| Contig-U15937-1 |
| Contig ID |
Contig-U15937-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1836 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
569991 |
| End point |
571087 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
5 |
| Number of EST |
8 |
| Link to clone list |
U15937 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 3. 3 |
| Homology vs DNA |
Query= Contig-U15937-1 (Contig-U15937-1Q) /CSM_Contig/Contig-U15937-1Q.Seq.d
(1846 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ385750) Dictyostelium discoideum cDNA clone:ddc56d01, 3' ... 1443 0.0 2
(BJ424975) Dictyostelium discoideum cDNA clone:ddv54p02, 5' ... 1076 0.0 1
(BJ370937) Dictyostelium discoideum cDNA clone:ddc56d01, 5' ... 666 0.0 2
(C24382) Dictyostelium discoideum gamete cDNA, clone FC-AS18. 841 0.0 2
(BJ443814) Dictyostelium discoideum cDNA clone:ddv54p02, 3' ... 848 0.0 2
(AU284546) Dictyostelium discoideum gamete cDNA clone:FC-BC0... 440 0.0 2
(C24383) Dictyostelium discoideum gamete cDNA, clone FC-AS18. 410 0.0 2
(BJ436668) Dictyostelium discoideum cDNA clone:ddv31k21, 3' ... 291 e-121 2
(C90102) Dictyostelium discoideum slug cDNA, clone SSG542. 90 5e-14 2
(C90097) Dictyostelium discoideum slug cDNA, clone SSG534. 90 6e-14 2
(CP000107) Ehrlichia canis str. Jake, complete genome. 36 0.012 2
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 40 0.020 12
(DX388569) Diversa 1104 Library 5 >3877_1112083_F Library5 A... 52 0.076 1
(AC162880) Mus musculus chromosome 1, clone RP24-275N11, com... 50 0.30 1
(AC134426) Mus musculus chromosome 1, clone RP24-342A12, com... 50 0.30 1
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 50 0.30 1
(EE324203) AGENCOURT_87456757 NICHD_XGC_panc Xenopus laevis ... 50 0.30 1
(C92575) Dictyostelium discoideum slug cDNA, clone SSE785. 36 0.85 2
(AU037792) Dictyostelium discoideum slug cDNA, clone SSE302. 36 0.85 2
(AU073474) Dictyostelium discoideum slug cDNA, clone SSH314. 36 0.89 2
(AU073309) Dictyostelium discoideum slug cDNA, clone SSG640. 36 0.89 2
(EJ027652) 1095454031086 Global-Ocean-Sampling_GS-26-01-01-1... 48 1.2 1
(GD213327) G1045P382FC12.T1 Aplysia californica Pooled Norma... 48 1.2 1
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 48 1.2 1
(AC220074) Heliconius erato clone BBAM-12K4, WORKING DRAFT S... 40 1.2 5
(AC007991) Homo sapiens, clone RP11-44K6, complete sequence. 40 1.8 4
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 36 2.1 11
(CU074398) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.1 6
(AE017308) Mycoplasma mobile 163K complete genome. 34 2.1 2
(AP006851) Oryza sativa Japonica Group genomic DNA, chromoso... 42 2.6 3
(AC193804) Heliconius erato clone BBAM-38A20, WORKING DRAFT ... 40 4.2 5
(BX324171) Zebrafish DNA sequence from clone DKEYP-57C9 in l... 46 4.7 1
(AL357519) Human DNA sequence from clone RP11-367G18 on chro... 46 4.7 1
(AC143751) Macaca mulatta clone CH250-268F4, WORKING DRAFT S... 46 4.7 1
(AC128352) Rattus norvegicus clone CH230-147O15, WORKING DRA... 46 4.7 1
(AC117093) Rattus norvegicus clone CH230-387I8, *** SEQUENCI... 46 4.7 1
(AC105780) Rattus norvegicus clone CH230-215H5, *** SEQUENCI... 46 4.7 1
(AC073853) Homo sapiens chromosome 6 clone RP11-763L6, WORKI... 46 4.7 1
(AL592432) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 4.7 1
