Contig-U15975-1
Contig ID Contig-U15975-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15975-1 (Contig-U15975-1Q) /CSM_Contig/Contig-U15975-1Q.Seq.d
TTTTCACCTATTCTTAATGCTTTAACTGCTGCATTATTTGGATCTGCAAA
TTTTTGAAATTGTGGATTATGACACACAATATTTTGAATGCATAAAGTAA
TTTCTGCTGAACACCCTCTAGTTATTTGAAGAAAGTATTGTTCAATAATG
AATCTAAGCCTTTCTTTCTCTTTCTCTAAACTTTCATTTGACATTGAGTT
TTTATGTGGTATTGGTGGTGATTTTGACATTTTGTACATATATTATATAT
TGAGTTTAAACAAAAAAAAAAAAAAAAAAAAAAAGTATATATACAATATA
TTGGATATATGTGTAATATATGTATACTGTATACTATATACTATATATAC
TATATATACAATATTTATGTATATAAATATATATGAATATAAAATACAAT
GTTTATTCTTTGATTTTGTTTATATTACTATTGTTATTATTAGTTATTTC
TATTTACAAAGGTGGGAGGGTCGAAATTGTTGTTTTTTTATTATTTTTTT
TTTTTTTATTTTTTATTTTTTT----------AATCAATTAGTAAACAAT
TTGCTCCATTTTTTAAAGGTTTCAGAATGGTTTGTGATTCACCAATTTTA
AAGATTTTAAAACCCGAAGAATTGGGTAATTTGGTTTGTGGTGTTGAAGA
TTTAAATTTCATTGAATTAGAACGTGGTACAAATTATGAAGGTGGTTATA
CTCAAGATGATACAACTATAAAAAATTTTTGGAAGGTTTTACATGGTTTA
TCAGACGAAGATAAAAGGAGATTTTTAACTTTTGTAACAGGTGGTGATAG
AGTGCCTTATGGTGGTTTAGAGAAAATGAGTTTTACAATCACAAAAACTG
CCGATAGTGATAGATTACCATCAGCACATACATGTTTCAATACCTTAATT
TTACCAGCATATCCAGAATTTGAAAAACTAAGAGATCTCTTAACTAAAGC
TTTAACTCATTATGAAGGTTTTGGTCTTAAATAATAAAAATGTTTAATAA
AAATAAAATAATAAATAATAAATAAATAATAAAATAAAGTTGCAATATCA
TAAAAAAAAATAAAAAATAAAAAACTAAAAAAAAAAAAACTAAAAAATAA
AAATAAAAATCATTCATTGAATAGAAAAAA

Gap gap included
Contig length 1120
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 3706190
End point 3705319
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U15975
List of clone(s)

est1=FC-AN02F,1,522
est2=CHP437Z,12,151
est3=FC-AN02Z,523,1120
Translated Amino Acid sequence
fspilnaltaalfgsanf*ncgl*htif*mhkvisaehplvi*RKYCSIMNLSLSFSFSK
LSFDIEFLCGIGGDFDILYIYYILSLNKKKKKKKKYIYNILDICVIYVYCILYTIYTIYT
IFMYINIYEYKIQCLFFDFVYITIVIISYFYLQRWEGRNCCFFIIFFFFIFYFF---

---SISKQFAPFFKGFRMVCDSPILKILKPEELGNLVCGVEDLNFIELERGTNYEGGYTQ
DDTTIKNFWKVLHGLSDEDKRRFLTFVTGGDRVPYGGLEKMSFTITKTADSDRLPSAHTC
FNTLILPAYPEFEKLRDLLTKALTHYEGFGLK**kclikik**iink**nkvais*kkik
nkklkkkklknknknhslnrk


Translated Amino Acid sequence (All Frames)
Frame A:
fspilnaltaalfgsanf*ncgl*htif*mhkvisaehplvi*RKYCSIMNLSLSFSFSK
LSFDIEFLCGIGGDFDILYIYYILSLNKKKKKKKKYIYNILDICVIYVYCILYTIYTIYT
IFMYINIYEYKIQCLFFDFVYITIVIISYFYLQRWEGRNCCFFIIFFFFIFYFF---

---nqlvnnllhflkvsewfvihqf*rf*npknwviwfvvlki*isln*nvvqimkvvil
kmiql*kifgrfymvyqtkikgdf*ll*qvvieclmvv*rk*vlqsqklpividyhqhih
vsip*fyqhiqnlkn*eis*lkl*limkvlvlnnknv**k*nnk**innkiklqyhkkk*
kikn*kkkn*kikikiih*iek

Frame B:
fhlflml*llhyldlqifeivdydtqyfecik*fllntl*lfeesivq**i*aflslsln
fhltlsfyvvlvviltfctyiiy*v*tkkkkkkksiytiywiyv*ymytvyyilyilyiq
ylci*iymnikynvyslilfillllllvisiykggrveivvfllfffflffif---

---in**ticsif*rfqngl*ftnfkdfktrrig*fglwc*rfkfh*irtwykl*rwlys
r*ynykkflegftwfirrr*keifnfcnrw**salwwfrenefynhkncr***itistym
fqylnftsisri*ktkrsln*sfnsl*rfws*iikmfnknkiinnk*iik*scniikknk
k*ktkkkktkk*k*ksfie*kk

Frame C:
ftys*cfncciiwickflklwimthnilna*snfc*tpssylkkvlfnneskpfflfl*t
fi*h*vfmwyww*f*hfvhilyiefkqkkkkkkkvyiqyigymcnicilytiyyiyyiyn
iyvykyi*i*ntmfil*fclyyycyy*lflftkvggskllffyyffffyflff---

---SISKQFAPFFKGFRMVCDSPILKILKPEELGNLVCGVEDLNFIELERGTNYEGGYTQ
DDTTIKNFWKVLHGLSDEDKRRFLTFVTGGDRVPYGGLEKMSFTITKTADSDRLPSAHTC
FNTLILPAYPEFEKLRDLLTKALTHYEGFGLK**kclikik**iink**nkvais*kkik
nkklkkkklknknknhslnrk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15975-1 (Contig-U15975-1Q)
/CSM_Contig/Contig-U15975-1Q.Seq.d
(1130 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15975-1 (Contig-U15975-1Q) /CSM_Contig/Conti... 882 0.0
Contig-U08875-1 (Contig-U08875-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U16107-1 (Contig-U16107-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U16087-1 (Contig-U16087-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U15722-1 (Contig-U15722-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U15594-1 (Contig-U15594-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U15513-1 (Contig-U15513-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U14986-1 (Contig-U14986-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U14762-1 (Contig-U14762-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U14159-1 (Contig-U14159-1Q) /CSM_Contig/Conti... 40 0.007

>Contig-U15975-1 (Contig-U15975-1Q) /CSM_Contig/Contig-U15975-1Q.Seq.d
Length = 1130

Score = 882 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Plus


Query: 533 aatcaattagtaaacaatttgctccattttttaaaggtttcagaatggtttgtgattcac 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aatcaattagtaaacaatttgctccattttttaaaggtttcagaatggtttgtgattcac 592


Query: 593 caattttaaagattttaaaacccgaagaattgggtaatttggtttgtggtgttgaagatt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caattttaaagattttaaaacccgaagaattgggtaatttggtttgtggtgttgaagatt 652


Query: 653 taaatttcattgaattagaacgtggtacaaattatgaaggtggttatactcaagatgata 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 taaatttcattgaattagaacgtggtacaaattatgaaggtggttatactcaagatgata 712


Query: 713 caactataaaaaatttttggaaggttttacatggtttatcagacgaagataaaaggagat 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 caactataaaaaatttttggaaggttttacatggtttatcagacgaagataaaaggagat 772


Query: 773 ttttaacttttgtaacaggtggtgatagagtgccttatggtggtttagagaaaatgagtt 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ttttaacttttgtaacaggtggtgatagagtgccttatggtggtttagagaaaatgagtt 832


Query: 833 ttacaatcacaaaaactgccgatagtgatagattaccatcagcacatacatgtttcaata 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ttacaatcacaaaaactgccgatagtgatagattaccatcagcacatacatgtttcaata 892


Query: 893 ccttaattttaccagcatatccagaatttgaaaaactaagagatctcttaactaaagctt 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 ccttaattttaccagcatatccagaatttgaaaaactaagagatctcttaactaaagctt 952


Query: 953 taactcattatgaaggttttggtct 977
|||||||||||||||||||||||||
Sbjct: 953 taactcattatgaaggttttggtct 977


Score = 517 bits (261), Expect = e-146
Identities = 261/261 (100%)
Strand = Plus / Plus


