>Contig-U15884-1 (Contig-U15884-1Q) /CSM_Contig/Contig-U15884-1Q.Seq.d
AATTTTTTTTAATTACTTTTCAGTTTCAAACTCATCGACCCCACTATTGT
TTTTTTTATTTTTTTTATACTTTTTTCTGTTTTAGATATATAATTTTTTT
TTTTCAGATATTTTAAAAAGATGGTTGAAATAAAAGATAAAGAAATTAAT
AATAATAATAATTATAGTAAAAAAATTATATTACCCGTTGGTGGTGTTAC
AGTTGGTAGTATCTTTGGATATGCATTACAAAAAGGTAATGTTTATTTAC
CAAGTGTAATTCAAGGACAAATGAATTTTACCAATTTTACAATGTTAAAA
ATGTTTATGACAGCATCTTTAACATCATCATTGGCAATAACATTTTTAAA
ATCTCAAAAATTAATTGTACTTGAAAAGTCTTCAACAATGTATAAAAGAA
ATATAATTGGTGGATTTATAATGGGATCTGGTATATCATTGACTGGTGCA
TGTCCAGGCACTGTTTTAGCTCAAATACC----------TGGTTTTGTCC
AATAGTTACATTTCAAAATTATTACCATCAACTCAACCAACTTCAAAATC
CTCAACCACTGTTTATGAGAAATTTAAGATTTCAATGTCAAAAGCAACAA
TACCATTCTCAATTATGATTGCACTTGTACTCTATTTAATTGAATCTAAA
TTTCCATGGCAAGTTGATAGTGGTGTATCAAAGAGTATCTCAATATTTGG
TTCTATCAGTGAGAGTAAAGTTTGGTCACCTTATGTTGCTGGTATCACTA
TTGGCTTATTACAAATCCCAAGTTTCTTGATTTCAAATACGGGTTTAGGT
TGTAGTTCTGCATATGTTACAGTTGGCTCAAAAGTTTGTAATGCCGTTAG
TTGTACCGTAGATTACTTTAAAAGTTTTAATACAACCGTTCGTTCAATTT
ATGGTCCACTATTAAATTTAGGTATCATTGGTGGTGCTTATTTGGCTTCT
CGTTCAAATCCTGCTCCTTTAATTGAACAACTCAATAATCAATCAACTCT
AAATCACTTTTTAGGTGGTTTTGTTTTATTATTTGGTGCTCGTCTTAATG
GTGGATGTACTTCAAATGGTTTAACCTCGATGGGTAAATTAGAATTTAGT
AGTTTCGTTACAATGGCCTCAATGTTTGCTGGAGGTGTTTTAACCTCTTA
TTTTTTGAATAAATAAAAAAATAAAATAAAAAATAAAATAAAAAATAAAA
AAATTAATTAATTAAAAAAAATATATTCTTTTAACAGATATTATTTAATA
CTCATAATATCATATAAATAATTAAATAAAATAAAAAAATTAAAATAAAA
AAAAAAAAAA

est1=VFH159F,1,383
est2=VFO393F,11,187
est3=CHB546F,15,193
est4=VFM580F,22,479
est5=CHA639F,27,190
est6=SSB802F,49,479
est7=VFO393Z,480,1096
est8=CHB546Z,495,1146
est9=CHA239Z,496,1159
est10=VFM580Z,539,1179
est11=CFI460Z,563,1177
est12=SFF339Z,759,1177
est13=SSB802Z,852,1304

nff*llfsfklidptivffiffilfsvldi*FFFFRYFKKMVEIKDKEINNNNNYSKKII
LPVGGVTVGSIFGYALQKGNVYLPSVIQGQMNFTNFTMLKMFMTASLTSSLAITFLKSQK
LIVLEKSSTMYKRNIIGGFIMGSGISLTGACPGTVLAQI---

---VLSNSYISKLLPSTQPTSKSSTTVYEKFKISMSKATIPFSIMIALVLYLIESKFPWQ
VDSGVSKSISIFGSISESKVWSPYVAGITIGLLQIPSFLISNTGLGCSSAYVTVGSKVCN
AVSCTVDYFKSFNTTVRSIYGPLLNLGIIGGAYLASRSNPAPLIEQLNNQSTLNHFLGGF
VLLFGARLNGGCTSNGLTSMGKLEFSSFVTMASMFAGGVLTSYFLNK*knkiknkiknkk
in*lkkiysfnryyliliisyk*lnkikklk*kkkk

Frame A:
nff*llfsfklidptivffiffilfsvldi*FFFFRYFKKMVEIKDKEINNNNNYSKKII
LPVGGVTVGSIFGYALQKGNVYLPSVIQGQMNFTNFTMLKMFMTASLTSSLAITFLKSQK
LIVLEKSSTMYKRNIIGGFIMGSGISLTGACPGTVLAQI---