(AC220727) Bos taurus clone CH240-348D8, WORKING DRAFT SEQUE... 46 4.7 1
(AC218816) Bos taurus clone CH240-293G1, WORKING DRAFT SEQUE... 46 4.7 1
(AC182095) Bos taurus clone CH240-397A24, WORKING DRAFT SEQU... 46 4.7 1
(AC022812) Homo sapiens chromosome 6 clone RP11-745F13 map 6... 46 4.7 1
(AC016102) Homo sapiens clone RP11-26H14, WORKING DRAFT SEQU... 46 4.7 1
(ER414040) 1095390068475 Global-Ocean-Sampling_GS-34-01-01-1... 46 4.7 1
(EJ146136) 1092343717593 Global-Ocean-Sampling_GS-27-01-01-1... 46 4.7 1
(DH186112) Oryzias latipes Fosmid clone:GOLWFno464_b09, reve... 46 4.7 1
(BZ408600) OGACY18TC ZM_0.7_1.5_KB Zea mays genomic clone ZM... 46 4.7 1
(DR981901) EST0965 Miamiensis avidus YS1 cDNA Miamiensis avi... 46 4.7 1
(BJ490821) Oryzias latipes cDNA clone:MF01FSA021P01, 5' end ... 46 4.7 1
(GE407885) 293799045 Nasonia vitripennis Female Pupae Nasoni... 46 4.7 1
(GE375536) 292315310 Nasonia vitripennis Male Pupae Nasonia ... 46 4.7 1
(FK046431) XABT115303.g2 Gateway compatible cien cDNA librar... 40 5.1 2
(EJ835095) 1093017621318 Global-Ocean-Sampling_GS-30-02-01-1... 42 6.7 2
(EJ060110) 1095456058921 Global-Ocean-Sampling_GS-26-01-01-1... 42 7.3 2
(CZ942461) 314649 Tomato EcoRI BAC Library Solanum lycopersi... 40 7.6 2
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 34 7.9 13
(EJ653533) 1092954009366 Global-Ocean-Sampling_GS-30-02-01-1... 38 7.9 2
(AM452705) Vitis vinifera, whole genome shotgun sequence, co... 40 8.0 4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 32 8.0 2
(CR759865) Zebrafish DNA sequence from clone CH211-118E11 in... 32 8.9 2
(AC181666) Strongylocentrotus purpuratus clone R3-3041J21, W... 36 9.0 6
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 36 9.5 9
(AC193731) Callicebus moloch clone LB5-206H12, WORKING DRAFT... 38 9.6 4
(AM435044) Vitis vinifera contig VV78X128027.2, whole genome... 36 9.9 3
>(BJ385750) Dictyostelium discoideum cDNA clone:ddc56d01, 3' end,
single read.
Length = 777
Score = 1443 bits (728), Expect(2) = 0.0
Identities = 728/728 (100%)
Strand = Plus / Plus
Query: 1119 tcattcctccaagctcaagttaggaatttagtaaacaatggacaattatattttgttggt 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 tcattcctccaagctcaagttaggaatttagtaaacaatggacaattatattttgttggt 109
Query: 1179 ggtggttgggcacaaaatgatgagggtgcaactcactatcaagcagttatcaatcaaatg 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggtggttgggcacaaaatgatgagggtgcaactcactatcaagcagttatcaatcaaatg 169
Query: 1239 acattaggccaccaatttttgttatcagaatttggcgtggttccagagattggctggcag 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acattaggccaccaatttttgttatcagaatttggcgtggttccagagattggctggcag 229
Query: 1299 attgacccctttggaccatcaactttaacagccacactcttctcattgatggggttcaaa 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 attgacccctttggaccatcaactttaacagccacactcttctcattgatggggttcaaa 289
Query: 1359 taccatgttatcaatagaatagatgaacgtattaaatatatatacaatgatacacccgac 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 taccatgttatcaatagaatagatgaacgtattaaatatatatacaatgatacacccgac 349
Query: 1419 attgtgggatcgggttggatgacgactgacaggtccttcgagttccagtggtatccatcg 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 attgtgggatcgggttggatgacgactgacaggtccttcgagttccagtggtatccatcg 409
Query: 1479 cataatgaccaagagctgtccattttcacacatgtgttagaccaccattataactcgccc 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cataatgaccaagagctgtccattttcacacatgtgttagaccaccattataactcgccc 469
