>Contig-U15851-1 (Contig-U15851-1Q) /CSM_Contig/Contig-U15851-1Q.Seq.d
AATGGTTCAAAAAGAATTGGAGCTACAAATTAAACAAATTGGTTCAGATA
ATTTCACTCATAAGTTTAAGAAATTCACTTCTTCAAAAGCTGAACATCTC
GATAGTTTACAAATATTTATCAAACAAGTTGAAGAAACTTATCAATCAAC
AATAGCTTACTTTTGTGAAGAAAACATTCAACCAGAAGAATTCTTTCAAA
TTATTTTCAATTTCATTAATTTGGTATTGAAAGTTCATAAAGAGAATGAA
GATATTAGAATTGCTGCATTACCAAAATCAAAGAAATATCAAGAACAACA
AAATAAACCAACTCAAAATAATGATCATAGTACTAAATCAAAATTATCAA
ATTTACCATCTTCAAGTAGTATTAATGATGAAAGTTCTTCATCGGCATCA
TTGTCATCATTATCAACTAATGTTAATGCCAATACTGAAAATGATAATTT
GGAATTATCAAAACTTGGTTTCTTATCAAAATTAAGAAAAAAGAGATCAA
AATCAGAACAAGAACCTGTGGTGGAGCCAATTCAAATCACTCCAAAAGGT
TGGATCAGCTGCATCTGCAGAACCTTCACCATCCATAAAGAGTAGAGATA
AGAAAGAATCATTTAAGTCTCCAATTTTCAGATCTCCAAAATTCAAGGTA
TCTTCAATTTCACCAAAATTAAAAGCAACTTTAAATTCAATATCAAAAAC
TTTAAGAAAACAACAAGTAGAATCACCATCACCAAATATGTCACCATTTA
CTTCAACTGCAATTAGTGAAAAAGCTTCAATTTATGATAAAAATATTAAT
AATATTCAACCATCATCATCATCATCATCATCATCATCATCATCATCATC
ATCATCAACAATAACTGGAAAGAAATCACACAATACTGAATCTGAAATAA
AGAAAGAATTTATCTCAAATTCATCAATGGATAAAGATAAAGAAAAAATC
AAAGAAAAAGAAAAAGGAACAATATCAAAAGGAAAAGCTCTATTATTTGG
TCATTCAAGATCAAAATCAACAACAACATCTCCATCTTCATCATCATCAA
AGAAACAAATCCCATCATTATCAGAATGTTTACAAGAATCTAATAAAACC
CATTCAAGATCATCATCATATTCTCCAAATAGTAAGGTTAATTCACAATT
AATGTCAAATCCTTTTATTATGATGGAACAAAAACAACCAAAAGATTCTT
TACCAATTGCAAAAGATTCAAAAGAAATCCATAATATGGGAACAACAACA
ACAACAACACCAATTAAAGTTGAAAAAATTGTTTCAGTAAATGAAAAACC
AACTATAGTTACAATGCAAACTAAACCTATACCTTTAGTTCCAACAACTA
CAACCTCAACAACTACAACTACACAAACAACACCACCACCAGTAACAATA
AATGAAAAAGAAAAAGA----------AAATAATGGATGATCAATTAATT
GATAGAAGTTATTTTACAACACTTTATAAACAAATTAGATTACAAGAGTT
TCTAGAGGTGGCACATACCATTCTTCAAGATCGTTTAGAGAATGGATTTG
GAAAAACAGTTAAAGGTGTACCGTTAGGTTGTTTACCAGTAGAATTGTTT
AGAGAGCATTTCTCTACCTTTAGATATTGGAGAAGCTATACCAAAGAGCG
TCCAGCCTTTATTAATAATGAAAAAGTTATGGTACAACATTATACTTTAC
TTTTAATGCTAGATCTGGTTTTCCAACACTTTCAAGTGGTAAAGAATGGG
TTAAAAAAAAGGTTGAGAAAAAGGATTCAAACAATCCTGCAGACGTCGCC
ATACATGAATATCAAAAAGTTACATTCATCATTTCAATCAGAGATACCAG
AGTAGAATGTGACTTCAAAATGGCTACAAATACACCAGGAAGTGAACAAG
CACAACAACAACAACAACAACAACAACAACAACAATTGGGTGATATACCA
ATAAAACAACAAATTACCTCTTCAAATAATAGTGGTAACTCACAACAACA
ACAACAACAATCCAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AAAATAGGCAACTATCGAATTTATCTACTGATTTTGAAAGGGATTTAGTA
ATTNTAGATGGTGAAGAGTTAGAATCAATGGAAAGAGTATTTAATAGAGC
AGTTGCAATTGCAGAATTGGGTGATCTCAGACAATGAACCATTGGAATGT
GTACCATTGTATATTCTCGCATTAAAATTAATGAAATCGAAAATACCAAA
TGATCCATCAAGTTCACCTGATAAATTTATAAATACCTTTACTGAATATA
AAAGAAAGTTAGTTCATATATTTTCAACTTCAAATACCTCTGTAAAAAAT
CAAGACCACCACTCTTCATTCTCTCCAAATCGTTTTATCTATGAAAATGC
TTTGGAGTTTGGAAAAAAGGGAGCAGTCGAAGAATTGTATAATAATTACC
CAACATCACTTCAGTTTTATACTGATGGTACTCTTTTGTTAGAATATCTT
TCATCTATCGTAATTGATTCTGATGACCAAGAGATCATTAAGAAATATTT
AAATGCATTTGAAGTGAGAACTCAAATTTGTAAAAAAAATTATGAAAATA
GCAAAAATACAGTTTTGAATACCAATAGTATTCAAAATAATACATAATCA
TAAAAAATATTTAAAAACAACA

est1=CFH513F,-13,574
est2=CHR667Z,167,947
est3=CHJ159Z,276,880
est4=SLA612Z,311,948
est5=CHI165Z,702,1317
est6=SHF416F,828,1415
est7=CFE288F,1418,2106
est8=CFH513Z,1418,2080
est9=SLA616Z,1609,2199
est10=SSH386E,1628,2361
est11=AHP265Z,1726,2204
est12=SLD371Z,1738,2221
est13=CHK408F,1810,2324
est14=CHF542F,1824,2230
est15=VSE847Z,1878,2047
est16=VSJ871Z,1917,2268
est17=VSI268E,1956,2712
est18=SLG781F,1980,2298
est19=SHL431Z,1983,2186
est20=SHB420Z,2042,2184

wfkknwsyklnklvqiislislrnsllqklnisivykylsnklkklinqq*ltfvkktfn
qknsfklfsisliwy*kfikrmkilellhyqnqrniknnkinqlkimiivlnqnyqiyhl
qvvlmmkvlhrhhchhyqlmlmpilkmiiwnyqnlvsyqn*EKRDQNQNKNLWWSQFKSL
QKVGSAASAEPSPSIKSRDKKESFKSPIFRSPKFKVSSISPKLKATLNSISKTLRKQQVE
SPSPNMSPFTSTAISEKASIYDKNINNIQPSSSSSSSSSSSSSSSTITGKKSHNTESEIK
KEFISNSSMDKDKEKIKEKEKGTISKGKALLFGHSRSKSTTTSPSSSSSKKQIPSLSECL
QESNKTHSRSSSYSPNSKVNSQLMSNPFIMMEQKQPKDSLPIAKDSKEIHNMGTTTTTTP
IKVEKIVSVNEKPTIVTMQTKPIPLVPTTTTSTTTTTQTTPPPVTINEKEK---

