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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U03193-1
Contig ID Contig-U03193-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U03193-1 (Contig-U03193-1Q) /CSM_Contig/Contig-U03193-1Q.Seq.d
TATATAATTAAATAAAAATAAAAAAAAAACACAAAATGATNTCAAAAGCA
ATTTGTGTTGGTATAGTTGGTATGCTTTATGGAGCATCAATGGCATTAGC
TCAGACTAATTTAGATAATTCCCAAAGNGTTTTAATTTATAATAATTGGG
TTAGAAATATTGGGTCAACATTTGGTCTTCAACAATCTCAATCAGTTCCA
ACAGATTTTGTAACAAATATTAATACAATTCAAAGTGGAAATTTAGCAAG
AACACCTGGTAGTTATAAACTTGGATATAACTCTTATTCAGCTACAAATG
CACAGGCATTCCANAATGGACATATTGCTGGATCAAATATTGGTTTATAT
CCAATGAATGGTACAAACCTATGGAATACTAAAGGTAATGGTATTGCAGG
TGGTACATTGGCTGGTATTATAGTTGGGTCAGTTTTGGGTGGTTTATTAG
TGCTCGTTGGTATGATATCCGCATTCATTTCATGGAGAANACATATGGAA
TTGAAGAAATCTACCTTATATGCAGATTATAGAAGCAATTACAAGGCTGA
ACCAATTCCTGATATTAAAGATCACGTTCCATCTGAATACTATCGTGAAT
CACATCGTATTGGTCTTAATCAAGGTTACAATGTTGATTCAGTTACTTCA
ACNCGTTATANAGAGAATAATAATCCCCAGTTATGTTAATANAGAAAATC
ATGAAGTTACCATACCACGNACTGCCTCAGATATTAATAATAATAATGCA
ACNCATATCACAAATGCCCATAATCATTAANAAAAAAAAAN
Gap no gap
Contig length 791
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4003507
End point 4002716
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U03193
List of clone(s) 

est1=CFE488E,1,792
Translated Amino Acid sequence 
yn*IKIKKKHKMXSKAICVGIVGMLYGASMALAQTNLDNSQXVLIYNNWVRNIGSTFGLQ
QSQSVPTDFVTNINTIQSGNLARTPGSYKLGYNSYSATNAQAFXNGHIAGSNIGLYPMNG
TNLWNTKGNGIAGGTLAGIIVGSVLGGLLVLVGMISAFISWRXHMELKKSTLYADYRSNY
KAEPIPDIKDHVPSEYYRESHRIGLNQGYNVDSVTSTRYXENNNPQLC*xrks*syhttx
clry****cnxyhkcp*slxkkx
Translated Amino Acid sequence (All Frames) 
Frame A:
yiik*k*kkntk*xqkqfvlv*lvcfmehqwh*lrli*iipkxf*fiiigleilgqhlvf
nnlnqfqqil*qiliqfkvei*qehlvvinlditliqlqmhrhsxmdilldqilvyiq*m
vqtygilkvmvlqvvhwlvl*lgqfwvvy*cslv*yphsfhgexiwn*rnlpymqiieai
trlnqflilkitfhlntivnhivlvlikvtmliqllqxvixriiipsyvnxenhevtipr
tasdinnnnathitnahnh*xkk


Frame B:
i*lnknkkktqndxksnlcwyswyalwsingissd*fr*fpkxfnl**lg*kywvniwss
tisissnrfcnky*ynskwkfskntw*l*twi*llfsykctgipxwtycwikywfisnew
ykpmey*r*wycrwyigwyyswvsfgwfisarwydirihfmextygieeiylicrl*kql
qg*tns*y*rsrsi*ils*itsyws*srlqc*fsyfnxlxre**spvmlixkimklpyhx
lpqiliiimqxisqmpiiixkkk