Query: 1539 tatttgatatacccaaatgcaagcaacccaaatcagtcgttaactaccgggttcgatttc 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tatttgatatacccaaatgcaagcaacccaaatcagtcgttaactaccgggttcgatttc 529
Query: 1599 gagtctgatcccacacaaaatccgcccatcaatcaatccaatatctacgagagggcagct 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gagtctgatcccacacaaaatccgcccatcaatcaatccaatatctacgagagggcagct 589
Query: 1659 gtatttgtggagatcatgcagcaacggtctcaattgtacagacataacaatttactcata 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gtatttgtggagatcatgcagcaacggtctcaattgtacagacataacaatttactcata 649
Query: 1719 ccatttggcaatgattttagattccaaaatgcgtcgttggaattcgacaatatggataaa 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ccatttggcaatgattttagattccaaaatgcgtcgttggaattcgacaatatggataaa 709
Query: 1779 ctgatcacctacatcaattccaactcgtcgtggggtgtcactattcaatacgcaacgttg 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ctgatcacctacatcaattccaactcgtcgtggggtgtcactattcaatacgcaacgttg 769
Query: 1839 aatgagta 1846
||||||||
Sbjct: 770 aatgagta 777
Score = 89.7 bits (45), Expect(2) = 0.0
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 1069 ttaattgggcagagatttattattttgaaacatggtggaatgaacaat 1116
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaattgggcngagatttattattttgaaacatggtggaatgaacaat 48
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,940,006,059
Number of extensions: 115497840
Number of successful extensions: 9490848
Number of sequences better than 10.0: 66
Length of query: 1846
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1822
Effective length of database: 96,409,374,237
Effective search space: 175657879859814
Effective search space used: 175657879859814
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.19 |
| Homology vs Protein |
Query= Contig-U15937-1 (Contig-U15937-1Q) /CSM_Contig/Contig-U15937-1Q.Seq.d
(1846 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54YF7) RecName: Full=Alpha-mannosidase B; EC=3.2.1.24... 668 0.0
(P34098) RecName: Full=Lysosomal alpha-mannosidase; Sho... 219 3e-55
M82822_1(M82822|pid:none) Dictyostelium discoideum alpha-mannosi... 213 2e-53
BT024287_1(BT024287|pid:none) Drosophila melanogaster IP13633 fu... 204 7e-51
AY119107_1(AY119107|pid:none) Drosophila melanogaster RE08556 fu... 202 3e-50
AE014134_1633(AE014134|pid:none) Drosophila melanogaster chromos... 202 3e-50
AE014134_1971(AE014134|pid:none) Drosophila melanogaster chromos... 202 3e-50
(Q54YC4) RecName: Full=Alpha-mannosidase D; EC=3.2.1.24... 201 1e-49
AL391146_7(AL391146|pid:none) Arabidopsis thaliana DNA chromosom... 196 2e-48
AK161799_1(AK161799|pid:none) Mus musculus 13 days embryo male t... 192 3e-47
AK165376_1(AK165376|pid:none) Mus musculus 6 days neonate spleen... 192 3e-47
AF107018_1(AF107018|pid:none) Mus musculus alpha-mannosidase IIx... 192 3e-47
AK004900_1(AK004900|pid:none) Mus musculus adult male liver cDNA... 192 3e-47
BC168692_1(BC168692|pid:none) Rattus norvegicus mannosidase 2, a... 191 6e-47
BC072937_1(BC072937|pid:none) Xenopus laevis MGC80473 protein, m... 191 8e-47
L28821_1(L28821|pid:none) Homo sapiens alpha mannosidase II isoz... 191 8e-47
(P49641) RecName: Full=Alpha-mannosidase 2x; EC=3.2.1.1... 191 8e-47
BC061819_1(BC061819|pid:none) Rattus norvegicus mannosidase, alp... 190 1e-46
