Contig-U15915-1
Contig ID Contig-U15915-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15915-1 (Contig-U15915-1Q) /CSM_Contig/Contig-U15915-1Q.Seq.d
AATAAAAAATTAAATAAAGTAATAATAGTAATAAAATAATATATATAATT
AAAATGGCAAAGAAACATTCAAGAGAAGAAACAATAACATCACCAAGTCC
AAGTGGAAATACAACTACAACATCTACAACAAGTCCAACATCAACAACAC
CAACAAAAGAAAAAAAGAACAAAAATTTCAAATGGAAATAATAAAGAAAA
AGAAACCAATAGTAATAATAATATAAATACAAGTAATACAAATATTTTAA
ATGGTAGTGTTAATAGTTTAAATAATAGTAGTACAAATTTATTTACAACA
CATCAAAATAATCCAGTAAAGAATTTAAAAGGATTTGATGATATTGGTGA
AGGTATACTTAGATTCGAAGGATCAAAAGAAATTGATTTCATTGGATCAG
TAAAGAGAGTTCATTCAATGATGAAAGATTATTTAAAGAAAACTCCACAA
TATGATTACGAATTATTAAGTCAATTATTCAAATGTGATTTACAATTGAA
ATTAGAGAATCTTCAATTGTTTGGTGATATTTATGTTAGAAATTGTTTTA
GTATCCTTTTATCAAATTATTTTAATCAAGCCAAAGATTTAGGTAAAGAG
TTTAGACAAATTGGTGGTTTCGTTTTAGTGATTAATCCAATGGATATTGA
AAGTCAACCAATGGTAACTGGTAGTATTTTAACTGCTCTTCATTTAAAAA
TGAAATGTATTATTTATGTTGGTCCTGGTAATTTACCATTATCACAAATT
ACAAGATTATATATGTGTCATGCTAGAGGTGCAAAAATTATATTTCATAA
AGGTGATGTATCATCATGTTATACAAGAGCATGGCAACATGCAAAAGATA
TGAGTATGGTATTTTTAGATTGTAAATTTATACCACATTTTAGTTTATTG
GGTGCAGCAACTATTGCACATGAAATGATGGAGGATAGTCCAGATAGGGA
GACAATTATCATACCATTAAGATTATATTCACAGGGTTGGAGTTATGTCA
GTGGTATTTCAATTTTCTATAAGATTATGAAACCTGAAATCAAGATTATA
GTAGTTCAAATGACTGATGATCTCTTTGGTAAAGATATTGAAGGTAAAGA
ATTTAATAGACAATCATTATTCCCTGACCGTTTAGAGATTGGTTGGTTAG
CATTAATTCATGATCAATCAGATCTTACCAATGTTTTCGACGCTTTCGAT
TCAAGAAATCAAGGTAAATTCTCTGATAAAGATTTAGAGGCATTATTGAT
AAGCATTGGTGGTGATCCAACTAGAAATAAATCAATGTGTCCAAAATCAT
CACTTTCTCAAACTGAATTTGTTCATGAAGTAATCACAGAGATCACAAAT
GGTTTAGAGCAATTGGAGGAGAAATTTAGCTACTTTTTACCACAATTCAA
ATTGGATAACTTAATCAATCATAAAATCATCGATCAATTAGTAACAGCAA
CCGAGGATCAAGCTTCAATCGCTTTCATTAAATGTTTAGAGTATACCCAT
ACTCTCACCAATGGTAAGGGTTCAATTGCTTTGGGTGGTCTAATGAGTGG
TAATATTCATTTAAGACCCGATGAAAAAGTATTGGTTATGTTATCAGGTG
GTTATGTCGATGTAATCGATTTTCAAACTATTTTAAACTATGGTTTAGAT
ATCACTGGTCAAAGCTTTGAAATTGAATTGGATTTACCCGATAATACTAC
ATCACTAAATAAAGTATTAAATGTTATTGGTGAAAATAAAGTATCAGTTA
TGGAGGTATTAATGGATCGTTCTTGTGAAACTTTAAAACAATATCATGT-
---------CCAATCAATTCCGTTATATCGAACCAGCAGTTTTATCATTG
GCCGATGGTACAAGTGTAAAGATGCCAGGTGGTGTACACACTCAAGTACT
TCATGATATGGTCGATGAGTATGTAACCGTTAGTGAAAATGAAATCGCTT
CGACCATAGTTCATCTACTTTATAATAGTCGTACAGTTTCAGAGGGTGCA
GGTTGTTTAGGTTTGGCTGCATTAATGCATAAGAAAATTAAAGTTAGAAA
GGATGAAAGGGTTTGTGTCATCATTTGTGGTGGTAATATCGATATGTCAA
CACTTCGTCAAGTCTATGAATATGGTTTACGTTCACTTGGTCGTTCTTTC
ACAATTCATTTAACAACTTGGGATTATCCTGGGACCCTAAGTAAAATCAT
TGGTTTGGCTGCCCGTGCCGAATTAAAAGTTCGTGAAATTAGACATATCC
GTGGTGGTGGTAATATCAATTGGAATGAAGTTATCATTTCCCTCTCCTTC
TATAGTAACTCTTTTAATCATCAAAACTTTTTCTTATCTCTATTGGCTCA
AGAAGGTCTCTTCCCAAAGATTGTCGGTAGAAAATACATTAAAGATAATG
AAATAGTCTATAAAATTTTCGATAAATCTGTTGATAAAAAGAATAAAGAA
TTAAAAGATACCTTTTCAGAAAGACAACAACTATTTTTAGAACAATATGG
AAAACAAGCCAATGTTTCTTTGGAAAGTAAAATGAATTAAAAAATTTTTT
AAATAAATAATAAAAAAAAAAATAATAATAATAATATACAAATAAAATTA
TAAAATAAAATTCAAACATATATATTTAAGGAAATAAATAAAATAAATAA
AACTTATATATATATATTATTATCATTATTATTATTAT

Gap gap included
Contig length 2678
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7778376
End point 7781053
Strand (PLUS/MINUS) PLUS
Number of clones 8
Number of EST 13
Link to clone list U15915
List of clone(s)

est1=VHP242F,1,540
est2=SHL549F,41,634
est3=VHN405F,332,872
est4=VHE765F,444,936
est5=SHK237F,848,1453
est6=CHI883F,1211,1799
est7=VHN405Z,1800,2543
est8=VHP242Z,1886,2579
est9=VHE765Z,1914,2072
est10=SHL549Z,1973,2649
est11=FCL-AD05Z,1995,2664
est12=CHI883Z,2080,2624
est13=SHK237Z,2084,2678
Translated Amino Acid sequence
nkklnkviivik*yi*lkwqrniqekkq*HHQVQVEIQLQHLQQVQHQQHQQKKKRTKIS
NGNNKEKETNSNNNINTSNTNILNGSVNSLNNSSTNLFTTHQNNPVKNLKGFDDIGEGIL
RFEGSKEIDFIGSVKRVHSMMKDYLKKTPQYDYELLSQLFKCDLQLKLENLQLFGDIYVR
NCFSILLSNYFNQAKDLGKEFRQIGGFVLVINPMDIESQPMVTGSILTALHLKMKCIIYV
GPGNLPLSQITRLYMCHARGAKIIFHKGDVSSCYTRAWQHAKDMSMVFLDCKFIPHFSLL
GAATIAHEMMEDSPDRETIIIPLRLYSQGWSYVSGISIFYKIMKPEIKIIVVQMTDDLFG
KDIEGKEFNRQSLFPDRLEIGWLALIHDQSDLTNVFDAFDSRNQGKFSDKDLEALLISIG
GDPTRNKSMCPKSSLSQTEFVHEVITEITNGLEQLEEKFSYFLPQFKLDNLINHKIIDQL
VTATEDQASIAFIKCLEYTHTLTNGKGSIALGGLMSGNIHLRPDEKVLVMLSGGYVDVID
FQTILNYGLDITGQSFEIELDLPDNTTSLNKVLNVIGENKVSVMEVLMDRSCETLKQYH-
--

---NQFRYIEPAVLSLADGTSVKMPGGVHTQVLHDMVDEYVTVSENEIASTIVHLLYNSR
TVSEGAGCLGLAALMHKKIKVRKDERVCVIICGGNIDMSTLRQVYEYGLRSLGRSFTIHL
TTWDYPGTLSKIIGLAARAELKVREIRHIRGGGNINWNEVIISLSFYSNSFNHQNFFLSL
LAQEGLFPKIVGRKYIKDNEIVYKIFDKSVDKKNKELKDTFSERQQLFLEQYGKQANVSL
ESKMN*kif*innkkknnnnniqikl*nkiqtyifkeinkinktyiyillsllll


Translated Amino Acid sequence (All Frames)
Frame A:
nkklnkviivik*yi*lkwqrniqekkq*HHQVQVEIQLQHLQQVQHQQHQQKKKRTKIS
NGNNKEKETNSNNNINTSNTNILNGSVNSLNNSSTNLFTTHQNNPVKNLKGFDDIGEGIL
RFEGSKEIDFIGSVKRVHSMMKDYLKKTPQYDYELLSQLFKCDLQLKLENLQLFGDIYVR
NCFSILLSNYFNQAKDLGKEFRQIGGFVLVINPMDIESQPMVTGSILTALHLKMKCIIYV
GPGNLPLSQITRLYMCHARGAKIIFHKGDVSSCYTRAWQHAKDMSMVFLDCKFIPHFSLL
GAATIAHEMMEDSPDRETIIIPLRLYSQGWSYVSGISIFYKIMKPEIKIIVVQMTDDLFG
KDIEGKEFNRQSLFPDRLEIGWLALIHDQSDLTNVFDAFDSRNQGKFSDKDLEALLISIG
GDPTRNKSMCPKSSLSQTEFVHEVITEITNGLEQLEEKFSYFLPQFKLDNLINHKIIDQL
VTATEDQASIAFIKCLEYTHTLTNGKGSIALGGLMSGNIHLRPDEKVLVMLSGGYVDVID
FQTILNYGLDITGQSFEIELDLPDNTTSLNKVLNVIGENKVSVMEVLMDRSCETLKQYH-
--

---pinsvisnqqfyhwpmvqv*rcqvvytlkyfmiwsmsm*plvkmkslrp*fiyfiiv
vqfqrvqvv*vwlh*cirklklermkgfvssfvvvisicqhfvksmnmvyvhlvvlsqfi
*qlgiilgp*vkslvwlpvpn*kfvkldisvvvvisigmklsfpspsivtlliiktfsyl
ywlkkvssqrlsventlkimk*sikfsinllikrikn*kipfqkdnnyf*nnmenkpmfl
wkvk*ikkffk*iikkkiiiiiyk*nykikfkhiylrk*ik*ikliyiyyyhyyyy

Frame B:
ikn*ik*****nniyn*ngketfkrrnnnitkskwkynyniynksninntnkrkkeqkfq
meiikkkkpiviii*iqviqif*mvvliv*iivvqiylqhikiiq*ri*kdlmilvkvyl
dskdqkklisldq*refiq**kii*rklhnmitny*vnysnviyn*n*rifnclvifmle
ivlvsfyqiilikpki*vksldklvvsf**liqwilkvnqw*lvvf*llfi*k*nvlfml
vlviyhyhklqdyicvmlevqklyfikvmyhhviqehgnmqki*vwyf*ivnlyhilvyw
vqqllhmk*wrivqigrqlsyh*dyihrvgvmsvvfqfsirl*nlksrl**fk*lmislv
kilkvknlidnhysltv*rlvg*h*fminqilpmfstlsiqeikvnsliki*rhy**alv
viqleinqcvqnhhflklnlfmk*sqrsqmv*snwrrnlatfyhnsnwit*siikssin*
*qqpriklqslslnv*sipilspmvrvqllwvv**vvifi*dpmkkywlcyqvvmsm*si
fklf*tmv*islvkalklnwiypiilhh*iky*mllvkikyqlwry*wivlvkl*nnim-
--

