Contig-U15846-1
Contig ID Contig-U15846-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Contig-U15846-1Q.Seq.d
ATTCAAATGGGTCATGTGGTAATTCACCATTTACATTATGTAAAAATAAT
GCAACATTATTAGAGAATGGTGGACAAAGAATTGATATAGATAAAGAGAA
TGGTAGAATTTTATTTACAATTAAATATAGTGATGAATTTGAACCAAGAG
TAGTTTCAGTACCAATTCAACCCCAGGTAAATGAAAATGGTAATTATTTA
AAATCACAAAATACATTATTTGGTCAAACAACATATACAAAAGTTATTGG
TTTATTACAATTGGTTGATTCGAAATCACAAAATATTGTTATCGATATTG
AAAGACGTATAGCAGGTCCAACAAGTAATATATTCTTTACAAATAATACA
ATTGGAAATGAATTAACATGGAATCAAATTGGTAATTTCATTTTCAAACA
ATCTACAAATACTCAATACACATGTTGGCCATATGCAAATAAAATATTTA
AAGGTGAAATTGGTAAATATAATGATTTAGGTGAAACTTTATATAATGGT
ATTCAAATGGGTCATGTGGTAATTCACCATTTACATTATGTAAAAATAAT
GCAACATTATTAGAGAATGGTGGACAAAGAATTGATATAGATAAAGAGAA
TGGTAGAATTTTATTTACAATTAAATATAGTGATGAATTTGAACCAAGAG
TAGTTTCAGTACCAATTCAACCCCAGGTAAATGAAAATGGTAATTATTTA
AAATCACAAAATACATTATTTGGTCAAACAACATATACAAAAGTTATTGG
TTTATTACAATTGGTTGATTCGAAATCACAAAATATTGTTATCGATATTG
AAAGACGTATAGCAGGTCCAACAAGTAATATATTCTTTACAAATAATACA
ATTGGAAATGAATTAACATGGAATCAAATTGGTAATTTCATTTTCAAACA
ATCTACAAATACTCAATACACATGTTGGCCATATGCAAATAAAATATTTA
AAGGTGAAATTGGTAAATATAATGATTTAGGTGAAACTTTATATAATGGT
----------GATTTAGGTGAAACTTTATATAATGGTCCATGTTTTGAAA
TGAAATCAAATGGCATTAACACCGCCACCACCAGTGGTAATGATGACGGT
AGTGATTTATATATTTATGATGGTACAAATGTAATTTATAAAGGTAGCTT
AAGTCCAAAAAGTAATGGTGGATATATTCGTGATTTACCAATGGTGTATA
ATGAAAGTAAAGCATATACAATTAAAGAATTTGACGTTTCAACAAGTGAT
TTATATTATTCAAATCAATTTGATAAAAAATTATATTCAATTTCATTATC
AAATACATTTGGACCAAAGAAAACTATTTTATCAGATTTACCAACTTCTT
TTAAATATTATAATGATTTCATTTATTATTCATTAAATGGTAAAATTTCA
AGAATTAATGTTAATACAGGTTTAAATGAAATTTTATTTGATTCAAATTT
AAATAAAAGTCATTGTATTTGTGCTCAAGGTTTTACGGGTGATTACATGT
GATCATTGTGATCAATCAAATAATTTAATATCTTGGGTAAAAGGTATTCC
AAGATGTATACCATTAACAAATGATGGTAATCCAATAACTTGTGATTTTA
ATTATCAATGTTCACCATATAATGTTAAAATTTGTAAAGAAATTGTTTTA
TCTGGTGGTAATAAAGGTTGTTCAACTTGAGAGAGAGAATAAAAATATTT
ATTTTAAATTATTATTTATTTATTTTTTTTTTTTTAAAAAATAAAAAAAT
TAATAATAATAATAAACTATTCAATAAAAAATATAAAAATAAAAAAATAT
AAAATATAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap gap included
Contig length 1839
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 8
Number of EST 10
Link to clone list U15846
List of clone(s)

est1=CFG831X,1,1000
est2=CFG831F,27,217
est3=CFH443Z,1001,1632
est4=SSD266E,1001,1801
est5=CFH365Z,1018,1573
est6=SFI683Z,1035,1563
est7=CFG831Z,1047,1676
est8=SSE646F,1206,1838
est9=SSB120Z,1224,1808
est10=CFD810Z,1364,1563
Translated Amino Acid sequence
fkwvmw*ftiyim*k*cniirewwtkn*yr*rew*nfiyn*i***i*tkssfstnstpgk
*kw*lfkitkyiiwsnniyksywfitig*feitkycyry*ktysrsnk*yilyk*ynwk*
inmesnw*fhfqtiykysihmlaick*ni*r*nw*i**fr*nfi*WYSNGSCGNSPFTLC
KNNATLLENGGQRIDIDKENGRILFTIKYSDEFEPRVVSVPIQPQVNENGNYLKSQNTLF
GQTTYTKVIGLLQLVDSKSQNIVIDIERRIAGPTSNIFFTNNTIGNELTWNQIGNFIFKQ
STNTQYTCWPYANKIFKGEIGKYNDLGETLYNG---