CR391969_1(CR391969|pid:none) Zebrafish DNA sequence from clone ... 190 1e-46
BT059264_1(BT059264|pid:none) Salmo salar clone ssal-rgf-537-217... 189 2e-46
U87240_1(U87240|pid:none) Mus musculus lysosomal alpha-mannosida... 188 7e-46
U29947_1(U29947|pid:none) Mus musculus alpha-D-mannosidase (Man2... 188 7e-46
AF044192_1(AF044192|pid:none) Mus musculus lysosomal alpha-manno... 188 7e-46
BC075578_1(BC075578|pid:none) Xenopus tropicalis mannosidase, al... 187 9e-46
AK004817_1(AK004817|pid:none) Mus musculus adult male lung cDNA,... 187 1e-45
AB209921_1(AB209921|pid:none) Homo sapiens mRNA for mannosidase,... 186 2e-45
(P28494) RecName: Full=Alpha-mannosidase 2; EC=3.2.1.11... 186 2e-45
M24353_1(M24353|pid:none) Rattus norvegicus alpha-mannosidase II... 186 2e-45
AK291572_1(AK291572|pid:none) Homo sapiens cDNA FLJ76867 complet... 185 4e-45
U05572_1(U05572|pid:none) Human lysosomal alpha-mannosidase (MAN... 184 1e-44
AB026648_12(AB026648|pid:none) Arabidopsis thaliana genomic DNA,... 183 2e-44
BC142656_1(BC142656|pid:none) Homo sapiens mannosidase, alpha, c... 182 3e-44
AC148217_12(AC148217|pid:none) Medicago truncatula clone mth2-20... 182 3e-44
(P27046) RecName: Full=Alpha-mannosidase 2; EC=3.2.1.11... 182 3e-44
JC2200(JC2200)alpha-mannosidase (EC 3.2.1.24) precursor - human 182 4e-44
BC157506_1(BC157506|pid:none) Xenopus tropicalis cDNA clone MGC:... 182 5e-44
BC125785_1(BC125785|pid:none) Xenopus tropicalis bagpipe homeobo... 182 5e-44
AE014134_1631(AE014134|pid:none) Drosophila melanogaster chromos... 182 5e-44
AE014134_1973(AE014134|pid:none) Drosophila melanogaster chromos... 181 1e-43
AB011474_23(AB011474|pid:none) Arabidopsis thaliana genomic DNA,... 180 1e-43
JC4037(JC4037;S47019)alpha-mannosidase II, Golgi - fruit fly (Dr... 179 2e-43
(Q24451) RecName: Full=Alpha-mannosidase 2; EC=3.2.1.11... 179 2e-43
BC033307_1(BC033307|pid:none) Homo sapiens mannosidase, alpha, c... 179 3e-43
(Q9Y2E5) RecName: Full=Epididymis-specific alpha-mannosidase; ... 179 3e-43
BC121882_1(BC121882|pid:none) Xenopus tropicalis lysosomal alpha... 179 3e-43
BC154722_1(BC154722|pid:none) Xenopus tropicalis hypothetical pr... 179 4e-43
(Q5RDJ3) RecName: Full=Epididymis-specific alpha-mannosidase; ... 178 5e-43
AJ132715_1(AJ132715|pid:none) Drosophila melanogaster GMII gene,... 177 9e-43
BC091843_1(BC091843|pid:none) Danio rerio zgc:110815, mRNA (cDNA... 177 9e-43
(Q28949) RecName: Full=Epididymis-specific alpha-mannosidase; ... 177 2e-42
AL833071_1(AL833071|pid:none) Homo sapiens mRNA; cDNA DKFZp451A0... 177 2e-42
D28521_1(D28521|pid:none) Boar mRNA for 135kDa protein, complete... 177 2e-42
AY325216_1(AY325216|pid:none) Rattus norvegicus Ab2-450 mRNA, co... 176 3e-42
AY036155_1(AY036155|pid:none) Cavia porcellus lysosomal alpha-ma... 174 7e-42
(Q8VHC8) RecName: Full=Lysosomal alpha-mannosidase; Sho... 174 7e-42
CQ869495_1(CQ869495|pid:none) Sequence 50 from Patent WO20040744... 172 5e-41
Z75954_2(Z75954|pid:none) Caenorhabditis elegans Cosmid F58H1, c... 172 5e-41
(Q29451) RecName: Full=Lysosomal alpha-mannosidase; Sho... 171 6e-41
AY099704_1(AY099704|pid:none) Arabidopsis thaliana alpha-mannosi... 171 8e-41
AB005230_20(AB005230|pid:none) Arabidopsis thaliana genomic DNA,... 171 8e-41
CR762218_1(CR762218|pid:none) Xenopus tropicalis finished cDNA, ... 169 4e-40