---qsiplyrtssfiigrwykckdarwcthssts*ygr*vcnr**k*nrfdhssstl**s
ysfrgcrlfrfgcina*en*s*kg*kglchhlww*yryvntsssl*iwftftwsffhnsf
nnlglswdpk*nhwfgcpcrikss*n*typwww*yqle*syhfplll**lf*ssklflis
igsrrslpkdcr*kih*r**nsl*nfr*ic**ke*rikrylfrktttifrtiwktsqcff
gk*nelknflnk**kkk****ytnkiik*nsniyi*gnk*nk*nlyiyiiiiiii

Frame C:
*kik*snnsnkiiyiikmakkhsreetitspspsgnttttsttsptsttptkekknknfk
wk**rkrnq****ykyk*ykyfkw*c**fk***ykfiyntsk*sskefkri**yw*ryt*
irrikrn*fhwiskessfnderlfkensti*lriiksiiqm*ftieiressivw*ylc*k
lf*ypfiklf*ssqrfr*rv*tnwwfrfsd*sngy*kstngnw*yfncssfknemyylcw
sw*ftiitnykiiyvsc*rcknyis*r*ciimlyksmatckryeygifrl*iyttf*fig
csnyct*ndgg*sr*gdnyhtikiiftglelcqwyfnfl*dyet*nqdysssnd**slw*
ry*r*ri**tiiip*pfrdwlvsins*sirsyqcfrrfrfkksr*il**rfrgiidkhww
*sn*k*invskiitfsn*ics*snhrdhkwfraiggei*llfttiqig*lnqs*nhrsis
nsnrgssfnrfh*mfrvypyshqw*gfncfgwsnew*ysfktr*ksigyvirwlcrcnrf
snyfklwfryhwskl*n*igftr*yyitk*sikcyw*k*sisyggingsfl*nfktisc-
--

---NQFRYIEPAVLSLADGTSVKMPGGVHTQVLHDMVDEYVTVSENEIASTIVHLLYNSR
TVSEGAGCLGLAALMHKKIKVRKDERVCVIICGGNIDMSTLRQVYEYGLRSLGRSFTIHL
TTWDYPGTLSKIIGLAARAELKVREIRHIRGGGNINWNEVIISLSFYSNSFNHQNFFLSL
LAQEGLFPKIVGRKYIKDNEIVYKIFDKSVDKKNKELKDTFSERQQLFLEQYGKQANVSL
ESKMN*kif*innkkknnnnniqikl*nkiqtyifkeinkinktyiyillsllll

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15915-1 (Contig-U15915-1Q)
/CSM_Contig/Contig-U15915-1Q.Seq.d
(2688 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15915-1 (Contig-U15915-1Q) /CSM_Contig/Conti... 4546 0.0
Contig-U15977-1 (Contig-U15977-1Q) /CSM_Contig/Conti... 50 2e-05
Contig-U15985-1 (Contig-U15985-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U13284-1 (Contig-U13284-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U09266-1 (Contig-U09266-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U15999-1 (Contig-U15999-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U15299-1 (Contig-U15299-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U04619-1 (Contig-U04619-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U00472-1 (Contig-U00472-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U15662-1 (Contig-U15662-1Q) /CSM_Contig/Conti... 40 0.017

>Contig-U15915-1 (Contig-U15915-1Q) /CSM_Contig/Contig-U15915-1Q.Seq.d
Length = 2688

Score = 4546 bits (2293), Expect = 0.0
Identities = 2323/2323 (100%)
Strand = Plus / Plus


Query: 206 ccaatagtaataataatataaatacaagtaatacaaatattttaaatggtagtgttaata 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ccaatagtaataataatataaatacaagtaatacaaatattttaaatggtagtgttaata 265


Query: 266 gtttaaataatagtagtacaaatttatttacaacacatcaaaataatccagtaaagaatt 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtttaaataatagtagtacaaatttatttacaacacatcaaaataatccagtaaagaatt 325


Query: 326 taaaaggatttgatgatattggtgaaggtatacttagattcgaaggatcaaaagaaattg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taaaaggatttgatgatattggtgaaggtatacttagattcgaaggatcaaaagaaattg 385


Query: 386 atttcattggatcagtaaagagagttcattcaatgatgaaagattatttaaagaaaactc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atttcattggatcagtaaagagagttcattcaatgatgaaagattatttaaagaaaactc 445


Query: 446 cacaatatgattacgaattattaagtcaattattcaaatgtgatttacaattgaaattag 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cacaatatgattacgaattattaagtcaattattcaaatgtgatttacaattgaaattag 505


Query: 506 agaatcttcaattgtttggtgatatttatgttagaaattgttttagtatccttttatcaa 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agaatcttcaattgtttggtgatatttatgttagaaattgttttagtatccttttatcaa 565


Query: 566 attattttaatcaagccaaagatttaggtaaagagtttagacaaattggtggtttcgttt 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 attattttaatcaagccaaagatttaggtaaagagtttagacaaattggtggtttcgttt 625


Query: 626 tagtgattaatccaatggatattgaaagtcaaccaatggtaactggtagtattttaactg 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tagtgattaatccaatggatattgaaagtcaaccaatggtaactggtagtattttaactg 685


Query: 686 ctcttcatttaaaaatgaaatgtattatttatgttggtcctggtaatttaccattatcac 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ctcttcatttaaaaatgaaatgtattatttatgttggtcctggtaatttaccattatcac 745


Query: 746 aaattacaagattatatatgtgtcatgctagaggtgcaaaaattatatttcataaaggtg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aaattacaagattatatatgtgtcatgctagaggtgcaaaaattatatttcataaaggtg 805


Query: 806 atgtatcatcatgttatacaagagcatggcaacatgcaaaagatatgagtatggtatttt 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 atgtatcatcatgttatacaagagcatggcaacatgcaaaagatatgagtatggtatttt 865


Query: 866 tagattgtaaatttataccacattttagtttattgggtgcagcaactattgcacatgaaa 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tagattgtaaatttataccacattttagtttattgggtgcagcaactattgcacatgaaa 925


Query: 926 tgatggaggatagtccagatagggagacaattatcataccattaagattatattcacagg 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 tgatggaggatagtccagatagggagacaattatcataccattaagattatattcacagg 985


Query: 986 gttggagttatgtcagtggtatttcaattttctataagattatgaaacctgaaatcaaga 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gttggagttatgtcagtggtatttcaattttctataagattatgaaacctgaaatcaaga 1045


Query: 1046 ttatagtagttcaaatgactgatgatctctttggtaaagatattgaaggtaaagaattta 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 ttatagtagttcaaatgactgatgatctctttggtaaagatattgaaggtaaagaattta 1105


Query: 1106 atagacaatcattattccctgaccgtttagagattggttggttagcattaattcatgatc 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 atagacaatcattattccctgaccgtttagagattggttggttagcattaattcatgatc 1165


Query: 1166 aatcagatcttaccaatgttttcgacgctttcgattcaagaaatcaaggtaaattctctg 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 aatcagatcttaccaatgttttcgacgctttcgattcaagaaatcaaggtaaattctctg 1225


Query: 1226 ataaagatttagaggcattattgataagcattggtggtgatccaactagaaataaatcaa 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 ataaagatttagaggcattattgataagcattggtggtgatccaactagaaataaatcaa 1285


Query: 1286 tgtgtccaaaatcatcactttctcaaactgaatttgttcatgaagtaatcacagagatca 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 tgtgtccaaaatcatcactttctcaaactgaatttgttcatgaagtaatcacagagatca 1345


Query: 1346 caaatggtttagagcaattggaggagaaatttagctactttttaccacaattcaaattgg 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 caaatggtttagagcaattggaggagaaatttagctactttttaccacaattcaaattgg 1405


Query: 1406 ataacttaatcaatcataaaatcatcgatcaattagtaacagcaaccgaggatcaagctt 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 ataacttaatcaatcataaaatcatcgatcaattagtaacagcaaccgaggatcaagctt 1465


Query: 1466 caatcgctttcattaaatgtttagagtatacccatactctcaccaatggtaagggttcaa 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 caatcgctttcattaaatgtttagagtatacccatactctcaccaatggtaagggttcaa 1525


Query: 1526 ttgctttgggtggtctaatgagtggtaatattcatttaagacccgatgaaaaagtattgg 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 ttgctttgggtggtctaatgagtggtaatattcatttaagacccgatgaaaaagtattgg 1585


Query: 1586 ttatgttatcaggtggttatgtcgatgtaatcgattttcaaactattttaaactatggtt 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 ttatgttatcaggtggttatgtcgatgtaatcgattttcaaactattttaaactatggtt 1645


Query: 1646 tagatatcactggtcaaagctttgaaattgaattggatttacccgataatactacatcac 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 tagatatcactggtcaaagctttgaaattgaattggatttacccgataatactacatcac 1705


Query: 1706 taaataaagtattaaatgttattggtgaaaataaagtatcagttatggaggtattaatgg 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 taaataaagtattaaatgttattggtgaaaataaagtatcagttatggaggtattaatgg 1765


Query: 1766 atcgttcttgtgaaactttaaaacaatatcatgtnnnnnnnnnnccaatcaattccgtta 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 atcgttcttgtgaaactttaaaacaatatcatgtnnnnnnnnnnccaatcaattccgtta 1825


Query: 1826 tatcgaaccagcagttttatcattggccgatggtacaagtgtaaagatgccaggtggtgt 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 tatcgaaccagcagttttatcattggccgatggtacaagtgtaaagatgccaggtggtgt 1885


Query: 1886 acacactcaagtacttcatgatatggtcgatgagtatgtaaccgttagtgaaaatgaaat 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 acacactcaagtacttcatgatatggtcgatgagtatgtaaccgttagtgaaaatgaaat 1945


Query: 1946 cgcttcgaccatagttcatctactttataatagtcgtacagtttcagagggtgcaggttg 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 cgcttcgaccatagttcatctactttataatagtcgtacagtttcagagggtgcaggttg 2005


Query: 2006 tttaggtttggctgcattaatgcataagaaaattaaagttagaaaggatgaaagggtttg 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 tttaggtttggctgcattaatgcataagaaaattaaagttagaaaggatgaaagggtttg 2065


Query: 2066 tgtcatcatttgtggtggtaatatcgatatgtcaacacttcgtcaagtctatgaatatgg 2125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 tgtcatcatttgtggtggtaatatcgatatgtcaacacttcgtcaagtctatgaatatgg 2125


Query: 2126 tttacgttcacttggtcgttctttcacaattcatttaacaacttgggattatcctgggac 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 tttacgttcacttggtcgttctttcacaattcatttaacaacttgggattatcctgggac 2185


Query: 2186 cctaagtaaaatcattggtttggctgcccgtgccgaattaaaagttcgtgaaattagaca 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 cctaagtaaaatcattggtttggctgcccgtgccgaattaaaagttcgtgaaattagaca 2245


Query: 2246 tatccgtggtggtggtaatatcaattggaatgaagttatcatttccctctccttctatag 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 tatccgtggtggtggtaatatcaattggaatgaagttatcatttccctctccttctatag 2305


Query: 2306 taactcttttaatcatcaaaactttttcttatctctattggctcaagaaggtctcttccc 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 taactcttttaatcatcaaaactttttcttatctctattggctcaagaaggtctcttccc 2365