Query: 1 ttttcacctattcttaatgctttaactgctgcattatttggatctgcaaatttttgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttcacctattcttaatgctttaactgctgcattatttggatctgcaaatttttgaaat 60


Query: 61 tgtggattatgacacacaatattttgaatgcataaagtaatttctgctgaacaccctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtggattatgacacacaatattttgaatgcataaagtaatttctgctgaacaccctcta 120


Query: 121 gttatttgaagaaagtattgttcaataatgaatctaagcctttctttctctttctctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttatttgaagaaagtattgttcaataatgaatctaagcctttctttctctttctctaaa 180


Query: 181 ctttcatttgacattgagtttttatgtggtattggtggtgattttgacattttgtacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctttcatttgacattgagtttttatgtggtattggtggtgattttgacattttgtacata 240


Query: 241 tattatatattgagtttaaac 261
|||||||||||||||||||||
Sbjct: 241 tattatatattgagtttaaac 261


Score = 170 bits (86), Expect = 3e-42
Identities = 86/86 (100%)
Strand = Plus / Plus


Query: 397 caatgtttattctttgattttgtttatattactattgttattattagttatttctattta 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caatgtttattctttgattttgtttatattactattgttattattagttatttctattta 456


Query: 457 caaaggtgggagggtcgaaattgttg 482
||||||||||||||||||||||||||
Sbjct: 457 caaaggtgggagggtcgaaattgttg 482


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1110 tcattcattgaatagaaaaaa 1130
|||||||||||||||||||||
Sbjct: 1110 tcattcattgaatagaaaaaa 1130


>Contig-U08875-1 (Contig-U08875-1Q) /CSM_Contig/Contig-U08875-1Q.Seq.d
Length = 1355

Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus


Query: 413 attttgtttatattactattgttattatta 442
||||| |||||||||||||| |||||||||
Sbjct: 84 attttatttatattactattattattatta 55


>Contig-U16107-1 (Contig-U16107-1Q) /CSM_Contig/Contig-U16107-1Q.Seq.d
Length = 2353

Score = 40.1 bits (20), Expect = 0.007
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 423 tattactattgttattatta 442
||||||||||||||||||||
Sbjct: 31 tattactattgttattatta 12


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,034
Number of Sequences: 8402
Number of extensions: 18034
Number of successful extensions: 2708
Number of sequences better than 10.0: 489
length of query: 1130
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1114
effective length of database: 7,941,110
effective search space: 8846396540
effective search space used: 8846396540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 3. 6
Homology vs DNA
Query= Contig-U15975-1 (Contig-U15975-1Q) /CSM_Contig/Contig-U15975-1Q.Seq.d
(1130 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C22982) Dictyostelium discoideum gamete cDNA, clone FC-AN02. 882 0.0 1
(C22983) Dictyostelium discoideum gamete cDNA, clone FC-AN02. 307 e-127 5
(BJ383250) Dictyostelium discoideum cDNA clone:ddc52j10, 3' ... 121 9e-34 2
(AC209123) Saimiri boliviensis boliviensis clone CH254-131B9... 36 0.030 2
(CR382139) Debaryomyces hansenii strain CBS767 chromosome G ... 50 0.18 1
(AL078591) Human DNA sequence from clone RP1-198I9 on chromo... 50 0.18 1
(AC024971) Homo sapiens chromosome 6 clone RP11-29F4 map 6, ... 50 0.18 1
(EG327178) EST_986 Caste=Queen, Stage=Adult Vespula squamosa... 38 0.53 2
(EF137867) Danio rerio ectodysplasin receptor (edar) mRNA, c... 48 0.72 1
(AC147632) Mus musculus BAC clone RP23-326H18 from chromosom... 48 0.72 1
(AC121934) Mus musculus BAC clone RP24-207A18 from chromosom... 48 0.72 1
(EB786120) 6942864 KZ69 Danio rerio cDNA clone 2690285, mRNA... 48 0.72 1
(FC846746) CBHN4389.rev CBHN Metridium senile tentacle Metri... 48 0.72 1
(EJ465893) 1095403007692 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.73 2
(CG873683) ZMMBBc0283N02f ZMMBBc (EcoRI) Zea mays subsp. may... 38 0.88 2
(AC168568) Strongylocentrotus purpuratus clone R3-3065P19, W... 40 2.1 4
(AM482022) Vitis vinifera contig VV78X092291.6, whole genome... 46 2.9 1
(ER372037) 1093025062047 Global-Ocean-Sampling_GS-34-01-01-1... 46 2.9 1
(DY528524) BAAC-PNP1306K19.g2 C.remanei EST SB146 Caenorhabd... 46 2.9 1
(DT936666) BAAC-PNP1284O13.g1 C.remanei EST SB146 Caenorhabd... 46 2.9 1
(DT936472) BAAC-PNP1284F23.g1 C.remanei EST SB146 Caenorhabd... 46 2.9 1
(DR779624) BAAC-PNP1260H18.g1 C.remanei EST SB146 Caenorhabd... 46 2.9 1
(DR407189) mhm86a05.b1 C.remanei EST SB146 Caenorhabditis re... 46 2.9 1
(AU072068) Dictyostelium discoideum slug cDNA, clone SSD333. 46 2.9 1
(CA175224) SCJFST1017G04.g ST1 Saccharum officinarum cDNA cl... 46 2.9 1
(BP829744) Arabidopsis thaliana cDNA clone:RAFL22-83-A10, 5'... 46 2.9 1
(CP000393) Trichodesmium erythraeum IMS101, complete genome. 46 2.9 1
(AC177336) Strongylocentrotus purpuratus clone R3-46L23, WOR... 36 3.4 5
(AC229836) Monodelphis domestica clone VMRC18-748P7, WORKING... 38 4.8 6
(AC195023) Colobus guereza clone CH272-130B12, WORKING DRAFT... 34 5.3 2
(AC169805) Rhesus Macaque CHR14 BAC CH250-14P20 (Children's ... 34 5.3 2
(AC193283) Colobus guereza clone CH272-144I1, WORKING DRAFT ... 34 5.3 2
(AC151018) Callithrix jacchus clone CH259-222L21, WORKING DR... 34 5.3 2
(AC149010) Papio anubis clone RP41-189O24, WORKING DRAFT SEQ... 34 5.4 2
(AC149122) Papio anubis clone RP41-70P1, WORKING DRAFT SEQUE... 34 5.4 2
(CR376852) Zebrafish DNA sequence from clone CH211-181B18 in... 32 5.4 2
(AC208803) Zea mays chromosome 2 clone ZMMBBb-504A2; ZMMBBb0... 34 6.0 4
(DH230582) Oryzias latipes Fosmid clone:GOLWFno563_k09, forw... 40 6.2 2
(FK380654) 454GmaGlobSeed115286 Soybean Seeds Containing Glo... 34 7.7 2
(EY327358) CAWY12567.rev CAWY Helobdella robusta Subtracted ... 40 8.8 2
(AM477270) Vitis vinifera contig VV78X267063.4, whole genome... 38 9.1 2
(FG705117) G1144P312RK11.T0 Anolis carolinensis pooled norma... 40 9.7 2

>(C22982) Dictyostelium discoideum gamete cDNA, clone FC-AN02.
Length = 598

Score = 882 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Plus


Query: 533 aatcaattagtaaacaatttgctccattttttaaaggtttcagaatggtttgtgattcac 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcaattagtaaacaatttgctccattttttaaaggtttcagaatggtttgtgattcac 60


Query: 593 caattttaaagattttaaaacccgaagaattgggtaatttggtttgtggtgttgaagatt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caattttaaagattttaaaacccgaagaattgggtaatttggtttgtggtgttgaagatt 120


Query: 653 taaatttcattgaattagaacgtggtacaaattatgaaggtggttatactcaagatgata 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaatttcattgaattagaacgtggtacaaattatgaaggtggttatactcaagatgata 180


Query: 713 caactataaaaaatttttggaaggttttacatggtttatcagacgaagataaaaggagat 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caactataaaaaatttttggaaggttttacatggtttatcagacgaagataaaaggagat 240


Query: 773 ttttaacttttgtaacaggtggtgatagagtgccttatggtggtttagagaaaatgagtt 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttaacttttgtaacaggtggtgatagagtgccttatggtggtttagagaaaatgagtt 300


Query: 833 ttacaatcacaaaaactgccgatagtgatagattaccatcagcacatacatgtttcaata 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttacaatcacaaaaactgccgatagtgatagattaccatcagcacatacatgtttcaata 360


Query: 893 ccttaattttaccagcatatccagaatttgaaaaactaagagatctcttaactaaagctt 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttaattttaccagcatatccagaatttgaaaaactaagagatctcttaactaaagctt 420