FN357386_14(FN357386|pid:none) Schistosoma mansoni genome sequen... 169 4e-40
AK068415_1(AK068415|pid:none) Oryza sativa Japonica Group cDNA c... 168 5e-40
U40948_5(U40948|pid:none) Caenorhabditis elegans cosmid F55D10, ... 168 5e-40
AF005034_1(AF005034|pid:none) Spodoptera frugiperda alpha-mannos... 166 3e-39
AC090873_14(AC090873|pid:none) Oryza sativa chromosome 10 clone ... 163 2e-38
CQ869500_1(CQ869500|pid:none) Sequence 55 from Patent WO20040744... 156 3e-36
AF077741_1(AF077741|pid:none) Trypanosoma cruzi lysosomal acid a... 149 3e-34
AE014297_2161(AE014297|pid:none) Drosophila melanogaster chromos... 147 1e-33
CP001330_334(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 147 1e-33
AB018079_1(AB018079|pid:none) Drosophila melanogaster GTD#24/1 m... 147 2e-33
U97015_6(U97015|pid:none) Caenorhabditis elegans cosmid F48C1, c... 139 3e-31
AB171702_1(AB171702|pid:none) Macaca fascicularis brain cDNA clo... 135 4e-30
AK301473_1(AK301473|pid:none) Homo sapiens cDNA FLJ61716 complet... 134 9e-30
AY810753_1(AY810753|pid:none) Schistosoma japonicum SJCHGC06744 ... 118 6e-25
AM426888_2(AM426888|pid:none) Vitis vinifera contig VV78X263404.... 84 2e-14
BT057588_1(BT057588|pid:none) Salmo salar clone ssal-evf-577-195... 76 5e-12
EU346203_2(EU346203|pid:none) Sus scrofa mannosidase alpha class... 61 1e-07
AY714869_26(AY714869|pid:none) Uncultured archaeon GZfos3D4 clon... 60 3e-07
AE000512_1819(AE000512|pid:none) Thermotoga maritima MSB8, compl... 59 6e-07
CU928173_97(CU928173|pid:none) Zygosaccharomyces rouxii strain C... 59 8e-07
CP000605_189(CP000605|pid:none) Bifidobacterium longum DJO10A, c... 59 8e-07
AE017283_1442(AE017283|pid:none) Propionibacterium acnes KPA1712... 59 8e-07
AK293799_1(AK293799|pid:none) Homo sapiens cDNA FLJ50120 complet... 58 1e-06
AK299213_1(AK299213|pid:none) Homo sapiens cDNA FLJ51745 complet... 58 1e-06
AF152395_4(AF152395|pid:none) Mycobacterium chelonae beta-lactam... 58 1e-06
CU458896_4197(CU458896|pid:none) Mycobacterium abscessus chromos... 57 2e-06
CP001095_833(CP001095|pid:none) Bifidobacterium longum subsp. in... 57 2e-06
CP001618_2978(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 57 2e-06
AL939107_92(AL939107|pid:none) Streptomyces coelicolor A3(2) com... 57 3e-06
(Q9UT61) RecName: Full=Alpha-mannosidase; EC=3.2.1.24; ... 57 3e-06
T29545(T29545)hypothetical protein F48C1.1 - Caenorhabditis eleg... 56 4e-06
CR382139_758(CR382139|pid:none) Debaryomyces hansenii strain CBS... 56 4e-06
CP000716_990(CP000716|pid:none) Thermosipho melanesiensis BI429,... 55 7e-06
CP001098_1428(CP001098|pid:none) Halothermothrix orenii H 168, c... 55 7e-06
BC055006_1(BC055006|pid:none) Mus musculus mannosidase 2, alpha ... 55 7e-06
AP009256_1238(AP009256|pid:none) Bifidobacterium adolescentis AT... 55 9e-06
AE017283_57(AE017283|pid:none) Propionibacterium acnes KPA171202... 55 9e-06
CP000969_953(CP000969|pid:none) Thermotoga sp. RQ2, complete gen... 55 9e-06
CP000667_1176(CP000667|pid:none) Salinispora tropica CNB-440, co... 55 1e-05
BA000030_7284(BA000030|pid:none) Streptomyces avermitilis MA-468... 54 1e-05
EU346203_1(EU346203|pid:none) Sus scrofa mannosidase alpha class... 54 2e-05
CU633901_161(CU633901|pid:none) Podospora anserina genomic DNA c... 54 2e-05
CP000924_603(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 54 2e-05
CP000454_800(CP000454|pid:none) Arthrobacter sp. FB24, complete ... 54 3e-05