Query: 2366 aaagattgtcggtagaaaatacattaaagataatgaaatagtctataaaattttcgataa 2425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 aaagattgtcggtagaaaatacattaaagataatgaaatagtctataaaattttcgataa 2425


Query: 2426 atctgttgataaaaagaataaagaattaaaagataccttttcagaaagacaacaactatt 2485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 atctgttgataaaaagaataaagaattaaaagataccttttcagaaagacaacaactatt 2485


Query: 2486 tttagaacaatatggaaaacaagccaatgtttctttggaaagt 2528
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 tttagaacaatatggaaaacaagccaatgtttctttggaaagt 2528


Score = 105 bits (53), Expect = 4e-22
Identities = 53/53 (100%)
Strand = Plus / Plus


Query: 56 ggcaaagaaacattcaagagaagaaacaataacatcaccaagtccaagtggaa 108
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 ggcaaagaaacattcaagagaagaaacaataacatcaccaagtccaagtggaa 108


>Contig-U15977-1 (Contig-U15977-1Q) /CSM_Contig/Contig-U15977-1Q.Seq.d
Length = 1200

Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus


Query: 208 aatagtaataataatataaatacaagtaatacaaata 244
|||| ||||||||||| |||||||| |||||||||||
Sbjct: 748 aataataataataatacaaatacaaataatacaaata 784


>Contig-U15985-1 (Contig-U15985-1Q) /CSM_Contig/Contig-U15985-1Q.Seq.d
Length = 790

Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 213 taataataatataaatacaagtaata 238
|||||||||||||||||||| |||||
Sbjct: 414 taataataatataaatacaaataata 439


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 59,368
Number of Sequences: 8402
Number of extensions: 59368
Number of successful extensions: 6935
Number of sequences better than 10.0: 538
length of query: 2688
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2671
effective length of database: 7,932,708
effective search space: 21188263068
effective search space used: 21188263068
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2.28
Homology vs DNA
Query= Contig-U15915-1 (Contig-U15915-1Q) /CSM_Contig/Contig-U15915-1Q.Seq.d
(2688 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 2068 0.0 1
(BJ444674) Dictyostelium discoideum cDNA clone:ddv57j02, 3' ... 1364 0.0 2
(BJ445984) Dictyostelium discoideum cDNA clone:ddv61c12, 3' ... 1227 0.0 1
(BJ396899) Dictyostelium discoideum cDNA clone:dds44i10, 5' ... 1172 0.0 1
(BJ366665) Dictyostelium discoideum cDNA clone:ddc39f22, 5' ... 1168 0.0 1
(BJ426091) Dictyostelium discoideum cDNA clone:ddv57j02, 5' ... 1070 0.0 1
(BJ408942) Dictyostelium discoideum cDNA clone:dds47a13, 3' ... 1043 0.0 1
(BJ420808) Dictyostelium discoideum cDNA clone:ddv40b17, 5' ... 977 0.0 1
(BJ380939) Dictyostelium discoideum cDNA clone:ddc39f22, 3' ... 795 0.0 1
(BJ397759) Dictyostelium discoideum cDNA clone:dds47a13, 5' ... 704 0.0 2
(BJ408000) Dictyostelium discoideum cDNA clone:dds44i10, 3' ... 741 0.0 1
(BJ427098) Dictyostelium discoideum cDNA clone:ddv61c12, 5' ... 517 e-166 2
(BJ439451) Dictyostelium discoideum cDNA clone:ddv40b17, 3' ... 291 7e-74 1
(EC760318) PSE00000677 rw_mgpallid Polysphondylium pallidum ... 70 8e-17 3
(AC183136) Bos taurus clone CH240-103E4, WORKING DRAFT SEQUE... 50 0.44 1
(CU458240) Arabidopsis thaliana T-DNA flanking sequence GK-9... 38 0.46 2
(AC222967) Bos taurus clone CH240-433G11, WORKING DRAFT SEQU... 36 0.91 2
(AC154898) Bos taurus clone CH240-3N6, WORKING DRAFT SEQUENC... 36 0.92 2
(AC094358) Rattus norvegicus clone CH230-3C15, *** SEQUENCIN... 40 1.2 12
(FP085592) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.7 1
(AC181569) Strongylocentrotus purpuratus clone R3-8F9, WORKI... 48 1.7 1
(FI180614) MUGQ_CH252P135A13T7_CN122_063 CHORI-252 Vervet Mo... 48 1.7 1
(ET665790) MUGQ_CH252P455I23T7_CH0111_088 CHORI-252 Vervet M... 48 1.7 1
(EK259152) 1095462086716 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.7 1
(EJ947390) 1093018921222 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.7 1
(EJ888166) 1093018428741 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.7 1
(EJ858508) 1093017959218 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.7 1
(EJ668384) 1092955049534 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.7 1
(AG250751) Lotus japonicus DNA, clone:LjT28a15_sfi. 48 1.7 1
(CU431183) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 48 1.7 1
(CP000117) Anabaena variabilis ATCC 29413, complete genome. 48 1.7 1
(BA000019) Nostoc sp. PCC 7120 DNA, complete genome. 48 1.7 1
(BZ431891) BONDF86TF BO_1.6_2_KB_tot Brassica oleracea genom... 36 3.4 2
(BH961718) odd50f10.g1 B.oleracea002 Brassica oleracea genom... 36 3.4 2
(ER414439) 1095390089004 Global-Ocean-Sampling_GS-34-01-01-1... 44 3.8 2
(EK376568) 1095469443198 Global-Ocean-Sampling_GS-31-01-01-1... 42 4.2 2
(AM481566) Vitis vinifera contig VV78X196935.5, whole genome... 34 6.0 6
(CR932365) Zebrafish DNA sequence from clone CH211-157M7 in ... 46 6.9 1
(BX640507) Zebrafish DNA sequence from clone DKEY-97O1 in li... 46 6.9 1
(BX005400) Zebrafish DNA sequence from clone CH211-203C7. 46 6.9 1
(BX072557) Mouse DNA sequence from clone RP23-79L4 on chromo... 46 6.9 1
(AC163652) Mus musculus BAC clone RP24-315D17 from chromosom... 46 6.9 1
(AC155915) Mus musculus 6 BAC RP24-462N21 (Roswell Park Canc... 46 6.9 1
(AC153817) Mus musculus BAC RP23-11P24 (Roswell Park Cancer... 46 6.9 1
(AC127303) Mus musculus BAC clone RP23-280E20 from chromosom... 46 6.9 1
(AC122818) Mus musculus BAC clone RP23-243O16 from 17, compl... 46 6.9 1
(CU019602) M.truncatula DNA sequence from clone MTH2-12C24 o... 46 6.9 1
(CR955010) Medicago truncatula chromosome 5 clone mth2-8n12,... 46 6.9 1
(AP008217) Oryza sativa (japonica cultivar-group) genomic DN... 46 6.9 1
(AC135569) Oryza sativa Japonica Group chromosome 11 clone O... 46 6.9 1
(EA697122) Sequence 76001 from patent US 7365185. 46 6.9 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 6.9 1
(AC137183) Rattus norvegicus clone CH230-unknown, WORKING DR... 46 6.9 1
(AC132061) Rattus norvegicus clone CH230-32E18, *** SEQUENCI... 46 6.9 1
(AC125693) Rattus norvegicus clone CH230-137N5, WORKING DRAF... 46 6.9 1
(AC122082) Rattus norvegicus clone CH230-362I9, WORKING DRAF... 46 6.9 1
(AC121381) Rattus norvegicus clone CH230-82O20, WORKING DRAF... 46 6.9 1
(AC115314) Rattus norvegicus clone CH230-98F1, *** SEQUENCIN... 46 6.9 1
(AC114250) Rattus norvegicus clone CH230-343H5, WORKING DRAF... 46 6.9 1
(AC112879) Rattus norvegicus clone CH230-50J10, *** SEQUENCI... 46 6.9 1
(AC112617) Rattus norvegicus clone CH230-254D14, *** SEQUENC... 46 6.9 1
(AC111684) Rattus norvegicus clone CH230-55E6, *** SEQUENCIN... 46 6.9 1
(AC099295) Rattus norvegicus clone CH230-40I15, WORKING DRAF... 46 6.9 1
(AC095550) Rattus norvegicus clone CH230-8B17, WORKING DRAFT... 46 6.9 1
(CU915362) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.9 1
(CU914155) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 6.9 1
(AC093970) Rattus norvegicus clone CH230-5K17, *** SEQUENCIN... 46 6.9 1
(AC079024) Mus musculus strain C57BL6/J chromosome 6 clone R... 46 6.9 1
(AC078932) Mus musculus strain C57BL6/J chromosome 6 clone R... 46 6.9 1
(CU074285) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.9 1
(CT827849) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.9 1
(AC224189) Bos taurus clone CH240-447I3, WORKING DRAFT SEQUE... 46 6.9 1
(AC205237) Spermophilus tridecemlineatus clone VMRC20-346N10... 46 6.9 1
(DH692169) Rattus norvegicus DNA, BAC clone: RNB1-249E21, 3'... 46 6.9 1
(CZ208424) AIAA-aag42k21.g1 Ancylostoma caninum whole genome... 46 6.9 1
(CG935028) MBEDH12TFC mth2 Medicago truncatula genomic clone... 46 6.9 1
(CE835309) tigr-gss-dog-17000332391331 Dog Library Canis lup... 46 6.9 1
(BX242876) Danio rerio genomic clone DKEY-230L16, genomic su... 46 6.9 1
(BX218584) Danio rerio genomic clone DKEY-50P7, genomic surv... 46 6.9 1
(BX199329) Danio rerio genomic clone DKEY-209H15, genomic su... 46 6.9 1
(GE572516) CCHT6258.b1_D05.ab1 CCHT Niger Seed Guizotia abys... 46 6.9 1
(AW359348) 45883 MARC 2PIG Sus scrofa cDNA 5', mRNA sequence. 46 6.9 1
(BX537276) Zebrafish DNA sequence from clone DKEYP-57A10 in ... 34 7.2 9
(BX908782) Zebrafish DNA sequence from clone DKEY-6E4 in lin... 38 8.4 8
(AC204905) Macaca mulatta BAC CH250-95J4 () complete sequence. 36 8.8 8

>(AC116977) Dictyostelium discoideum chromosome 2 map 5515173-5817331
strain AX4, complete sequence.
Length = 302156

Score = 2068 bits (1043), Expect = 0.0
Identities = 1043/1043 (100%)
Strand = Plus / Plus


Query: 757 ttatatatgtgtcatgctagaggtgcaaaaattatatttcataaaggtgatgtatcatca 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186203 ttatatatgtgtcatgctagaggtgcaaaaattatatttcataaaggtgatgtatcatca 186262


Query: 817 tgttatacaagagcatggcaacatgcaaaagatatgagtatggtatttttagattgtaaa 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186263 tgttatacaagagcatggcaacatgcaaaagatatgagtatggtatttttagattgtaaa 186322


Query: 877 tttataccacattttagtttattgggtgcagcaactattgcacatgaaatgatggaggat 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186323 tttataccacattttagtttattgggtgcagcaactattgcacatgaaatgatggaggat 186382


Query: 937 agtccagatagggagacaattatcataccattaagattatattcacagggttggagttat 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186383 agtccagatagggagacaattatcataccattaagattatattcacagggttggagttat 186442


Query: 997 gtcagtggtatttcaattttctataagattatgaaacctgaaatcaagattatagtagtt 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186443 gtcagtggtatttcaattttctataagattatgaaacctgaaatcaagattatagtagtt 186502


Query: 1057 caaatgactgatgatctctttggtaaagatattgaaggtaaagaatttaatagacaatca 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186503 caaatgactgatgatctctttggtaaagatattgaaggtaaagaatttaatagacaatca 186562