---IMDDQLIDRSYFTTLYKQIRLQEFLEVAHTILQDRLENGFGKTVKGVPLGCLPVELF
REHFSTFRYWRSYTKERPAFINNEKVMVQHYTLLLMLDLVFQHFQVVKNGLKKRLRKRIQ
TILQTSPYMNIKKLHSSFQSEIPE*nvtskwlqihqevnkhnnnnnnnnnnnwviyq*nn
klplqiivvthnnnnnnptttttttttttttttttttttttttttttk*atiefiy*f*k
gfsnxrw*rvringksi**sscncrig*sqtmnhwnvyhcifsh*n**nrkyqmihqvhl
inl*ipllnikes*fiyfqlqipl*kiktttlhslqivlsmkmlwslekreqsknciiit
qhhfsfilmvlfc*nifhls*lilmtkrslrni*mhlk*elkfvkkimkiakiqf*ipiv
fkiihnhkkylktt

Frame A:
ngskrigatn*tnwfr*fhs*v*eihffks*tsr*ftniyqts*rnlsinnslll*rkhs
trrilsnyfqfh*fgiess*re*ry*nccitkikeisrttk*tnsk**s*y*ikiikfti
fk*y***kffigiiviiin*c*cqy*k**fgiiktwflikikkkeikirtrtcggansnh
skrldqlhlqnlhhp*rveirknhlslqfsdlqnsrylqfhqn*kql*iqyqkl*ennk*
nhhhqichhllqlqlvkklqfmikiliifnhhhhhhhhhhhhhhhqq*lernhtilnlk*
rknlsqihqwikikkkskkkkkeqyqkeklyylviqdqnqqqhlhlhhhqrnkshhyqnv
yknlikpiqdhhhilqivrlihn*cqilll*wnknnqkilyqlqkiqkksiiweqqqqqh
qlklkklfq*mknql*lqcklnlyl*fqqlqpqqlqlhkqhhhq*q*mkkkk---

---k*wmin*lievilqhfinkldyksf*rwhipffkiv*rmdlekqlkvyr*vvyq*nc
lesislpldigeaipksvqpllimkklwyniilyf*c*iwfsntfkw*rmg*kkg*ekgf
kqscrrrht*isksyihhfnqryqsrm*lqngykytrk*tstttttttttttig*ytnkt
tnylfk**w*lttttttiqqqqqqqqqqqqqqqqqqqqqqqqqqqqqqnrqlsnlstdfe
rdlvixdgeelesmervfnravaiaelgdlrq*tigmctivysrikineientk*sikft
**iykyly*i*kkvssyifnfkylckksrpplfilsksfyl*kcfgvwkkgssrriv**l
pnitsvly*wysfvrisfiyrn*f**prdh*eifkci*sensnl*kkl*k*qkysfeyq*
ysk*yiiikni*kq

Frame B:
mvqkelelqikqigsdnfthkfkkftsskaehldslqifikqveetyqstiayfceeniq
peeffqiifnfinlvlkvhkenediriaalpkskkyqeqqnkptqnndhstksklsnlps
sssindessssaslsslstnvnantendnlelsklgflsklrkkrskseqepvvepiqit
pkgwiscicrtftihke*r*erii*vsnfqiskiqgifnftkiksnfkfniknfkkttsr
ititkyvtiyfncn**ksfnl**ky**ystiiiiiiiiiiiiiiinnnwkeitqy*i*nk
eriylkfing*r*rknqrkrkrnnikrkssiiwsfkikinnnisifiiiketnpiiirmf
tri**npfkiiiifsk**g*ftinvksfyydgtkttkrfftnckrfkrnp*ygnnnnnnt
n*s*kncfsk*ktnysynan*tytfssnnynlnnynytnntttsnnk*krkr---

---nng*sin**klfyntl*tn*itrvsrggtyhssrsfrewiwkns*rctvrlftsriv
*raflyl*ileklyqrassly***ksygttlyftfnarsgfptlssgkewvkkkvekkds
nnpadvaiheyqkvtfiisirdtrvecdfkmatntpgseqaqqqqqqqqqqqlgdipikq
qitssnnsgnsqqqqqqsnnnnnnnnnnnnnnnnnnnnnnnnnnnnnkignyriyllilk
gi**x*mvks*nqwkeylieqlqlqnwvisdneplecvplyilalklmkskipndpsssp
dkfintfteykrklvhifstsntsvknqdhhssfspnrfiyenalefgkkgaveelynny
ptslqfytdgtllleylssividsddqeiikkylnafevrtqickknyenskntvlntns
iqnnt*s*kifknn

Frame C:
wfkknwsyklnklvqiislislrnsllqklnisivykylsnklkklinqq*ltfvkktfn
qknsfklfsisliwy*kfikrmkilellhyqnqrniknnkinqlkimiivlnqnyqiyhl
qvvlmmkvlhrhhchhyqlmlmpilkmiiwnyqnlvsyqn*EKRDQNQNKNLWWSQFKSL
QKVGSAASAEPSPSIKSRDKKESFKSPIFRSPKFKVSSISPKLKATLNSISKTLRKQQVE
SPSPNMSPFTSTAISEKASIYDKNINNIQPSSSSSSSSSSSSSSSTITGKKSHNTESEIK
KEFISNSSMDKDKEKIKEKEKGTISKGKALLFGHSRSKSTTTSPSSSSSKKQIPSLSECL
QESNKTHSRSSSYSPNSKVNSQLMSNPFIMMEQKQPKDSLPIAKDSKEIHNMGTTTTTTP
IKVEKIVSVNEKPTIVTMQTKPIPLVPTTTTSTTTTTQTTPPPVTINEKEK---