---wfcpivtfqnyyhqlnqlqnpqplfmrnlrfqcqkqqyhsql*lhlysi*lnlnfhg
klivvyqrvsqylvlsvrvkfghlmllvsllayyksqvs*fqirv*vvvlhmlqlaqkfv
mplvvp*itlkvliqpfvqfmvhy*i*vslvvliwllvqilll*lnnsiinql*itf*vv
lfyylvlvlmvdvlqmv*prwvn*nlvvslqwpqcllevf*plif*inkkik*kik*kik
klin*kkyilltdii*ys*yhinn*ik*kn*nkkkk

Frame B:
iffnyfsvsnsstpllfflfflyfflf*iynfffsdilkrwlk*kikkliiiiiivkkly
yplvvlqlvvsldmhykkvmfiyqv*fkdk*ilpilqc*kcl*qhl*hhhwq*hf*nlkn
*lylkslqqcikei*lvdl*wdlvyh*lvhvqalf*lky---

---gfvq*lhfkiitinstnfkilnhcl*ei*dfnvksnntilnydctctlfn*i*isma
s**wcikeylniwfyq*e*slvtlccwyhywlitnpkfldfkygfrl*fcicyswlksl*
cr*lyrrll*kf*ynrsfnlwstikfryhwwclfgfsfkscsfn*ttq*sinskslfrwf
cfiiwcss*wwmyfkwfnldg*iri**frynglnvcwrcfnllffe*ikk*nkk*nkk*k
n*likkniff*qilfnthnii*iik*nkkikikkkk

Frame C:
fflitfqfqthrphycffyffytffcfryiifffqif*kdg*nkr*rn*****l**knyi
trwwcysw*ylwicitkr*clftkcnsrtnefyqfynvknvydsifniiignnifkiski
nct*kvfnnv*kkynwwiyngiwyiidwcmsrhcfssnt---

---VLSNSYISKLLPSTQPTSKSSTTVYEKFKISMSKATIPFSIMIALVLYLIESKFPWQ
VDSGVSKSISIFGSISESKVWSPYVAGITIGLLQIPSFLISNTGLGCSSAYVTVGSKVCN
AVSCTVDYFKSFNTTVRSIYGPLLNLGIIGGAYLASRSNPAPLIEQLNNQSTLNHFLGGF
VLLFGARLNGGCTSNGLTSMGKLEFSSFVTMASMFAGGVLTSYFLNK*knkiknkiknkk
in*lkkiysfnryyliliisyk*lnkikklk*kkkk

Query= Contig-U15884-1 (Contig-U15884-1Q)
/CSM_Contig/Contig-U15884-1Q.Seq.d
         (1310 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15884-1 (Contig-U15884-1Q) /CSM_Contig/Conti...  1893  0.0
Contig-U15316-1 (Contig-U15316-1Q) /CSM_Contig/Conti...    38  0.034
Contig-U14721-1 (Contig-U14721-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U12799-1 (Contig-U12799-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U05325-1 (Contig-U05325-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U16084-1 (Contig-U16084-1Q) /CSM_Contig/Conti...    34  0.52
Contig-U15832-1 (Contig-U15832-1Q) /CSM_Contig/Conti...    34  0.52
Contig-U14652-1 (Contig-U14652-1Q) /CSM_Contig/Conti...    34  0.52
Contig-U15500-1 (Contig-U15500-1Q) /CSM_Contig/Conti...    32  2.1

>Contig-U15884-1 (Contig-U15884-1Q) /CSM_Contig/Contig-U15884-1Q.Seq.d
          Length = 1310

 Score = 1893 bits (955), Expect = 0.0
 Identities = 985/985 (100%)
 Strand = Plus / Plus

                                                                        
Query: 176  ttatattacccgttggtggtgttacagttggtagtatctttggatatgcattacaaaaag 235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176  ttatattacccgttggtggtgttacagttggtagtatctttggatatgcattacaaaaag 235

                                                                        
Query: 236  gtaatgtttatttaccaagtgtaattcaaggacaaatgaattttaccaattttacaatgt 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236  gtaatgtttatttaccaagtgtaattcaaggacaaatgaattttaccaattttacaatgt 295

                                                                        
Query: 296  taaaaatgtttatgacagcatctttaacatcatcattggcaataacatttttaaaatctc 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  taaaaatgtttatgacagcatctttaacatcatcattggcaataacatttttaaaatctc 355

                                                                        
Query: 356  aaaaattaattgtacttgaaaagtcttcaacaatgtataaaagaaatataattggtggat 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  aaaaattaattgtacttgaaaagtcttcaacaatgtataaaagaaatataattggtggat 415

                                                                        
Query: 416  ttataatgggatctggtatatcattgactggtgcatgtccaggcactgttttagctcaaa 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  ttataatgggatctggtatatcattgactggtgcatgtccaggcactgttttagctcaaa 475