Query: 1117 ttattccctgaccgtttagagattggttggttagcattaattcatgatcaatcagatctt 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186563 ttattccctgaccgtttagagattggttggttagcattaattcatgatcaatcagatctt 186622


Query: 1177 accaatgttttcgacgctttcgattcaagaaatcaaggtaaattctctgataaagattta 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186623 accaatgttttcgacgctttcgattcaagaaatcaaggtaaattctctgataaagattta 186682


Query: 1237 gaggcattattgataagcattggtggtgatccaactagaaataaatcaatgtgtccaaaa 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186683 gaggcattattgataagcattggtggtgatccaactagaaataaatcaatgtgtccaaaa 186742


Query: 1297 tcatcactttctcaaactgaatttgttcatgaagtaatcacagagatcacaaatggttta 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186743 tcatcactttctcaaactgaatttgttcatgaagtaatcacagagatcacaaatggttta 186802


Query: 1357 gagcaattggaggagaaatttagctactttttaccacaattcaaattggataacttaatc 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186803 gagcaattggaggagaaatttagctactttttaccacaattcaaattggataacttaatc 186862


Query: 1417 aatcataaaatcatcgatcaattagtaacagcaaccgaggatcaagcttcaatcgctttc 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186863 aatcataaaatcatcgatcaattagtaacagcaaccgaggatcaagcttcaatcgctttc 186922


Query: 1477 attaaatgtttagagtatacccatactctcaccaatggtaagggttcaattgctttgggt 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186923 attaaatgtttagagtatacccatactctcaccaatggtaagggttcaattgctttgggt 186982


Query: 1537 ggtctaatgagtggtaatattcatttaagacccgatgaaaaagtattggttatgttatca 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186983 ggtctaatgagtggtaatattcatttaagacccgatgaaaaagtattggttatgttatca 187042


Query: 1597 ggtggttatgtcgatgtaatcgattttcaaactattttaaactatggtttagatatcact 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187043 ggtggttatgtcgatgtaatcgattttcaaactattttaaactatggtttagatatcact 187102


Query: 1657 ggtcaaagctttgaaattgaattggatttacccgataatactacatcactaaataaagta 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187103 ggtcaaagctttgaaattgaattggatttacccgataatactacatcactaaataaagta 187162


Query: 1717 ttaaatgttattggtgaaaataaagtatcagttatggaggtattaatggatcgttcttgt 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187163 ttaaatgttattggtgaaaataaagtatcagttatggaggtattaatggatcgttcttgt 187222


Query: 1777 gaaactttaaaacaatatcatgt 1799
|||||||||||||||||||||||
Sbjct: 187223 gaaactttaaaacaatatcatgt 187245

Score = 1407 bits (710), Expect = 0.0
Identities = 713/714 (99%)
Strand = Plus / Plus


Query: 1810 ccaatcaattccgttatatcgaaccagcagttttatcattggccgatggtacaagtgtaa 1869
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 188292 ccaatcaattccgttatatcgaaccagcagttttatcattggccgatggtacaaatgtaa 188351


Query: 1870 agatgccaggtggtgtacacactcaagtacttcatgatatggtcgatgagtatgtaaccg 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188352 agatgccaggtggtgtacacactcaagtacttcatgatatggtcgatgagtatgtaaccg 188411


Query: 1930 ttagtgaaaatgaaatcgcttcgaccatagttcatctactttataatagtcgtacagttt 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188412 ttagtgaaaatgaaatcgcttcgaccatagttcatctactttataatagtcgtacagttt 188471


Query: 1990 cagagggtgcaggttgtttaggtttggctgcattaatgcataagaaaattaaagttagaa 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188472 cagagggtgcaggttgtttaggtttggctgcattaatgcataagaaaattaaagttagaa 188531


Query: 2050 aggatgaaagggtttgtgtcatcatttgtggtggtaatatcgatatgtcaacacttcgtc 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188532 aggatgaaagggtttgtgtcatcatttgtggtggtaatatcgatatgtcaacacttcgtc 188591


Query: 2110 aagtctatgaatatggtttacgttcacttggtcgttctttcacaattcatttaacaactt 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188592 aagtctatgaatatggtttacgttcacttggtcgttctttcacaattcatttaacaactt 188651


Query: 2170 gggattatcctgggaccctaagtaaaatcattggtttggctgcccgtgccgaattaaaag 2229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188652 gggattatcctgggaccctaagtaaaatcattggtttggctgcccgtgccgaattaaaag 188711


Query: 2230 ttcgtgaaattagacatatccgtggtggtggtaatatcaattggaatgaagttatcattt 2289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188712 ttcgtgaaattagacatatccgtggtggtggtaatatcaattggaatgaagttatcattt 188771


Query: 2290 ccctctccttctatagtaactcttttaatcatcaaaactttttcttatctctattggctc 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188772 ccctctccttctatagtaactcttttaatcatcaaaactttttcttatctctattggctc 188831


Query: 2350 aagaaggtctcttcccaaagattgtcggtagaaaatacattaaagataatgaaatagtct 2409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188832 aagaaggtctcttcccaaagattgtcggtagaaaatacattaaagataatgaaatagtct 188891


Query: 2410 ataaaattttcgataaatctgttgataaaaagaataaagaattaaaagataccttttcag 2469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188892 ataaaattttcgataaatctgttgataaaaagaataaagaattaaaagataccttttcag 188951


Query: 2470 aaagacaacaactatttttagaacaatatggaaaacaagccaatgtttctttgg 2523
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188952 aaagacaacaactatttttagaacaatatggaaaacaagccaatgtttctttgg 189005

Score = 946 bits (477), Expect(7) = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus


Query: 280 agtacaaatttatttacaacacatcaaaataatccagtaaagaatttaaaaggatttgat 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185625 agtacaaatttatttacaacacatcaaaataatccagtaaagaatttaaaaggatttgat 185684


Query: 340 gatattggtgaaggtatacttagattcgaaggatcaaaagaaattgatttcattggatca 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185685 gatattggtgaaggtatacttagattcgaaggatcaaaagaaattgatttcattggatca 185744


Query: 400 gtaaagagagttcattcaatgatgaaagattatttaaagaaaactccacaatatgattac 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185745 gtaaagagagttcattcaatgatgaaagattatttaaagaaaactccacaatatgattac 185804


Query: 460 gaattattaagtcaattattcaaatgtgatttacaattgaaattagagaatcttcaattg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185805 gaattattaagtcaattattcaaatgtgatttacaattgaaattagagaatcttcaattg 185864


Query: 520 tttggtgatatttatgttagaaattgttttagtatccttttatcaaattattttaatcaa 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185865 tttggtgatatttatgttagaaattgttttagtatccttttatcaaattattttaatcaa 185924


Query: 580 gccaaagatttaggtaaagagtttagacaaattggtggtttcgttttagtgattaatcca 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185925 gccaaagatttaggtaaagagtttagacaaattggtggtttcgttttagtgattaatcca 185984


Query: 640 atggatattgaaagtcaaccaatggtaactggtagtattttaactgctcttcatttaaaa 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185985 atggatattgaaagtcaaccaatggtaactggtagtattttaactgctcttcatttaaaa 186044


Query: 700 atgaaatgtattatttatgttggtcctggtaatttaccattatcacaaattacaaga 756
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186045 atgaaatgtattatttatgttggtcctggtaatttaccattatcacaaattacaaga 186101

Score = 101 bits (51), Expect(7) = 0.0
Identities = 51/51 (100%)
Strand = Plus / Plus


Query: 60 aagaaacattcaagagaagaaacaataacatcaccaagtccaagtggaaat 110
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185406 aagaaacattcaagagaagaaacaataacatcaccaagtccaagtggaaat 185456

Score = 28.2 bits (14), Expect(7) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1080 taaagatattgaag 1093
||||||||||||||
Sbjct: 255669 taaagatattgaag 255682

Score = 28.2 bits (14), Expect(7) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1551 taatattcatttaa 1564
||||||||||||||
Sbjct: 275219 taatattcatttaa 275232

Score = 28.2 bits (14), Expect(7) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2434 ataaaaagaataaa 2447
||||||||||||||
Sbjct: 288498 ataaaaagaataaa 288511

Score = 26.3 bits (13), Expect(7) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 1050 agtagttcaaatg 1062
|||||||||||||
Sbjct: 187484 agtagttcaaatg 187496

Score = 26.3 bits (13), Expect(7) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 1638 ctatggtttagat 1650
|||||||||||||
Sbjct: 287079 ctatggtttagat 287091