Frame C:
yn*IKIKKKHKMXSKAICVGIVGMLYGASMALAQTNLDNSQXVLIYNNWVRNIGSTFGLQ
QSQSVPTDFVTNINTIQSGNLARTPGSYKLGYNSYSATNAQAFXNGHIAGSNIGLYPMNG
TNLWNTKGNGIAGGTLAGIIVGSVLGGLLVLVGMISAFISWRXHMELKKSTLYADYRSNY
KAEPIPDIKDHVPSEYYRESHRIGLNQGYNVDSVTSTRYXENNNPQLC*xrks*syhttx
clry****cnxyhkcp*slxkkx
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U03193-1 (Contig-U03193-1Q)
/CSM_Contig/Contig-U03193-1Q.Seq.d
         (791 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U03193-1 (Contig-U03193-1Q) /CSM_Contig/Conti...  1435  0.0
Contig-U12548-1 (Contig-U12548-1Q) /CSM_Contig/Conti...    38  0.014
Contig-U10961-1 (Contig-U10961-1Q) /CSM_Contig/Conti...    36  0.056
Contig-U09342-1 (Contig-U09342-1Q) /CSM_Contig/Conti...    36  0.056
Contig-U09165-1 (Contig-U09165-1Q) /CSM_Contig/Conti...    36  0.056
Contig-U08000-1 (Contig-U08000-1Q) /CSM_Contig/Conti...    36  0.056
Contig-U03847-1 (Contig-U03847-1Q) /CSM_Contig/Conti...    36  0.056
Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Conti...    36  0.056
Contig-U12845-1 (Contig-U12845-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U01095-1 (Contig-U01095-1Q) /CSM_Contig/Conti...    34  0.22

>Contig-U03193-1 (Contig-U03193-1Q) /CSM_Contig/Contig-U03193-1Q.Seq.d
          Length = 791

 Score = 1435 bits (724), Expect = 0.0
 Identities = 751/751 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  cacaaaatgatntcaaaagcaatttgtgttggtatagttggtatgctttatggagcatca 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  cacaaaatgatntcaaaagcaatttgtgttggtatagttggtatgctttatggagcatca 89

                                                                       
Query: 90  atggcattagctcagactaatttagataattcccaaagngttttaatttataataattgg 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  atggcattagctcagactaatttagataattcccaaagngttttaatttataataattgg 149

                                                                       
Query: 150 gttagaaatattgggtcaacatttggtcttcaacaatctcaatcagttccaacagatttt 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gttagaaatattgggtcaacatttggtcttcaacaatctcaatcagttccaacagatttt 209

                                                                       
Query: 210 gtaacaaatattaatacaattcaaagtggaaatttagcaagaacacctggtagttataaa 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtaacaaatattaatacaattcaaagtggaaatttagcaagaacacctggtagttataaa 269

                                                                       
Query: 270 cttggatataactcttattcagctacaaatgcacaggcattccanaatggacatattgct 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cttggatataactcttattcagctacaaatgcacaggcattccanaatggacatattgct 329

                                                                       
Query: 330 ggatcaaatattggtttatatccaatgaatggtacaaacctatggaatactaaaggtaat 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggatcaaatattggtttatatccaatgaatggtacaaacctatggaatactaaaggtaat 389

                                                                       
Query: 390 ggtattgcaggtggtacattggctggtattatagttgggtcagttttgggtggtttatta 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggtattgcaggtggtacattggctggtattatagttgggtcagttttgggtggtttatta 449

                                                                       
Query: 450 gtgctcgttggtatgatatccgcattcatttcatggagaanacatatggaattgaagaaa 509
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtgctcgttggtatgatatccgcattcatttcatggagaanacatatggaattgaagaaa 509

                                                                       
Query: 510 tctaccttatatgcagattatagaagcaattacaaggctgaaccaattcctgatattaaa 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tctaccttatatgcagattatagaagcaattacaaggctgaaccaattcctgatattaaa 569

                                                                       
Query: 570 gatcacgttccatctgaatactatcgtgaatcacatcgtattggtcttaatcaaggttac 629
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gatcacgttccatctgaatactatcgtgaatcacatcgtattggtcttaatcaaggttac 629

                                                                       
Query: 630 aatgttgattcagttacttcaacncgttatanagagaataataatccccagttatgttaa 689
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aatgttgattcagttacttcaacncgttatanagagaataataatccccagttatgttaa 689