Query: 953 taactcattatgaaggttttggtct 977
|||||||||||||||||||||||||
Sbjct: 421 taactcattatgaaggttttggtct 445

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,007,241,435
Number of extensions: 63512689
Number of successful extensions: 6054936
Number of sequences better than 10.0: 42
Length of query: 1130
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1106
Effective length of database: 96,409,374,237
Effective search space: 106628767906122
Effective search space used: 106628767906122
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.20
Homology vs Protein
Query= Contig-U15975-1 (Contig-U15975-1Q) /CSM_Contig/Contig-U15975-1Q.Seq.d
(1130 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AB194232_2(AB194232|pid:none) Homo sapiens mRNA for hypotherical... 156 1e-36
BC134678_1(BC134678|pid:none) Bos taurus ubiquitin protein ligas... 155 3e-36
AB179374_1(AB179374|pid:none) Macaca fascicularis testis cDNA cl... 154 4e-36
A38920(A38920;A48072;B48072) E6-associated protein - human (frag... 154 4e-36
X98021_1(X98021|pid:none) H.sapiens E6-AP gene exon 1 and joinin... 154 4e-36
CR860787_1(CR860787|pid:none) Pongo abelii mRNA; cDNA DKFZp459N1... 154 4e-36
BC009271_1(BC009271|pid:none) Homo sapiens ubiquitin protein lig... 154 4e-36
(Q9UEP9) RecName: Full=Ubiquitin-protein ligase E3A; EC... 154 4e-36
AF016708_1(AF016708|pid:none) Homo sapiens E6-AP ubiquitin-prote... 154 4e-36
BC002582_1(BC002582|pid:none) Homo sapiens ubiquitin protein lig... 154 6e-36
U82122_1(U82122|pid:none) Mus musculus E6-AP ubiquitin-protein l... 153 9e-36
AK220549_1(AK220549|pid:none) Mus musculus mRNA for mKIAA4216 pr... 153 9e-36
AF082835_1(AF082835|pid:none) Mus spretus E6-AP ubiquitin-protei... 153 9e-36
BC155156_1(BC155156|pid:none) Danio rerio ubiquitin protein liga... 152 2e-35
BT044049_1(BT044049|pid:none) Salmo salar clone HM4_0669 ubiquit... 152 2e-35
FN357652_3(FN357652|pid:none) Schistosoma mansoni genome sequenc... 151 4e-35
U96636_1(U96636|pid:none) Mus musculus E6-AP ubiquitin protein l... 150 6e-35
AF154109_1(AF154109|pid:none) Mya arenaria E3 ubiquitin-protein ... 150 8e-35
AE014296_2055(AE014296|pid:none) Drosophila melanogaster chromos... 150 8e-35
AY812705_1(AY812705|pid:none) Schistosoma japonicum SJCHGC06373 ... 148 4e-34
BC045002_1(BC045002|pid:none) Xenopus laevis ubiquitin protein l... 145 2e-33
CP001575_6(CP001575|pid:none) Micromonas sp. RCC299 chromosome 8... 142 2e-32
BX538351_62(BX538351|pid:none) Cryptosporidium parvum chromosome... 133 1e-29
BC153336_1(BC153336|pid:none) Xenopus tropicalis hypothetical pr... 129 1e-28
AY909448_1(AY909448|pid:none) Siniperca chuatsi clone C157 ubiqu... 129 1e-28
AM055942_98(AM055942|pid:none) Toxoplasma gondii RH, genomic DNA... 129 2e-28
(Q5U5R9) RecName: Full=Probable E3 ubiquitin-protein ligase HECT... 128 4e-28
AL161798_3(AL161798|pid:none) Human DNA sequence from clone RP11... 128 4e-28
FJ915074_1(FJ915074|pid:none) Danio rerio ubiquitin protein liga... 128 4e-28
BC137671_1(BC137671|pid:none) Mus musculus HECT domain containin... 126 2e-27
AJ851499_1(AJ851499|pid:none) Gallus gallus mRNA for hypothetica... 125 3e-27
BC073004_1(BC073004|pid:none) Xenopus laevis MGC82587 protein, m... 124 5e-27
BC084600_1(BC084600|pid:none) Xenopus laevis hypothetical LOC495... 124 6e-27
AL133551_9(AL133551|pid:none) Human DNA sequence from clone RP11... 121 4e-26
AK147723_1(AK147723|pid:none) Mus musculus melanocyte cDNA, RIKE... 121 4e-26
AB046813_1(AB046813|pid:none) Homo sapiens mRNA for KIAA1593 pro... 121 4e-26
BC047157_1(BC047157|pid:none) Mus musculus hect domain and RLD 4... 121 4e-26
AK145735_1(AK145735|pid:none) Mus musculus blastocyst blastocyst... 121 4e-26
(Q6PAV2) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 121 4e-26
BC060033_1(BC060033|pid:none) Mus musculus hect domain and RLD 4... 121 4e-26
AY650033_1(AY650033|pid:none) Homo sapiens HECT and RCC1 contain... 118 3e-25
AJ851682_1(AJ851682|pid:none) Gallus gallus mRNA for hypothetica... 117 6e-25
(Q15034) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 114 5e-24
B38919(B38919) hypothetical protein 2 - human (fragment) &D2521... 114 5e-24
AK296379_1(AK296379|pid:none) Homo sapiens cDNA FLJ58161 complet... 114 5e-24
AK296397_1(AK296397|pid:none) Homo sapiens cDNA FLJ50787 complet... 114 5e-24
AP007155_205(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 114 6e-24
BC145978_1(BC145978|pid:none) Mus musculus hect domain and RLD 3... 112 3e-23
BC042574_1(BC042574|pid:none) Mus musculus hect domain and RLD 3... 112 3e-23
AM920427_1104(AM920427|pid:none) Penicillium chrysogenum Wiscons... 111 4e-23
CR382125_980(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 107 6e-22
CU928181_120(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 107 8e-22
CP001331_276(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 107 8e-22
BC139897_1(BC139897|pid:none) Danio rerio zgc:163136, mRNA (cDNA... 106 1e-21
BX321880_5(BX321880|pid:none) Zebrafish DNA sequence from clone ... 106 1e-21
D85414_1(D85414|pid:none) Mus musculus mRNA, partial cds. 105 3e-21
U96635_1(U96635|pid:none) Mus musculus ubiquitin protein ligase ... 105 3e-21
(P46935) RecName: Full=E3 ubiquitin-protein ligase NEDD4; ... 105 3e-21
BC149081_1(BC149081|pid:none) Bos taurus hect domain and RLD 5, ... 105 4e-21
BC144285_1(BC144285|pid:none) Homo sapiens neural precursor cell... 105 4e-21
BC144284_1(BC144284|pid:none) Homo sapiens neural precursor cell... 105 4e-21
AB383746_1(AB383746|pid:none) Synthetic construct DNA, clone: pF... 105 4e-21
(P46934) RecName: Full=E3 ubiquitin-protein ligase NEDD4; ... 105 4e-21
AK292809_1(AK292809|pid:none) Homo sapiens cDNA FLJ77205 partial... 104 5e-21
(Q62940) RecName: Full=E3 ubiquitin-protein ligase NEDD4; ... 104 7e-21
AK304394_1(AK304394|pid:none) Homo sapiens cDNA FLJ54469 complet... 103 9e-21
(Q9UII4) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 102 3e-20
BC140716_1(BC140716|pid:none) Homo sapiens hect domain and RLD 5... 102 3e-20
BC075469_1(BC075469|pid:none) Xenopus tropicalis neural precurso... 101 6e-20
CU467858_2(CU467858|pid:none) Zebrafish DNA sequence from clone ... 100 7e-20
AB168451_1(AB168451|pid:none) Macaca fascicularis testis cDNA cl... 100 7e-20
AY814324_1(AY814324|pid:none) Schistosoma japonicum SJCHGC05577 ... 100 7e-20
BC074133_1(BC074133|pid:none) Xenopus laevis Nedd4 protein, mRNA... 100 9e-20
AJ000085_1(AJ000085|pid:none) Xenopus laevis mRNA for Nedd4 prot... 100 9e-20
(Q9NWS4) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 100 1e-19
BC035775_1(BC035775|pid:none) Homo sapiens hect domain and RLD 6... 100 1e-19
AY653201_1(AY653201|pid:none) Homo sapiens HERC6 splice variant ... 100 1e-19
AL833664_1(AL833664|pid:none) Homo sapiens mRNA; cDNA DKFZp667F2... 100 1e-19
AK097168_1(AK097168|pid:none) Homo sapiens cDNA FLJ39849 fis, cl... 100 1e-19
FN357622_11(FN357622|pid:none) Schistosoma mansoni genome sequen... 100 1e-19
BX284751_4(BX284751|pid:none) Neurospora crassa DNA linkage grou... 99 2e-19
BC063505_1(BC063505|pid:none) Homo sapiens HECT, UBA and WWE dom... 99 3e-19
AY772009_1(AY772009|pid:none) Homo sapiens ARF-binding protein 1... 99 3e-19
AB025966_1(AB025966|pid:none) Mus musculus mRNA for KIAA312p, pa... 99 3e-19
BC079665_1(BC079665|pid:none) Mus musculus HECT, UBA and WWE dom... 99 3e-19
AY772010_1(AY772010|pid:none) Mus musculus ARF-binding protein 1... 99 3e-19
AL592046_2(AL592046|pid:none) Human DNA sequence from clone RP11... 99 3e-19
AE014296_3095(AE014296|pid:none) Drosophila melanogaster chromos... 99 3e-19
AL672180_2(AL672180|pid:none) Mouse DNA sequence from clone RP23... 99 3e-19
AK017415_1(AK017415|pid:none) Mus musculus 6 days neonate head c... 99 3e-19
