5145FC8.T0 Acorn worm normalized juvenile pE... 44 1.3 2
(FF512312) G709P554RC10.T0 Acorn worm normalized neurula pEx... 44 1.4 2
(FF648068) G826P521FC8.T0 Acorn worm normalized juvenile pEx... 44 1.5 2
(FF663203) G826P5314FH8.T0 Acorn worm normalized juvenile pE... 44 1.5 2
(FF646476) G826P5145RC8.T0 Acorn worm normalized juvenile pE... 44 1.5 2
(FF672019) G826P5395FA12.T0 Acorn worm normalized juvenile p... 44 1.5 2
(DC881101) Ipomoea batatas mRNA, clone: IT2488, 3' end seque... 40 1.5 2
(EK014795) 1092955225671 Global-Ocean-Sampling_GS-31-01-01-1... 32 1.5 3
(AC225993) Zea mays chromosome 2 clone CH201-20M14; ZMMBBc00... 44 1.5 4
(FF664282) G826P532FE10.T0 Acorn worm normalized juvenile pE... 44 1.5 2
(BY830082) Thellungiella halophila cDNA clone: RTFL01-44-O14... 38 1.6 2
(FF659488) G826P5293FB2.T0 Acorn worm normalized juvenile pE... 44 1.6 2
(FF641259) G826P5112FG4.T0 Acorn worm normalized juvenile pE... 44 1.6 2
(FF671884) G826P5394FC1.T0 Acorn worm normalized juvenile pE... 44 1.6 2
(FF670399) G826P5385FC7.T0 Acorn worm normalized juvenile pE... 44 1.6 2
(FF669754) G826P5380FH7.T0 Acorn worm normalized juvenile pE... 44 1.6 2
(FF635779) G825P574FE2.T0 Acorn worm normalized gastrula pEx... 44 1.6 2
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 36 1.6 15
(EB320630) CNSN01-F-086487-501 Normalized CNS library (juven... 32 1.6 3
(DJ296286) Method for identification of useful proteins deri... 38 1.6 2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 32 1.7 8
(FF641260) G826P5112RG4.T0 Acorn worm normalized juvenile pE... 44 1.7 2
(EE121297) G710P5380RD4.T0 Acorn worm normalized juvenile pE... 44 1.7 2
(EE118306) G709P537RD9.T0 Acorn worm normalized neurula pExp... 44 1.7 2
(FF669755) G826P5380RH7.T0 Acorn worm normalized juvenile pE... 44 1.7 2
(FL440730) 25244715 CERES-196 Zea mays cDNA clone 345379 3',... 34 1.7 3
(EE122756) G710P5206FD12.T0 Acorn worm normalized juvenile p... 44 1.7 2
(FF675392) G826P565FG8.T0 Acorn worm normalized juvenile pEx... 44 1.7 2
(EE122631) G709P569FC8.T0 Acorn worm normalized neurula pExp... 44 1.7 2
(EE122956) G710P56FC11.T0 Acorn worm normalized juvenile pEx... 44 1.8 2
(FF665772) G826P5352FH8.T0 Acorn worm normalized juvenile pE... 44 1.8 2
(FF641261) G826P5112FG5.T0 Acorn worm normalized juvenile pE... 44 1.8 2
(EE122784) G710P5209FB8.T0 Acorn worm normalized juvenile pE... 44 1.8 2
(FF653724) G826P5256FD5.T0 Acorn worm normalized juvenile pE... 44 1.8 2
(CN913422) 030108ABMA005237HT (ABMA) M9 phloem Malus x domes... 42 1.8 2
(AC216771) Populus trichocarpa clone POP051-N07, complete se... 38 1.8 4
(CN912620) 021218ABMA004071HT (ABMA) M9 phloem Malus x domes... 42 1.8 2
(FF642223) G826P5119FB8.T0 Acorn worm normalized juvenile pE... 44 1.8 2
(AM670639) Entamoeba terrapinae GSS, clone terra160g02.p1k. 42 1.8 2
(EB329141) CNSN01-F-108985-501 Normalized CNS library (juven... 40 1.8 2
(EE115360) G613P6355RE11.T0 Acorn worm blastula/gastrula pCM... 44 1.8 2
(FF640936) G826P5110FE7.T0 Acorn worm normalized juvenile pE... 44 1.8 2
(FL174747) 1053842 CERES-196 Zea mays cDNA clone 223443 5', ... 34 1.9 3
(FL787185) CCGF14715.g1 CCGF Panicum virgatum early floral b... 44 1.9 2