                                                                       
Query: 690 tanagaaaatcatgaagttaccataccacgnactgcctcagatattaataataataatgc 749
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tanagaaaatcatgaagttaccataccacgnactgcctcagatattaataataataatgc 749

                                          
Query: 750 aacncatatcacaaatgcccataatcattaa 780
           |||||||||||||||||||||||||||||||
Sbjct: 750 aacncatatcacaaatgcccataatcattaa 780


>Contig-U12548-1 (Contig-U12548-1Q) /CSM_Contig/Contig-U12548-1Q.Seq.d
          Length = 1214

 Score = 38.2 bits (19), Expect = 0.014
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 729  agatattaataataataat 747
            |||||||||||||||||||
Sbjct: 1102 agatattaataataataat 1120


>Contig-U10961-1 (Contig-U10961-1Q) /CSM_Contig/Contig-U10961-1Q.Seq.d
          Length = 1654

 Score = 36.2 bits (18), Expect = 0.056
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 731 atattaataataataatgcaac 752
           ||||||||||||||||| ||||
Sbjct: 198 atattaataataataatacaac 219


 Score = 30.2 bits (15), Expect = 3.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 729  agatattaataataa 743
            |||||||||||||||
Sbjct: 1516 agatattaataataa 1530


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,741
Number of Sequences: 6905
Number of extensions: 19741
Number of successful extensions: 8227
Number of sequences better than 10.0: 364
length of query: 791
length of database: 5,674,871
effective HSP length: 16
effective length of query: 775
effective length of database: 5,564,391
effective search space: 4312403025
effective search space used: 4312403025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.27
Homology vs DNA 
Query= Contig-U03193-1 (Contig-U03193-1Q) /CSM_Contig/Contig-U03193-1Q.Seq.d
         (791 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ361127) Dictyostelium discoideum cDNA clone:ddc9p22, 5' e...  1086   0.0    1
(BJ374706) Dictyostelium discoideum cDNA clone:ddc9p22, 3' e...   476   e-130  1
(BX927241) Zebrafish DNA sequence from clone DKEY-184P18 in ...    40   0.37   6
(AC212306) Solanum lycopersicum cv. Heinz 1706, chromosome 0...    48   0.52   1
(CX285483) intestine-2-F10-T3 Paralichthys olivaceus cDNA li...    48   0.52   1
(CX284279) skin-1-H11-T3 Paralichthys olivaceus cDNA library...    48   0.52   1
(CX283398) gill2-D07 Paralichthys olivaceus cDNA library Par...    48   0.52   1
(CX283311) gill1-D08 Paralichthys olivaceus cDNA library Par...    48   0.52   1
(CX283015) eyes1-B04 Paralichthys olivaceus cDNA library Par...    48   0.52   1
(C23482) Paralichthys olivaceus liver cDNA, clone: LG11(10).       48   0.52   1
(FE042774) 050512-gill-2-G5-T3.ab1 Paralichthys olivaceus gi...    48   0.52   1
(EU346694) Haemonchus contortus mitochondrion, complete genome.    44   0.54   3
(BZ386138) EINDF77TF EI_10_12_KB Entamoeba invadens genomic ...    36   1.2    2
(ER364340) 1093018950844 Global-Ocean-Sampling_GS-34-01-01-1...    38   1.3    2
(DU504339) 1098553495197 CHORI-243 Ovis aries genomic clone ...    36   1.5    2
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    42   1.7    4
(AC160890) Loxodonta africana clone VMRC15-244C11, WORKING D...    46   2.0    1
(AC158451) Loxodonta africana clone VMRC15-36A24, WORKING DR...    46   2.0    1
(AC158450) Loxodonta africana clone VMRC15-294C15, WORKING D...    46   2.0    1
(AC201345) Strongylocentrotus purpuratus clone R3-16P15, WOR...    46   2.0    1