---IMDDQLIDRSYFTTLYKQIRLQEFLEVAHTILQDRLENGFGKTVKGVPLGCLPVELF
REHFSTFRYWRSYTKERPAFINNEKVMVQHYTLLLMLDLVFQHFQVVKNGLKKRLRKRIQ
TILQTSPYMNIKKLHSSFQSEIPE*nvtskwlqihqevnkhnnnnnnnnnnnwviyq*nn
klplqiivvthnnnnnnptttttttttttttttttttttttttttttk*atiefiy*f*k
gfsnxrw*rvringksi**sscncrig*sqtmnhwnvyhcifsh*n**nrkyqmihqvhl
inl*ipllnikes*fiyfqlqipl*kiktttlhslqivlsmkmlwslekreqsknciiit
qhhfsfilmvlfc*nifhls*lilmtkrslrni*mhlk*elkfvkkimkiakiqf*ipiv
fkiihnhkkylktt

Query= Contig-U15851-1 (Contig-U15851-1Q)
/CSM_Contig/Contig-U15851-1Q.Seq.d
         (2722 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15851-1 (Contig-U15851-1Q) /CSM_Contig/Conti...  1606  0.0
Contig-U15574-1 (Contig-U15574-1Q) /CSM_Contig/Conti...  1407  0.0
Contig-U13925-1 (Contig-U13925-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U11980-1 (Contig-U11980-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U16087-1 (Contig-U16087-1Q) /CSM_Contig/Conti...    40  0.018
Contig-U16068-1 (Contig-U16068-1Q) /CSM_Contig/Conti...    40  0.018
Contig-U13383-1 (Contig-U13383-1Q) /CSM_Contig/Conti...    40  0.018
Contig-U07546-1 (Contig-U07546-1Q) /CSM_Contig/Conti...    40  0.018
Contig-U16576-1 (Contig-U16576-1Q) /CSM_Contig/Conti...    38  0.070
Contig-U16203-1 (Contig-U16203-1Q) /CSM_Contig/Conti...    38  0.070

>Contig-U15851-1 (Contig-U15851-1Q) /CSM_Contig/Contig-U15851-1Q.Seq.d
          Length = 2722

 Score = 1606 bits (810), Expect = 0.0
 Identities = 810/810 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatggttcaaaaagaattggagctacaaattaaacaaattggttcagataatttcactca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatggttcaaaaagaattggagctacaaattaaacaaattggttcagataatttcactca 60

                                                                       
Query: 61  taagtttaagaaattcacttcttcaaaagctgaacatctcgatagtttacaaatatttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taagtttaagaaattcacttcttcaaaagctgaacatctcgatagtttacaaatatttat 120

                                                                       
Query: 121 caaacaagttgaagaaacttatcaatcaacaatagcttacttttgtgaagaaaacattca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaacaagttgaagaaacttatcaatcaacaatagcttacttttgtgaagaaaacattca 180

                                                                       
Query: 181 accagaagaattctttcaaattattttcaatttcattaatttggtattgaaagttcataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accagaagaattctttcaaattattttcaatttcattaatttggtattgaaagttcataa 240

                                                                       
Query: 241 agagaatgaagatattagaattgctgcattaccaaaatcaaagaaatatcaagaacaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagaatgaagatattagaattgctgcattaccaaaatcaaagaaatatcaagaacaaca 300

                                                                       
Query: 301 aaataaaccaactcaaaataatgatcatagtactaaatcaaaattatcaaatttaccatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaataaaccaactcaaaataatgatcatagtactaaatcaaaattatcaaatttaccatc 360

                                                                       
Query: 361 ttcaagtagtattaatgatgaaagttcttcatcggcatcattgtcatcattatcaactaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaagtagtattaatgatgaaagttcttcatcggcatcattgtcatcattatcaactaa 420

                                                                       
Query: 421 tgttaatgccaatactgaaaatgataatttggaattatcaaaacttggtttcttatcaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttaatgccaatactgaaaatgataatttggaattatcaaaacttggtttcttatcaaa 480

                                                                       
Query: 481 attaagaaaaaagagatcaaaatcagaacaagaacctgtggtggagccaattcaaatcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attaagaaaaaagagatcaaaatcagaacaagaacctgtggtggagccaattcaaatcac 540

                                                                       
Query: 541 tccaaaaggttggatcagctgcatctgcagaaccttcaccatccataaagagtagagata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccaaaaggttggatcagctgcatctgcagaaccttcaccatccataaagagtagagata 600

                                                                       
Query: 601 agaaagaatcatttaagtctccaattttcagatctccaaaattcaaggtatcttcaattt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaaagaatcatttaagtctccaattttcagatctccaaaattcaaggtatcttcaattt 660

                                                                       
Query: 661 caccaaaattaaaagcaactttaaattcaatatcaaaaactttaagaaaacaacaagtag 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caccaaaattaaaagcaactttaaattcaatatcaaaaactttaagaaaacaacaagtag 720

                                                                       
Query: 721 aatcaccatcaccaaatatgtcaccatttacttcaactgcaattagtgaaaaagcttcaa 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatcaccatcaccaaatatgtcaccatttacttcaactgcaattagtgaaaaagcttcaa 780

                                         
Query: 781 tttatgataaaaatattaataatattcaac 810
           ||||||||||||||||||||||||||||||
Sbjct: 781 tttatgataaaaatattaataatattcaac 810


 Score = 1176 bits (593), Expect = 0.0
 Identities = 612/620 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2103 aataggcaactatcgaatttatctactgattttgaaagggatttagtaattntagatggt 2162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 aataggcaactatcgaatttatctactgattttgaaagggatttagtaattntagatggt 2162

                                                                        
Query: 2163 gaagagttagaatcaatggaaagagtatttaatagagcagttgcaattgcagaattgggt 2222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 gaagagttagaatcaatggaaagagtatttaatagagcagttgcaattgcagaattgggt 2222

                                                                        
Query: 2223 gatctcagacaatgaaccattggaatgtgtaccattgtatattctcgcattaaaattaat 2282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 gatctcagacaatgaaccattggaatgtgtaccattgtatattctcgcattaaaattaat 2282

                                                                        
Query: 2283 gaaatcgaaaataccaaatgatccatcaagttcacctgataaatttataaatacctttac 2342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 gaaatcgaaaataccaaatgatccatcaagttcacctgataaatttataaatacctttac 2342

                                                                        
Query: 2343 tgaatataaaagaaagttagttcatatattttcaacttcaaatacctctgtaaaaaatca 2402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 tgaatataaaagaaagttagttcatatattttcaacttcaaatacctctgtaaaaaatca 2402