CP001098_1487(CP001098|pid:none) Halothermothrix orenii H 168, c... 53 3e-05
AE017261_91(AE017261|pid:none) Picrophilus torridus DSM 9790, co... 52 6e-05
FN392322_827(FN392322|pid:none) Pichia pastoris GS115 chromosome... 52 7e-05
CP001037_3885(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 52 7e-05
AE014295_163(AE014295|pid:none) Bifidobacterium longum NCC2705, ... 52 7e-05
CP000605_188(CP000605|pid:none) Bifidobacterium longum DJO10A, c... 52 7e-05
CP000605_191(CP000605|pid:none) Bifidobacterium longum DJO10A, c... 52 1e-04
BA000030_1759(BA000030|pid:none) Streptomyces avermitilis MA-468... 51 1e-04
BC070781_1(BC070781|pid:none) Xenopus laevis hypothetical protei... 51 1e-04
CP000384_956(CP000384|pid:none) Mycobacterium sp. MCS, complete ... 51 2e-04
(P22855) RecName: Full=Alpha-mannosidase; EC=3.2.1.24; ... 50 2e-04
AE014295_165(AE014295|pid:none) Bifidobacterium longum NCC2705, ... 50 2e-04
BA000016_856(BA000016|pid:none) Clostridium perfringens str. 13 ... 50 4e-04
CP000580_986(CP000580|pid:none) Mycobacterium sp. JLS, complete ... 50 4e-04
CP000575_1123(CP000575|pid:none) Staphylothermus marinus F1, com... 49 5e-04
CP000117_4424(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 49 5e-04
AJ851692_1(AJ851692|pid:none) Gallus gallus mRNA for hypothetica... 49 6e-04
AK049370_1(AK049370|pid:none) Mus musculus ES cells cDNA, RIKEN ... 49 6e-04
(Q91W89) RecName: Full=Alpha-mannosidase 2C1; EC=3.2.1.... 49 6e-04
CP000511_1233(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 49 6e-04
AE017262_2696(AE017262|pid:none) Listeria monocytogenes str. 4b ... 49 8e-04
CP000951_1232(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 49 8e-04
BC127332_1(BC127332|pid:none) Xenopus tropicalis hypothetical pr... 49 8e-04
CP001175_2765(CP001175|pid:none) Listeria monocytogenes HCC23, c... 49 8e-04
FM242711_2670(FM242711|pid:none) Listeria monocytogenes Clip8145... 49 8e-04
CU928171_457(CU928171|pid:none) Kluyveromyces thermotolerans str... 48 0.001
BA000001_864(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 48 0.001
AE016958_4121(AE016958|pid:none) Mycobacterium avium subsp. para... 48 0.001
AC141109_26(AC141109|pid:none) Medicago truncatula clone mth2-16... 48 0.001
AE016820_754(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 48 0.001
AM118080_130(AM118080|pid:none) Ustilago hordei mating type regi... 48 0.001
BA000004_791(BA000004|pid:none) Bacillus halodurans C-125 DNA, c... 48 0.001
CP000386_70(CP000386|pid:none) Rubrobacter xylanophilus DSM 9941... 47 0.002
CP000312_815(CP000312|pid:none) Clostridium perfringens SM101, c... 47 0.002
AE017262_2020(AE017262|pid:none) Listeria monocytogenes str. 4b ... 47 0.002
CP001077_709(CP001077|pid:none) Rhizobium etli CIAT 652 plasmid ... 47 0.002
CP000656_5074(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 47 0.002
CR380951_212(CR380951|pid:none) Candida glabrata strain CBS138 c... 47 0.002
AM263198_2035(AM263198|pid:none) Listeria welshimeri serovar 6b ... 47 0.002
CP001287_2348(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 47 0.002
AP007151_1252(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 47 0.003
AE000516_681(AE000516|pid:none) Mycobacterium tuberculosis CDC15... 47 0.003
AM408590_699(AM408590|pid:none) Mycobacterium bovis BCG Pasteur ... 47 0.003