(FL787184) CCGF14715.b1 CCGF Panicum virgatum early floral b... 44 1.9 2
(BJ438947) Dictyostelium discoideum cDNA clone:ddv38p23, 3' ... 34 1.9 2
(CZ821589) OC__Ba0200D14.f OC__Ba Oryza coarctata genomic cl... 32 1.9 2
(FG809539) UCRVU04_CCNI11124_b1 Cowpea 524B Mixed Tissue and... 32 1.9 2
(FF677318) G826P58RF2.T0 Acorn worm normalized juvenile pExp... 44 1.9 2
(AQ289917) nbxb0036C15f CUGI Rice BAC Library Oryza sativa J... 38 1.9 2
(FG933814) UCRVU09_CCNT12733_b1 Cowpea UCR 707 Mixed Tissue ... 32 1.9 2
(FG860650) UCRVU05_CCNN23512_b1 Cowpea IT84S-2049 Mixed Tiss... 32 1.9 2
(BJ444885) Dictyostelium discoideum cDNA clone:ddv57b19, 3' ... 34 1.9 2
(FF633706) G825P561FB5.T0 Acorn worm normalized gastrula pEx... 44 1.9 2
(BJ581289) Physcomitrella patens subsp. patens cDNA clone:pp... 36 1.9 2
(AC205688) Zea mays chromosome 1 clone CH201-44J2; ZMMBBc004... 40 1.9 3
(FF654528) G826P5260FF10.T0 Acorn worm normalized juvenile p... 44 1.9 2
(FG873928) UCRVU07_CCNP8780_b1 Cowpea UCR 779 Mixed Tissue a... 32 1.9 2
(FG873568) UCRVU07_CCNP8586_b1 Cowpea UCR 779 Mixed Tissue a... 32 1.9 2
(AF091603) Naegleria gruberi nucleolar basal body binding pr... 26 1.9 5
(EE114416) G613P6123RH10.T0 Acorn worm blastula/gastrula pCM... 44 1.9 2
(FF672650) G826P5399FC6.T0 Acorn worm normalized juvenile pE... 44 1.9 2
(FF616324) G825P5191FG2.T0 Acorn worm normalized gastrula pE... 44 2.0 2
(AW186978) BNLGHi8291 Six-day Cotton fiber Gossypium hirsutu... 38 2.0 2
(BJ609900) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.0 2
(EC970864) WIN102.C21_P03 Muscat Hamburg post-veraison peric... 32 2.0 2
(EE122507) G709P5219FC11.T0 Acorn worm normalized neurula pE... 44 2.0 2
(FF605809) G825P5124FE5.T0 Acorn worm normalized gastrula pE... 44 2.0 2
(CB264231) 78-E014996-035-003-L20-T7R MPIZ-ADIS-035 Arabidop... 44 2.0 2
(CK052822) 62638rsicek_7164.y1 Oryza sativa cv. PA64s panicl... 38 2.0 2
(EX970939) CAGO5381.rev CAGO Karenia brevis Karbr Stressed (... 38 2.0 2
(EE117778) G709P5189RD4.T0 Acorn worm normalized neurula pEx... 44 2.0 2
(EE118042) G709P5219RC11.T0 Acorn worm normalized neurula pE... 44 2.0 2
(EE116902) G708P561RC6.T0 Acorn worm normalized gastrula pEx... 44 2.0 2
(EB367667) nba21c12.y1 Guinea pig eye minus retina and lens.... 42 2.0 2
(DE225199) Trifolium pratense DNA, clone:RCG17262. 38 2.0 2
(EE119097) G710P5209RB8.T0 Acorn worm normalized juvenile pE... 44 2.0 2
(EE122319) G708P525FC11.T0 Acorn worm normalized gastrula pE... 44 2.0 2
(BJ168944) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.0 2
(EE122855) G710P5215FB1.T0 Acorn worm normalized juvenile pE... 44 2.1 2
(FF633707) G825P561RB5.T0 Acorn worm normalized gastrula pEx... 44 2.1 2
(CN916667) 030108ABPB001390HT (ABPB) M9 root tips Malus x do... 38 2.1 2
(DJ303335) Method for identification of useful proteins deri... 38 2.1 2
(EE117341) G709P5130RE10.T0 Acorn worm normalized neurula pE... 44 2.1 2
(FF650116) G826P5234RB5.T0 Acorn worm normalized juvenile pE... 44 2.1 2
(EE118663) G709P573RG9.T0 Acorn worm normalized neurula pExp... 44 2.1 2
(FF672412) G826P5397RF7.T0 Acorn worm normalized juvenile pE... 44 2.2 2
(BQ524571) NISC_no05g09.y1 NICHD_XGC_Emb8 Xenopus (Silurana)... 38 2.2 2
(DX151481) OG_ABa0189G04.f OG_ABa Oryza granulata genomic cl... 42 2.2 2