BC002602_1(BC002602|pid:none) Homo sapiens HECT, UBA and WWE dom... 99 3e-19
AB071605_1(AB071605|pid:none) Homo sapiens mRNA for HECT domain ... 99 3e-19
(P51593) RecName: Full=E3 ubiquitin-protein ligase HUWE1; ... 99 3e-19
BT072825_1(BT072825|pid:none) Drosophila melanogaster MIP03063 f... 99 3e-19
(Q9R0P2) RecName: Full=E3 ubiquitin-protein ligase HUWE1; ... 99 3e-19
AL592046_3(AL592046|pid:none) Human DNA sequence from clone RP11... 99 3e-19
AE014296_3098(AE014296|pid:none) Drosophila melanogaster chromos... 99 3e-19
AE014296_3101(AE014296|pid:none) Drosophila melanogaster chromos... 99 3e-19
AB093227_1(AB093227|pid:none) Mus musculus mRNA for mKIAA0312 pr... 99 3e-19
BC017642_1(BC017642|pid:none) Mus musculus HECT, UBA and WWE dom... 99 3e-19
CU928169_286(CU928169|pid:none) Kluyveromyces thermotolerans str... 99 3e-19
AL672180_1(AL672180|pid:none) Mouse DNA sequence from clone RP23... 99 3e-19
(Q9VVI3) RecName: Full=E3 ubiquitin-protein ligase Nedd-4; ... 99 3e-19
BC107576_1(BC107576|pid:none) Homo sapiens HECT, UBA and WWE dom... 99 3e-19
AY058619_1(AY058619|pid:none) Drosophila melanogaster LD31220 fu... 99 3e-19
AE014298_2291(AE014298|pid:none) Drosophila melanogaster chromos... 99 4e-19
FM992689_763(FM992689|pid:none) Candida dubliniensis CD36 chromo... 99 4e-19
AE017348_371(AE017348|pid:none) Cryptococcus neoformans var. neo... 99 4e-19
CR382138_509(CR382138|pid:none) Debaryomyces hansenii strain CBS... 99 4e-19
BC061798_1(BC061798|pid:none) Rattus norvegicus neural precursor... 98 6e-19
AB071179_1(AB071179|pid:none) Homo sapiens NEDL3 mRNA for NEDD4-... 98 6e-19
AB385335_1(AB385335|pid:none) Synthetic construct DNA, clone: pF... 98 6e-19
AY312514_1(AY312514|pid:none) Homo sapiens NEDD4.2 mRNA, complet... 98 6e-19
AF277232_1(AF277232|pid:none) Mus musculus ubiquitin-protein lig... 98 6e-19
AF210730_1(AF210730|pid:none) Homo sapiens NEDD4La (NEDD4La) mRN... 98 6e-19
AL137469_1(AL137469|pid:none) Homo sapiens mRNA; cDNA DKFZp434P2... 98 6e-19
AK163497_1(AK163497|pid:none) Mus musculus adult male corpora qu... 98 6e-19
BC108125_1(BC108125|pid:none) Bos taurus neural precursor cell e... 98 6e-19
BC086371_1(BC086371|pid:none) Rattus norvegicus neural precursor... 98 6e-19
(Q9H2W4) RecName: Full=E3 ubiquitin-protein ligase NEDD4-like; ... 98 6e-19
AK300444_1(AK300444|pid:none) Homo sapiens cDNA FLJ53199 complet... 98 6e-19
AY112984_1(AY112984|pid:none) Homo sapiens ubiquitin ligase NEDD... 98 6e-19
BC000621_1(BC000621|pid:none) Homo sapiens neural precursor cell... 98 6e-19
(Q8CFI0) RecName: Full=E3 ubiquitin-protein ligase NEDD4-like; ... 98 6e-19
BC032597_1(BC032597|pid:none) Homo sapiens neural precursor cell... 98 6e-19
CU633455_57(CU633455|pid:none) Podospora anserina genomic DNA ch... 97 8e-19
AP007161_776(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 97 8e-19
AM270158_8(AM270158|pid:none) Aspergillus niger contig An08c0030... 97 8e-19
(Q757T0) RecName: Full=Probable E3 ubiquitin-protein ligase HUL4... 97 8e-19
BX908812_22(BX908812|pid:none) Neurospora crassa DNA linkage gro... 97 8e-19
AK223167_1(AK223167|pid:none) Homo sapiens mRNA for E3 ubiquitin... 97 1e-18
CP000498_377(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 97 1e-18
CR382136_163(CR382136|pid:none) Debaryomyces hansenii strain CBS... 97 1e-18
AM920431_276(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 97 1e-18
AP008218_762(AP008218|pid:none) Oryza sativa (japonica cultivar-... 96 2e-18
AC025724_1(AC025724|pid:none) Caenorhabditis elegans cosmid Y67D... 96 2e-18
CR380955_65(CR380955|pid:none) Candida glabrata strain CBS138 ch... 96 2e-18
CR382131_741(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 96 2e-18
BT069675_1(BT069675|pid:none) Zea mays full-length cDNA clone ZM... 96 3e-18
CU928179_787(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 95 4e-18
AK300266_1(AK300266|pid:none) Homo sapiens cDNA FLJ59755 complet... 94 7e-18
AB169379_1(AB169379|pid:none) Macaca fascicularis testis cDNA, c... 94 7e-18
AK295070_1(AK295070|pid:none) Homo sapiens cDNA FLJ55539 complet... 94 7e-18
CR382125_591(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 94 7e-18
U96114_1(U96114|pid:none) Homo sapiens Nedd-4-like ubiquitin-pro... 94 7e-18
AC025721_10(AC025721|pid:none) Caenorhabditis elegans cosmid Y48... 94 9e-18
AK295701_1(AK295701|pid:none) Homo sapiens cDNA FLJ55648 complet... 94 9e-18
CR382139_244(CR382139|pid:none) Debaryomyces hansenii strain CBS... 94 1e-17
(P39940) RecName: Full=E3 ubiquitin-protein ligase RSP5; ... 94 1e-17
CU928180_594(CU928180|pid:none) Kluyveromyces thermotolerans str... 93 2e-17
CP000496_190(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 93 2e-17
(Q8C863) RecName: Full=E3 ubiquitin-protein ligase Itchy; ... 92 3e-17
AK220164_1(AK220164|pid:none) Mus musculus mRNA for mKIAA4011 pr... 92 3e-17
AJ851473_1(AJ851473|pid:none) Gallus gallus mRNA for hypothetica... 92 3e-17
CR380957_267(CR380957|pid:none) Candida glabrata strain CBS138 c... 92 3e-17
AF037454_1(AF037454|pid:none) Mus musculus ubiquitin protein lig... 92 3e-17
BC133288_1(BC133288|pid:none) Bos taurus WW domain containing E3... 92 3e-17
AY600518_1(AY600518|pid:none) Rattus norvegicus itch E3 ubiquiti... 92 3e-17
BT059089_1(BT059089|pid:none) Salmo salar clone ssal-rgf-524-195... 92 4e-17
CU638743_682(CU638743|pid:none) Podospora anserina genomic DNA c... 91 6e-17
CR940347_946(CR940347|pid:none) Theileria annulata strain Ankara... 91 6e-17
BC129043_1(BC129043|pid:none) Danio rerio zgc:154036, mRNA (cDNA... 91 6e-17
CU638743_614(CU638743|pid:none) Podospora anserina genomic DNA c... 91 6e-17
AM452363_7(AM452363|pid:none) Vitis vinifera contig VV78X124349.... 91 6e-17
AK304090_1(AK304090|pid:none) Homo sapiens cDNA FLJ50951 complet... 91 1e-16
(Q96J02) RecName: Full=E3 ubiquitin-protein ligase Itchy homolog... 91 1e-16
AP005590_16(AP005590|pid:none) Oryza sativa Japonica Group genom... 91 1e-16
AB209747_1(AB209747|pid:none) Homo sapiens mRNA for itchy homolo... 91 1e-16
CR382122_71(CR382122|pid:none) Kluyveromyces lactis strain NRRL ... 90 1e-16
(Q28BK1) RecName: Full=E3 ubiquitin-protein ligase HACE1; ... 90 2e-16
(Q9DBH0) RecName: Full=NEDD4-like E3 ubiquitin-protein ligase WW... 90 2e-16
BC004712_1(BC004712|pid:none) Mus musculus WW domain containing ... 90 2e-16
AK146306_1(AK146306|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 90 2e-16
AM270079_31(AM270079|pid:none) Aspergillus niger contig An04c018... 90 2e-16
(Q8GY23) RecName: Full=E3 ubiquitin-protein ligase UPL1; ... 89 2e-16
AF161390_1(AF161390|pid:none) Homo sapiens HSPC272 mRNA, partial... 89 2e-16
(Q03280) RecName: Full=E3 ubiquitin-protein ligase TOM1; ... 89 2e-16
D63905_1(D63905|pid:none) Saccharomyces cerevisiae TOM1 gene for... 89 2e-16
AM910987_48(AM910987|pid:none) Plasmodium knowlesi strain H chro... 89 3e-16
AL390186_1(AL390186|pid:none) Homo sapiens mRNA; cDNA DKFZp434N1... 89 3e-16
AB037722_1(AB037722|pid:none) Homo sapiens mRNA for KIAA1301 pro... 89 3e-16
AC024847_5(AC024847|pid:none) Caenorhabditis elegans cosmid Y65B... 89 3e-16
AX405971_1(AX405971|pid:none) Sequence 386 from Patent WO0222660. 89 3e-16
CR749424_1(CR749424|pid:none) Homo sapiens mRNA; cDNA DKFZp686M1... 89 3e-16
(O13834) RecName: Full=E3 ubiquitin-protein ligase ptr1; ... 89 3e-16
(Q9P2P5) RecName: Full=E3 ubiquitin-protein ligase HECW2; ... 89 3e-16
AC024847_4(AC024847|pid:none) Caenorhabditis elegans cosmid Y65B... 89 3e-16
BC055937_1(BC055937|pid:none) Mus musculus WW domain containing ... 89 4e-16
AK292800_1(AK292800|pid:none) Homo sapiens cDNA FLJ75827 complet... 89 4e-16