(AC184666) Strongylocentrotus purpuratus clone R3-3016G10, W...    46   2.0    1
(AC180003) Strongylocentrotus purpuratus clone R3-16P13, WOR...    46   2.0    1
(AC179867) Strongylocentrotus purpuratus clone R3-1007B8, WO...    46   2.0    1
(AC178182) Strongylocentrotus purpuratus clone R3-3082C20, W...    46   2.0    1
(AC168796) Strongylocentrotus purpuratus clone R3-13J11, WOR...    46   2.0    1
(EJ030003) 1095454043630 Global-Ocean-Sampling_GS-26-01-01-1...    46   2.0    1
(FG742984) G1145P311RF12.T0 Anolis carolinensis pooled norma...    46   2.0    1
(FG742936) G1145P311FF12.T0 Anolis carolinensis pooled norma...    46   2.0    1
(EK268292) 1095462242612 Global-Ocean-Sampling_GS-31-01-01-1...    30   2.7    3
(EK279801) 1095462291188 Global-Ocean-Sampling_GS-31-01-01-1...    30   2.8    3
(AC166721) Bos taurus clone CH240-185J6, WORKING DRAFT SEQUE...    34   3.9    2
(AC174608) Cavia porcellus clone CH234-15B15, WORKING DRAFT ...    32   3.9    2
(AM612221) Entamoeba invadens IP1 GSS, clone inv019a12.q1k.        42   4.3    2
(BX255912) Zebrafish DNA sequence from clone CH211-267H23 in...    40   4.6    5
(CT530360) A BAC library has been constructed from cultivar ...    34   4.8    2
(AB024028) Arabidopsis thaliana genomic DNA, chromosome 3, T...    44   8.1    1
(FP102208) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.1    1
(CU855642) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.1    1
(AC179325) Strongylocentrotus purpuratus clone R3-57E10, WOR...    44   8.1    1
(AC176489) Strongylocentrotus purpuratus clone R3-307108, WO...    44   8.1    1
(AC174733) Strongylocentrotus purpuratus clone R3-3071D8, WO...    44   8.1    1
(EK197667) 1095460044945 Global-Ocean-Sampling_GS-31-01-01-1...    44   8.1    1
(CZ236697) AIAA-aag04k01.g1 Ancylostoma caninum whole genome...    44   8.1    1
(CZ226258) AIAA-aae52p22.g1 Ancylostoma caninum whole genome...    44   8.1    1
(CB037509) Tc_ad2_34G10_TEXF1 Teladorsagia circumcincta adul...    44   8.1    1
(BF636543) NF089D03DT1F1029 Drought Medicago truncatula cDNA...    44   8.1    1
(AW276748) xp65d06.x1 NCI_CGAP_Ov39 Homo sapiens cDNA clone ...    44   8.1    1
(BX663532) Zebrafish DNA sequence from clone DKEY-27K11 in l...    40   8.8    3

>(BJ361127) Dictyostelium discoideum cDNA clone:ddc9p22, 5' end,
           single read.
          Length = 589

 Score = 1086 bits (548), Expect = 0.0
 Identities = 560/560 (100%)
 Strand = Plus / Plus


Query: 30  cacaaaatgatntcaaaagcaatttgtgttggtatagttggtatgctttatggagcatca 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  cacaaaatgatntcaaaagcaatttgtgttggtatagttggtatgctttatggagcatca 89


Query: 90  atggcattagctcagactaatttagataattcccaaagngttttaatttataataattgg 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  atggcattagctcagactaatttagataattcccaaagngttttaatttataataattgg 149


Query: 150 gttagaaatattgggtcaacatttggtcttcaacaatctcaatcagttccaacagatttt 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gttagaaatattgggtcaacatttggtcttcaacaatctcaatcagttccaacagatttt 209


Query: 210 gtaacaaatattaatacaattcaaagtggaaatttagcaagaacacctggtagttataaa 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gtaacaaatattaatacaattcaaagtggaaatttagcaagaacacctggtagttataaa 269


Query: 270 cttggatataactcttattcagctacaaatgcacaggcattccanaatggacatattgct 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cttggatataactcttattcagctacaaatgcacaggcattccanaatggacatattgct 329