---DLGETLYNGPCFEMKSNGINTATTSGNDDGSDLYIYDGTNVIYKGSLSPKSNGGYIR
DLPMVYNESKAYTIKEFDVSTSDLYYSNQFDKKLYSISLSNTFGPKKTILSDLPTSFKYY
NDFIYYSLNGKISRINVNTGLNEILFDSNLNKSHCICAQGFTGDYM*sl*sik*fnilgk
ryskmytink*w*snnl*f*lsmfti*c*nl*rncfiww**rlfnlrerikifilnyylf
iffflknkkinnnnklfnkkyknkki*nik*kkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
iqmghvvihhlhyvkimqhy*rmvdkeli*ikrmvefylqlnivmnlnqe*fqyqfnpr*
mkmvii*nhkihylvkqhiqkllvyynwlirnhkillsilkdv*qvqqviyslqiiqlem
n*hgiklvisfsnnlqilnthvghmqikylkvklvnimi*vklyimvfkwvmw*ftiyim
*k*cniirewwtkn*yr*rew*nfiyn*i***i*tkssfstnstpgk*kw*lfkitkyii
wsnniyksywfitig*feitkycyry*ktysrsnk*yilyk*ynwk*inmesnw*fhfqt
iykysihmlaick*ni*r*nw*i**fr*nfi*w---

---DLGETLYNGPCFEMKSNGINTATTSGNDDGSDLYIYDGTNVIYKGSLSPKSNGGYIR
DLPMVYNESKAYTIKEFDVSTSDLYYSNQFDKKLYSISLSNTFGPKKTILSDLPTSFKYY
NDFIYYSLNGKISRINVNTGLNEILFDSNLNKSHCICAQGFTGDYM*sl*sik*fnilgk
ryskmytink*w*snnl*f*lsmfti*c*nl*rncfiww**rlfnlrerikifilnyylf
iffflknkkinnnnklfnkkyknkki*nik*kkkkkkkkkkk

Frame B:
fkwvmw*ftiyim*k*cniirewwtkn*yr*rew*nfiyn*i***i*tkssfstnstpgk
*kw*lfkitkyiiwsnniyksywfitig*feitkycyry*ktysrsnk*yilyk*ynwk*
inmesnw*fhfqtiykysihmlaick*ni*r*nw*i**fr*nfi*WYSNGSCGNSPFTLC
KNNATLLENGGQRIDIDKENGRILFTIKYSDEFEPRVVSVPIQPQVNENGNYLKSQNTLF
GQTTYTKVIGLLQLVDSKSQNIVIDIERRIAGPTSNIFFTNNTIGNELTWNQIGNFIFKQ
STNTQYTCWPYANKIFKGEIGKYNDLGETLYNG---

---i*vklyimvhvlk*nqmaltppppvvmmtvviyifmmvqm*fikva*vqkvmvdifv
iyqwcimkvkhiqlknltfqqviyiiqinliknyiqfhyqihldqrklfyqiyqlllnii
misfiih*mvkfqelmliqv*mkfyliqi*ikvivfvlkvlrvitcdhcdqsnnliswvk
giprcipltndgnpitcdfnyqcspynvkickeivlsggnkgcst*ere*kylf*iiiyl
ffff*kikkliiiinysiknikikkyki*nkkkkkkkkkkkk

Frame C:
sngscgnspftlcknnatllenggqrididkengrilftikysdefeprvvsvpiqpqvn
engnylksqntlfgqttytkvigllqlvdsksqnividierriagptsnifftnntigne
ltwnqignfifkqstntqytcwpyankifkgeigkyndlgetlyngiqmghvvihhlhyv
kimqhy*rmvdkeli*ikrmvefylqlnivmnlnqe*fqyqfnpr*mkmvii*nhkihyl
vkqhiqkllvyynwlirnhkillsilkdv*qvqqviyslqiiqlemn*hgiklvisfsnn
lqilnthvghmqikylkvklvnimi*vklyim---

---fr*nfi*wsmf*neikwh*hrhhqw***r**fiyl*wykcnl*r*lkskk*wwiys*
ftngv**k*siyn*ri*rfnk*filfksi**kiifnfiikyiwtkenyfirftnff*il*
*fhllfikw*nfkn*c*yrfk*nfi*fkfk*kslylcsrfyg*lhviivinqii*ylg*k
vfqdvyh*qmmviq*lviliinvhhimlkfvkklfylvvikvvqlerenkniyfkllfiy
ffffkk*kn*****tiq*ki*k*knikykikkkkkkkkkkkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15846-1 (Contig-U15846-1Q)
/CSM_Contig/Contig-U15846-1Q.Seq.d
(1849 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Conti... 3301 0.0
Contig-U11516-1 (Contig-U11516-1Q) /CSM_Contig/Conti... 44 8e-04
Contig-U04577-1 (Contig-U04577-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U15312-1 (Contig-U15312-1Q) /CSM_Contig/Conti... 40 0.012
Contig-U14906-1 (Contig-U14906-1Q) /CSM_Contig/Conti... 40 0.012
Contig-U12541-1 (Contig-U12541-1Q) /CSM_Contig/Conti... 40 0.012
Contig-U16426-1 (Contig-U16426-1Q) /CSM_Contig/Conti... 38 0.047
Contig-U15955-1 (Contig-U15955-1Q) /CSM_Contig/Conti... 38 0.047
Contig-U15249-1 (Contig-U15249-1Q) /CSM_Contig/Conti... 38 0.047
Contig-U13965-1 (Contig-U13965-1Q) /CSM_Contig/Conti... 38 0.047

>Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Contig-U15846-1Q.Seq.d
Length = 1849

Score = 3301 bits (1665), Expect = 0.0
Identities = 1695/1695 (100%)
Strand = Plus / Plus


Query: 1 attcaaatgggtcatgtggtaattcaccatttacattatgtaaaaataatgcaacattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcaaatgggtcatgtggtaattcaccatttacattatgtaaaaataatgcaacattat 60


Query: 61 tagagaatggtggacaaagaattgatatagataaagagaatggtagaattttatttacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagagaatggtggacaaagaattgatatagataaagagaatggtagaattttatttacaa 120


Query: 121 ttaaatatagtgatgaatttgaaccaagagtagtttcagtaccaattcaaccccaggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaatatagtgatgaatttgaaccaagagtagtttcagtaccaattcaaccccaggtaa 180


Query: 181 atgaaaatggtaattatttaaaatcacaaaatacattatttggtcaaacaacatatacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgaaaatggtaattatttaaaatcacaaaatacattatttggtcaaacaacatatacaa 240


Query: 241 aagttattggtttattacaattggttgattcgaaatcacaaaatattgttatcgatattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagttattggtttattacaattggttgattcgaaatcacaaaatattgttatcgatattg 300


Query: 301 aaagacgtatagcaggtccaacaagtaatatattctttacaaataatacaattggaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagacgtatagcaggtccaacaagtaatatattctttacaaataatacaattggaaatg 360


Query: 361 aattaacatggaatcaaattggtaatttcattttcaaacaatctacaaatactcaataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aattaacatggaatcaaattggtaatttcattttcaaacaatctacaaatactcaataca 420


Query: 421 catgttggccatatgcaaataaaatatttaaaggtgaaattggtaaatataatgatttag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catgttggccatatgcaaataaaatatttaaaggtgaaattggtaaatataatgatttag 480


Query: 481 gtgaaactttatataatggtattcaaatgggtcatgtggtaattcaccatttacattatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgaaactttatataatggtattcaaatgggtcatgtggtaattcaccatttacattatg 540


Query: 541 taaaaataatgcaacattattagagaatggtggacaaagaattgatatagataaagagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taaaaataatgcaacattattagagaatggtggacaaagaattgatatagataaagagaa 600


Query: 601 tggtagaattttatttacaattaaatatagtgatgaatttgaaccaagagtagtttcagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggtagaattttatttacaattaaatatagtgatgaatttgaaccaagagtagtttcagt 660


Query: 661 accaattcaaccccaggtaaatgaaaatggtaattatttaaaatcacaaaatacattatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accaattcaaccccaggtaaatgaaaatggtaattatttaaaatcacaaaatacattatt 720


Query: 721 tggtcaaacaacatatacaaaagttattggtttattacaattggttgattcgaaatcaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tggtcaaacaacatatacaaaagttattggtttattacaattggttgattcgaaatcaca 780


Query: 781 aaatattgttatcgatattgaaagacgtatagcaggtccaacaagtaatatattctttac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaatattgttatcgatattgaaagacgtatagcaggtccaacaagtaatatattctttac 840


Query: 841 aaataatacaattggaaatgaattaacatggaatcaaattggtaatttcattttcaaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaataatacaattggaaatgaattaacatggaatcaaattggtaatttcattttcaaaca 900


Query: 901 atctacaaatactcaatacacatgttggccatatgcaaataaaatatttaaaggtgaaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atctacaaatactcaatacacatgttggccatatgcaaataaaatatttaaaggtgaaat 960


Query: 961 tggtaaatataatgatttaggtgaaactttatataatggtnnnnnnnnnngatttaggtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tggtaaatataatgatttaggtgaaactttatataatggtnnnnnnnnnngatttaggtg 1020


Query: 1021 aaactttatataatggtccatgttttgaaatgaaatcaaatggcattaacaccgccacca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aaactttatataatggtccatgttttgaaatgaaatcaaatggcattaacaccgccacca 1080


Query: 1081 ccagtggtaatgatgacggtagtgatttatatatttatgatggtacaaatgtaatttata 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ccagtggtaatgatgacggtagtgatttatatatttatgatggtacaaatgtaatttata 1140


Query: 1141 aaggtagcttaagtccaaaaagtaatggtggatatattcgtgatttaccaatggtgtata 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaggtagcttaagtccaaaaagtaatggtggatatattcgtgatttaccaatggtgtata 1200