BC097386_1(BC097386|pid:none) Rattus norvegicus WW domain contai... 89 4e-16
AY892985_1(AY892985|pid:none) Synthetic construct Homo sapiens c... 89 4e-16
BC150812_1(BC150812|pid:none) Mus musculus WW domain containing ... 89 4e-16
AB179191_1(AB179191|pid:none) Macaca fascicularis testis cDNA cl... 89 4e-16
AK033138_1(AK033138|pid:none) Mus musculus 15 days embryo male t... 89 4e-16
(Q9H0M0) RecName: Full=NEDD4-like E3 ubiquitin-protein ligase WW... 89 4e-16
FN392321_39(FN392321|pid:none) Pichia pastoris GS115 chromosome ... 89 4e-16
BC026829_1(BC026829|pid:none) Mus musculus WW domain containing ... 89 4e-16
BC015380_1(BC015380|pid:none) Homo sapiens WW domain containing ... 89 4e-16
AK033922_1(AK033922|pid:none) Mus musculus adult male diencephal... 89 4e-16
(Q9P4Z1) RecName: Full=E3 ubiquitin-protein ligase TOM1-like; ... 88 5e-16
AY069406_1(AY069406|pid:none) Drosophila melanogaster LD10565 fu... 88 5e-16
(Q76N89) RecName: Full=E3 ubiquitin-protein ligase HECW1; ... 88 5e-16
T49799(T49799)related to TOM1 protein [imported] - Neurospora cr... 88 5e-16
AB048365_1(AB048365|pid:none) Homo sapiens NEDL1 mRNA for NEDD4-... 88 5e-16
AK294918_1(AK294918|pid:none) Homo sapiens cDNA FLJ58788 complet... 88 5e-16
AB002320_1(AB002320|pid:none) Homo sapiens KIAA0322 mRNA, partia... 88 5e-16
BC167464_1(BC167464|pid:none) Xenopus tropicalis hypothetical pr... 88 5e-16
(Q8H0T4) RecName: Full=E3 ubiquitin-protein ligase UPL2; ... 88 6e-16
AK230373_1(AK230373|pid:none) Arabidopsis thaliana mRNA for hypo... 88 6e-16
AE014298_1404(AE014298|pid:none) Drosophila melanogaster chromos... 87 8e-16
AB168269_1(AB168269|pid:none) Macaca fascicularis testis cDNA cl... 87 8e-16
AB083710_1(AB083710|pid:none) Mus musculus NEDL1 mRNA for HECT t... 87 8e-16
AJ851778_1(AJ851778|pid:none) Gallus gallus mRNA for hypothetica... 87 8e-16
AL357315_1(AL357315|pid:none) Human DNA sequence from clone RP11... 87 1e-15
AB037741_1(AB037741|pid:none) Homo sapiens mRNA for KIAA1320 pro... 87 1e-15
AK294164_1(AK294164|pid:none) Homo sapiens cDNA FLJ50472 complet... 87 1e-15
AK131207_1(AK131207|pid:none) Homo sapiens cDNA FLJ16076 fis, cl... 87 1e-15
CS300689_1(CS300689|pid:none) Sequence 197 from Patent EP1661986. 87 1e-15
AK292683_1(AK292683|pid:none) Homo sapiens cDNA FLJ75019 complet... 87 1e-15
AM269958_1(AM269958|pid:none) Aspergillus niger contig An01c0110... 87 1e-15
AL834202_1(AL834202|pid:none) Homo sapiens mRNA; cDNA DKFZp434M0... 87 1e-15
(Q3U0D9) RecName: Full=E3 ubiquitin-protein ligase HACE1; ... 87 1e-15
AK042879_1(AK042879|pid:none) Mus musculus 7 days neonate cerebe... 87 1e-15
BX005176_4(BX005176|pid:none) Zebrafish DNA sequence from clone ... 87 1e-15
(A9JRZ0) RecName: Full=E3 ubiquitin-protein ligase SMURF2; ... 86 2e-15
BT060910_1(BT060910|pid:none) Zea mays full-length cDNA clone ZM... 86 2e-15
FN357588_12(FN357588|pid:none) Schistosoma mansoni genome sequen... 86 2e-15
EF173367_6(EF173367|pid:none) Aedes aegypti clone BAC 124C17, co... 86 3e-15
AC087851_14(AC087851|pid:none) Oryza sativa chromosome 3 BAC OSJ... 86 3e-15
AC087412_19(AC087412|pid:none) Oryza sativa chromosome 3 BAC OSJ... 86 3e-15
AL035248_1(AL035248|pid:none) S.pombe chromosome I cosmid c167. 86 3e-15
AK291760_1(AK291760|pid:none) Homo sapiens cDNA FLJ76316 complet... 85 4e-15
AY685230_1(AY685230|pid:none) Mus musculus E3 ubiquitin ligase S... 84 7e-15
CR382127_641(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 84 7e-15
BC065796_1(BC065796|pid:none) Mus musculus SMAD specific E3 ubiq... 84 7e-15
AK049125_1(AK049125|pid:none) Mus musculus ES cells cDNA, RIKEN ... 84 9e-15
BC021525_1(BC021525|pid:none) Mus musculus ubiquitin protein lig... 84 9e-15
(Q80U95) RecName: Full=Ubiquitin-protein ligase E3C; EC... 84 9e-15
AK029973_1(AK029973|pid:none) Mus musculus adult male testis cDN... 84 9e-15
BT050531_1(BT050531|pid:none) Drosophila melanogaster IP20732 fu... 84 9e-15
FN392320_498(FN392320|pid:none) Pichia pastoris GS115 chromosome... 84 1e-14
AB093230_1(AB093230|pid:none) Mus musculus mRNA for mKIAA0317 pr... 84 1e-14
AK154529_1(AK154529|pid:none) Mus musculus NOD-derived CD11c +ve... 84 1e-14
(Q8CHG5) RecName: Full=Protein KIAA0317; &AK077015_1(AK077015|p... 84 1e-14
(Q9HAU4) RecName: Full=E3 ubiquitin-protein ligase SMURF2; ... 84 1e-14
DQ026504_1(DQ026504|pid:none) Leishmania major excreted/secreted... 84 1e-14
BC049900_1(BC049900|pid:none) Mus musculus RIKEN cDNA 1110018G07... 84 1e-14
AP008211_1404(AP008211|pid:none) Oryza sativa (japonica cultivar... 84 1e-14
AK147878_1(AK147878|pid:none) Mus musculus melanocyte cDNA, RIKE... 84 1e-14
BT087875_1(BT087875|pid:none) Zea mays full-length cDNA clone ZM... 84 1e-14
BC009527_1(BC009527|pid:none) Homo sapiens SMAD specific E3 ubiq... 84 1e-14
BC060658_1(BC060658|pid:none) Mus musculus RIKEN cDNA 1110018G07... 84 1e-14
AP008215_140(AP008215|pid:none) Oryza sativa (japonica cultivar-... 83 2e-14
AB179104_1(AB179104|pid:none) Macaca fascicularis testis cDNA cl... 83 2e-14
(Q15386) RecName: Full=Ubiquitin-protein ligase E3C; EC... 83 2e-14
AC004975_1(AC004975|pid:none) Homo sapiens PAC clone RP5-1142J19... 83 2e-14
A38919(A38919) hypothetical protein 1 - human &AB385265_1(AB385... 83 2e-14
CR954213_308(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 82 3e-14
AC119288_6(AC119288|pid:none) Oryza sativa (japonica cultivar-gr... 82 3e-14
AB002315_1(AB002315|pid:none) Homo sapiens mRNA for KIAA0317 gen... 82 5e-14
(O15033) RecName: Full=Protein KIAA0317; &AB383847_1(AB383847|p... 82 5e-14
BC118074_1(BC118074|pid:none) Bos taurus hypothetical protein LO... 81 6e-14
AM055942_186(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 81 8e-14
BC041723_1(BC041723|pid:none) Xenopus laevis ubiquitin-protein i... 81 8e-14
AM910991_167(AM910991|pid:none) Plasmodium knowlesi strain H chr... 81 8e-14
BC121962_1(BC121962|pid:none) Xenopus tropicalis ubiquitin prote... 80 1e-13
AM502225_26(AM502225|pid:none) Leishmania infantum chromosome 7. 80 1e-13
(Q9V853) RecName: Full=E3 ubiquitin-protein ligase Smurf1; ... 80 1e-13
FN357294_25(FN357294|pid:none) Schistosoma mansoni genome sequen... 80 1e-13
CR940348_922(CR940348|pid:none) Theileria annulata strain Ankara... 80 2e-13
AM494944_30(AM494944|pid:none) Leishmania braziliensis chromosom... 80 2e-13
BX247878_4(BX247878|pid:none) Zebrafish DNA sequence from clone ... 79 2e-13
T20274(T20274;T22257) hypothetical protein F45H7.6 - Caenorhabdi... 79 2e-13
D28476_1(D28476|pid:none) Homo sapiens KIAA0045 mRNA, partial cds. 79 3e-13
BC114556_1(BC114556|pid:none) Homo sapiens thyroid hormone recep... 79 3e-13
BC113891_1(BC113891|pid:none) Homo sapiens thyroid hormone recep... 79 3e-13
BC105889_1(BC105889|pid:none) Rattus norvegicus thyroid hormone ... 79 4e-13
BC100624_1(BC100624|pid:none) Rattus norvegicus thyroid hormone ... 79 4e-13
BC088304_1(BC088304|pid:none) Rattus norvegicus thyroid hormone ... 79 4e-13
AY810453_1(AY810453|pid:none) Schistosoma japonicum SJCHGC03288 ... 78 5e-13
AE013599_4067(AE013599|pid:none) Drosophila melanogaster chromos... 78 7e-13
AE014186_182(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 77 9e-13
AE017350_151(AE017350|pid:none) Cryptococcus neoformans var. neo... 77 9e-13
AK015264_1(AK015264|pid:none) Mus musculus adult male testis cDN... 77 1e-12
BC029097_1(BC029097|pid:none) Mus musculus SMAD specific E3 ubiq... 77 1e-12
AC002304_10(AC002304|pid:none) Genomic sequence for Arabidopsis ... 77 1e-12
BC136804_1(BC136804|pid:none) Homo sapiens SMAD specific E3 ubiq... 77 1e-12
BX255887_3(BX255887|pid:none) Zebrafish DNA sequence from clone ... 77 1e-12
AK034814_1(AK034814|pid:none) Mus musculus 12 days embryo embryo... 77 1e-12