                                                                        
Query: 476  taccnnnnnnnnnntggttttgtccaatagttacatttcaaaattattaccatcaactca 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476  taccnnnnnnnnnntggttttgtccaatagttacatttcaaaattattaccatcaactca 535

                                                                        
Query: 536  accaacttcaaaatcctcaaccactgtttatgagaaatttaagatttcaatgtcaaaagc 595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536  accaacttcaaaatcctcaaccactgtttatgagaaatttaagatttcaatgtcaaaagc 595

                                                                        
Query: 596  aacaataccattctcaattatgattgcacttgtactctatttaattgaatctaaatttcc 655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  aacaataccattctcaattatgattgcacttgtactctatttaattgaatctaaatttcc 655

                                                                        
Query: 656  atggcaagttgatagtggtgtatcaaagagtatctcaatatttggttctatcagtgagag 715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  atggcaagttgatagtggtgtatcaaagagtatctcaatatttggttctatcagtgagag 715

                                                                        
Query: 716  taaagtttggtcaccttatgttgctggtatcactattggcttattacaaatcccaagttt 775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  taaagtttggtcaccttatgttgctggtatcactattggcttattacaaatcccaagttt 775

                                                                        
Query: 776  cttgatttcaaatacgggtttaggttgtagttctgcatatgttacagttggctcaaaagt 835
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  cttgatttcaaatacgggtttaggttgtagttctgcatatgttacagttggctcaaaagt 835

                                                                        
Query: 836  ttgtaatgccgttagttgtaccgtagattactttaaaagttttaatacaaccgttcgttc 895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  ttgtaatgccgttagttgtaccgtagattactttaaaagttttaatacaaccgttcgttc 895

                                                                        
Query: 896  aatttatggtccactattaaatttaggtatcattggtggtgcttatttggcttctcgttc 955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  aatttatggtccactattaaatttaggtatcattggtggtgcttatttggcttctcgttc 955

                                                                        
Query: 956  aaatcctgctcctttaattgaacaactcaataatcaatcaactctaaatcactttttagg 1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  aaatcctgctcctttaattgaacaactcaataatcaatcaactctaaatcactttttagg 1015

                                                                        
Query: 1016 tggttttgttttattatttggtgctcgtcttaatggtggatgtacttcaaatggtttaac 1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 tggttttgttttattatttggtgctcgtcttaatggtggatgtacttcaaatggtttaac 1075

                                                                        
Query: 1076 ctcgatgggtaaattagaatttagtagtttcgttacaatggcctcaatgtttgctggagg 1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 ctcgatgggtaaattagaatttagtagtttcgttacaatggcctcaatgtttgctggagg 1135

                                     
Query: 1136 tgttttaacctcttattttttgaat 1160
            |||||||||||||||||||||||||
Sbjct: 1136 tgttttaacctcttattttttgaat 1160


 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                           
Query: 1  aattttttttaattacttttcagtttcaaactcatcgaccccactattg 49
          |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aattttttttaattacttttcagtttcaaactcatcgaccccactattg 49


 Score = 34.2 bits (17), Expect = 0.52
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                           
Query: 77 ctgttttagatatataa 93
          |||||||||||||||||
Sbjct: 77 ctgttttagatatataa 93


>Contig-U15316-1 (Contig-U15316-1Q) /CSM_Contig/Contig-U15316-1Q.Seq.d
          Length = 1636

 Score = 38.2 bits (19), Expect = 0.034
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 635 tttaattgaatctaaattt 653
           |||||||||||||||||||
Sbjct: 75  tttaattgaatctaaattt 57


>Contig-U14721-1 (Contig-U14721-1Q) /CSM_Contig/Contig-U14721-1Q.Seq.d
          Length = 493

 Score = 36.2 bits (18), Expect = 0.13
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 275 attttaccaattttacaa 292
           ||||||||||||||||||
Sbjct: 242 attttaccaattttacaa 259