                                                                        
Query: 2403 agaccaccactcttcattctctccaaatcgttttatctatgaaaatgctttggagtttgg 2462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 agaccaccactcttcattctctccaaatcgttttatctatgaaaatgctttggagtttgg 2462

                                                                        
Query: 2463 aaaaaagggagcagtcgaagaattgtataataattacccaacatcacttcagttttatac 2522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2463 aaaaaagggagcagtcgaagaattgtataataattacccaacatcacttcagttttatac 2522

                                                                        
Query: 2523 tgatggtactcttttgttagaatatctttcatctatcgtaattgattctgatgaccaaga 2582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2523 tgatggtactcttttgttagaatatctttcatctatcgtaattgattctgatgaccaaga 2582

                                                                        
Query: 2583 gatcattaagaaatatttaaatgcatttgaagtgagaactcaaatttgtnnnnnnnntta 2642
            |||||||||||||||||||||||||||||||||||||||||||||||||        |||
Sbjct: 2583 gatcattaagaaatatttaaatgcatttgaagtgagaactcaaatttgtaaaaaaaatta 2642

                                                                        
Query: 2643 tgaaaatagcaaaaatacagttttgaataccaatagtattcaaaataatacataatcata 2702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 tgaaaatagcaaaaatacagttttgaataccaatagtattcaaaataatacataatcata 2702

                                
Query: 2703 aaaaatatttaaaaacaaca 2722
            ||||||||||||||||||||
Sbjct: 2703 aaaaatatttaaaaacaaca 2722


 Score =  908 bits (458), Expect = 0.0
 Identities = 504/512 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1383 ccaccaccagtaacaataaatgaaaaagaaaaagannnnnnnnnnaaataatggatgatc 1442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 ccaccaccagtaacaataaatgaaaaagaaaaagannnnnnnnnnaaataatggatgatc 1442

                                                                        
Query: 1443 aattaattgatagaagttattttacaacactttataaacaaattagattacaagagtttc 1502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 aattaattgatagaagttattttacaacactttataaacaaattagattacaagagtttc 1502

                                                                        
Query: 1503 tagaggtggcacataccattcttcaagatcgtttagagaatggatttggaaaaacagtta 1562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 tagaggtggcacataccattcttcaagatcgtttagagaatggatttggaaaaacagtta 1562

                                                                        
Query: 1563 aaggtgtaccgttaggttgtttaccagtagaattgtttagagagcatttctctaccttta 1622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 aaggtgtaccgttaggttgtttaccagtagaattgtttagagagcatttctctaccttta 1622

                                                                        
Query: 1623 gatattggagaagctataccaaagagcgtccagcctttattaataatgaaaaagttatgg 1682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 gatattggagaagctataccaaagagcgtccagcctttattaataatgaaaaagttatgg 1682

                                                                        
Query: 1683 tacaacattatactttacttttaatgctagatctggttttccaacactttcaagtggtaa 1742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 tacaacattatactttacttttaatgctagatctggttttccaacactttcaagtggtaa 1742

                                                                        
Query: 1743 agaatgggttnnnnnnnnggttgagaaaaaggattcaaacaatcctgcagacgtcgccat 1802
            ||||||||||        ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 agaatgggttaaaaaaaaggttgagaaaaaggattcaaacaatcctgcagacgtcgccat 1802

                                                                        
Query: 1803 acatgaatatcaaaaagttacattcatcatttcaatcagagataccagagtagaatgtga 1862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 acatgaatatcaaaaagttacattcatcatttcaatcagagataccagagtagaatgtga 1862

                                            
Query: 1863 cttcaaaatggctacaaatacaccaggaagtg 1894
            ||||||||||||||||||||||||||||||||
Sbjct: 1863 cttcaaaatggctacaaatacaccaggaagtg 1894


 Score =  545 bits (275), Expect = e-154
 Identities = 275/275 (100%)
 Strand = Plus / Plus

                                                                        
Query: 966  ggaacaatatcaaaaggaaaagctctattatttggtcattcaagatcaaaatcaacaaca 1025
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  ggaacaatatcaaaaggaaaagctctattatttggtcattcaagatcaaaatcaacaaca 1025

                                                                        
Query: 1026 acatctccatcttcatcatcatcaaagaaacaaatcccatcattatcagaatgtttacaa 1085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 acatctccatcttcatcatcatcaaagaaacaaatcccatcattatcagaatgtttacaa 1085

                                                                        
Query: 1086 gaatctaataaaacccattcaagatcatcatcatattctccaaatagtaaggttaattca 1145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 gaatctaataaaacccattcaagatcatcatcatattctccaaatagtaaggttaattca 1145

                                                                        
Query: 1146 caattaatgtcaaatccttttattatgatggaacaaaaacaaccaaaagattctttacca 1205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 caattaatgtcaaatccttttattatgatggaacaaaaacaaccaaaagattctttacca 1205

                                               
Query: 1206 attgcaaaagattcaaaagaaatccataatatggg 1240
            |||||||||||||||||||||||||||||||||||
Sbjct: 1206 attgcaaaagattcaaaagaaatccataatatggg 1240


 Score =  163 bits (82), Expect = 2e-39
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1260 ccaattaaagttgaaaaaattgtttcagtaaatgaaaaaccaactatagttacaatgcaa 1319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 ccaattaaagttgaaaaaattgtttcagtaaatgaaaaaccaactatagttacaatgcaa 1319

                                  
Query: 1320 actaaacctatacctttagttc 1341
            ||||||||||||||||||||||
Sbjct: 1320 actaaacctatacctttagttc 1341


 Score =  149 bits (75), Expect = 3e-35
 Identities = 75/75 (100%)
 Strand = Plus / Plus

                                                                       
Query: 858 acaataactggaaagaaatcacacaatactgaatctgaaataaagaaagaatttatctca 917
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 acaataactggaaagaaatcacacaatactgaatctgaaataaagaaagaatttatctca 917

                          
Query: 918 aattcatcaatggat 932
           |||||||||||||||
Sbjct: 918 aattcatcaatggat 932


 Score =  111 bits (56), Expect = 6e-24
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                    
Query: 1936 ttgggtgatataccaataaaacaacaaattacctcttcaaataatagtggtaactc 1991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 ttgggtgatataccaataaaacaacaaattacctcttcaaataatagtggtaactc 1991


 Score = 34.2 bits (17), Expect = 1.1
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                 
Query: 2275 aaattaatgaaatcgaaaata 2295
            ||||||||||||| |||||||
Sbjct: 222  aaattaatgaaattgaaaata 202