(AC207686) Zea mays chromosome 2 clone CH201-525E18; ZMMBBc0... 44 2.2 5
(EE117217) G709P5113RA12.T0 Acorn worm normalized neurula pE... 44 2.2 2
(EE121965) G710P5425RH3.T0 Acorn worm normalized juvenile pE... 44 2.2 2
(BG888189) EST514040 cSTD Solanum tuberosum cDNA clone cSTD9... 38 2.3 2
(BJ954325) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.3 2
(BJ165496) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.3 2
(FF613079) G825P5170RG3.T0 Acorn worm normalized gastrula pE... 44 2.3 2
(FC356154) CAYY29988.rev CAYY Physcomitrella patens subsp. p... 36 2.3 2
(BJ169285) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.3 2
(DX838687) ZMMBLh0015N14.f ZMMBLh Zea mays genomic clone ZMM... 36 2.3 2
(FG703968) G1144P37FM11.T0 Anolis carolinensis pooled normal... 42 2.3 2
(EK770912) 1093017114226 Global-Ocean-Sampling_GS-33-01-01-1... 38 2.3 2
(EG382116) BG01010A2G03.r1 BG01 - normalized library Leymus ... 38 2.3 2
(FC402287) CAYZ25042.fwd CAYZ Physcomitrella patens subsp. p... 36 2.3 2
(FC402286) CAYZ25042.rev CAYZ Physcomitrella patens subsp. p... 36 2.3 2
(DW477405) GH_RMIRS_008_D11_F Cotton Normalized Library rand... 38 2.3 2
(DX838650) ZMMBLh0015L14.f ZMMBLh Zea mays genomic clone ZMM... 36 2.3 2
(BJ594033) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.3 2
(EY044413) CAIY7235.fwd CAIY Artemisia annua leaf Artemisia ... 44 2.3 2
(AC177645) Strongylocentrotus purpuratus clone R3-1004H3, **... 46 2.4 4
(BJ953795) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.4 2
(BJ341983) Dictyostelium discoideum cDNA clone:dda9c06, 3' e... 38 2.4 2
(FE650820) CBYZ8865.g1 CBYZ Panicum virgatum Kanlow 4 day ol... 44 2.4 2
(CX341498) JGI_XZT45910.fwd NIH_XGC_tropTad5 Xenopus (Silura... 38 2.4 2
(EX970940) CAGO5381.fwd CAGO Karenia brevis Karbr Stressed (... 38 2.4 2
(DC924026) Physcomitrella patens subsp. patens cDNA, clone:p... 36 2.4 2
(EU850441) Philodina roseola dihydrogenpyrimidine dehydrogen... 34 2.4 5
(CT856366) Oryza sativa Indica Group EST sequence:OSIGCRN126... 38 2.4 3
(EG376395) BG01010A2G03.f1 BG01 - normalized library Leymus ... 38 2.5 2
(EH735987) CNMM9072.b1_O12.ab1 CNM(LMS) spotted knapweed Cen... 42 2.5 2
(AF091604) Naegleria gruberi nucleolar basal body binding pr... 26 2.5 5
(FE650819) CBYZ8865.b1 CBYZ Panicum virgatum Kanlow 4 day ol... 44 2.5 2
(EY044412) CAIY7235.rev CAIY Artemisia annua leaf Artemisia ... 44 2.5 2
(CX331822) JGI_XZT17298.fwd NIH_XGC_tropTad5 Xenopus (Silura... 38 2.5 2
(CX367067) JGI_XZT30554.fwd NIH_XGC_tropTad5 Xenopus (Silura... 38 2.5 2
(DW480348) GH_RMIRS_024_H04_009_F Cotton Normalized Library ... 38 2.5 2
(CX368206) JGI_XZT31369.fwd NIH_XGC_tropTad5 Xenopus (Silura... 38 2.5 2
(BJ975187) Physcomitrella patens subsp. patens cDNA clone:pp... 36 2.6 2
(EC687777) JBE00003474 Jakoba bahamiensis Home made, regular... 42 2.6 2
(FC392504) CAYZ19096.rev CAYZ Physcomitrella patens subsp. p... 36 2.6 2
(CX402812) JGI_XZT50051.fwd NIH_XGC_tropTad5 Xenopus (Silura... 38 2.6 2
(DT392745) JGI_CABH9500.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 38 2.6 2
(DW477406) GH_RMIRS_008_D11_R Cotton Normalized Library rand... 38 2.6 2
(DW480349) GH_RMIRS_024_H04_R Cotton Normalized Library rand... 38 2.6 2