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,716
Number of Sequences: 8402
Number of extensions: 22716
Number of successful extensions: 2406
Number of sequences better than 10.0: 244
length of query: 1310
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1294
effective length of database: 7,941,110
effective search space: 10275796340
effective search space used: 10275796340
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U15884-1 (Contig-U15884-1Q) /CSM_Contig/Contig-U15884-1Q.Seq.d
         (1310 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ377051) Dictyostelium discoideum cDNA clone:ddc22m10, 3' ...  1267   0.0    1
(BJ377680) Dictyostelium discoideum cDNA clone:ddc25k11, 3' ...  1259   0.0    1
(BJ436084) Dictyostelium discoideum cDNA clone:ddv29j23, 3' ...  1223   0.0    1
(BJ435378) Dictyostelium discoideum cDNA clone:ddv26o19, 3' ...  1122   0.0    1
(BJ375142) Dictyostelium discoideum cDNA clone:ddc17h16, 3' ...  1104   0.0    2
(BJ398199) Dictyostelium discoideum cDNA clone:dds11n09, 3' ...   741   0.0    1
(AU036913) Dictyostelium discoideum slug cDNA, clone SSB802.      492   e-136  2
(BJ416603) Dictyostelium discoideum cDNA clone:ddv26o19, 5' ...   466   e-133  2
(BJ413429) Dictyostelium discoideum cDNA clone:ddv15e15, 5' ...   317   3e-97  2
(AU071560) Dictyostelium discoideum slug cDNA, clone SSB802.      204   6e-48  1
(BJ417216) Dictyostelium discoideum cDNA clone:ddv29j23, 5' ...    78   9e-10  1
(BJ363165) Dictyostelium discoideum cDNA clone:ddc25k11, 5' ...    54   0.014  1
(BX324224) Zebrafish DNA sequence from clone CH211-168H21 in...    44   0.16   4
(EI155774) DH019M14_F8.ab1 Brachypodium distachyon Bd21 Hind...    50   0.21   1
(DT415966) JGI_CABI13293.fwd NIH_XGC_tropOvi1 Xenopus (Silur...    38   0.27   2
(DR862602) JGI_CABG6937.fwd NIH_XGC_tropSto1 Xenopus (Silura...    38   0.27   2
(CX365749) JGI_XZT26047.fwd NIH_XGC_tropTad5 Xenopus (Silura...    38   0.28   2
(DN085068) JGI_CABE507.fwd NIH_XGC_tropOva1 Xenopus (Siluran...    38   0.28   2
(DR859275) JGI_CABG4363.fwd NIH_XGC_tropSto1 Xenopus (Silura...    38   0.29   2
(DN080300) JGI_CABD12377.fwd NIH_XGC_tropLun1 Xenopus (Silur...    38   0.29   2
(AC208397) Macaca mulatta chromosome 1 clone CH250-347K17, W...    34   0.47   2
(FI088773) CHO_OF7172xf14r1.ab1 CHO_OF7 Nicotiana tabacum ge...    48   0.84   1
(CV521165) 0089P0055Z_F04_T7 Mimulus guttatus library 2 Mimu...    48   0.84   1
(BC166338) Xenopus tropicalis caspase 3, apoptosis-related c...    38   0.97   2
(GE888130) 1112934372806 BABEVCEREB-C-01-1-7KB Papio anubis ...    36   2.3    2
(AL870927) Xenopus tropicalis EST, clone TEgg107b19 5'.            38   2.8    2
(AP010540) Lotus japonicus genomic DNA, chromosome 5, clone:...    46   3.3    1
(AP010538) Lotus japonicus genomic DNA, chromosome 5, clone:...    46   3.3    1
(AM462901) Vitis vinifera contig VV78X149785.4, whole genome...    46   3.3    1
(AC147365) Medicago truncatula clone mth2-10f9, complete seq...    46   3.3    1
(AX346061) Sequence 1132 from Patent WO0200928.                    46   3.3    1
(AL596223) Human DNA sequence from clone RP11-227H15 on chro...    46   3.3    1
(AC160788) Bos taurus clone CH240-95I4, WORKING DRAFT SEQUEN...    46   3.3    1
(AC023516) Homo sapiens clone RP11-115O4, LOW-PASS SEQUENCE ...    46   3.3    1
(ER451973) 1092963853368 Global-Ocean-Sampling_GS-35-01-01-1...    46   3.3    1
(DU332965) 1098312050549 CHORI-243 Ovis aries genomic clone ...    46   3.3    1
(DU328025) 1098473620464 CHORI-243 Ovis aries genomic clone ...    46   3.3    1
(BE161643) MR3-HT0446-260300-201-a12 HT0446 Homo sapiens cDN...    46   3.3    1
(BE161642) MR3-HT0446-260300-201-a11 HT0446 Homo sapiens cDN...    46   3.3    1
(EX529849) MTGland_A059_2007-06-22/MTGlandA059_F09_035_1 Med...    46   3.3    1
(CT009603) Zebrafish DNA sequence from clone CH73-346N20 in ...    40   4.0    2
(CP000994) Borrelia recurrentis A1 plasmid pl124, complete s...    34   5.1    8
(AF403072) Gossypium longicalyx microsomal omega6 desaturase...    34   8.1    2
(GE852035) 1112869923437 BABEVCEREB-C-01-1-7KB Papio anubis ...    32   8.4    2

>(BJ377051) Dictyostelium discoideum cDNA clone:ddc22m10, 3' end,
            single read.
          Length = 664

 Score = 1267 bits (639), Expect = 0.0
 Identities = 642/643 (99%)
 Strand = Plus / Minus


Query: 506  ttacatttcaaaattattaccatcaactcaaccaacttcaaaatcctcaaccactgttta 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664  ttacatttcaaaattattaccatcaactcaaccaacttcaaaatcctcaaccactgttta 605