 Score = 34.2 bits (17), Expect = 1.1
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                 
Query: 202  tattttcaatttcattaattt 222
            ||||||| |||||||||||||
Sbjct: 2295 tattttcgatttcattaattt 2275


>Contig-U15574-1 (Contig-U15574-1Q) /CSM_Contig/Contig-U15574-1Q.Seq.d
          Length = 3233

 Score = 1407 bits (710), Expect = 0.0
 Identities = 719/721 (99%), Gaps = 1/721 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  ctgaacatctcgatagtttacaaatatttatcaaacaagttgaagaaacttatcaatcaa 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctgaacatctcgatagtttacaaatatttatcaaacaagttgaagaaacttatcaatcaa 256

                                                                       
Query: 150 caatagcttacttttgtgaagaaaacattcaaccagaagaattctttcaaattattttca 209
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cantagcttacttttgtgaagaaaacattcaaccagaagaattctttcaaattattttca 316

                                                                       
Query: 210 atttcattaatttggtattgaaagttcataaagagaatgaagatattagaattgctgcat 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atttcattaatttggtattgaaagttcataaagagaatgaagatattagaattgctgcat 376

                                                                       
Query: 270 taccaaaatcaaagaaatatcaagaacaacaaaataaaccaactcaaaataatgatcata 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 taccaaaatcaaagaaatatcaagaacaacaaaataaaccaactcaaaataatgatcata 436

                                                                       
Query: 330 gtactaaatcaaaattatcaaatttaccatcttcaagtagtattaatgatgaaagttctt 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtactaaatcaaaattatcaaatttaccatcttcaagtagtattaatgatgaaagttctt 496

                                                                       
Query: 390 catcggcatcattgtcatcattatcaactaatgttaatgccaatactgaaaatgataatt 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 catcggcatcattgtcatcattatcaactaatgttaatgccaatactgaaaatgataatt 556

                                                                       
Query: 450 tggaattatcaaaacttggtttcttatcaaaattaagaaaaaagagatcaaaatcagaac 509
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggaattatcaaaacttggtttcttatcaaaattaagaaaaaagagatcaaaatcagaac 616

                                                                       
Query: 510 aagaacctgtggtggagccaattcaaatcactccaaaaggttggatcagctgcatctgca 569
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 617 aagaacctgtggtggagccaattcaaatcactccaaaa-gttggatcagctgcatctgca 675

                                                                       
Query: 570 gaaccttcaccatccataaagagtagagataagaaagaatcatttaagtctccaattttc 629
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaaccttcaccatccataaagagtagagataagaaagaatcatttaagtctccaattttc 735

                                                                       
Query: 630 agatctccaaaattcaaggtatcttcaatttcaccaaaattaaaagcaactttaaattca 689
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 agatctccaaaattcaaggtatcttcaatttcaccaaaattaaaagcaactttaaattca 795

                                                                       
Query: 690 atatcaaaaactttaagaaaacaacaagtagaatcaccatcaccaaatatgtcaccattt 749
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 atatcaaaaactttaagaaaacaacaagtagaatcaccatcaccaaatatgtcaccattt 855

                                                                       
Query: 750 acttcaactgcaattagtgaaaaagcttcaatttatgataaaaatattaataatattcaa 809
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 acttcaactgcaattagtgaaaaagcttcaatttatgataaaaatattaataatattcaa 915

            
Query: 810 c 810
           |
Sbjct: 916 c 916


 Score = 34.2 bits (17), Expect = 1.1
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                 
Query: 2275 aaattaatgaaatcgaaaata 2295
            ||||||||||||| |||||||
Sbjct: 329  aaattaatgaaattgaaaata 309


>Contig-U13925-1 (Contig-U13925-1Q) /CSM_Contig/Contig-U13925-1Q.Seq.d
          Length = 1417

 Score = 42.1 bits (21), Expect = 0.004
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1029 tctccatcttcatcatcatca 1049
            |||||||||||||||||||||
Sbjct: 257  tctccatcttcatcatcatca 277


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 74,267
Number of Sequences: 8402
Number of extensions: 74267
Number of successful extensions: 10033
Number of sequences better than 10.0: 470
length of query: 2722
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2705
effective length of database: 7,932,708
effective search space: 21457975140
effective search space used: 21457975140
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