Query: 1201 atgaaagtaaagcatatacaattaaagaatttgacgtttcaacaagtgatttatattatt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 atgaaagtaaagcatatacaattaaagaatttgacgtttcaacaagtgatttatattatt 1260


Query: 1261 caaatcaatttgataaaaaattatattcaatttcattatcaaatacatttggaccaaaga 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 caaatcaatttgataaaaaattatattcaatttcattatcaaatacatttggaccaaaga 1320


Query: 1321 aaactattttatcagatttaccaacttcttttaaatattataatgatttcatttattatt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aaactattttatcagatttaccaacttcttttaaatattataatgatttcatttattatt 1380


Query: 1381 cattaaatggtaaaatttcaagaattaatgttaatacaggtttaaatgaaattttatttg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cattaaatggtaaaatttcaagaattaatgttaatacaggtttaaatgaaattttatttg 1440


Query: 1441 attcaaatttaaataaaagtcattgtatttgtgctcaaggttttacgggtgattacatgt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 attcaaatttaaataaaagtcattgtatttgtgctcaaggttttacgggtgattacatgt 1500


Query: 1501 gatcattgtgatcaatcaaataatttaatatcttgggtaaaaggtattccaagatgtata 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gatcattgtgatcaatcaaataatttaatatcttgggtaaaaggtattccaagatgtata 1560


Query: 1561 ccattaacaaatgatggtaatccaataacttgtgattttaattatcaatgttcaccatat 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ccattaacaaatgatggtaatccaataacttgtgattttaattatcaatgttcaccatat 1620


Query: 1621 aatgttaaaatttgtaaagaaattgttttatctggtggtaataaaggttgttcaacttga 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 aatgttaaaatttgtaaagaaattgttttatctggtggtaataaaggttgttcaacttga 1680


Query: 1681 gagagagaataaaaa 1695
|||||||||||||||
Sbjct: 1681 gagagagaataaaaa 1695


>Contig-U11516-1 (Contig-U11516-1Q) /CSM_Contig/Contig-U11516-1Q.Seq.d
Length = 1970

Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus


Query: 1425 aatgaaattttatttgattcaaatttaaat 1454
|||||||||||||||| ||||| |||||||
Sbjct: 821 aatgaaattttatttggttcaattttaaat 850


>Contig-U04577-1 (Contig-U04577-1Q) /CSM_Contig/Contig-U04577-1Q.Seq.d
Length = 728

Score = 42.1 bits (21), Expect = 0.003
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 1348 cttttaaatattataatgatttcat 1372
||||||||||| |||||||||||||
Sbjct: 362 cttttaaatatcataatgatttcat 386