BC034113_1(BC034113|pid:none) Mus musculus thyroid hormone recep... 77 1e-12
AM269955_111(AM269955|pid:none) Aspergillus niger contig An01c00... 77 1e-12
BX295540_22(BX295540|pid:none) Neurospora crassa DNA linkage gro... 76 2e-12
CR954215_180(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 76 2e-12
(O94275) RecName: Full=Probable E3 ubiquitin-protein ligase mug3... 76 2e-12
BC094107_1(BC094107|pid:none) Xenopus laevis hypothetical protei... 76 2e-12
BC088585_1(BC088585|pid:none) Xenopus tropicalis hypothetical LO... 76 2e-12
AF199364_1(AF199364|pid:none) Homo sapiens E3 ubiquitin ligase S... 76 2e-12
AC004893_2(AC004893|pid:none) Homo sapiens PAC clone RP4-808A1 f... 76 2e-12
AK034736_1(AK034736|pid:none) Mus musculus 12 days embryo embryo... 76 2e-12
AB046845_1(AB046845|pid:none) Homo sapiens mRNA for KIAA1625 pro... 76 2e-12
(Q9HCE7) RecName: Full=E3 ubiquitin-protein ligase SMURF1; ... 76 2e-12
AL834242_1(AL834242|pid:none) Homo sapiens mRNA; cDNA DKFZp564H2... 75 3e-12
BC168042_1(BC168042|pid:none) Xenopus tropicalis cDNA clone MGC:... 75 3e-12
CU928173_297(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 75 4e-12
AE014134_334(AE014134|pid:none) Drosophila melanogaster chromoso... 75 4e-12
(P33202) RecName: Full=Ubiquitin fusion degradation protein 4; ... 75 4e-12
CP001330_575(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 75 4e-12
AE014134_335(AE014134|pid:none) Drosophila melanogaster chromoso... 75 4e-12
AE014134_336(AE014134|pid:none) Drosophila melanogaster chromoso... 75 4e-12
AY113280_1(AY113280|pid:none) Drosophila melanogaster AT17882 fu... 75 4e-12
CR382139_933(CR382139|pid:none) Debaryomyces hansenii strain CBS... 75 6e-12
BC068967_1(BC068967|pid:none) Xenopus laevis hypothetical protei... 75 6e-12
L40383_1(L40383|pid:none) Homo sapiens thyroid receptor interact... 74 7e-12
BC025227_1(BC025227|pid:none) Mus musculus HECT domain and ankyr... 74 7e-12
CP001327_278(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 74 9e-12
AP007155_985(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 74 9e-12
AP004187_7(AP004187|pid:none) Oryza sativa Japonica Group genomi... 74 1e-11
AP008208_13(AP008208|pid:none) Oryza sativa (japonica cultivar-g... 74 1e-11
FN392320_170(FN392320|pid:none) Pichia pastoris GS115 chromosome... 74 1e-11
AC124963_4(AC124963|pid:none) Medicago truncatula clone mth2-24f... 73 2e-11
CR380952_321(CR380952|pid:none) Candida glabrata strain CBS138 c... 73 2e-11
CR954204_237(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 73 2e-11
BC051405_1(BC051405|pid:none) Mus musculus WW domain containing ... 72 3e-11
CP000594_252(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 72 3e-11
(Q6WWW4) RecName: Full=E3 ubiquitin-protein ligase UPL3; ... 72 4e-11
AK229635_1(AK229635|pid:none) Arabidopsis thaliana mRNA for hypo... 72 4e-11
AC121235_12(AC121235|pid:none) Medicago truncatula clone mth2-21... 72 5e-11
EU515145_4(EU515145|pid:none) Epichloe festucae strain Fl1 hypot... 71 6e-11
FN357896_7(FN357896|pid:none) Schistosoma mansoni genome sequenc... 71 6e-11
(Q3U487) RecName: Full=Probable E3 ubiquitin-protein ligase HECT... 70 1e-10
AK154378_1(AK154378|pid:none) Mus musculus NOD-derived CD11c +ve... 70 1e-10
CR382122_563(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 70 1e-10
BC082276_1(BC082276|pid:none) Mus musculus HECT domain containin... 70 1e-10
BC024415_1(BC024415|pid:none) Mus musculus HECT domain containin... 70 1e-10
AP008211_131(AP008211|pid:none) Oryza sativa (japonica cultivar-... 70 2e-10
AK165482_1(AK165482|pid:none) Mus musculus adult male kidney cDN... 70 2e-10
BC006848_1(BC006848|pid:none) Homo sapiens itchy E3 ubiquitin pr... 70 2e-10
AC093089_3(AC093089|pid:none) Oryza sativa (japonica cultivar-gr... 70 2e-10
AM502254_15(AM502254|pid:none) Leishmania infantum chromosome 36. 70 2e-10
AM494972_665(AM494972|pid:none) Leishmania braziliensis chromoso... 70 2e-10
CP000584_222(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 70 2e-10
BT011134_1(BT011134|pid:none) Drosophila melanogaster HL01545 fu... 69 2e-10
CU928174_42(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 69 2e-10
BC168474_1(BC168474|pid:none) Xenopus tropicalis cDNA clone MGC:... 69 3e-10
AM270241_49(AM270241|pid:none) Aspergillus niger contig An11c024... 69 3e-10
AE014296_1668(AE014296|pid:none) Drosophila melanogaster chromos... 69 3e-10
AM494967_103(AM494967|pid:none) Leishmania braziliensis chromoso... 69 4e-10
AK056873_1(AK056873|pid:none) Homo sapiens cDNA FLJ32311 fis, cl... 69 4e-10
AK301124_1(AK301124|pid:none) Homo sapiens cDNA FLJ55564 complet... 69 4e-10
AK056545_1(AK056545|pid:none) Homo sapiens cDNA FLJ31983 fis, cl... 69 4e-10
CR382130_677(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 68 5e-10
CP000593_253(CP000593|pid:none) Ostreococcus lucimarinus CCE9901... 68 5e-10
T38617(T38617;T39007) probable ubiquitin fusion degradation prot... 68 5e-10
AL034583_15(AL034583|pid:none) S.pombe chromosome I cosmid c637. 68 5e-10
AJ871338_1(AJ871338|pid:none) Nyctotherus ovalis partial gene fo... 68 5e-10
EF676410_1(EF676410|pid:none) Picea sitchensis clone WS02736_B22... 68 5e-10
AM072969_14(AM072969|pid:none) Brachypodium sylvaticum clone 28C... 68 7e-10
(P53119) RecName: Full=Probable E3 ubiquitin-protein ligase HUL5... 68 7e-10
FN317349_1(FN317349|pid:none) Schistosoma japonicum isolate Anhu... 68 7e-10
AE016817_121(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 67 9e-10
AC114261_1(AC114261|pid:none) Dictyostelium discoideum chromosom... 67 1e-09
AY254380_1(AY254380|pid:none) Homo sapiens E3 ligase for inhibin... 67 2e-09
AY739714_1(AY739714|pid:none) Homo sapiens HECTD1 mRNA, partial ... 67 2e-09
(Q9ULT8) RecName: Full=E3 ubiquitin-protein ligase HECTD1; ... 67 2e-09
CP000500_390(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 67 2e-09
AY810307_1(AY810307|pid:none) Schistosoma japonicum SJCHGC03644 ... 67 2e-09
BC172391_1(BC172391|pid:none) Synthetic construct Homo sapiens c... 67 2e-09
AK125788_1(AK125788|pid:none) Homo sapiens cDNA FLJ43800 fis, cl... 67 2e-09
BC063686_1(BC063686|pid:none) Homo sapiens HECT domain containin... 67 2e-09
BC011658_1(BC011658|pid:none) Homo sapiens HECT domain containin... 67 2e-09
AL110222_1(AL110222|pid:none) Homo sapiens mRNA; cDNA DKFZp434K2... 67 2e-09
AB032957_1(AB032957|pid:none) Homo sapiens mRNA for KIAA1131 pro... 67 2e-09
AK077185_1(AK077185|pid:none) Mus musculus adult male testis cDN... 67 2e-09
I83196(I83196)NEDD-4 ORF - mouse (fragment) 66 2e-09
BC124337_1(BC124337|pid:none) Danio rerio HECT domain containing... 66 3e-09
BT054852_1(BT054852|pid:none) Zea mays full-length cDNA clone ZM... 66 3e-09
CP001328_402(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 65 3e-09
CR380959_444(CR380959|pid:none) Candida glabrata strain CBS138 c... 65 3e-09
FM992695_107(FM992695|pid:none) Candida dubliniensis CD36 chromo... 65 3e-09
T20373(T20373) hypothetical protein D2085.4 - Caenorhabditis ele... 65 3e-09
BC083494_1(BC083494|pid:none) Homo sapiens HECT domain containin... 65 3e-09
CR940347_1078(CR940347|pid:none) Theileria annulata strain Ankar... 65 4e-09
AE016815_224(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 65 6e-09
BC121928_1(BC121928|pid:none) Xenopus tropicalis HECT domain con... 64 8e-09
AY578810_1(AY578810|pid:none) Anopheles gambiae smurf gene, comp... 64 8e-09
AM920427_865(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 64 1e-08
CT005267_97(CT005267|pid:none) Leishmania major strain Friedlin,... 63 2e-08
AC150798_2(AC150798|pid:none) Medicago truncatula chromosome 2 c... 63 2e-08
CT005269_114(CT005269|pid:none) Leishmania major strain Friedlin... 62 3e-08