Query= Contig-U15851-1 (Contig-U15851-1Q) /CSM_Contig/Contig-U15851-1Q.Seq.d
         (2722 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ361188) Dictyostelium discoideum cDNA clone:ddc16i03, 5' ...  1086   0.0    2
(BJ386231) Dictyostelium discoideum cDNA clone:ddc57e18, 3' ...   751   0.0    2
(BJ343170) Dictyostelium discoideum cDNA clone:dda22b08, 3' ...   710   0.0    2
(BJ348375) Dictyostelium discoideum cDNA clone:dda33d04, 3' ...   708   0.0    2
(BJ361123) Dictyostelium discoideum cDNA clone:ddc9o22, 5' e...   644   0.0    3
(AU033322) Dictyostelium discoideum slug cDNA, clone SLA612.      519   0.0    3
(AY191011) Dictyostelium discoideum autophagy protein 1 (apg...   716   0.0    4
(BJ381155) Dictyostelium discoideum cDNA clone:ddc40e15, 3' ...   981   0.0    1
(AU268422) Dictyostelium discoideum vegetative cDNA clone:VS...   926   0.0    1
(BJ338427) Dictyostelium discoideum cDNA clone:dda61a18, 5' ...   817   0.0    1
(BJ380533) Dictyostelium discoideum cDNA clone:ddc38a17, 3' ...   331   e-173  6
(AU268421) Dictyostelium discoideum vegetative cDNA clone:VS...   599   e-166  1
(G65015) DH0227 Dictyostelium discoideum ( P.Dear ) Dictyost...   549   e-151  1
(BJ394202) Dictyostelium discoideum cDNA clone:dds34p04, 5' ...   331   e-143  4
(AC129399) Rattus norvegicus clone CH230-3N20, *** SEQUENCIN...    54   0.029  1
(AC177826) Zea mays chromosome 2 clone CH201-26E12; ZMMBBc00...    52   0.11   1
(CZ321761) ZMMBF0024M01r ZMMBF Zea mays genomic clone ZMMBF0...    52   0.11   1
(AM431082) Vitis vinifera contig VV78X150570.3, whole genome...    42   0.17   2
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    32   0.19   11
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    32   0.25   18
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    36   0.26   15
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen...    38   0.28   19
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    36   0.29   16
(AZ681346) ENTGL61TF Entamoeba histolytica Sheared DNA Entam...    46   0.30   2
(AZ668267) ENTKH61TF Entamoeba histolytica Sheared DNA Entam...    46   0.31   2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    36   0.34   12
(AM474565) Vitis vinifera, whole genome shotgun sequence, co...    42   0.38   5
(CT583690) Zebrafish DNA sequence from clone CH211-89L23 in ...    50   0.45   1
(CU207305) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.45   1
(CU138530) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    50   0.45   1
(DE251653) Oryzias latipes DNA, clone: ola1-119K06.F, genomi...    50   0.45   1
(FC850896) CBHN6554.rev CBHN Metridium senile tentacle Metri...    50   0.45   1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    32   0.68   18
(DX481657) Cpl23318 Papaya Genomic DNA BAC Library Carica pa...    42   0.82   2
(EK402436) 1095469545265 Global-Ocean-Sampling_GS-31-01-01-1...    38   0.98   2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    36   1.2    10
(AC195838) Zea mays chromosome 4 clone ZMMBBb-491I19; ZMMBBb...    40   1.3    9
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont...    36   1.7    12
(AM423279) Vitis vinifera contig VV78X278779.4, whole genome...    48   1.8    1
(AX345631) Sequence 702 from Patent WO0200928.                     48   1.8    1
(AE014296) Drosophila melanogaster chromosome 3L, complete s...    48   1.8    1
(AC093454) Drosophila melanogaster 3L BAC RP98-23K2 (Roswell...    48   1.8    1
(AC155537) Zea mays strain B73 clone ZMMBBc0140N10, *** SEQU...    48   1.8    1
(AC103210) Rattus norvegicus clone CH230-75L6, *** SEQUENCIN...    48   1.8    1
(AC103208) Rattus norvegicus clone CH230-32H11, *** SEQUENCI...    48   1.8    1
(AC217825) Zea mays chromosome 7 clone CH201-219A20; ZMMBBc0...    48   1.8    1
(AC214426) Zea mays chromosome 6 clone CH201-240E1; ZMMBBc02...    48   1.8    1
(AC211758) Zea mays chromosome 4 clone CH201-538I15; ZMMBBc0...    48   1.8    1
(AC210811) Zea mays chromosome 8 clone CH201-309O19; ZMMBBc0...    48   1.8    1
(AC207305) Zea mays chromosome 2 clone CH201-56N24; ZMMBBc00...    48   1.8    1
(AC198655) Zea mays chromosome 5 clone CH201-82B15; ZMMBBc00...    48   1.8    1
(AC194147) Zea mays chromosome 6 clone CH201-361N19; ZMMBBc0...    48   1.8    1
(AC192451) Zea mays chromosome 5 clone ZMMBBb-478B22; ZMMBBb...    48   1.8    1
(AC191321) Zea mays chromosome 2 clone CH201-5D19; ZMMBBc000...    48   1.8    1
(AC184779) Zea mays chromosome 5 clone CH201-218D15; ZMMBBc0...    48   1.8    1
(AC014418) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    48   1.8    1
(DX991122) CHORI103-12D11.TV CHORI103 Schistosoma mansoni ge...    48   1.8    1
(DX429136) BE1082_P21_F IASMA L1 HindIII BAC library Vitis v...    48   1.8    1
(CU759384) A BAC library has been constructed from PN40024 g...    48   1.8    1
(CG915134) ZMMBBb0380H15.f ZMMBBb Zea mays subsp. mays genom...    48   1.8    1
(CG883505) ZMMBBb0493J07r ZMMBBb (HindIII) Zea mays subsp. m...    48   1.8    1
(FG661108) G1142P33FN15.T0 Anolis carolinensis pooled normal...    48   1.8    1
(AL031745) Plasmodium falciparum DNA from MAL1P2.                  40   1.8    19
(AV101992) Mus musculus ES cell cDNA, partial sequence, clon...    42   1.8    2
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881...    34   2.1    6
(AE001403) Plasmodium falciparum 3D7 chromosome 2 section 40...    34   2.4    5
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   2.5    14
(AC009994) Homo sapiens chromosome 17, clone RP11-87N3, comp...    38   2.6    8
(AC116100) Dictyostelium discoideum chromosome 2 map 6163571...    40   2.9    7
(BJ345387) Dictyostelium discoideum cDNA clone:dda23e13, 3' ...    36   3.0    2
(AX344557) Sequence 8 from Patent WO0200932.                       38   3.1    17
(CU928548) S.lycopersicum DNA sequence from clone SL_MboI-39...    32   3.1    10
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    34   3.2    18
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    34   3.3    16
(AC142177) Rattus norvegicus clone CH230-53K1, WORKING DRAFT...    32   3.3    2
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         36   3.3    22
(AC157061) Bos taurus clone CH240-64M10, WORKING DRAFT SEQUE...    34   3.4    2
(AC212929) Populus trichocarpa clone POP068-E20, complete se...    40   3.5    5
(CR105641) Reverse strand read from insert in 5'HPRT inserti...    46   3.8    2
(AC008185) Drosophila melanogaster strain y chromosome 2 clo...    38   3.8    7
(AF356600) Dictyostelium discoideum filament-interacting pro...    46   3.9    3
(CR052856) Reverse strand read from insert in 5'HPRT inserti...    46   4.1    2