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 55,443
Number of Sequences: 8402
Number of extensions: 55443
Number of successful extensions: 6475
Number of sequences better than 10.0: 167
length of query: 1849
length of database: 8,075,542
effective HSP length: 17
effective length of query: 1832
effective length of database: 7,932,708
effective search space: 14532721056
effective search space used: 14532721056
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2.21
Homology vs DNA
Query= Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Contig-U15846-1Q.Seq.d
(1849 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ373010) Dictyostelium discoideum cDNA clone:ddc15f12, 3' ... 940 0.0 2
(BJ402947) Dictyostelium discoideum cDNA clone:dds18e22, 3' ... 892 0.0 2
(BJ372843) Dictyostelium discoideum cDNA clone:ddc14n08, 3' ... 839 0.0 2
(BJ373048) Dictyostelium discoideum cDNA clone:ddc15b17, 3' ... 850 0.0 2
(BJ359418) Dictyostelium discoideum cDNA clone:ddc14n08, 5' ... 303 1e-77 1
(AU051834) Dictyostelium discoideum slug cDNA, clone SSB120. 268 3e-74 3
(BJ374473) Dictyostelium discoideum cDNA clone:ddc8d04, 3' e... 246 3e-73 2
(C92230) Dictyostelium discoideum slug cDNA, clone SSD266. 262 1e-72 3
(AU072475) Dictyostelium discoideum slug cDNA, clone SSE646. 170 1e-37 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 8e-06 24
(AE017308) Mycoplasma mobile 163K complete genome. 42 1e-05 22
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 3e-05 21
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 4e-05 18
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 36 1e-04 23
(CR925677) Ehrlichia ruminantium str. Gardel, complete genome. 34 3e-04 23
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 36 5e-04 24
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 7e-04 23
(CR767821) Ehrlichia ruminantium strain Welgevonden, complet... 34 8e-04 23
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 0.002 17
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 36 0.002 21
(CS468878) Sequence 69 from Patent EP1748080. 40 0.002 16
(CS419355) Sequence 69 from Patent WO2006094836. 40 0.002 16
(AC163306) Bos taurus clone CH240-144G4, *** SEQUENCING IN P... 42 0.002 8
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.002 19
(AL844509) Plasmodium falciparum chromosome 13. 36 0.002 20
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.002 17
(EF587366) Oedogonium cardiacum strain SAG 575-1b RNA polyme... 36 0.002 5
(CP000029) Staphylococcus epidermidis RP62A, complete genome. 40 0.003 20
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 30 0.005 20
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 40 0.005 18
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 34 0.006 13
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 40 0.006 11
(CP000013) Borrelia garinii PBi, complete genome. 36 0.006 20
(CU468553) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.007 11
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 34 0.007 15
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 0.007 19
(AC178191) Strongylocentrotus purpuratus clone R3-3082J17, W... 42 0.008 10
(CR925678) Ehrlichia ruminantium str. Welgevonden, complete ... 34 0.008 24
(M73817) Clostridium cellulovorans cellulose binding protein... 44 0.010 3
(AE017263) Mesoplasma florum L1 complete genome. 34 0.011 22
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.012 19
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 40 0.014 17
(CP000727) Clostridium botulinum A str. Hall, complete genome. 40 0.017 23
(AZ674472) ENTKE34TR Entamoeba histolytica Sheared DNA Entam... 40 0.017 4
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.019 16
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 42 0.025 14
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 40 0.025 23
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g... 36 0.026 20
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 36 0.027 23
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 36 0.034 19
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 36 0.034 24
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 0.035 17
(BX248583) Blochmannia floridanus complete genome. 36 0.035 23
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 42 0.035 16
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 36 0.036 11
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 32 0.039 17
(CS468877) Sequence 68 from Patent EP1748080. 40 0.044 15
(CS419354) Sequence 68 from Patent WO2006094836. 40 0.044 15
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61... 34 0.049 15
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 32 0.051 17
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 36 0.057 12
(AE014844) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.061 13
(AM285312) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 0.062 7
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 42 0.066 16
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 34 0.070 18
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 34 0.071 14
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 32 0.075 14