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,833,161,533
Number of extensions: 165722620
Number of successful extensions: 13332473
Number of sequences better than 10.0: 85
Length of query: 2688
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2663
Effective length of database: 96,311,147,814
Effective search space: 256476586628682
Effective search space used: 256476586628682
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U15915-1 (Contig-U15915-1Q) /CSM_Contig/Contig-U15915-1Q.Seq.d
(2688 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116977_71(AC116977|pid:none) Dictyostelium discoideum chromoso... 1005 0.0
AY132351_1(AY132351|pid:none) Giardia intestinalis threonine deh... 144 2e-32
CR555306_1956(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 124 1e-26
AY596297_2226(AY596297|pid:none) Haloarcula marismortui ATCC 430... 109 5e-22
CP001341_1225(CP001341|pid:none) Arthrobacter chlorophenolicus A... 109 6e-22
AP009389_102(AP009389|pid:none) Pelotomaculum thermopropionicum ... 108 1e-21
CP000474_1233(CP000474|pid:none) Arthrobacter aurescens TC1, com... 108 1e-21
CP000454_1158(CP000454|pid:none) Arthrobacter sp. FB24, complete... 107 2e-21
CP000141_191(CP000141|pid:none) Carboxydothermus hydrogenoforman... 106 5e-21
CP001131_3499(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 105 7e-21
AM180088_354(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 105 9e-21
CP000251_3437(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 105 1e-20
CP001337_43(CP001337|pid:none) Chloroflexus aggregans DSM 9485, ... 104 2e-20
CP000910_3013(CP000910|pid:none) Renibacterium salmoninarum ATCC... 103 3e-20
CP000769_3517(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 103 4e-20
AP008230_4244(AP008230|pid:none) Desulfitobacterium hafniense Y5... 102 6e-20
AP009152_1772(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 102 7e-20
CP001336_1069(CP001336|pid:none) Desulfitobacterium hafniense DC... 102 7e-20
CP001089_469(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 101 1e-19
CP001472_1334(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 101 2e-19
CR936257_537(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 101 2e-19
AM774415_1664(AM774415|pid:none) Halobacterium salinarum complet... 100 2e-19
CP000767_830(CP000767|pid:none) Campylobacter curvus 525.92, com... 100 3e-19
CP000930_1199(CP000930|pid:none) Heliobacterium modesticaldum Ic... 100 3e-19
CP000875_948(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 100 5e-19
AE017180_484(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 99 6e-19
CP001098_924(CP001098|pid:none) Halothermothrix orenii H 168, co... 99 6e-19
BA000043_1591(BA000043|pid:none) Geobacillus kaustophilus HTA426... 99 8e-19
CP000478_730(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 99 1e-18
CP000142_3167(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 98 1e-18
AP009178_808(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 98 2e-18
EU016627_16(EU016627|pid:none) Uncultured Group I marine crenarc... 98 2e-18
CP000768_982(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 97 2e-18
CP000493_207(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 97 4e-18
AJ544863_3(AJ544863|pid:none) Thermotoga sp. RQ2 ORF19 (partial)... 96 5e-18
CP000361_1962(CP000361|pid:none) Arcobacter butzleri RM4018, com... 96 5e-18
CP000141_2381(CP000141|pid:none) Carboxydothermus hydrogenoforma... 96 9e-18
CP001638_1648(CP001638|pid:none) Geobacillus sp. WCH70, complete... 95 1e-17
CP000077_662(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 95 1e-17
CP001390_689(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 95 2e-17
CP000698_3961(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 95 2e-17
CP000585_272(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 94 3e-17
AE017125_896(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 93 6e-17
BX251412_123(BX251412|pid:none) Tropheryma whipplei TW08/27, com... 92 1e-16
CP000667_914(CP000667|pid:none) Salinispora tropica CNB-440, com... 92 1e-16
CP001124_3648(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 92 1e-16
BX842648_293(BX842648|pid:none) Bdellovibrio bacteriovorus compl... 91 2e-16
CP000512_136(CP000512|pid:none) Acidovorax citrulli AAC00-1, com... 91 2e-16
CP000575_518(CP000575|pid:none) Staphylothermus marinus F1, comp... 91 3e-16
CP000555_3761(CP000555|pid:none) Methylibium petroleiphilum PM1,... 90 4e-16
CP000885_2411(CP000885|pid:none) Clostridium phytofermentans ISD... 90 4e-16
AM180355_2586(AM180355|pid:none) Clostridium difficile 630 compl... 90 5e-16
CP000139_3765(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 90 5e-16
CP000148_3036(CP000148|pid:none) Geobacter metallireducens GS-15... 89 8e-16
AM902716_1620(AM902716|pid:none) Bordetella petrii strain DSM 12... 89 1e-15
AY132362_1(AY132362|pid:none) Spironucleus barkhanus threonine d... 89 1e-15
CP000721_1546(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 88 1e-15
CP000487_708(CP000487|pid:none) Campylobacter fetus subsp. fetus... 87 2e-15
CP000850_847(CP000850|pid:none) Salinispora arenicola CNS-205, c... 87 2e-15
CP000724_3289(CP000724|pid:none) Alkaliphilus metalliredigens QY... 87 4e-15
CP000529_109(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 86 5e-15
AP011115_5907(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 86 5e-15
AE015927_2359(AE015927|pid:none) Clostridium tetani E88, complet... 86 5e-15
CP000561_1637(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 86 7e-15
CP000481_1884(CP000481|pid:none) Acidothermus cellulolyticus 11B... 86 9e-15
CP000968_514(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 85 1e-14
CP001104_1011(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 85 2e-14
CP001095_2370(CP001095|pid:none) Bifidobacterium longum subsp. i... 85 2e-14
CP000852_923(CP000852|pid:none) Caldivirga maquilingensis IC-167... 85 2e-14
CP000605_1497(CP000605|pid:none) Bifidobacterium longum DJO10A, ... 85 2e-14
BX640448_278(BX640448|pid:none) Bordetella bronchiseptica strain... 84 2e-14
AM180088_793(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 84 2e-14
BA000002_987(BA000002|pid:none) Aeropyrum pernix K1 DNA, complet... 84 3e-14
C72630(C72630)probable threonine dehydratase APE1498 - Aeropyrum... 84 3e-14
BA000030_3308(BA000030|pid:none) Streptomyces avermitilis MA-468... 84 4e-14
CP000962_3509(CP000962|pid:none) Clostridium botulinum A3 str. L... 84 4e-14
CP000939_3518(CP000939|pid:none) Clostridium botulinum B1 str. O... 83 5e-14
CP000726_3411(CP000726|pid:none) Clostridium botulinum A str. AT... 83 5e-14
AM412317_3510(AM412317|pid:none) Clostridium botulinum A str. AT... 83 5e-14
CP000728_3488(CP000728|pid:none) Clostridium botulinum F str. La... 83 5e-14
CP000943_6493(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 83 6e-14
CP000884_115(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 82 8e-14
CP000248_1096(CP000248|pid:none) Novosphingobium aromaticivorans... 82 8e-14
CP000660_1470(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 82 8e-14
CU234118_3366(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 82 1e-13
CU468230_624(CU468230|pid:none) Acinetobacter baumannii str. SDF... 82 1e-13
AL445063_111(AL445063|pid:none) Thermoplasma acidophilum complet... 82 1e-13
CP000699_2380(CP000699|pid:none) Sphingomonas wittichii RW1, com... 81 2e-13
AP009493_2568(AP009493|pid:none) Streptomyces griseus subsp. gri... 80 3e-13
AE014297_938(AE014297|pid:none) Drosophila melanogaster chromoso... 80 3e-13
CP001146_1316(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 80 3e-13
AP008957_4264(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 80 4e-13
AC024805_6(AC024805|pid:none) Caenorhabditis elegans cosmid Y51H... 79 7e-13
CP001349_7258(CP001349|pid:none) Methylobacterium nodulans ORS 2... 79 7e-13
AE009951_1984(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 79 9e-13
CP000157_326(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 79 9e-13
CP001618_1069(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 78 1e-12
CP001032_957(CP001032|pid:none) Opitutus terrae PB90-1, complete... 78 2e-12
BA000011_190(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 77 3e-12
CP000613_3098(CP000613|pid:none) Rhodospirillum centenum SW, com... 77 4e-12
CP000382_1174(CP000382|pid:none) Clostridium novyi NT, complete ... 76 6e-12
AP009256_1570(AP009256|pid:none) Bifidobacterium adolescentis AT... 75 1e-11
CP000312_1152(CP000312|pid:none) Clostridium perfringens SM101, ... 75 1e-11
CP000494_3748(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 74 2e-11
CP000159_2233(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 74 3e-11
CP000227_2286(CP000227|pid:none) Bacillus cereus Q1, complete ge... 73 6e-11
CP001407_2370(CP001407|pid:none) Bacillus cereus 03BB102, comple... 73 6e-11
CP001177_2394(CP001177|pid:none) Bacillus cereus AH187, complete... 73 6e-11
CP000115_2240(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 72 8e-11
CU928158_2951(CU928158|pid:none) Escherichia fergusonii ATCC 354... 72 8e-11
AE017194_2483(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 72 1e-10
CP000246_1339(CP000246|pid:none) Clostridium perfringens ATCC 13... 72 1e-10
CP000860_65(CP000860|pid:none) Candidatus Desulforudis audaxviat... 72 1e-10
(Q2FH01) RecName: Full=Threonine dehydratase catabolic; ... 72 1e-10
GN098530_1(GN098530|pid:none) Sequence 3311 from Patent WO200903... 72 1e-10
CP000319_2541(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 72 1e-10
CP001138_3196(CP001138|pid:none) Salmonella enterica subsp. ente... 71 2e-10
CP000026_2905(CP000026|pid:none) Salmonella enterica subsp. ente... 71 2e-10
AE017220_3190(AE017220|pid:none) Salmonella enterica subsp. ente... 71 2e-10
AM933172_3071(AM933172|pid:none) Salmonella enterica subsp. ente... 71 2e-10
AB0897(AB0897) threonine ammonia-lyase (EC 4.3.1.19) [similarity... 71 2e-10
(P0AGF6) RecName: Full=Threonine dehydratase catabolic; ... 71 2e-10
CP000038_3053(CP000038|pid:none) Shigella sonnei Ss046, complete... 71 2e-10
CP001365_288(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 71 2e-10
CP000822_4393(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 71 2e-10
(Q2YY67) RecName: Full=Threonine dehydratase catabolic; ... 71 2e-10
AE016877_2253(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 71 2e-10
(Q7A5L8) RecName: Full=Threonine dehydratase catabolic; ... 70 3e-10
CP000356_1828(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 70 3e-10
AM420293_883(AM420293|pid:none) Saccharopolyspora erythraea NRRL... 70 3e-10
BX293980_113(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 70 4e-10
AE017261_238(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 70 5e-10
CU459003_2752(CU459003|pid:none) Magnetospirillum gryphiswaldens... 70 5e-10
EF030839_1(EF030839|pid:none) Lactobacillus paracasei strain 119... 69 7e-10
AY643478_42(AY643478|pid:none) Edwardsiella tarda strain PPD130/... 69 7e-10
CP000781_4256(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 69 7e-10
CP000230_2869(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 69 9e-10
BA000028_2616(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 68 2e-09
CP000749_3048(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 67 3e-09
CP000927_4917(CP000927|pid:none) Caulobacter sp. K31, complete g... 67 4e-09
CP000916_284(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 65 1e-08
AE016816_436(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 65 1e-08
CP000941_1099(CP000941|pid:none) Xylella fastidiosa M12, complet... 64 3e-08
CP000302_396(CP000302|pid:none) Shewanella denitrificans OS217, ... 63 6e-08
A87700(A87700) threonine dehydratase [imported] - Caulobacter cr... 63 6e-08
CP000394_2290(CP000394|pid:none) Granulibacter bethesdensis CGDN... 62 8e-08
AM920689_886(AM920689|pid:none) Xanthomonas campestris pv. campe... 62 1e-07
AM743169_3701(AM743169|pid:none) Stenotrophomonas maltophilia K2... 62 1e-07
CP001111_3325(CP001111|pid:none) Stenotrophomonas maltophilia R5... 62 1e-07
AE008922_3277(AE008922|pid:none) Xanthomonas campestris pv. camp... 62 1e-07
AE008923_3405(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 61 2e-07
CR382125_859(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 61 2e-07
AM295250_1557(AM295250|pid:none) Staphylococcus carnosus subsp. ... 61 2e-07
AE006469_1030(AE006469|pid:none) Sinorhizobium meliloti 1021 pla... 61 2e-07
AM263198_2010(AM263198|pid:none) Listeria welshimeri serovar 6b ... 61 2e-07
CP000804_730(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 61 2e-07
AG1323(AG1323) threonine dehydratase homolog ilvA [imported] - L... 60 3e-07
AH1694(AH1694) threonine dehydratase homolog ilvA [imported] - L... 60 3e-07
AF105341_1(AF105341|pid:none) Listeria monocytogenes threonine d... 60 3e-07
(Q7A4H2) RecName: Full=Threonine dehydratase biosynthetic; ... 60 3e-07
(Q3V7T4) RecName: Full=Threonine dehydratase biosynthetic; ... 60 3e-07
CP001175_559(CP001175|pid:none) Listeria monocytogenes HCC23, co... 60 4e-07