(AZ689321) ENTMU30TR Entamoeba histolytica Sheared DNA Entam...    38   4.2    2
(DU000904) 287156 Tomato MboI BAC Library Solanum lycopersic...    38   4.4    2
(CD357507) AGENCOURT_14248748 NIH_MGC_187 Homo sapiens cDNA ...    36   4.5    2
(EG686832) RCRB692TO Castor bean cDNA library from roots, 1....    36   4.5    2
(EG670343) RCRCH76TO Castor bean cDNA library from roots, 1....    36   4.5    2
(EE256738) RFAAD56TH Castor bean cDNA library from flowers,8...    36   4.6    2
(AM483148) Vitis vinifera contig VV78X133014.2, whole genome...    38   4.6    3
(AC171077) Bos taurus clone CH240-261O17, WORKING DRAFT SEQU...    46   5.0    6
(AC126793) Medicago truncatula chromosome 8 clone mth2-17m16...    38   5.7    7
(AR546053) Sequence 1184 from patent US 6747137.                   42   5.7    2
(AC208381) Pan troglodytes BAC clone CH251-707A4 from chromo...    40   5.9    10
(AM424521) Vitis vinifera contig VV78X243020.3, whole genome...    36   6.2    4
(AM427435) Vitis vinifera contig VV78X063614.7, whole genome...    38   6.5    2
(CU468257) Zebrafish DNA sequence from clone CH73-143N15 in ...    32   6.6    9
(CD093597) MC1-0107U-V233-G12-U.B MC1-0107 Schistosoma manso...    32   6.9    3
(AL772381) Mouse DNA sequence from clone RP23-358I3 on chrom...    46   7.0    1
(E10371) cDNA encoding Pituitary Adenylate Cyclase Activatin...    46   7.0    1
(E10370) cDNA encoding Pituitary Adenylate Cyclase Activatin...    46   7.0    1
(AR211457) Sequence 39 from patent US 6399316.                     46   7.0    1
(AR211456) Sequence 38 from patent US 6399316.                     46   7.0    1
(AR211449) Sequence 31 from patent US 6399316.                     46   7.0    1
(AR211448) Sequence 30 from patent US 6399316.                     46   7.0    1
(AR070302) Sequence 39 from patent US 5892004.                     46   7.0    1
(AR070301) Sequence 38 from patent US 5892004.                     46   7.0    1
(AR070294) Sequence 31 from patent US 5892004.                     46   7.0    1
(AR070293) Sequence 30 from patent US 5892004.                     46   7.0    1
(AR028897) Sequence 39 from patent US 5858787.                     46   7.0    1
(AR028896) Sequence 38 from patent US 5858787.                     46   7.0    1
(AR028889) Sequence 31 from patent US 5858787.                     46   7.0    1
(AR028888) Sequence 30 from patent US 5858787.                     46   7.0    1
(D17290) Bos taurus mRNA for PACAP receptor and alternativel...    46   7.0    1
(AC091758) Sus scrofa clone RP44-460E16, complete sequence.        46   7.0    1
(AY448006) Diploptera punctata milk protein (W3) gene, exons...    46   7.0    1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    46   7.0    1
(AL139001) Human DNA sequence from clone RP11-1G3 on chromos...    46   7.0    1
(AC099537) Homo sapiens chromosome 3 clone RP11-44E8, comple...    46   7.0    1
(AC079772) Homo sapiens BAC clone RP11-256F13 from 4, comple...    46   7.0    1
(AC156259) Oryctolagus cuniculus clone LB1-241M12, WORKING D...    46   7.0    1
(AC154155) Oryctolagus cuniculus clone LB1-120P5, WORKING DR...    46   7.0    1
(AC105428) Mus musculus strain C57BL6/J clone RP23-59M10, WO...    46   7.0    1
(FP015792) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   7.0    1
(AC092082) Bos taurus clone RP42-146L8, WORKING DRAFT SEQUEN...    46   7.0    1
(AC091757) Sus scrofa clone RP44-206B19, WORKING DRAFT SEQUE...    46   7.0    1
(AC078812) Homo sapiens chromosome 3 clone RP11-457K5, *** S...    46   7.0    1
(AC027566) Homo sapiens chromosome 18 clone RP11-111H23 map ...    46   7.0    1
(CU407193) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   7.0    1
(CU019577) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   7.0    1
(AC230163) Bos taurus clone CH240-519G10, WORKING DRAFT SEQU...    46   7.0    1
(AC186937) Callicebus moloch clone LB5-270F15, WORKING DRAFT...    46   7.0    1
(AC184015) Felis catus clone RP86-18M8, WORKING DRAFT SEQUEN...    46   7.0    1
(AC183459) Atelerix albiventris clone LB4-439D9, WORKING DRA...    46   7.0    1
(AC171755) Atelerix albiventris clone LB4-201L15, WORKING DR...    46   7.0    1
(AC163588) Bos taurus clone CH240-130B17, WORKING DRAFT SEQU...    46   7.0    1
(AZ528404) ENTCJ59TF Entamoeba histolytica Sheared DNA Entam...    46   7.0    1
(EI920823) VUH2-51C11TR VUUBBa (VUH2) Vigna unguiculata geno...    46   7.0    1
(ED041210) AUAC-aaw93d03.b1 Ascaris suum whole genome shotgu...    46   7.0    1
(DX476860) Cpl19098 Papaya Genomic DNA BAC Library Carica pa...    46   7.0    1
(DU300831) 1098448252752 CHORI-243 Ovis aries genomic clone ...    46   7.0    1
(CT324996) Sus scrofa genomic clone CH242-326O1, genomic sur...    46   7.0    1
(CC201505) CH261-4N8_RM1.2 CH261 Gallus gallus genomic clone...    46   7.0    1
(CC184928) CH261-4M8_RM1.1 CH261 Gallus gallus genomic clone...    46   7.0    1
(BZ950048) CH240_39K17.TV CHORI-240 Bos taurus genomic clone...    46   7.0    1
(BH726096) BOHWX76TR BO_2_3_KB Brassica oleracea genomic clo...    46   7.0    1
(DY977277) CLSS11043.b1_F02.ab1 CLS(LMS) lettuce sativa Lact...    46   7.0    1
(DW134021) CLSY1502.b1_L16.ab1 CLS(XYZ) lettuce sativa Lactu...    46   7.0    1
(DW123129) CLRZ5520.b1_P11.ab1 CLR(XYZ) lettuce serriola Lac...    46   7.0    1
(DW116465) CLRY4556.b1_H12.ab1 CLR(XYZ) lettuce serriola Lac...    46   7.0    1
(CT851676) Oryza sativa Indica Group EST sequence:OSIGCRA223...    46   7.0    1
(BU010449) QGJ13H17.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    46   7.0    1
(FG906717) UCRVU08_CCNS4727_g1 Cowpea IT97K-461-4 Mixed Tiss...    46   7.0    1
(EY835021) PT11-C2-301-017-E01-CT.F Poncirus trifoliata bark...    46   7.0    1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    46   7.0    1
(AF362369) Dictyostelium discoideum histidine kinase DhkG (d...    36   7.2    5
(AC177109) Strongylocentrotus purpuratus clone R3-4014B6, WO...    36   7.4    7
(AC183864) Felis catus clone RP86-107D22, WORKING DRAFT SEQU...    34   7.4    7
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    32   7.8    11
(AC096667) Homo sapiens BAC clone RP11-363K21 from 2, comple...    36   8.1    11
(AY176327) Staphylococcus phage K, complete genome.                40   8.4    11
(CC052223) SALK_015218.46.85.x Arabidopsis thaliana TDNA ins...    36   8.5    2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    34   8.7    20
(CR403788) Arabidopsis thaliana T-DNA flanking sequence GK-8...    36   8.9    2
(CU207366) Gramella forsetii KT0803 complete circular genome.      34   9.7    2
(AF339902) Dictyostelium discoideum phosphatidylinositol pho...    32   10.0   4