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 34 0.076 15
(AU072047) Dictyostelium discoideum slug cDNA, clone SSD266. 52 0.076 1
(CP000361) Arcobacter butzleri RM4018, complete genome. 40 0.078 19
(CP000728) Clostridium botulinum F str. Langeland, complete ... 34 0.078 22
(CP000312) Clostridium perfringens SM101, complete genome. 38 0.087 21
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.092 22
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 32 0.11 16
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 34 0.11 20
(AC201088) Strongylocentrotus purpuratus clone R3-13G1, WORK... 34 0.11 10
(BD061520) Genome DNA of symbiotic bacteria of aphid. 36 0.12 19
(AR409405) Sequence 1 from patent US 6632935. 36 0.12 19
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 36 0.12 19
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 0.12 18
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 38 0.13 17
(CP000940) Clostridium botulinum B1 str. Okra plasmid pCLD, ... 34 0.14 12
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 32 0.14 13
(FC587028) CAXP3958.rev CAXP Lottia gigantea from head, foot... 34 0.15 4
(EU677193) Oedogonium cardiacum strain SAG 575-1b chloroplas... 36 0.16 12
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.16 17
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.17 15
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 0.17 18
(CR550302) Zebrafish DNA sequence from clone DKEY-145I3 in l... 32 0.18 14
(AL360354) Plasmodium vivax telomeric YAC clone, complete fi... 38 0.19 12
(AL844507) Plasmodium falciparum chromosome 8. 34 0.20 18
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.20 14
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 0.22 18
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 38 0.23 15
(BX323590) Zebrafish DNA sequence from clone CH211-42I9 in l... 38 0.23 6
(CT990565) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.23 6
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 32 0.25 16
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ... 32 0.25 13
(AC178125) Strongylocentrotus purpuratus clone R3-3074P14, W... 34 0.28 11
(AC148217) Medicago truncatula chromosome 8 clone mth2-20c19... 50 0.30 1
(AC121233) Medicago truncatula chromosome 8 clone mth2-14g13... 50 0.30 1
(AC114693) Rattus norvegicus clone CH230-218G15, WORKING DRA... 50 0.30 1
(AC094439) Rattus norvegicus clone CH230-4E23, *** SEQUENCIN... 50 0.30 1
(ER355973) 1092351103932 Global-Ocean-Sampling_GS-34-01-01-1... 50 0.30 1
(EK282524) 1095462300478 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.30 1
(EJ992725) 1093023063035 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.30 1
(EJ931528) 1093018809081 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.30 1
(EJ860934) 1093017976468 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.30 1
(EJ851706) 1093017893683 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.30 1
(EJ802392) 1093017436805 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.30 1
(EJ716309) 1092959420680 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.30 1
(EJ607546) 1092962018839 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.30 1
(EJ316622) 1095403296387 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.30 1
(EJ269254) 1095351040247 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.30 1
(EJ004973) 1091138253356 Global-Ocean-Sampling_GS-26-01-01-1... 50 0.30 1
(DH594726) Rattus norvegicus DNA, BAC clone: RNB1-118G15, 3'... 50 0.30 1
(CT811718) Paramecium tetraurelia 5-PRIME EST from clone LK0... 50 0.30 1
(CT798980) Paramecium tetraurelia 5-PRIME EST from clone LK0... 50 0.30 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 34 0.30 20
(AE015927) Clostridium tetani E88, complete genome. 38 0.31 20
(DQ927303) Tetrahymena malaccensis strain MP75 mitochondrion... 32 0.31 8
(AY689436) Deerpox virus W-848-83, complete genome. 38 0.32 12
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 0.35 16
(AC120522) Canis lupus familiaris clone RP81-417N7, WORKING ... 34 0.36 10
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.38 23
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 36 0.39 21
(AC144482) Medicago truncatula clone mth2-10p1, complete seq... 34 0.39 13
(AX392734) Sequence 24 from Patent WO0212526. 34 0.39 8
(AR707081) Sequence 24 from patent US 6933145. 34 0.39 8
(AC191960) Glyptapanteles indiensis clone 18I8 and 20D14, **... 34 0.41 12
(AC232530) Brassica rapa subsp. pekinensis clone KBrB086B23,... 38 0.42 10
(AF538053) Monosiga brevicollis mitochondrion, complete genome. 32 0.42 13
(DQ336954) Glycine max cultivar Williams 82 clone BAC gmw-74... 34 0.44 12
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 32 0.47 18
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 30 0.48 20
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s... 30 0.49 15
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 36 0.50 18
(EJ506510) 1095403721383 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.50 3
(AM285303) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 0.50 9
(AC176604) Strongylocentrotus purpuratus clone R3-3079E22, W... 34 0.53 9