CP001069_229(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 60 5e-07
(Q3V7T5) RecName: Full=Threonine dehydratase biosynthetic; ... 60 5e-07
CP001330_398(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 59 7e-07
CP000686_168(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 59 9e-07
CP000916_285(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 59 9e-07
CP000931_3904(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 59 1e-06
FN392319_1017(FN392319|pid:none) Pichia pastoris GS115 chromosom... 59 1e-06
CU928166_196(CU928166|pid:none) Kluyveromyces thermotolerans str... 59 1e-06
CP000539_668(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 58 2e-06
CP000473_1703(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 57 3e-06
CP001189_2957(CP001189|pid:none) Gluconacetobacter diazotrophicu... 57 3e-06
AM889285_3341(AM889285|pid:none) Gluconacetobacter diazotrophicu... 57 3e-06
CP000804_4244(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 57 3e-06
CU928174_114(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 57 3e-06
BA000012_5619(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 57 4e-06
CP001103_3986(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 57 5e-06
CP000764_1390(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 57 5e-06
CP000453_85(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1,... 57 5e-06
(P55664) RecName: Full=Putative threonine dehydratase; ... 57 5e-06
CP000961_443(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 57 5e-06
CP000267_721(CP000267|pid:none) Rhodoferax ferrireducens T118, c... 56 6e-06
CP000884_5666(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 56 8e-06
CP000851_348(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 56 8e-06
CP000686_4295(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 56 8e-06
CP000744_4022(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 56 8e-06
CP000529_636(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 56 8e-06
CP000606_292(CP000606|pid:none) Shewanella loihica PV-4, complet... 56 8e-06
CP000514_3399(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 56 8e-06
CP001186_1683(CP001186|pid:none) Bacillus cereus G9842, complete... 56 8e-06
CP000512_909(CP000512|pid:none) Acidovorax citrulli AAC00-1, com... 55 1e-05
CP001010_1349(CP001010|pid:none) Polynucleobacter necessarius su... 55 1e-05
CP000094_5376(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 55 1e-05
AP008955_994(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 55 1e-05
CP000316_732(CP000316|pid:none) Polaromonas sp. JS666, complete ... 55 1e-05
AJ007788_2(AJ007788|pid:none) Bacillus cereus ilvD (partial), il... 55 1e-05
CP000951_1588(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 55 2e-05
CP001635_1071(CP001635|pid:none) Variovorax paradoxus S110 chrom... 55 2e-05
AM420293_3324(AM420293|pid:none) Saccharopolyspora erythraea NRR... 55 2e-05
AE017194_1926(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 55 2e-05
CT971583_1222(CT971583|pid:none) Synechococcus WH7803 complete g... 54 2e-05
CP000388_4215(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 54 2e-05
CP000510_3154(CP000510|pid:none) Psychromonas ingrahamii 37, com... 54 2e-05
AM260479_425(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 54 2e-05
CP000058_1597(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 54 2e-05
CP000499_481(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 54 2e-05
CP000090_413(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 54 2e-05
AM902716_466(AM902716|pid:none) Bordetella petrii strain DSM 128... 54 2e-05
(O42615) RecName: Full=Threonine dehydratase, mitochondrial; ... 54 3e-05
AC090882_29(AC090882|pid:none) Oryza sativa chromosome 3 BAC OSJ... 54 3e-05
CP000435_1378(CP000435|pid:none) Synechococcus sp. CC9311, compl... 54 3e-05
CP001283_1803(CP001283|pid:none) Bacillus cereus AH820, complete... 54 3e-05
CP000949_2915(CP000949|pid:none) Pseudomonas putida W619, comple... 54 4e-05
CP000057_788(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 54 4e-05
CP001177_1801(CP001177|pid:none) Bacillus cereus AH187, complete... 54 4e-05
CP000616_10(CP000616|pid:none) Burkholderia vietnamiensis G4 chr... 54 4e-05
AL646053_1517(AL646053|pid:none) Ralstonia solanacearum GMI1000 ... 54 4e-05
CP001176_1718(CP001176|pid:none) Bacillus cereus B4264, complete... 54 4e-05
CP001638_1437(CP001638|pid:none) Geobacillus sp. WCH70, complete... 54 4e-05
CP000227_1754(CP000227|pid:none) Bacillus cereus Q1, complete ge... 54 4e-05
CP000001_1646(CP000001|pid:none) Bacillus cereus E33L, complete ... 54 4e-05
CP000903_1681(CP000903|pid:none) Bacillus weihenstephanensis KBA... 54 4e-05
CR382138_95(CR382138|pid:none) Debaryomyces hansenii strain CBS7... 54 4e-05
AE016853_5162(AE016853|pid:none) Pseudomonas syringae pv. tomato... 54 4e-05
CT573326_2737(CT573326|pid:none) Pseudomonas entomophila str. L4... 54 4e-05
AE016877_1645(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 53 5e-05
CP000446_363(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 53 5e-05
CP000891_4103(CP000891|pid:none) Shewanella baltica OS195, compl... 53 5e-05
CP000316_4170(CP000316|pid:none) Polaromonas sp. JS666, complete... 53 5e-05
CU459141_1021(CU459141|pid:none) Acinetobacter baumannii str. AY... 53 5e-05
CP001275_5(CP001275|pid:none) Thermomicrobium roseum DSM 5159, c... 53 5e-05
(P46493) RecName: Full=Threonine dehydratase biosynthetic; ... 53 5e-05
AM902716_903(AM902716|pid:none) Bordetella petrii strain DSM 128... 53 5e-05
CP000884_5737(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 53 5e-05
CP000058_4659(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 53 5e-05
CP000444_3635(CP000444|pid:none) Shewanella sp. MR-7, complete g... 53 5e-05
CP000075_1671(CP000075|pid:none) Pseudomonas syringae pv. syring... 53 5e-05
AE017223_981(AE017223|pid:none) Brucella abortus biovar 1 str. 9... 53 7e-05
AE008917_934(AE008917|pid:none) Brucella melitensis 16M chromoso... 53 7e-05
CP000712_2280(CP000712|pid:none) Pseudomonas putida F1, complete... 53 7e-05
CP000739_119(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 53 7e-05
CP000863_2593(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 53 7e-05
AE015451_3414(AE015451|pid:none) Pseudomonas putida KT2440 compl... 53 7e-05
CP000815_160(CP000815|pid:none) Paulinella chromatophora chromat... 53 7e-05
CP000521_2640(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 53 7e-05
CP000887_946(CP000887|pid:none) Brucella abortus S19 chromosome ... 53 7e-05
CP000560_1906(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 52 9e-05
AM270071_79(AM270071|pid:none) Aspergillus niger contig An04c010... 52 9e-05
CP000091_879(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 52 9e-05
CP000109_1562(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 52 9e-05
CP000513_303(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 52 9e-05
CP000712_4997(CP000712|pid:none) Pseudomonas putida F1, complete... 52 1e-04
CP000744_422(CP000744|pid:none) Pseudomonas aeruginosa PA7, comp... 52 1e-04
CP000438_346(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA1... 52 1e-04
AE004091_332(AE004091|pid:none) Pseudomonas aeruginosa PAO1, com... 52 1e-04
BA000043_1773(BA000043|pid:none) Geobacillus kaustophilus HTA426... 52 1e-04
AM398681_437(AM398681|pid:none) Flavobacterium psychrophilum JIP... 52 1e-04
CP000911_1041(CP000911|pid:none) Brucella suis ATCC 23445 chromo... 52 1e-04
U92974_23(U92974|pid:none) Lactococcus lactis unknown gene, part... 52 1e-04
AM181176_2717(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 52 1e-04
AL591985_421(AL591985|pid:none) Sinorhizobium meliloti 1021 plas... 52 1e-04
CT978603_1391(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 52 1e-04
CP000746_413(CP000746|pid:none) Actinobacillus succinogenes 130Z... 52 1e-04
(Q02145) RecName: Full=Threonine dehydratase biosynthetic; ... 52 1e-04
CP000283_2094(CP000283|pid:none) Rhodopseudomonas palustris BisB... 52 1e-04
CP000926_5168(CP000926|pid:none) Pseudomonas putida GB-1, comple... 52 1e-04
BX640440_304(BX640440|pid:none) Bordetella bronchiseptica strain... 52 1e-04
CR378674_178(CR378674|pid:none) Photobacterium profundum SS9; se... 52 1e-04
CP000554_1526(CP000554|pid:none) Prochlorococcus marinus str. MI... 51 2e-04
CP001154_972(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 51 2e-04
AM942444_732(AM942444|pid:none) Corynebacterium urealyticum DSM ... 51 2e-04
CU633749_365(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 51 2e-04
CP000949_316(CP000949|pid:none) Pseudomonas putida W619, complet... 51 2e-04
CP000503_3703(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 51 2e-04
CP000094_2617(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 51 2e-04
CP000553_966(CP000553|pid:none) Prochlorococcus marinus str. NAT... 51 2e-04
(O59791) RecName: Full=Uncharacterized protein C320.14; &AL0222... 51 2e-04
CP001321_959(CP001321|pid:none) Haemophilus parasuis SH0165, com... 51 2e-04
AM747722_25(AM747722|pid:none) Burkholderia cenocepacia J2315 ch... 51 3e-04
AE014299_4225(AE014299|pid:none) Shewanella oneidensis MR-1, com... 51 3e-04
AE004091_2684(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 51 3e-04
AE015451_4373(AE015451|pid:none) Pseudomonas putida KT2440 compl... 51 3e-04
CP000680_4193(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 51 3e-04
CP000817_898(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 51 3e-04
CP000089_4090(CP000089|pid:none) Dechloromonas aromatica RCB, co... 51 3e-04
CP000922_1435(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 51 3e-04
CP000282_3376(CP000282|pid:none) Saccharophagus degradans 2-40, ... 51 3e-04
CP001013_3398(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 50 3e-04
A69644(A69644) threonine ammonia-lyase (EC 4.3.1.19) ilvA [simil... 50 4e-04
AB433985_1(AB433985|pid:none) Delftia sp. HT23 lthadh gene for L... 50 4e-04
CP000563_3957(CP000563|pid:none) Shewanella baltica OS155, compl... 50 4e-04
(O94634) RecName: Full=Threonine dehydratase, mitochondrial; ... 50 4e-04
CP000697_899(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 50 4e-04
BX640411_139(BX640411|pid:none) Bordetella pertussis strain Toha... 50 6e-04
CP000644_105(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 50 6e-04
CP000352_354(CP000352|pid:none) Ralstonia metallidurans CH34, co... 50 6e-04
AE016795_971(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 50 6e-04
AJ938182_1303(AJ938182|pid:none) Staphylococcus aureus RF122 com... 50 6e-04
CP000117_2736(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 50 6e-04
CP000383_205(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 50 6e-04
CP001337_1235(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 50 6e-04
A98146(A98146) probable threonin dehydratase (threonin deaminase... 49 7e-04
CP000512_3161(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 49 7e-04
CP001472_1403(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 49 7e-04
CP000725_523(CP000725|pid:none) Streptococcus gordonii str. Chal... 49 7e-04
AM286415_3060(AM286415|pid:none) Yersinia enterocolitica subsp. ... 49 7e-04
CP001037_1174(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 49 7e-04
CP000934_239(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 49 0.001
AL954747_701(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 49 0.001
AE000513_553(AE000513|pid:none) Deinococcus radiodurans R1 chrom... 49 0.001
CP001032_1143(CP001032|pid:none) Opitutus terrae PB90-1, complet... 49 0.001
CR931997_1313(CR931997|pid:none) Corynebacterium jeikeium K411 c... 49 0.001
(P36007) RecName: Full=Threo-3-hydroxyaspartate ammonia-lyase; ... 49 0.001
CP000270_3521(CP000270|pid:none) Burkholderia xenovorans LB400 c... 49 0.001
CU695242_173(CU695242|pid:none) Ralstonia solanacearum strain Mo... 49 0.001
BX640434_28(BX640434|pid:none) Bordetella parapertussis strain 1... 49 0.001
BX640421_157(BX640421|pid:none) Bordetella pertussis strain Toha... 49 0.001
CU207366_2083(CU207366|pid:none) Gramella forsetii KT0803 comple... 49 0.001
CP001614_343(CP001614|pid:none) Teredinibacter turnerae T7901, c... 49 0.001
(Q9CKJ2) RecName: Full=Threonine dehydratase biosynthetic; ... 49 0.001
EF678311_1(EF678311|pid:none) Picea sitchensis clone WS02913_P07... 48 0.002
AF1839(AF1839) threonine dehydratase [imported] - Nostoc sp. (st... 48 0.002
CU234118_5263(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 48 0.002
CP001281_673(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 48 0.002
CP001291_299(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 48 0.002
CP000269_3116(CP000269|pid:none) Janthinobacterium sp. Marseille... 48 0.002
EF678401_1(EF678401|pid:none) Picea sitchensis clone WS02919_O03... 48 0.002
AM236080_1959(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 48 0.002
CP000159_1236(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 48 0.002
CP000557_2238(CP000557|pid:none) Geobacillus thermodenitrificans... 48 0.002