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 38 2.7 7
(EY368614) CAXA11909.fwd CAXA Helobdella robusta Subtracted ... 42 2.7 2
(DT531381) JGI_CABH3862.rev NIH_XGC_tropSkeMus1 Xenopus (Sil... 38 2.7 2
(BP957158) Euphorbia tirucalli mRNA, clone: ETC088C12, 5' end. 36 2.7 3
(BT043565) Salmo salar clone HM4_2326 calsequestrin-like mRN... 46 2.8 1
(AL395657) T7 end of clone AR0AA025D03 of library AR0AA from... 46 2.8 1
(BX883043) Rattus norvegicus chromosome 20, major histocompa... 46 2.8 1
(AC127264) Mus musculus BAC clone RP24-336J13 from chromosom... 46 2.8 1
(AC126046) Mus musculus BAC clone RP23-176P24 from chromosom... 46 2.8 1
(AC120734) Rattus norvegicus BAC CH230-220D1 (Children's Ho... 46 2.8 1
(X88900) C.tropicalis HAL3 gene. 46 2.8 1
(EF592211) Mangifera indica clone MiIIHR31 microsatellite se... 46 2.8 1
(DQ521451) Hydrangea macrophylla microsatellite STAB111_112 ... 46 2.8 1
(DQ513232) Populus trichocarpa clone 2829884 NBS-NBS-LRR typ... 46 2.8 1
(CU469560) Medicago truncatula chromosome 5 clone mth4-3g17,... 46 2.8 1
(CR382132) Yarrowia lipolytica strain CLIB122 chromosome F c... 46 2.8 1
(CP001142) Phaeodactylum tricornutum CCAP 1055/1 chromosome ... 46 2.8 1
(CP000600) Ostreococcus lucimarinus CCE9901 chromosome 20, c... 46 2.8 1
(CP000584) Ostreococcus lucimarinus CCE9901 chromosome 4, co... 46 2.8 1
(AP006497) Cyanidioschyzon merolae DNA, chromosome 15, compl... 46 2.8 1
(AP006493) Cyanidioschyzon merolae DNA, chromosome 11, compl... 46 2.8 1
(AK119749) Oryza sativa Japonica Group cDNA clone:002-165-H1... 46 2.8 1
(AF231778) Pinus taeda clone LC15c10 microsatellite sequence. 46 2.8 1
(AE016818) Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 46 2.8 1
(AE016814) Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 46 2.8 1
(EA240360) Sequence 104675 from patent US 7214786. 46 2.8 1
(EA144450) Sequence 8765 from patent US 7214786. 46 2.8 1
(DJ490879) Method for evaluating physiological condition of ... 46 2.8 1
(DJ210638) Method for identification of useful proteins deri... 46 2.8 1
(DJ207961) Method for identification of useful proteins deri... 46 2.8 1
(J03766) Canine cardiac calsequestrin mRNA, complete cds. 46 2.8 1
(U42846) Caenorhabditis elegans cosmid T19D2, complete seque... 46 2.8 1
(EF158102) Plasmodium falciparum erythrocyte membrane protei... 46 2.8 1
(AY961504) Lysiphlebus testaceipes ribosomal protein P2 isof... 46 2.8 1
(AY239359) Anopheles gambiae strain G3 dicer-1 mRNA, complet... 46 2.8 1
(AY189724) Penaeus monodon clone t13646 microsatellite seque... 46 2.8 1
(AM181674) Drosophila tristis intron sequence (y gene). 46 2.8 1
(AC112180) Homo sapiens chromosome 5 clone RP11-130F17, comp... 46 2.8 1
(AC010276) Homo sapiens chromosome 5 clone CTC-504A5, comple... 46 2.8 1
(AC144390) Rattus norvegicus clone CH230-2K8, *** SEQUENCING... 46 2.8 1
(AC141788) Apis mellifera clone CH224-59E4, WORKING DRAFT SE... 46 2.8 1
(AC141662) Apis mellifera clone CH224-54J17, WORKING DRAFT S... 46 2.8 1
(AC141029) Rattus norvegicus clone CH230-477P3, WORKING DRAF... 46 2.8 1
(AC137282) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 2.8 1
(AC137209) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 2.8 1