(AP009035) Bombyx mori genomic DNA, chromosome 18, BAC clone... 36 0.56 9
(EL505705) H06_1763_603.AB1 Blood stage Plasmodium falciparu... 34 0.56 3
(FP067353) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.57 10
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 32 0.57 19
(ER494933) 1093015343658 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.61 2
(BX510653) Zebrafish DNA sequence from clone DKEY-100F21 in ... 36 0.62 5
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 36 0.62 25
(AY336382) Symplocos paniculata isolate RSpaniculata306 ribo... 48 0.64 2
(AY336383) Symplocos chinensis isolate RSchinensis300 riboso... 48 0.64 2
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 34 0.69 18
(AC201231) Strongylocentrotus purpuratus clone R3-15J15, WOR... 34 0.71 9
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 36 0.71 21
(CP000993) Borrelia recurrentis A1, complete genome. 32 0.74 23
(EU275727) Dictyostelium fasciculatum strain SH3 mitochondri... 32 0.75 10
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome. 32 0.75 24
(BX322663) Zebrafish DNA sequence from clone CH211-224D23 in... 32 0.75 9
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 32 0.77 19
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 34 0.87 21
(AM180355) Clostridium difficile 630 complete genome. 36 0.88 21
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 34 0.89 20
(AC201529) Strongylocentrotus purpuratus clone R3-3090C1, WO... 36 0.91 6
(DQ832718) Phytophthora ramorum mitochondrion, complete genome. 30 0.96 8
(AF165818) Guillardia theta nucleomorph chromosome 1, comple... 34 0.97 14
(EU427470) Phytophthora ramorum strain CBS 101553 mitochondr... 30 0.98 8
(AC126786) Medicago truncatula clone mth2-8c2, complete sequ... 34 1.0 12
(CU571057) M.truncatula DNA sequence from clone MTH2-52O4 on... 34 1.1 13
(AC023053) Homo sapiens chromosome 12 clone RP11-490L11, WOR... 36 1.1 13
(AC182715) Populus trichocarpa clone Pop1-87I15, complete se... 40 1.1 6
(BH157434) ENTSL90TF Entamoeba histolytica Sheared DNA Entam... 40 1.1 3
(AC020614) Homo sapiens chromosome 12 clone RP11-121D8, WORK... 36 1.2 12
(AL928732) Mouse DNA sequence from clone RP23-403C18 on chro... 48 1.2 1
(AC166990) Mus musculus BAC clone RP24-173K24 from chromosom... 48 1.2 1
(AC158523) Mus musculus BAC clone RP23-371I11 from chromosom... 48 1.2 1
(DQ086307) Symplocos microstyla voucher Almeda et al. 8878 r... 48 1.2 1
(DQ086306) Symplocos organensis voucher Almeda et al. 8792 r... 48 1.2 1
(DQ086305) Symplocos falcata voucher Almeda et al. 8789 ribo... 48 1.2 1
(DQ086304) Symplocos falcata voucher Almeda et al. 8782 ribo... 48 1.2 1
(DQ086303) Symplocos candelabra voucher Almeda et al. 8910 r... 48 1.2 1
(DQ086302) Symplocos uniflora voucher Almeda et al. 8787 rib... 48 1.2 1
(DQ086301) Symplocos nitens voucher Almeda et al. 8931 ribos... 48 1.2 1
(DQ086300) Symplocos variabilis voucher Almeda et al. 8813 r... 48 1.2 1
(DQ086299) Symplocos pentandra voucher Almeda et al. 8876 ri... 48 1.2 1
(DQ086298) Symplocos pentandra voucher Almeda et al. 8779 ri... 48 1.2 1
(DQ086297) Symplocos lanceolata voucher Almeda et al. 8919 r... 48 1.2 1
(DQ086296) Symplocos itatiaiae voucher Almeda et al. 8794 ri... 48 1.2 1
(DQ086295) Symplocos glaberrima voucher Almeda et al. 8912 r... 48 1.2 1
(DQ086294) Symplocos celastrinea voucher Almeda et al. 8784 ... 48 1.2 1
(AY679791) Symplocos glomerata isolate 363 ribosomal protein... 48 1.2 1
(AY679790) Symplocos glomerata isolate 362 ribosomal protein... 48 1.2 1
(AY679789) Symplocos celastrinea isolate A3708 ribosomal pro... 48 1.2 1
(AY630720) Symplocos laurina isolate Rslaurina368 ribosomal ... 48 1.2 1
(AY630719) Symplocos laurina isolate RSlaurinaA2 ribosomal p... 48 1.2 1
(AY630718) Symplocos arborea isolate RSarborea448 ribosomal ... 48 1.2 1
(AY630717) Symplocos aff. munda 442 isolate RSAmunda442 ribo... 48 1.2 1
(AY630716) Symplocos aff. caerulescens 445 isolate RSAcaerul... 48 1.2 1
(AY630715) Symplocos setchuensis isolate RSsetchuensisA1 rib... 48 1.2 1
(AY630714) Symplocos migoi isolate RSmigoiD4 ribosomal prote... 48 1.2 1
(AY630713) Symplocos spectabilis isolate RSspectabilisC2 rib... 48 1.2 1
(AY630712) Symplocos sp. 11 ribosomal protein L16 (rpl16) ge... 48 1.2 1
(AY630711) Symplocos persistens isolate RSpersistensS226 rib... 48 1.2 1
(AY630710) Symplocos macrophylla isolate RSmacrophylla479 ri... 48 1.2 1
(AY630709) Symplocos macrophylla isolate RSmacrophylla420 ri... 48 1.2 1
(AY630708) Symplocos heishanensis isolate RSheishanensis12 r... 48 1.2 1
(AY630707) Symplocos dryophila isolate RSdryophila364 riboso... 48 1.2 1
(AY630706) Symplocos dolichotricha isolate RSdolichotricha10... 48 1.2 1
(AY630705) Symplocos austrosinensis isolate RSaustrosinensis... 48 1.2 1
(AY630704) Symplocos verrucisurcula isolate RSverrucisurcula... 48 1.2 1
(AY630703) Symplocos sulcinervia isolate RSsulcinervia481 ri... 48 1.2 1
(AY630702) Symplocos speciosa isolate RSspeciosa_434 ribosom... 48 1.2 1
(AY630701) Symplocos speciosa isolate RSspeciosa_A2706 ribos... 48 1.2 1
(AY630700) Symplocos sp. 486 ribosomal protein L16 (rpl16) g... 48 1.2 1