Query: 330 ggatcaaatattggtttatatccaatgaatggtacaaacctatggaatactaaaggtaat 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggatcaaatattggtttatatccaatgaatggtacaaacctatggaatactaaaggtaat 389


Query: 390 ggtattgcaggtggtacattggctggtattatagttgggtcagttttgggtggtttatta 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggtattgcaggtggtacattggctggtattatagttgggtcagttttgggtggtttatta 449


Query: 450 gtgctcgttggtatgatatccgcattcatttcatggagaanacatatggaattgaagaaa 509
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtgctcgttggtatgatatccgcattcatttcatggagaanacatatggaattgaagaaa 509


Query: 510 tctaccttatatgcagattatagaagcaattacaaggctgaaccaattcctgatattaaa 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tctaccttatatgcagattatagaagcaattacaaggctgaaccaattcctgatattaaa 569


Query: 570 gatcacgttccatctgaata 589
           ||||||||||||||||||||
Sbjct: 570 gatcacgttccatctgaata 589

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 791,810,712
Number of extensions: 48952709
Number of successful extensions: 6171489
Number of sequences better than 10.0: 48
Length of query: 791
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 767
Effective length of database: 99,340,224,878
Effective search space: 76193952481426
Effective search space used: 76193952481426
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.22
Homology vs Protein 
Query= Contig-U03193-1 (Contig-U03193-1Q) /CSM_Contig/Contig-U03193-1Q.Seq.d
         (791 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001111_854(CP001111|pid:none) Stenotrophomonas maltophilia R55...    39   0.19
AM743169_953(AM743169|pid:none) Stenotrophomonas maltophilia K27...    38   0.43
CR382135_615(CR382135|pid:none) Debaryomyces hansenii strain CBS...    36   1.2
AL844594_2(AL844594|pid:none) Mouse DNA sequence from clone RP23...    34   6.2
AK074089_1(AK074089|pid:none) Homo sapiens mRNA for FLJ00160 pro...    34   6.2
(Q5H9F3) RecName: Full=BCoR-like protein 1;          Short=BCoR-...    34   6.2
(A2AQH4) RecName: Full=BCoR-like protein 1;          Short=BCoR-...    34   6.2
AC148775_25(AC148775|pid:none) Medicago truncatula chromosome 2 ...    33   8.1
CP000139_479(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ...    33   8.1

>CP001111_854(CP001111|pid:none) Stenotrophomonas maltophilia R551-3,
            complete genome.
          Length = 3629

 Score = 38.9 bits (89), Expect = 0.19
 Identities = 30/86 (34%), Positives = 38/86 (44%)
 Frame = +3

Query: 159  IGSTFGLQQSQSVPTDFVTNINTIQSGNLARTPGSYKLGYNSYSATNAQAFXNGHIAGSN 338
            I  T GL Q+ S  T  +T  NT   G    T G+ +LG             NG   GS
Sbjct: 2802 ISGTGGLTQAGS-GTLVLTGTNTYTGGTTINTGGTLQLG-------------NGGATGSI 2847

Query: 339  IGLYPMNGTNLWNTKGNGIAGGTLAG 416
            +G    NGT + N  GN   GGT++G
Sbjct: 2848 VGDVINNGTLVSNVAGNTTLGGTISG 2873

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,136,484,318
Number of extensions: 21839211
Number of successful extensions: 59489
Number of sequences better than 10.0: 9
Number of HSP's gapped: 59234
Number of HSP's successfully gapped: 9
Length of query: 263
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 137
Effective length of database: 643,374,430
Effective search space: 88142296910
Effective search space used: 88142296910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.80  gvh: 0.58  alm: 0.19  top: 0.03  tms: 0.13  mit: 0.22  mip: 0.26
 nuc: 0.05  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 36.0 %: endoplasmic reticulum
	 28.0 %: mitochondrial
	  8.0 %: extracellular, including cell wall
	  8.0 %: plasma membrane
	  8.0 %: nuclear
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system
	  4.0 %: cytoplasmic

>> prediction for Contig-U03193-1 is end
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0