AM502250_151(AM502250|pid:none) Leishmania infantum chromosome 32. 62 4e-08
BC010205_1(BC010205|pid:none) Mus musculus HECT domain containin... 62 4e-08
CU928168_251(CU928168|pid:none) Kluyveromyces thermotolerans str... 62 4e-08
AE014134_1894(AE014134|pid:none) Drosophila melanogaster chromos... 62 4e-08
EZ000441_1(EZ000441|pid:none) TSA: Culex tarsalis Ctar-288 E3 ub... 61 6e-08
BC026415_1(BC026415|pid:none) Mus musculus ubiquitin protein lig... 61 6e-08
FN392319_678(FN392319|pid:none) Pichia pastoris GS115 chromosome... 61 8e-08
BX537403_1(BX537403|pid:none) Homo sapiens mRNA; cDNA DKFZp686A1... 60 1e-07
AK029133_1(AK029133|pid:none) Mus musculus 10 days neonate skin ... 60 1e-07
AM502253_540(AM502253|pid:none) Leishmania infantum chromosome 35. 60 1e-07
BC150637_1(BC150637|pid:none) Homo sapiens ubiquitin protein lig... 60 1e-07
AF251046_1(AF251046|pid:none) Homo sapiens UBE3B variant 1 (UBE3... 60 1e-07
(Q7Z3V4) RecName: Full=Ubiquitin-protein ligase E3B; EC... 60 1e-07
CP000081_534(CP000081|pid:none) Leishmania major chromosome 35, ... 60 1e-07
(Q15751) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 59 3e-07
CP000081_397(CP000081|pid:none) Leishmania major chromosome 35, ... 59 3e-07
AM494969_119(AM494969|pid:none) Leishmania braziliensis chromoso... 59 3e-07
AM494971_398(AM494971|pid:none) Leishmania braziliensis chromoso... 58 5e-07
AM448227_3(AM448227|pid:none) Vitis vinifera contig VV78X101543.... 58 5e-07
T21546(T21546;T21837)hypothetical protein F36A2.13 - Caenorhabdi... 58 7e-07
Z75952_1(Z75952|pid:none) Caenorhabditis elegans Cosmid F29D10, ... 58 7e-07
FN357682_3(FN357682|pid:none) Schistosoma mansoni genome sequenc... 57 2e-06
EU415431_1(EU415431|pid:none) Drosophila melanogaster clone HERC... 56 2e-06
(Q86YY7) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 56 2e-06
CP001325_279(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 56 2e-06
BC089310_1(BC089310|pid:none) Mus musculus HECT domain containin... 56 2e-06
AM910983_29(AM910983|pid:none) Plasmodium knowlesi strain H chro... 56 2e-06
AK220338_1(AK220338|pid:none) Mus musculus mRNA for mKIAA0393 pr... 56 3e-06
BC054829_1(BC054829|pid:none) Mus musculus hect (homologous to t... 56 3e-06
BC032944_1(BC032944|pid:none) Homo sapiens KIAA0317, mRNA (cDNA ... 56 3e-06
AL844506_53(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 56 3e-06
AK148361_1(AK148361|pid:none) Mus musculus B16 F10Y cells cDNA, ... 56 3e-06
(Q7TPR5) RecName: Full=Probable E3 ubiquitin-protein ligase HERC... 56 3e-06
AE014298_3135(AE014298|pid:none) Drosophila melanogaster chromos... 55 6e-06
EU415427_1(EU415427|pid:none) Drosophila melanogaster clone HERC... 55 6e-06
EU415435_1(EU415435|pid:none) Drosophila melanogaster clone HERC... 55 6e-06
EU415436_1(EU415436|pid:none) Drosophila melanogaster clone HERC... 55 6e-06
AC159449_13(AC159449|pid:none) Trypanosoma brucei chromosome 4 c... 54 1e-05
AF061529_1(AF061529|pid:none) Mus musculus rjs (rjs) mRNA, compl... 54 1e-05
AK220383_1(AK220383|pid:none) Mus musculus mRNA for mKIAA1320 pr... 54 1e-05
U96113_1(U96113|pid:none) Homo sapiens Nedd-4-like ubiquitin-pro... 53 2e-05
EU415447_1(EU415447|pid:none) Drosophila melanogaster clone HERC... 53 2e-05
EU415439_1(EU415439|pid:none) Drosophila melanogaster clone HERC... 52 3e-05
BC006237_1(BC006237|pid:none) Homo sapiens HECT domain containin... 52 3e-05
AM502250_445(AM502250|pid:none) Leishmania infantum chromosome 32. 52 3e-05
AK117912_1(AK117912|pid:none) Arabidopsis thaliana At1g55860 mRN... 52 4e-05
BC064678_1(BC064678|pid:none) Mus musculus itchy, mRNA (cDNA clo... 52 4e-05
BC025474_1(BC025474|pid:none) Mus musculus HECT domain and ankyr... 52 4e-05
EU415429_1(EU415429|pid:none) Drosophila melanogaster clone HERC... 52 5e-05
AF009341_1(AF009341|pid:none) Homo sapiens E6-AP ubiquitin-prote... 51 9e-05
AK149648_1(AK149648|pid:none) Mus musculus bone marrow macrophag... 50 1e-04
CT005271_414(CT005271|pid:none) Leishmania major strain Friedlin... 50 2e-04
AK302142_1(AK302142|pid:none) Homo sapiens cDNA FLJ61690 complet... 48 6e-04
BC127372_1(BC127372|pid:none) Xenopus tropicalis hypothetical pr... 48 7e-04
AM910993_212(AM910993|pid:none) Plasmodium knowlesi strain H chr... 47 0.002
FN357426_2(FN357426|pid:none) Schistosoma mansoni genome sequenc... 47 0.002
(P51592) RecName: Full=E3 ubiquitin-protein ligase hyd; ... 47 0.002
FN370394_1(FN370394|pid:none) Schistosoma mansoni genome sequenc... 46 0.002
CR954213_273(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 45 0.004
AY813829_1(AY813829|pid:none) Schistosoma japonicum SJCHGC09553 ... 45 0.004
AB014514_1(AB014514|pid:none) Homo sapiens mRNA for KIAA0614 pro... 45 0.006
(Q9Y4D8) RecName: Full=Probable E3 ubiquitin-protein ligase KIAA... 45 0.006
EZ000233_1(EZ000233|pid:none) TSA: Amblyomma americanum Contig19... 45 0.006
BC006270_1(BC006270|pid:none) Homo sapiens chromosome 12 open re... 45 0.006
BC098193_1(BC098193|pid:none) Mus musculus expressed sequence AU... 44 0.011
AK129172_1(AK129172|pid:none) Mus musculus mRNA for mKIAA0614 pr... 44 0.011
AK037367_1(AK037367|pid:none) Mus musculus 16 days neonate thymu... 44 0.011
BC051044_1(BC051044|pid:none) Mus musculus expressed sequence AU... 44 0.011
BC052057_1(BC052057|pid:none) Mus musculus expressed sequence AU... 44 0.011
AY914888_1(AY914888|pid:none) Schistosoma japonicum ITCH protein... 44 0.011
AB098939_1(AB098939|pid:none) Bos taurus mRNA for similar to gua... 44 0.014
CP001575_521(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 44 0.014
AM494971_240(AM494971|pid:none) Leishmania braziliensis chromoso... 42 0.031
BX890571_1(BX890571|pid:none) Zebrafish DNA sequence from clone ... 42 0.040
AM494972_461(AM494972|pid:none) Leishmania braziliensis chromoso... 42 0.052
BC096045_1(BC096045|pid:none) Mus musculus hect (homologous to t... 40 0.12
AK050978_1(AK050978|pid:none) Mus musculus 9 days embryo whole b... 40 0.12
BC081553_1(BC081553|pid:none) Danio rerio ubiquitin protein liga... 40 0.12
(Q80TP3) RecName: Full=E3 ubiquitin-protein ligase UBR5; ... 40 0.15
BC049162_1(BC049162|pid:none) Mus musculus ubiquitin protein lig... 40 0.15
U95000_1(U95000|pid:none) Homo sapiens hyd protein (HYD) mRNA, c... 40 0.15
AB384540_1(AB384540|pid:none) Synthetic construct DNA, clone: pF... 40 0.15
AB020703_1(AB020703|pid:none) Homo sapiens mRNA for KIAA0896 pro... 40 0.15
AY550908_1(AY550908|pid:none) Mus musculus hyperplastic discs pr... 40 0.15
AK002172_1(AK002172|pid:none) Homo sapiens cDNA FLJ11310 fis, cl... 40 0.15
BC049224_1(BC049224|pid:none) Mus musculus ubiquitin protein lig... 40 0.15
BC103025_1(BC103025|pid:none) Bos taurus ubiquitin protein ligas... 40 0.15
S22659(S22659) hypothetical protein, 100K - rat &X64411_1(X6441... 40 0.15
BC032301_1(BC032301|pid:none) Homo sapiens ubiquitin protein lig... 40 0.15
(O95071) RecName: Full=E3 ubiquitin-protein ligase UBR5; ... 40 0.15
(Q62671) RecName: Full=E3 ubiquitin-protein ligase UBR5; ... 40 0.15
AB173139_1(AB173139|pid:none) Macaca fascicularis brain cDNA clo... 40 0.20
AM055943_128(AM055943|pid:none) Toxoplasma gondii RH, genomic DN... 40 0.20
AX876610_1(AX876610|pid:none) Sequence 11515 from Patent EP10746... 39 0.34
AY948554_1(AY948554|pid:none) Bos taurus ubiquitin protein ligas... 39 0.34
CT005252_147(CT005252|pid:none) Leishmania major strain Friedlin... 38 0.58
CR940347_45(CR940347|pid:none) Theileria annulata strain Ankara ... 38 0.75
AM502253_273(AM502253|pid:none) Leishmania infantum chromosome 35. 38 0.75
DQ272526_1(DQ272526|pid:none) Bubalus bubalis HECT domain and RC... 36 2.9
DQ985735_1(DQ985735|pid:none) Macropus eugenii ubiquitin protein... 34 8.3