Query: 566  tgagaaatttaagatttcaatgtcaaaagcaacaataccattctcaattatgattgcact 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604  tgagaaatttaagatttcaatgtcaaaagcaacaataccattctcaattatgattgcact 545


Query: 626  tgtactctatttaattgaatctaaatttccatggcaagttgatagtggtgtatcaaagag 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544  tgtactctatttaattgaatctaaatttccatggcaagttgatagtggtgtatcaaagag 485


Query: 686  tatctcaatatttggttctatcagtgagagtaaagtttggtcaccttatgttgctggtat 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484  tatctcaatatttggttctatcagtgagagtaaagtttggtcaccttatgttgctggtat 425


Query: 746  cactattggcttattacaaatcccaagtttcttgatttcaaatacgggtttaggttgtag 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424  cactattggcttattacaaatcccaagtttcttgatttcaaatacgggtttaggttgtag 365


Query: 806  ttctgcatatgttacagttggctcaaaagtttgtaatgccgttagttgtaccgtagatta 865
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 364  ttctgcatatgttacagttggctcaaaagtttgtaatgccgttggttgtaccgtagatta 305


Query: 866  ctttaaaagttttaatacaaccgttcgttcaatttatggtccactattaaatttaggtat 925
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304  ctttaaaagttttaatacaaccgttcgttcaatttatggtccactattaaatttaggtat 245


Query: 926  cattggtggtgcttatttggcttctcgttcaaatcctgctcctttaattgaacaactcaa 985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244  cattggtggtgcttatttggcttctcgttcaaatcctgctcctttaattgaacaactcaa 185


Query: 986  taatcaatcaactctaaatcactttttaggtggttttgttttattatttggtgctcgtct 1045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184  taatcaatcaactctaaatcactttttaggtggttttgttttattatttggtgctcgtct 125


Query: 1046 taatggtggatgtacttcaaatggtttaacctcgatgggtaaattagaatttagtagttt 1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124  taatggtggatgtacttcaaatggtttaacctcgatgggtaaattagaatttagtagttt 65


Query: 1106 cgttacaatggcctcaatgtttgctggaggtgttttaacctct 1148
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64   cgttacaatggcctcaatgtttgctggaggtgttttaacctct 22