>(BJ436714) Dictyostelium discoideum cDNA clone:ddv32c06, 3' end,
single read.
Length = 761

Score = 848 bits (428), Expect(3) = 0.0
Identities = 428/428 (100%)
Strand = Plus / Minus


Query: 1 aaaaaataattcgatagaggcaaactctttgaaaagtgatgaaggttctcttttgaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aaaaaataattcgatagaggcaaactctttgaaaagtgatgaaggttctcttttgaattc 702


Query: 61 aataaaacgaggatattcattaaaagcagttccagagaaattaaaagaagaagccaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aataaaacgaggatattcattaaaagcagttccagagaaattaaaagaagaagccaaaac 642


Query: 121 tattgataatctttctgcacaattaataaattctctaagtcgtagaagagtagctattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tattgataatctttctgcacaattaataaattctctaagtcgtagaagagtagctattga 582


Query: 181 ttgtattgaaaatgacgaagacgacgacgacgatgatgcttggtcagacgaaccagtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttgtattgaaaatgacgaagacgacgacgacgatgatgcttggtcagacgaaccagtaaa 522


Query: 241 gaaaggaggaagtggtggcggcggtagtggaagttcatactcttttggaggtgtacccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaaaggaggaagtggtggcggcggtagtggaagttcatactcttttggaggtgtacccaa 462