>(BJ361188) Dictyostelium discoideum cDNA clone:ddc16i03, 5' end,
           single read.
          Length = 587

 Score = 1086 bits (548), Expect(2) = 0.0
 Identities = 548/548 (100%)
 Strand = Plus / Plus


Query: 1   aatggttcaaaaagaattggagctacaaattaaacaaattggttcagataatttcactca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15  aatggttcaaaaagaattggagctacaaattaaacaaattggttcagataatttcactca 74


Query: 61  taagtttaagaaattcacttcttcaaaagctgaacatctcgatagtttacaaatatttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  taagtttaagaaattcacttcttcaaaagctgaacatctcgatagtttacaaatatttat 134


Query: 121 caaacaagttgaagaaacttatcaatcaacaatagcttacttttgtgaagaaaacattca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 caaacaagttgaagaaacttatcaatcaacaatagcttacttttgtgaagaaaacattca 194


Query: 181 accagaagaattctttcaaattattttcaatttcattaatttggtattgaaagttcataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 accagaagaattctttcaaattattttcaatttcattaatttggtattgaaagttcataa 254


Query: 241 agagaatgaagatattagaattgctgcattaccaaaatcaaagaaatatcaagaacaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agagaatgaagatattagaattgctgcattaccaaaatcaaagaaatatcaagaacaaca 314


Query: 301 aaataaaccaactcaaaataatgatcatagtactaaatcaaaattatcaaatttaccatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaataaaccaactcaaaataatgatcatagtactaaatcaaaattatcaaatttaccatc 374


Query: 361 ttcaagtagtattaatgatgaaagttcttcatcggcatcattgtcatcattatcaactaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttcaagtagtattaatgatgaaagttcttcatcggcatcattgtcatcattatcaactaa 434


Query: 421 tgttaatgccaatactgaaaatgataatttggaattatcaaaacttggtttcttatcaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tgttaatgccaatactgaaaatgataatttggaattatcaaaacttggtttcttatcaaa 494


Query: 481 attaagaaaaaagagatcaaaatcagaacaagaacctgtggtggagccaattcaaatcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 attaagaaaaaagagatcaaaatcagaacaagaacctgtggtggagccaattcaaatcac 554


Query: 541 tccaaaag 548
           ||||||||
Sbjct: 555 tccaaaag 562

 Score = 52.0 bits (26), Expect(2) = 0.0
 Identities = 26/26 (100%)
 Strand = Plus / Plus


Query: 549 gttggatcagctgcatctgcagaacc 574
           ||||||||||||||||||||||||||
Sbjct: 562 gttggatcagctgcatctgcagaacc 587

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 3,034,634,329
Number of extensions: 195041578
Number of successful extensions: 16945980
Number of sequences better than 10.0: 166
Length of query: 2722
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2697
Effective length of database: 96,311,147,814
Effective search space: 259751165654358
Effective search space used: 259751165654358
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

Query= Contig-U15851-1 (Contig-U15851-1Q) /CSM_Contig/Contig-U15851-1Q.Seq.d
         (2722 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86CS2) RecName: Full=Serine/threonine-protein kinase atg1;    ...   295   1e-96
(Q54NF3) RecName: Full=Uncharacterized protein DDB_G0285291;          183   3e-44
AF479306_1(AF479306|pid:none) Arachis hypogaea putative extensin...    38   2.3
AY849557_62(AY849557|pid:none) Lactococcus lactis plasmid pGdh44...    36   6.6
AL138642_13(AL138642|pid:none) Arabidopsis thaliana DNA chromoso...    36   6.6
AY035049_1(AY035049|pid:none) Arabidopsis thaliana putative seri...    36   6.6
AM114193_3038(AM114193|pid:none) Uncultured methanogenic archaeo...    36   6.6
DQ200373_1(DQ200373|pid:none) Solanum tuberosum clone 059F05 pre...    36   8.6

>(Q86CS2) RecName: Full=Serine/threonine-protein kinase atg1;
            EC=2.7.11.1; AltName: Full=Autophagy-related protein 1;
            &AY191011_1(AY191011|pid:none)
          Length = 668

 Score =  295 bits (755), Expect(2) = 1e-96
 Identities = 145/148 (97%), Positives = 146/148 (98%)
 Frame = +1

Query: 2224 ISDNEPLECVPLYILALKLMKSKIPNDPSSSPDKFINTFTEYKRKLVHIFSTSNTSVKNQ 2403
            +  NEPLECVPLYILALKLMKSKIPNDPSSSPDKFINTFTEYKRKLVHIFSTSNTSVKNQ
Sbjct: 512  LRQNEPLECVPLYILALKLMKSKIPNDPSSSPDKFINTFTEYKRKLVHIFSTSNTSVKNQ 571

Query: 2404 DHHSSFSPNRFIYENALEFGKKGAVEELYNNYPTSLQFYTDGTLLLEYLSSIVIDSDDQE 2583
            DHHSSFSPNRFIYENALEFGKKGAVEELYNNYPTSLQFYTDGTLLLEYLSSIVIDSDDQE
Sbjct: 572  DHHSSFSPNRFIYENALEFGKKGAVEELYNNYPTSLQFYTDGTLLLEYLSSIVIDSDDQE 631

Query: 2584 IIKKYLNAFEVRTQICKKNYENSKNTVL 2667
            IIKKYLNAFEVRTQICKKNYENSKNTVL
Sbjct: 632  IIKKYLNAFEVRTQICKKNYENSKNTVL 659

 Score = 84.7 bits (208), Expect(2) = 1e-96
 Identities = 43/44 (97%), Positives = 43/44 (97%)
 Frame = +3

Query: 2103 NRQLSNLSTDFERDLVIXDGEELESMERVFNRAVAIAELGDLRQ 2234
            NRQLSNLSTDFERDLVI DGEELESMERVFNRAVAIAELGDLRQ
Sbjct: 471  NRQLSNLSTDFERDLVILDGEELESMERVFNRAVAIAELGDLRQ 514

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,344,801,650
Number of extensions: 57678312
Number of successful extensions: 149517
Number of sequences better than 10.0: 8
Number of HSP's gapped: 149325
Number of HSP's successfully gapped: 10
Length of query: 907
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 769
Effective length of database: 604,535,722
Effective search space: 464887970218
Effective search space used: 464887970218
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.68  gvh: 0.44  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 36.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for Contig-U15851-1 is cyt