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,247,832,721
Number of extensions: 74306753
Number of successful extensions: 5933273
Number of sequences better than 10.0: 44
Length of query: 1310
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1286
Effective length of database: 96,409,374,237
Effective search space: 123982455268782
Effective search space used: 123982455268782
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U15884-1 (Contig-U15884-1Q) /CSM_Contig/Contig-U15884-1Q.Seq.d
         (1310 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000250_4283(CP000250|pid:none) Rhodopseudomonas palustris HaA2...    99   4e-19
CP000780_618(CP000780|pid:none) Candidatus Methanoregula boonei ...    82   3e-14
CP000250_4284(CP000250|pid:none) Rhodopseudomonas palustris HaA2...    76   2e-12
AP010904_609(AP010904|pid:none) Desulfovibrio magneticus RS-1 DN...    64   1e-08
CP001197_173(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy...    63   2e-08
CP001100_2224(CP001100|pid:none) Chloroherpeton thalassium ATCC ...    62   6e-08
CP000252_2922(CP000252|pid:none) Syntrophus aciditrophicus SB, c...    61   8e-08
AE017180_2299(AE017180|pid:none) Geobacter sulfurreducens PCA, c...    60   2e-07
CP000142_3037(CP000142|pid:none) Pelobacter carbinolicus DSM 238...    60   2e-07
CU633897_236(CU633897|pid:none) Podospora anserina genomic DNA c...    60   2e-07
AE015929_1646(AE015929|pid:none) Staphylococcus epidermidis ATCC...    57   2e-06
AP008934_834(AP008934|pid:none) Staphylococcus saprophyticus sub...    57   2e-06
CP000478_508(CP000478|pid:none) Syntrophobacter fumaroxidans MPO...    57   2e-06
AM295250_1541(AM295250|pid:none) Staphylococcus carnosus subsp. ...    56   3e-06
CU928162_2312(CU928162|pid:none) Escherichia coli ED1a chromosom...    55   4e-06
CP000800_2195(CP000800|pid:none) Escherichia coli E24377A, compl...    55   6e-06
AP006716_987(AP006716|pid:none) Staphylococcus haemolyticus JCSC...    55   6e-06
AP006840_2221(AP006840|pid:none) Symbiobacterium thermophilum IA...    55   6e-06
AE005174_2838(AE005174|pid:none) Escherichia coli O157:H7 EDL933...    55   6e-06
AB453015_16(AB453015|pid:none) Escherichia coli O55:H7 DNA, O55-...    55   7e-06
CP000946_1597(CP000946|pid:none) Escherichia coli ATCC 8739, com...    54   1e-05
CU928164_999(CU928164|pid:none) Escherichia coli IAI39 chromosom...    54   1e-05
CP000802_2038(CP000802|pid:none) Escherichia coli HS, complete g...    54   1e-05
AP009240_2286(AP009240|pid:none) Escherichia coli SE11 DNA, comp...    54   1e-05
CU928145_2230(CU928145|pid:none) Escherichia coli 55989 chromoso...    54   1e-05
AP009324_2031(AP009324|pid:none) Staphylococcus aureus subsp. au...    54   1e-05
CU928158_2013(CU928158|pid:none) Escherichia fergusonii ATCC 354...    54   1e-05
BA000018_1915(BA000018|pid:none) Staphylococcus aureus subsp. au...    54   1e-05
AP009351_1962(AP009351|pid:none) Staphylococcus aureus subsp. au...    54   1e-05
AM746676_5620(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    53   2e-05
(P33015) RecName: Full=UPF0394 inner membrane protein yeeE;  &AP...    53   2e-05
CP000031_2579(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple...    53   3e-05
CP000769_2577(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c...    53   3e-05
CP000769_4066(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c...    53   3e-05
BX571856_2085(BX571856|pid:none) Staphylococcus aureus subsp. au...    53   3e-05
CP000970_1009(CP000970|pid:none) Escherichia coli SMS-3-5, compl...    52   5e-05
CP001131_2698(CP001131|pid:none) Anaeromyxobacter sp. K, complet...    52   6e-05
CP000109_170(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ...    51   1e-04
CP000780_619(CP000780|pid:none) Candidatus Methanoregula boonei ...    50   2e-04
CP000254_773(CP000254|pid:none) Methanospirillum hungatei JF-1, ...    50   2e-04
CP001359_2787(CP001359|pid:none) Anaeromyxobacter dehalogenans 2...    50   2e-04
CP000082_1255(CP000082|pid:none) Psychrobacter arcticus 273-4, c...    49   3e-04
CP000251_2622(CP000251|pid:none) Anaeromyxobacter dehalogenans 2...    48   7e-04
CP000685_4843(CP000685|pid:none) Flavobacterium johnsoniae UW101...    48   7e-04
CP001628_2168(CP001628|pid:none) Micrococcus luteus NCTC 2665, c...    47   0.002
AP009484_379(AP009484|pid:none) Macrococcus caseolyticus JCSC540...    47   0.002
BA000035_2724(BA000035|pid:none) Corynebacterium efficiens YS-31...    46   0.003
CP001132_54(CP001132|pid:none) Acidithiobacillus ferrooxidans AT...    46   0.003
CP001219_52(CP001219|pid:none) Acidithiobacillus ferrooxidans AT...    46   0.003
AP007255_857(AP007255|pid:none) Magnetospirillum magneticum AMB-...    45   0.004
CU234118_3015(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl...    45   0.004
AP006840_2297(AP006840|pid:none) Symbiobacterium thermophilum IA...    45   0.006
CP000383_1011(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334...    45   0.006
AM942444_176(AM942444|pid:none) Corynebacterium urealyticum DSM ...    45   0.006
CP000768_1728(CP000768|pid:none) Campylobacter jejuni subsp. doy...    45   0.006
CP000561_1457(CP000561|pid:none) Pyrobaculum calidifontis JCM 11...    45   0.006
CP000142_3038(CP000142|pid:none) Pelobacter carbinolicus DSM 238...    45   0.008
AP006840_2222(AP006840|pid:none) Symbiobacterium thermophilum IA...    44   0.013
AL646052_739(AL646052|pid:none) Ralstonia solanacearum GMI1000 c...    44   0.017
CP000453_1654(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-...    44   0.017
CP000312_691(CP000312|pid:none) Clostridium perfringens SM101, c...    44   0.017
BA000016_735(BA000016|pid:none) Clostridium perfringens str. 13 ...    44   0.017
CP000923_46(CP000923|pid:none) Thermoanaerobacter sp. X514, comp...    43   0.022
BA000040_3523(BA000040|pid:none) Bradyrhizobium japonicum USDA 1...    43   0.029
CP001083_1597(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    42   0.037
CP000962_1655(CP000962|pid:none) Clostridium botulinum A3 str. L...    42   0.037
CP000939_1587(CP000939|pid:none) Clostridium botulinum B1 str. O...    42   0.037
CP001581_1690(CP001581|pid:none) Clostridium botulinum A2 str. K...    42   0.037
(Q7WA16) RecName: Full=Uncharacterized transporter BPP1579;  &BX...    42   0.037
CP000358_323(CP000358|pid:none) Deinococcus geothermalis DSM 113...    42   0.037