CP000885_1701(CP000885|pid:none) Clostridium phytofermentans ISD... 47 0.003
AM920435_678(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 47 0.003
AY852252_1(AY852252|pid:none) Aspergillus fumigatus mannosidase ... 46 0.004
AK171110_1(AK171110|pid:none) Mus musculus NOD-derived CD11c +ve... 46 0.005
AM270031_2(AM270031|pid:none) Aspergillus niger contig An02c0370... 46 0.005
AM711867_359(AM711867|pid:none) Clavibacter michiganensis subsp.... 46 0.005
AF016850_1(AF016850|pid:none) Emericella nidulans alpha-mannosid... 45 0.007
AM236086_346(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 45 0.007
AG1326(AG1326) alpha-mannosidase homolog lmo2015 [imported] - Li... 45 0.007
AI1697(AI1697) alpha-mannosidase homolog lin2123 [imported] - Li... 45 0.009
CP001344_3392(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 45 0.012
AP009552_3651(AP009552|pid:none) Microcystis aeruginosa NIES-843... 45 0.012
CP000638_346(CP000638|pid:none) Agrobacterium vitis S4 plasmid p... 45 0.012
CP000393_2786(CP000393|pid:none) Trichodesmium erythraeum IMS101... 44 0.015
CP000629_1145(CP000629|pid:none) Agrobacterium radiobacter K84 c... 44 0.020
CP001115_67(CP001115|pid:none) Deinococcus deserti VCD115 plasmi... 44 0.026
BC105160_1(BC105160|pid:none) Bos taurus mannosidase, alpha, cla... 43 0.034
AM778919_42(AM778919|pid:none) Microcystis aeruginosa PCC 7806 g... 43 0.034
AF044414_1(AF044414|pid:none) Homo sapiens alpha mannosidase 6A8... 43 0.044
(Q9NTJ4) RecName: Full=Alpha-mannosidase 2C1; EC=3.2.1.... 43 0.044
(Q54K67) RecName: Full=Alpha-mannosidase G; EC=3.2.1.24; 43 0.044
AK301170_1(AK301170|pid:none) Homo sapiens cDNA FLJ60004 complet... 43 0.044
AB026114_1(AB026114|pid:none) Bacillus sp. GL1 gene for alpha-D-... 42 0.058
CP000312_2007(CP000312|pid:none) Clostridium perfringens SM101, ... 42 0.076
CR859257_1(CR859257|pid:none) Pongo abelii mRNA; cDNA DKFZp459I1... 41 0.13
AK173067_1(AK173067|pid:none) Mus musculus mRNA for mKIAA0935 pr... 41 0.13
CP001056_2049(CP001056|pid:none) Clostridium botulinum B str. Ek... 40 0.22
CU928160_1895(CU928160|pid:none) Escherichia coli IAI1 chromosom... 40 0.29
BA000039_290(BA000039|pid:none) Thermosynechococcus elongatus BP... 39 0.64
CP000264_2057(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 39 0.64
AF252302_1(AF252302|pid:none) Oncorhynchus mykiss shaker-related... 39 0.84
EU255911_11(EU255911|pid:none) Lactococcus lactis subsp. lactis ... 38 1.1
BA000038_1394(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 37 1.9
CP000813_215(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 37 1.9
AP008231_2388(AP008231|pid:none) Synechococcus elongatus PCC 630... 37 2.4
CP000100_1701(CP000100|pid:none) Synechococcus elongatus PCC 794... 37 2.4
CR380948_212(CR380948|pid:none) Candida glabrata strain CBS138 c... 37 3.2
AP006618_5545(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 36 5.4
EF215101_1(EF215101|pid:none) Callithrix jacchus clone M01-54.1_... 36 5.4
BT055369_1(BT055369|pid:none) Zea mays full-length cDNA clone ZM... 36 5.4
AM263198_2034(AM263198|pid:none) Listeria welshimeri serovar 6b ... 35 7.1
FN357542_10(FN357542|pid:none) Schistosoma mansoni genome sequen... 35 7.1
AM180355_2644(AM180355|pid:none) Clostridium difficile 630 compl... 35 7.1
CP000783_3216(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 35 7.1