Query: 301 tgctattacttctcttgttacagcttcttctactcctgcttcctatttagcagccaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgctattacttctcttgttacagcttcttctactcctgcttcctatttagcagccaaatc 402


Query: 361 tcaaccaaaagacgaagaagaagagtggggtgatgaagatatgggttttgatctttttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcaaccaaaagacgaagaagaagagtggggtgatgaagatatgggttttgatctttttgg 342


Query: 421 tgactatc 428
||||||||
Sbjct: 341 tgactatc 334

Score = 400 bits (202), Expect(3) = 0.0
Identities = 202/202 (100%)
Strand = Plus / Minus


Query: 505 ggaatcatatgatgaagatgaagacatgggatttggtctttttggtgatgaagaagatta 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggaatcatatgatgaagatgaagacatgggatttggtctttttggtgatgaagaagatta 198


Query: 565 tcaattacaaagggtattgtctcaatccttatatgaatcaaaacaaatacaaccacaaca 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcaattacaaagggtattgtctcaatccttatatgaatcaaaacaaatacaaccacaaca 138


Query: 625 accaaaatcaggaccacaaaaagaacaagaagagtctgatggagaaggggattgtggttt 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 accaaaatcaggaccacaaaaagaacaagaagagtctgatggagaaggggattgtggttt 78


Query: 685 tggattatttggcgaatacgat 706
||||||||||||||||||||||
Sbjct: 77 tggattatttggcgaatacgat 56

Score = 109 bits (55), Expect(3) = 0.0
Identities = 55/55 (100%)
Strand = Plus / Minus


Query: 708 attattgtccaccaccaccaaagtcacaaccacaaccacagctacaatctcaaaa 762
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 attattgtccaccaccaccaaagtcacaaccacaaccacagctacaatctcaaaa 1

Score = 44.1 bits (22), Expect(2) = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus


Query: 782 aaagaacaagaagagtctgatg 803
||||||||||||||||||||||
Sbjct: 118 aaagaacaagaagagtctgatg 97

Score = 40.1 bits (20), Expect(2) = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus


Query: 521 gatgaagacatgggatttggtctttttggtga 552
|||||||| ||||| |||| ||||||||||||
Sbjct: 370 gatgaagatatgggttttgatctttttggtga 339

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,172,176,224
Number of extensions: 80157611
Number of successful extensions: 7466721
Number of sequences better than 10.0: 1203
Length of query: 1101
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1077
Effective length of database: 96,409,374,237
Effective search space: 103832896053249
Effective search space used: 103832896053249
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.20
Homology vs Protein
Query= Contig-U15987-1 (Contig-U15987-1Q) /CSM_Contig/Contig-U15987-1Q.Seq.d
(1101 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC006413_3(AC006413|pid:none) Arabidopsis thaliana chromosome 2 ... 35 6.1

>AC006413_3(AC006413|pid:none) Arabidopsis thaliana chromosome 2 clone
F5K7 map ve013, complete sequence. &B84476(B84476)
Length = 1115

Score = 34.7 bits (78), Expect = 6.1
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2

Query: 572 QRVLSQSLYESKQIQPQQPKSGPQKEQEESDGE 670
+R LS S E + ++ P S PQKE+EES+GE
Sbjct: 1067 RRALSSSDEEGELMEESHPNSSPQKEKEESNGE 1099

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,023,294,351
Number of extensions: 12458804
Number of successful extensions: 42806
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42696
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 237
Effective length of database: 630,428,194
Effective search space: 149411481978
Effective search space used: 149411481978
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.82 gvh: 0.48 alm: 0.30 top: 0.60 tms: 0.07 mit: 0.40 mip: 0.09
nuc: 0.00 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.08 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

28.0 %: nuclear
24.0 %: mitochondrial
24.0 %: cytoplasmic
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U15987-1 is nuc

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0