BA000028_3144(BA000028|pid:none) Oceanobacillus iheyensis HTE831...    42   0.037
(Q7WJ43) RecName: Full=Uncharacterized transporter BB2657;  &BX6...    42   0.037
CP001068_672(CP001068|pid:none) Ralstonia pickettii 12J chromoso...    42   0.049
BA000011_470(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,...    42   0.049
CP001083_1601(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    42   0.049
CP001339_2199(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ...    42   0.049
CP000853_1006(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,...    42   0.049
CP000252_2921(CP000252|pid:none) Syntrophus aciditrophicus SB, c...    42   0.064
AM420293_2474(AM420293|pid:none) Saccharopolyspora erythraea NRR...    42   0.064
CP000728_1555(CP000728|pid:none) Clostridium botulinum F str. La...    42   0.064
AM420293_1743(AM420293|pid:none) Saccharopolyspora erythraea NRR...    41   0.083
CP001089_2938(CP001089|pid:none) Geobacter lovleyi SZ, complete ...    41   0.11
AL445065_32(AL445065|pid:none) Thermoplasma acidophilum complete...    41   0.11
AM412317_1566(AM412317|pid:none) Clostridium botulinum A str. AT...    40   0.14
AE001825_161(AE001825|pid:none) Deinococcus radiodurans R1 chrom...    40   0.19
CP001581_1686(CP001581|pid:none) Clostridium botulinum A2 str. K...    40   0.19
AE004091_5426(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co...    40   0.24
CP000438_5750(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA...    40   0.24
CP000863_1988(CP000863|pid:none) Acinetobacter baumannii ACICU, ...    40   0.24
CP000361_2233(CP000361|pid:none) Arcobacter butzleri RM4018, com...    39   0.32
CP000682_1140(CP000682|pid:none) Metallosphaera sedula DSM 5348,...    39   0.32
CP000653_2249(CP000653|pid:none) Enterobacter sp. 638, complete ...    39   0.41
CP000521_2071(CP000521|pid:none) Acinetobacter baumannii ATCC 17...    39   0.41
CP000123_511(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    39   0.54
CP000655_807(CP000655|pid:none) Polynucleobacter necessarius sub...    39   0.54
CP000569_2012(CP000569|pid:none) Actinobacillus pleuropneumoniae...    39   0.54
CP000267_1778(CP000267|pid:none) Rhodoferax ferrireducens T118, ...    39   0.54
CP001087_2402(CP001087|pid:none) Desulfobacterium autotrophicum ...    39   0.54
DQ680240_1(DQ680240|pid:none) Mannheimia haemolytica strain A1 h...    38   0.71
AE017125_1298(AE017125|pid:none) Helicobacter hepaticus ATCC 514...    38   0.92
AB082122_2(AB082122|pid:none) Vibrio parahaemolyticus ferric vib...    38   0.92
CU234118_3013(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl...    38   0.92
CP001089_1153(CP001089|pid:none) Geobacter lovleyi SZ, complete ...    37   1.2
CP000246_706(CP000246|pid:none) Clostridium perfringens ATCC 131...    37   1.2
CP001091_2065(CP001091|pid:none) Actinobacillus pleuropneumoniae...    37   1.2
CP001344_2611(CP001344|pid:none) Cyanothece sp. PCC 7425, comple...    37   1.6
CP000926_2293(CP000926|pid:none) Pseudomonas putida GB-1, comple...    37   1.6
AE017226_151(AE017226|pid:none) Treponema denticola ATCC 35405, ...    37   1.6
CP000141_610(CP000141|pid:none) Carboxydothermus hydrogenoforman...    37   1.6
AE005674_1972(AE005674|pid:none) Shigella flexneri 2a str. 301, ...    37   2.1
CU928163_2187(CU928163|pid:none) Escherichia coli UMN026 chromos...    37   2.1
CP000243_2093(CP000243|pid:none) Escherichia coli UTI89, complet...    37   2.1
CP000802_1933(CP000802|pid:none) Escherichia coli HS, complete g...    37   2.1
AP009240_2160(AP009240|pid:none) Escherichia coli SE11 DNA, comp...    37   2.1
CP000058_4902(CP000058|pid:none) Pseudomonas syringae pv. phaseo...    37   2.1
(P31064) RecName: Full=UPF0394 inner membrane protein yedE;  &AP...    37   2.1
AE005174_2710(AE005174|pid:none) Escherichia coli O157:H7 EDL933...    37   2.1
AE014075_2279(AE014075|pid:none) Escherichia coli CFT073, comple...    37   2.1
AE017220_1969(AE017220|pid:none) Salmonella enterica subsp. ente...    36   2.7
CP001113_2001(CP001113|pid:none) Salmonella enterica subsp. ente...    36   2.7
BA000040_3521(BA000040|pid:none) Bradyrhizobium japonicum USDA 1...    36   2.7
DQ201184_9(DQ201184|pid:none) Vibrio alginolyticus vibrioferrin ...    36   2.7
CP001138_1080(CP001138|pid:none) Salmonella enterica subsp. ente...    36   2.7
AM933173_1065(AM933173|pid:none) Salmonella enterica subsp. ente...    36   2.7
AM933172_1038(AM933172|pid:none) Salmonella enterica subsp. ente...    36   2.7
CP001280_1876(CP001280|pid:none) Methylocella silvestris BL2, co...    36   2.7
CP000857_1698(CP000857|pid:none) Salmonella enterica subsp. ente...    36   2.7
CP001503_1738(CP001503|pid:none) Burkholderia glumae BGR1 chromo...    36   3.5
AM942759_41(AM942759|pid:none) Proteus mirabilis strain HI4320, ...    36   3.5
CR378677_310(CR378677|pid:none) Photobacterium profundum SS9 chr...    36   3.5
CP000089_2791(CP000089|pid:none) Dechloromonas aromatica RCB, co...    36   3.5
CP000740_763(CP000740|pid:none) Sinorhizobium medicae WSM419 pla...    36   3.5
CP000304_819(CP000304|pid:none) Pseudomonas stutzeri A1501, comp...    36   3.5
CP000026_846(CP000026|pid:none) Salmonella enterica subsp. enter...    35   4.6
(Q06400) RecName: Full=UPF0394 inner membrane protein yedE;  &L1...    35   4.6
CP000494_3456(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl...    35   4.6
CP000822_976(CP000822|pid:none) Citrobacter koseri ATCC BAA-895,...    35   4.6
CP001197_174(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy...    35   4.6
AE006468_1913(AE006468|pid:none) Salmonella enterica subsp. ente...    35   4.6
AE015451_3573(AE015451|pid:none) Pseudomonas putida KT2440 compl...    35   6.0
CP000084_1238(CP000084|pid:none) Candidatus Pelagibacter ubique ...    35   6.0
CR522870_1922(CR522870|pid:none) Desulfotalea psychrophila LSv54...    35   7.8
CP000376_607(CP000376|pid:none) Silicibacter sp. TM1040 mega pla...    35   7.8
CP000949_2809(CP000949|pid:none) Pseudomonas putida W619, comple...    35   7.8
AM746676_2295(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    35   7.8
CP000633_1158(CP000633|pid:none) Agrobacterium vitis S4 chromoso...    35   7.8
CP001096_4896(CP001096|pid:none) Rhodopseudomonas palustris TIE-...    35   7.8
CP000463_3046(CP000463|pid:none) Rhodopseudomonas palustris BisA...    35   7.8