CP000615_1654(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 48 0.002
BX548174_1035(BX548174|pid:none) Prochlorococcus marinus MED4 co... 48 0.002
CP000555_3116(CP000555|pid:none) Methylibium petroleiphilum PM1,... 48 0.002
CP000656_3282(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 48 0.002
AM920428_773(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 47 0.003
AE004969_412(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, c... 47 0.003
CP000023_145(CP000023|pid:none) Streptococcus thermophilus LMG 1... 47 0.003
AL939106_272(AL939106|pid:none) Streptomyces coelicolor A3(2) co... 47 0.003
CP000133_1732(CP000133|pid:none) Rhizobium etli CFN 42, complete... 47 0.003
EU968332_1(EU968332|pid:none) Zea mays clone 319082 unknown mRNA. 47 0.003
AL157959_978(AL157959|pid:none) Neisseria meningitidis serogroup... 47 0.003
CP000680_3722(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 47 0.003
CP000094_2224(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 47 0.003
CP000381_796(CP000381|pid:none) Neisseria meningitidis 053442, c... 47 0.004
CP001027_257(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 47 0.004
AM942759_1217(AM942759|pid:none) Proteus mirabilis strain HI4320... 47 0.004
CP001192_1068(CP001192|pid:none) Rhizobium leguminosarum bv. tri... 47 0.004
CP000750_3325(CP000750|pid:none) Kineococcus radiotolerans SRS30... 47 0.004
CP001050_614(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945,... 47 0.004
AM421808_776(AM421808|pid:none) Neisseria meningitidis serogroup... 47 0.004
AE009952_4051(AE009952|pid:none) Yersinia pestis KIM, complete g... 47 0.004
CP000471_3603(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 47 0.005
CP000264_2738(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 47 0.005
CP001298_3123(CP001298|pid:none) Methylobacterium chloromethanic... 47 0.005
CP001510_3012(CP001510|pid:none) Methylobacterium extorquens AM1... 47 0.005
CP001191_1412(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 47 0.005
CP000615_1802(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 47 0.005
AB271213_1(AB271213|pid:none) Hordeum vulgare HvSR mRNA for seri... 47 0.005
CP000529_3306(CP000529|pid:none) Polaromonas naphthalenivorans C... 47 0.005
CP000908_2992(CP000908|pid:none) Methylobacterium extorquens PA1... 47 0.005
AE003852_27(AE003852|pid:none) Vibrio cholerae O1 biovar eltor s... 47 0.005
CP000551_950(CP000551|pid:none) Prochlorococcus marinus str. AS9... 47 0.005
CP000512_3697(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 47 0.005
AL049500_7(AL049500|pid:none) Arabidopsis thaliana DNA chromosom... 47 0.005
CU207211_2706(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 46 0.006
CP000116_2363(CP000116|pid:none) Thiobacillus denitrificans ATCC... 46 0.006
AM286415_4002(AM286415|pid:none) Yersinia enterocolitica subsp. ... 46 0.006
BT052623_1(BT052623|pid:none) Medicago truncatula clone MTYFD_FE... 46 0.006
CP000542_301(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 46 0.006
CP001074_1817(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 46 0.006
AC151526_28(AC151526|pid:none) Medicago truncatula clone mth2-78... 46 0.006
CP001052_3047(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 46 0.006
CP000301_3217(CP000301|pid:none) Rhodopseudomonas palustris BisB... 46 0.006
CP000284_128(CP000284|pid:none) Methylobacillus flagellatus KT, ... 46 0.006
AM902716_4907(AM902716|pid:none) Bordetella petrii strain DSM 12... 46 0.006
M87049_11(M87049|pid:none) E. coli genomic sequence of the regio... 46 0.008
CP000802_3780(CP000802|pid:none) Escherichia coli HS, complete g... 46 0.008
CU468135_188(CU468135|pid:none) Erwinia tasmaniensis strain ET1/... 46 0.008
CP000441_662(CP000441|pid:none) Burkholderia ambifaria AMMD chro... 46 0.008
AE016827_2218(AE016827|pid:none) Mannheimia succiniciproducens M... 46 0.008
CP000117_674(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 46 0.008
CP000749_4088(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 46 0.008
CP000353_1200(CP000353|pid:none) Ralstonia metallidurans CH34 me... 46 0.008
(P04968) RecName: Full=Threonine dehydratase biosynthetic; ... 46 0.008
CP000946_4138(CP000946|pid:none) Escherichia coli ATCC 8739, com... 46 0.008
CP000463_1456(CP000463|pid:none) Rhodopseudomonas palustris BisA... 46 0.008
AM942759_3273(AM942759|pid:none) Proteus mirabilis strain HI4320... 46 0.008
CP000384_2716(CP000384|pid:none) Mycobacterium sp. MCS, complete... 46 0.008
K03503_2(K03503|pid:none) E.coli ilvA gene encoding threonine de... 46 0.008
AM933172_3696(AM933172|pid:none) Salmonella enterica subsp. ente... 45 0.011
CP000442_442(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 45 0.011
CP001144_3889(CP001144|pid:none) Salmonella enterica subsp. ente... 45 0.011
CP000909_1219(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 45 0.011
BX571874_222(BX571874|pid:none) Photorhabdus luminescens subsp. ... 45 0.011
CP000580_2728(CP000580|pid:none) Mycobacterium sp. JLS, complete... 45 0.011
AM238664_868(AM238664|pid:none) Streptomyces ambofaciens ATCC 23... 45 0.011
CP000712_2483(CP000712|pid:none) Pseudomonas putida F1, complete... 45 0.011
CP000450_1122(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 45 0.014
AL591688_1633(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 45 0.014
CP000878_852(CP000878|pid:none) Prochlorococcus marinus str. MIT... 45 0.014
BX950851_4198(BX950851|pid:none) Erwinia carotovora subsp. atros... 45 0.014
CR954246_2702(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 45 0.014
CU928163_4205(CU928163|pid:none) Escherichia coli UMN026 chromos... 45 0.018
CP001138_3854(CP001138|pid:none) Salmonella enterica subsp. ente... 45 0.018
CP000127_2565(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 45 0.018
AK031687_1(AK031687|pid:none) Mus musculus 13 days embryo male t... 45 0.018
CU928164_2995(CU928164|pid:none) Escherichia coli IAI39 chromoso... 45 0.018
CP000243_4239(CP000243|pid:none) Escherichia coli UTI89, complet... 45 0.018
AE005674_3849(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 45 0.018
GN098600_1(GN098600|pid:none) Sequence 3381 from Patent WO200903... 45 0.018
CP000468_3740(CP000468|pid:none) Escherichia coli APEC O1, compl... 45 0.018
BT037054_1(BT037054|pid:none) Zea mays full-length cDNA clone ZM... 45 0.018
CP000647_4219(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 45 0.018
AP006725_119(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 45 0.018
CU928162_4340(CU928162|pid:none) Escherichia coli ED1a chromosom... 45 0.018
CP000247_3931(CP000247|pid:none) Escherichia coli 536, complete ... 45 0.018
AK028034_1(AK028034|pid:none) Mus musculus 18-day embryo whole b... 45 0.018
CP001002_420(CP001002|pid:none) Methylobacterium radiotolerans J... 45 0.018
AM747721_1594(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 45 0.018
CP000964_5278(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 45 0.018
(Q9QZX7) RecName: Full=Serine racemase; EC=5.1.1.18; &... 45 0.018
AP009153_1242(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 45 0.018
CP000770_223(CP000770|pid:none) Candidatus Sulcia muelleri GWSS,... 45 0.018
CP000853_825(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 45 0.018
CP000316_941(CP000316|pid:none) Polaromonas sp. JS666, complete ... 44 0.024
DWEBTT(JT0278) threonine ammonia-lyase (EC 4.3.1.19), biosynthet... 44 0.024
(P20506) RecName: Full=Threonine dehydratase biosynthetic; ... 44 0.024
AB0924(AB0924) threonine ammonia-lyase (EC 4.3.1.19) [similarity... 44 0.024
CS024085_1(CS024085|pid:none) Sequence 7 from Patent WO200501484... 44 0.024
CP000724_524(CP000724|pid:none) Alkaliphilus metalliredigens QYM... 44 0.024
CP001635_3981(CP001635|pid:none) Variovorax paradoxus S110 chrom... 44 0.031
AL834378_1(AL834378|pid:none) Homo sapiens mRNA; cDNA DKFZp762A2... 44 0.031
EU966029_1(EU966029|pid:none) Zea mays clone 290968 unknown mRNA. 44 0.031
(Q9GZT4) RecName: Full=Serine racemase; EC=5.1.1.18; &... 44 0.031
AB173668_1(AB173668|pid:none) Macaca fascicularis brain cDNA clo... 44 0.031
BA000035_2024(BA000035|pid:none) Corynebacterium efficiens YS-31... 44 0.031
CP000950_8(CP000950|pid:none) Yersinia pseudotuberculosis YPIII,... 44 0.031
GN098596_1(GN098596|pid:none) Sequence 3377 from Patent WO200903... 44 0.031
CP000569_1431(CP000569|pid:none) Actinobacillus pleuropneumoniae... 44 0.031
AY542311_15(AY542311|pid:none) Sorghum bicolor clone SB20O07 b1-... 44 0.031
BX571861_189(BX571861|pid:none) Photorhabdus luminescens subsp. ... 44 0.031
CP000852_125(CP000852|pid:none) Caldivirga maquilingensis IC-167... 44 0.031
EU686636_15(EU686636|pid:none) Uncultured marine group III eurya... 44 0.031
CP000738_1359(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 44 0.040
BX950851_2018(BX950851|pid:none) Erwinia carotovora subsp. atros... 44 0.040
CP000512_4363(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 44 0.040
BA000022_828(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 44 0.040
AB171134_1(AB171134|pid:none) Macaca fascicularis brain cDNA clo... 44 0.040
AG0496(AG0496) threonine ammonia-lyase (EC 4.3.1.19) [imported] ... 44 0.041
CP000826_37(CP000826|pid:none) Serratia proteamaculans 568, comp... 43 0.053
CP000285_20(CP000285|pid:none) Chromohalobacter salexigens DSM 3... 43 0.053
(A0JNI4) RecName: Full=Serine racemase; EC=5.1.1.18; &... 43 0.053
EF571259_1(EF571259|pid:none) Mesorhizobium ciceri threonine deh... 43 0.053
CP000576_952(CP000576|pid:none) Prochlorococcus marinus str. MIT... 43 0.053
AP009153_2506(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 43 0.053
CP000949_2660(CP000949|pid:none) Pseudomonas putida W619, comple... 43 0.053
EF215080_1(EF215080|pid:none) Callithrix jacchus clone G10-49.3_... 43 0.053
BX640426_125(BX640426|pid:none) Bordetella parapertussis strain ... 43 0.053
CP001115_103(CP001115|pid:none) Deinococcus deserti VCD115 plasm... 43 0.069
CP000828_4351(CP000828|pid:none) Acaryochloris marina MBIC11017,... 43 0.069
AE005672_427(AE005672|pid:none) Streptococcus pneumoniae TIGR4, ... 43 0.069
AP009384_2299(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 43 0.069
CP000511_2974(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 43 0.069
CP000943_4359(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 43 0.069
AE015451_3165(AE015451|pid:none) Pseudomonas putida KT2440 compl... 43 0.069
CP001349_146(CP001349|pid:none) Methylobacterium nodulans ORS 20... 42 0.090
CP000571_1799(CP000571|pid:none) Burkholderia pseudomallei 668 c... 42 0.090
CP000011_958(CP000011|pid:none) Burkholderia mallei ATCC 23344 c... 42 0.090
CT573326_3701(CT573326|pid:none) Pseudomonas entomophila str. L4... 42 0.090
CP000378_2109(CP000378|pid:none) Burkholderia cenocepacia AU 105... 42 0.090
AE005174_4733(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 42 0.090
AM286415_147(AM286415|pid:none) Yersinia enterocolitica subsp. e... 42 0.090
CP001620_1200(CP001620|pid:none) Corynebacterium kroppenstedtii ... 42 0.090
CP001504_1364(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 42 0.12
AY596297_1089(AY596297|pid:none) Haloarcula marismortui ATCC 430... 42 0.12
CP000151_2875(CP000151|pid:none) Burkholderia sp. 383 chromosome... 42 0.15
AX063857_1(AX063857|pid:none) Sequence 139 from Patent WO0100843... 42 0.15
CP001389_1455(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 42 0.15
AP009153_173(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 42 0.15
AE005673_3079(AE005673|pid:none) Caulobacter crescentus CB15, co... 42 0.15
CP000949_3830(CP000949|pid:none) Pseudomonas putida W619, comple... 42 0.15
CP000440_2777(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 42 0.15
CP001037_729(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 42 0.15
CP000542_2106(CP000542|pid:none) Verminephrobacter eiseniae EF01... 41 0.20
AP008957_1970(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 41 0.20
AP009384_1193(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 41 0.20
CP000377_3010(CP000377|pid:none) Silicibacter sp. TM1040, comple... 41 0.20
(P53607) RecName: Full=Threonine dehydratase biosynthetic; ... 41 0.20
CP000086_2049(CP000086|pid:none) Burkholderia thailandensis E264... 41 0.20
CP000031_3264(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 41 0.26
CP001025_2628(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 41 0.26
CP000283_1629(CP000283|pid:none) Rhodopseudomonas palustris BisB... 41 0.26
CP000636_95(CP000636|pid:none) Agrobacterium vitis S4 plasmid pA... 40 0.34
BA000012_2703(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 40 0.34
CP000285_317(CP000285|pid:none) Chromohalobacter salexigens DSM ... 40 0.34
CP000270_2117(CP000270|pid:none) Burkholderia xenovorans LB400 c... 40 0.34
CP000947_49(CP000947|pid:none) Haemophilus somnus 2336, complete... 40 0.34
CP000489_492(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 40 0.45
CP000699_1578(CP000699|pid:none) Sphingomonas wittichii RW1, com... 40 0.45