>AB194232_2(AB194232|pid:none) Homo sapiens mRNA for hypotherical
protein, ubiquitin ligase E3A isoform 1, complete cds.
Length = 852

Score = 156 bits (394), Expect = 1e-36
Identities = 75/149 (50%), Positives = 101/149 (67%), Gaps = 2/149 (1%)
Frame = +1

Query: 535 SISKQFAPFFKGFRMVCDSPILKIL-KPEELGNLVCGVEDLNFIELERGTNYEGGYTQDD 711
S+ KQF F +GF MV + P LK L +PEE+ L+CG +L+F LE T Y+GGYT+D
Sbjct: 702 SVEKQFKAFRRGFHMVTNEPPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRDS 761

Query: 712 TTIKNFWKVLHGLSDEDKRRFLTFVTGGDRVPYGGLEKMSFTITKTA-DSDRLPSAHTCF 888
I+ FW+++H +DE KR FL F TG DR P GGL K+ I K D++RLP++HTCF
Sbjct: 762 VLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTERLPTSHTCF 821

Query: 889 NTLILPAYPEFEKLRDLLTKALTHYEGFG 975
N L+LP Y EKL++ L KA+T+ +GFG
Sbjct: 822 NVLLLPEYSSKEKLKERLLKAITYAKGFG 850

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,254,453,961
Number of extensions: 21174338
Number of successful extensions: 48136
Number of sequences better than 10.0: 489
Number of HSP's gapped: 47503
Number of HSP's successfully gapped: 496
Length of query: 376
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 246
Effective length of database: 630,428,194
Effective search space: 155085335724
Effective search space used: 155085335724
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.91 gvh: 0.50 alm: 0.18 top: 0.00 tms: 0.20 mit: 0.41 mip: 0.00
nuc: 0.20 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

28.0 %: mitochondrial
28.0 %: endoplasmic reticulum
12.0 %: plasma membrane
12.0 %: nuclear
8.0 %: extracellular, including cell wall
4.0 %: Golgi
4.0 %: cytoplasmic
4.0 %: vesicles of secretory system

>> prediction for Contig-U15975-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0