AH1540(AH1540) transcription regulator homolog lin0864 [imported... 35 7.1
AM286745_10(AM286745|pid:none) Xenos vesparum partial mitochondr... 35 7.1
AL844505_76(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 35 9.3
(O94731) RecName: Full=Transport protein particle subunit trs85-... 35 9.3
AY459293_1(AY459293|pid:none) Plasmodium falciparum histone acet... 35 9.3
>(Q54YF7) RecName: Full=Alpha-mannosidase B; EC=3.2.1.24;
Flags: Precursor;
Length = 1035
Score = 668 bits (1723), Expect = 0.0
Identities = 321/341 (94%), Positives = 321/341 (94%)
Frame = +3
Query: 822 MGKXXXXXXXXXXXXTFINCTNNKILXXXXXXXXDNVINVFLIPHSHCDLGWVQTLEEYY 1001
MGK TFINCTNNKIL DNVINVFLIPHSHCDLGWVQTLEEYY
Sbjct: 1 MGKVLILFLFVLLLITFINCTNNKILNNENSSNEDNVINVFLIPHSHCDLGWVQTLEEYY 60
Query: 1002 SENVTVILDNVINTLIKDSSKKFNWAEIYYFETWWNEQSSFLQAQVRNLVNNGQLYFVGG 1181
SENVTVILDNVINTLIKDSSKKFNWAEIYYFETWWNEQSSFLQAQVRNLVNNGQLYFVGG
Sbjct: 61 SENVTVILDNVINTLIKDSSKKFNWAEIYYFETWWNEQSSFLQAQVRNLVNNGQLYFVGG 120
Query: 1182 GWAQNDEGATHYQAVINQMTLGHQFLLSEFGVVPEIGWQIDPFGPSTLTATLFSLMGFKY 1361
GWAQNDEGATHYQAVINQMTLGHQFLLSEFGVVPEIGWQIDPFGPSTLTATLFSLMGFKY
Sbjct: 121 GWAQNDEGATHYQAVINQMTLGHQFLLSEFGVVPEIGWQIDPFGPSTLTATLFSLMGFKY 180
Query: 1362 HVINRIDERIKYIYNDTPDIVGSGWMTTDRSFEFQWYPSHNDQELSIFTHVLDHHYNSPY 1541
HVINRIDERIKYIYNDTPDIVGSGWMTTDRSFEFQWYPSHNDQELSIFTHVLDHHYNSPY
Sbjct: 181 HVINRIDERIKYIYNDTPDIVGSGWMTTDRSFEFQWYPSHNDQELSIFTHVLDHHYNSPY 240
Query: 1542 LIYPNASNPNQSLTTGFDFESDPTQNPPINQSNIYERAAVFVEIMQQRSQLYRHNNLLIP 1721
LIYPNASNPNQSLTTGFDFESDPTQNPPINQSNIYERAAVFVEIMQQRSQLYRHNNLLIP
Sbjct: 241 LIYPNASNPNQSLTTGFDFESDPTQNPPINQSNIYERAAVFVEIMQQRSQLYRHNNLLIP 300
Query: 1722 FGNDFRFQNASLEFDNMDKLITYINSNSSWGVTIQYATLNE 1844
FGNDFRFQNASLEFDNMDKLITYINSNSSWGVTIQYATLNE
Sbjct: 301 FGNDFRFQNASLEFDNMDKLITYINSNSSWGVTIQYATLNE 341
Score = 443 bits (1140), Expect = e-123
Identities = 222/235 (94%), Positives = 222/235 (94%)
Frame = +1
Query: 1 TSNFYPMINTGYIVDQQVSDYQQQLTILSKQTFGASXXTNGEFEVLLIRRSNYTQWSVHE 180
TSNFYPMINTGYIVDQQVSDYQQQLTILSKQTFGAS TNGEFEVLLIRRSNYTQWSVHE
Sbjct: 801 TSNFYPMINTGYIVDQQVSDYQQQLTILSKQTFGASSQTNGEFEVLLIRRSNYTQWSVHE 860
Query: 181 PMNDTSNPSLRVLCIFGDPNFSNEIRTPHSILFENPLQPVYSLIPNSIPIEKYIDTYNTL 360
PMNDTSNPSLRVLCIFGDPNFSNEIRTPHSILFENPLQPVYSLIPNSIPIEKYIDTYNTL
Sbjct: 861 PMNDTSNPSLRVLCIFGDPNFSNEIRTPHSILFENPLQPVYSLIPNSIPIEKYIDTYNTL 920
Query: 361 FKPLQTSLPYNLHLLTFTKQWIDSPSIIMRLINIYEIGQSINFSKSINFNIGSGDXXXXX 540
FKPLQTSLPYNLHLLTFTKQWIDSPSIIMRLINIYEIGQSINFSKSINFNIGSGD
Sbjct: 921 FKPLQTSLPYNLHLLTFTKQWIDSPSIIMRLINIYEIGQSINFSKSINFNIGSGDNNNNN 980
Query: 541 XXXXXXGFLTHYNISQIIETTLSANSELSNPTNNLVITLEPLEIKTFLLTLSPKQ 705
GFLTHYNISQIIETTLSANSELSNPTNNLVITLEPLEIKTFLLTLSPKQ
Sbjct: 981 NNNNNNGFLTHYNISQIIETTLSANSELSNPTNNLVITLEPLEIKTFLLTLSPKQ 1035
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,886,805,021
Number of extensions: 58857685
Number of successful extensions: 143831
Number of sequences better than 10.0: 197
Number of HSP's gapped: 143532
Number of HSP's successfully gapped: 230
Length of query: 615
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 480
Effective length of database: 614,245,399
Effective search space: 294837791520
Effective search space used: 294837791520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
2 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
2 |
| FC-IC (SUB) |
0 |