>AC116977_71(AC116977|pid:none) Dictyostelium discoideum chromosome 2
map 5515173-5817331 strain AX4, complete sequence.
Length = 1173

Score = 1005 bits (2598), Expect = 0.0
Identities = 500/500 (100%), Positives = 500/500 (100%)
Frame = +1

Query: 301 HQNNPVKNLKGFDDIGEGILRFEGSKEIDFIGSVKRVHSMMKDYLKKTPQYDYELLSQLF 480
HQNNPVKNLKGFDDIGEGILRFEGSKEIDFIGSVKRVHSMMKDYLKKTPQYDYELLSQLF
Sbjct: 83 HQNNPVKNLKGFDDIGEGILRFEGSKEIDFIGSVKRVHSMMKDYLKKTPQYDYELLSQLF 142

Query: 481 KCDLQLKLENLQLFGDIYVRNCFSILLSNYFNQAKDLGKEFRQIGGFVLVINPMDIESQP 660
KCDLQLKLENLQLFGDIYVRNCFSILLSNYFNQAKDLGKEFRQIGGFVLVINPMDIESQP
Sbjct: 143 KCDLQLKLENLQLFGDIYVRNCFSILLSNYFNQAKDLGKEFRQIGGFVLVINPMDIESQP 202

Query: 661 MVTGSILTALHLKMKCIIYVGPGNLPLSQITRLYMCHARGAKIIFHKGDVSSCYTRAWQH 840
MVTGSILTALHLKMKCIIYVGPGNLPLSQITRLYMCHARGAKIIFHKGDVSSCYTRAWQH
Sbjct: 203 MVTGSILTALHLKMKCIIYVGPGNLPLSQITRLYMCHARGAKIIFHKGDVSSCYTRAWQH 262

Query: 841 AKDMSMVFLDCKFIPHFSLLGAATIAHEMMEDSPDRETIIIPLRLYSQGWSYVSGISIFY 1020
AKDMSMVFLDCKFIPHFSLLGAATIAHEMMEDSPDRETIIIPLRLYSQGWSYVSGISIFY
Sbjct: 263 AKDMSMVFLDCKFIPHFSLLGAATIAHEMMEDSPDRETIIIPLRLYSQGWSYVSGISIFY 322

Query: 1021 KIMKPEIKIIVVQMTDDLFGKDIEGKEFNRQSLFPDRLEIGWLALIHDQSDLTNVFDAFD 1200
KIMKPEIKIIVVQMTDDLFGKDIEGKEFNRQSLFPDRLEIGWLALIHDQSDLTNVFDAFD
Sbjct: 323 KIMKPEIKIIVVQMTDDLFGKDIEGKEFNRQSLFPDRLEIGWLALIHDQSDLTNVFDAFD 382

Query: 1201 SRNQGKFSDKDLEALLISIGGDPTRNKSMCPKSSLSQTEFVHEVITEITNGLEQLEEKFS 1380
SRNQGKFSDKDLEALLISIGGDPTRNKSMCPKSSLSQTEFVHEVITEITNGLEQLEEKFS
Sbjct: 383 SRNQGKFSDKDLEALLISIGGDPTRNKSMCPKSSLSQTEFVHEVITEITNGLEQLEEKFS 442

Query: 1381 YFLPQFKLDNLINHKIIDQLVTATEDQASIAFIKCLEYTHTLTNGKGSIALGGLMSGNIH 1560
YFLPQFKLDNLINHKIIDQLVTATEDQASIAFIKCLEYTHTLTNGKGSIALGGLMSGNIH
Sbjct: 443 YFLPQFKLDNLINHKIIDQLVTATEDQASIAFIKCLEYTHTLTNGKGSIALGGLMSGNIH 502

Query: 1561 LRPDEKVLVMLSGGYVDVIDFQTILNYGLDITGQSFEIELDLPDNTTSLNKVLNVIGENK 1740
LRPDEKVLVMLSGGYVDVIDFQTILNYGLDITGQSFEIELDLPDNTTSLNKVLNVIGENK
Sbjct: 503 LRPDEKVLVMLSGGYVDVIDFQTILNYGLDITGQSFEIELDLPDNTTSLNKVLNVIGENK 562

Query: 1741 VSVMEVLMDRSCETLKQYHV 1800
VSVMEVLMDRSCETLKQYHV
Sbjct: 563 VSVMEVLMDRSCETLKQYHV 582

Score = 476 bits (1226), Expect = e-132
Identities = 240/250 (96%), Positives = 242/250 (96%)
Frame = +3

Query: 1779 NFKTISCXXXXNQFRYIEPAVLSLADGTSVKMPGGVHTQVLHDMVDEYVTVSENEIASTI 1958
N +S NQFRYIEPAVLSLADGT+VKMPGGVHTQVLHDMVDEYVTVSENEIASTI
Sbjct: 921 NVSPLSEFKQTNQFRYIEPAVLSLADGTNVKMPGGVHTQVLHDMVDEYVTVSENEIASTI 980

Query: 1959 VHLLYNSRTVSEGAGCLGLAALMHKKIKVRKDERVCVIICGGNIDMSTLRQVYEYGLRSL 2138
VHLLYNSRTVSEGAGCLGLAALMHKKIKVRKDERVCVIICGGNIDMSTLRQVYEYGLRSL
Sbjct: 981 VHLLYNSRTVSEGAGCLGLAALMHKKIKVRKDERVCVIICGGNIDMSTLRQVYEYGLRSL 1040

Query: 2139 GRSFTIHLTTWDYPGTLSKIIGLAARAELKVREIRHIRGGGNINWNEVIISLSFYSNSFN 2318
GRSFTIHLTTWDYPGTLSKIIGLAARAELKVREIRHIRGGGNINWNEVIISLSFYSNSFN
Sbjct: 1041 GRSFTIHLTTWDYPGTLSKIIGLAARAELKVREIRHIRGGGNINWNEVIISLSFYSNSFN 1100

Query: 2319 HQNFFLSLLAQEGLFPKIVGRKYIKDNEIVYKIFDKSVDKKNKELKDTFSERQQLFLEQY 2498
HQNFFLSLLAQEGLFPKIVGRKYIKDNEIVYKIFDKSVDKKNKELKDTFSERQQLFLEQY
Sbjct: 1101 HQNFFLSLLAQEGLFPKIVGRKYIKDNEIVYKIFDKSVDKKNKELKDTFSERQQLFLEQY 1160

Query: 2499 GKQANVSLES 2528
GKQANVSLES
Sbjct: 1161 GKQANVSLES 1170

Score = 75.9 bits (185), Expect = 7e-12
Identities = 40/141 (28%), Positives = 73/141 (51%)
Frame = +3

Query: 1902 HDMVDEYVTVSENEIASTIVHLLYNSRTVSEGAGCLGLAALMHKKIKVRKDERVCVIICG 2081
H ++D+ VT +E++ + + L + T++ G G + L LM I +R DE+V V++ G
Sbjct: 456 HKIIDQLVTATEDQASIAFIKCLEYTHTLTNGKGSIALGGLMSGNIHLRPDEKVLVMLSG 515

Query: 2082 GNIDMSTLRQVYEYGLRSLGRSFTIHLTTWDYPGTLSKIIGLAARAELKVREIRHIRGGG 2261
G +D+ + + YGL G+SF I L D +L+K++ + ++ V E+ R
Sbjct: 516 GYVDVIDFQTILNYGLDITGQSFEIELDLPDNTTSLNKVLNVIGENKVSVMEVLMDRSCE 575

Query: 2262 NINWNEVIISLSFYSNSFNHQ 2324
+ V S+ +S +F Q
Sbjct: 576 TLKQYHVRTSIQCHSRNFEQQ 596

Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/113 (30%), Positives = 63/113 (55%)
Frame = +1

Query: 1420 HKIIDQLVTATEDQASIAFIKCLEYTHTLTNGKGSIALGGLMSGNIHLRPDEKVLVMLSG 1599
H ++D+ VT +E++ + + L + T++ G G + L LM I +R DE+V V++ G
Sbjct: 962 HDMVDEYVTVSENEIASTIVHLLYNSRTVSEGAGCLGLAALMHKKIKVRKDERVCVIICG 1021

Query: 1600 GYVDVIDFQTILNYGLDITGQSFEIELDLPDNTTSLNKVLNVIGENKVSVMEV 1758
G +D+ + + YGL G+SF I L D +L+K++ + ++ V E+
Sbjct: 1022 GNIDMSTLRQVYEYGLRSLGRSFTIHLTTWDYPGTLSKIIGLAARAELKVREI 1074

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,632,090,991
Number of extensions: 70317758
Number of successful extensions: 169826
Number of sequences better than 10.0: 555
Number of HSP's gapped: 169433
Number of HSP's successfully gapped: 916
Length of query: 896
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 758
Effective length of database: 604,535,722
Effective search space: 458238077276
Effective search space used: 458238077276
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.37 alm: 0.40 top: 0.53 tms: 0.00 mit: 0.22 mip: 0.06
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: nuclear
32.0 %: cytoplasmic
20.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U15915-1 is nuc

VS (DIR, S) 0
VH (FL, L) 3
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 2
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 1
FC (DIR, S) 1
FC-IC (SUB) 0