>CP000250_4283(CP000250|pid:none) Rhodopseudomonas palustris HaA2,
            complete genome.
          Length = 174

 Score = 98.6 bits (244), Expect = 4e-19
 Identities = 61/160 (38%), Positives = 97/160 (60%), Gaps = 16/160 (10%)
 Frame = +3

Query: 717  KVWSPYVAGITIGLLQIPSFLISNTGLGCSSAYVTVGSKVCNAVSCTVDYFK----SFNT 884
            K WSPYVAG+ IGLLQIP+FL+  T LG SS++VTVG  + + +  ++   K
Sbjct: 8    KAWSPYVAGVVIGLLQIPAFLMIQTALGASSSFVTVGDALASWIDPSLLQIKYAASHVAP 67

Query: 885  TVRSIYGPLLNLGIIGGAYL------ASRSNPAPLIEQL--NNQSTLNH---FLGGFVLL 1031
            T ++++   L  GI  GA+L      A R   +P+  +   ++ +TL +   F+ GF++L
Sbjct: 68   TAKNLWQVALVGGIAIGAFLSMKLSGARRQPISPIWSRALGSSSATLRYAVAFVAGFLML 127

Query: 1032 FGARLNGGCTS-NGLTSMGKLEFSSFVTMASMFAGGVLTS 1148
            FGAR+  GCTS +G++ + +L   S V +A+MF GG++T+
Sbjct: 128  FGARIADGCTSGHGVSGVAQLSVGSTVAVAAMFVGGIVTA 167

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,536,346,942
Number of extensions: 25706044
Number of successful extensions: 75575
Number of sequences better than 10.0: 148
Number of HSP's gapped: 75462
Number of HSP's successfully gapped: 149
Length of query: 436
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 304
Effective length of database: 623,955,076
Effective search space: 189682343104
Effective search space used: 189682343104
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.40  gvh: 0.41  alm: 0.29  top: 0.40  tms: 0.07  mit: 0.26  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.03  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 32.0 %: mitochondrial
	 28.0 %: nuclear
	 12.0 %: cytoplasmic
	 12.0 %: Golgi
	  8.0 %: endoplasmic reticulum
	  4.0 %: vacuolar
	  4.0 %: peroxisomal

>> prediction for Contig-U15884-1 is mit