(AY630699) Symplocos sp. 485 ribosomal protein L16 (rpl16) g... 48 1.2 1
(AY630698) Symplocos sp. 480 ribosomal protein L16 (rpl16) g... 48 1.2 1
(AY630697) Symplocos sp. 443 ribosomal protein L16 (rpl16) g... 48 1.2 1
(AY630696) Symplocos sp. 438 ribosomal protein L16 (rpl16) g... 48 1.2 1
(AY630695) Symplocos serrulata isolate RSserrulata458 riboso... 48 1.2 1
(AY630694) Symplocos reflexa isolate RSreflexa482 ribosomal ... 48 1.2 1
(AY630693) Symplocos quitensis isolate RSquitensis440 riboso... 48 1.2 1
(AY630692) Symplocos pycnantha isolate RSpycnantha429 riboso... 48 1.2 1
(AY630691) Symplocos povedae isolate RSpovedae461 ribosomal ... 48 1.2 1
(AY630690) Symplocos matudae isolate RSmatudae437 ribosomal ... 48 1.2 1
(AY630689) Symplocos martinicensis isolate RSmartinicensis44... 48 1.2 1
(AY630688) Symplocos fuscata isolate RSfuscata483 ribosomal ... 48 1.2 1
(AY630687) Symplocos coccinea isolate RScoccinea435 ribosoma... 48 1.2 1
(AY630686) Symplocos citrea isolate RScitrea430 ribosomal pr... 48 1.2 1
(AY630685) Symplocos brenesii isolate Rsbrenesii424 ribosoma... 48 1.2 1
(AY630684) Symplocos breedlovei isolate RSbreedlovei431 ribo... 48 1.2 1
(AY630683) Symplocos bicolor isolate RSbicolor459 ribosomal ... 48 1.2 1
(AY630682) Symplocos austromexicana isolate RSaustromexicana... 48 1.2 1
(AY630681) Symplocos lanata isolate RSlanata457 ribosomal pr... 48 1.2 1
(AY630680) Symplocos bogotensis isolate RSbogotensis441 ribo... 48 1.2 1
(AY376902) Symplocos kleinii ribosomal protein L16 (rpl16) g... 48 1.2 1
(AY336426) Symplocos celastrifolia isolate RScelastrifoliaA3... 48 1.2 1
(AY336425) Symplocos pilosa isolate RSpilosa6 ribosomal prot... 48 1.2 1
(AY336424) Symplocos adenopus isolate RSadenopusS227 ribosom... 48 1.2 1
(AY336423) Symplocos laeteviridis isolate RSlaetiviridisA340... 48 1.2 1
(AY336422) Symplocos stellaris isolate RSstellaris301 riboso... 48 1.2 1
(AY336421) Symplocos grandis isolate RSgrandis305 ribosomal ... 48 1.2 1
(AY336420) Symplocos glandulifera isolate RSglanduliferaC4 r... 48 1.2 1
(AY336419) Symplocos nokoensis isolate RSnokoensis66710 ribo... 48 1.2 1
(AY336418) Symplocos sumuntia isolate RSsumuntia302 ribosoma... 48 1.2 1
(AY336417) Symplocos sumuntia isolate RSsumuntia1 ribosomal ... 48 1.2 1
(AY336416) Symplocos pseudobarberina isolate RSpseudobarberi... 48 1.2 1
(AY336415) Symplocos mollifolia isolate RSmollifoliaC5 ribos... 48 1.2 1
(AY336414) Symplocos pyrifolia isolate RSpyrifoliaA3420 ribo... 48 1.2 1
(AY336413) Symplocos adenophylla isolate RSadenophylla5 ribo... 48 1.2 1
(AY336412) Symplocos euryoides isolate RSeuryoidesA3 ribosom... 48 1.2 1
(AY336411) Symplocos ovatilobata isolate RSovatilobataA4 rib... 48 1.2 1
(AY336410) Symplocos viridissima isolate RSviridissima3 ribo... 48 1.2 1
(AY336409) Symplocos tricoccata isolate RStricoccataA3422 ri... 48 1.2 1
(AY336408) Symplocos dryophila isolate RSdryophilaA2711 ribo... 48 1.2 1
(AY336407) Symplocos dryophila isolate RSdryophila365 riboso... 48 1.2 1
(AY336406) Symplocos dryophila isolate RSdryophila361 riboso... 48 1.2 1
(AY336405) Symplocos tetragona isolate RStetragona304 riboso... 48 1.2 1
(AY336404) Symplocos setchuensis isolate RSsetchuensis303 ri... 48 1.2 1
(AY336403) Symplocos phyllocalyx isolate RSphyllocalyx307 ri... 48 1.2 1
(AY336402) Symplocos phyllocalyx isolate RSphyllocalyx360 ri... 48 1.2 1
(AY336400) Symplocos panamensis isolate RSpanamensisA3712 ri... 48 1.2 1
(AY336399) Symplocos limoncillo isolate RSlimoncilloA3711 ri... 48 1.2 1
(AY336398) Symplocos fuscata isolate RSfuscataA2707 ribosoma... 48 1.2 1
(AY336397) Symplocos hintonii isolate RShintoniiA3406 riboso... 48 1.2 1
(AY336396) Symplocos austin-smithii isolate RSaustinsmithiiA... 48 1.2 1
(AY336395) Symplocos tacanensis isolate RStacanensis344 ribo... 48 1.2 1
(AY336394) Symplocos hartwegii isolate RShartwegii358 riboso... 48 1.2 1
(AY336393) Symplocos berteroi isolate RSberteroiA3703 riboso... 48 1.2 1
(AY336392) Symplocos micrantha isolate RSmicantha12511 ribos... 48 1.2 1
(AY336391) Symplocos domingensis isolate RSdomingensisA5202 ... 48 1.2 1
(AY336390) Symplocos wikstroemiifolia isolate RSwikstroemiif... 48 1.2 1
(AY336389) Symplocos tinctoria isolate RStinctoria67504 ribo... 48 1.2 1
(AY336388) Symplocos longipes isolate RSlongipesA8705 riboso... 48 1.2 1
(AY336387) Symplocos guadeloupensis isolate RSguadaloupensis... 48 1.2 1
(AY336386) Symplocos lanceolata isolate RSlanceolataA3405 ri... 48 1.2 1
(AY336385) Symplocos crenata isolate RScrenataA3401 ribosoma... 48 1.2 1
(AY336384) Symplocos phaeoclados isolate RSphaeocladosA3417 ... 48 1.2 1
(AL929055) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 48 1.2 1
(AC230936) Bos taurus clone CH240-495B23, WORKING DRAFT SEQU... 48 1.2 1
(AC166818) Mus musculus chromosome 15 clone RP24-388H22, ***... 48 1.2 1
(AZ427819) 1M0210K03F Mouse 10kb plasmid UUGC1M library Mus ... 48 1.2 1
(FH670399) CHO_OF5029xi15f1.ab1 CHO_OF5 Nicotiana tabacum ge... 48 1.2 1
(EK286399) 1095462314434 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.2 1
(EJ812682) 1093017498459 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.2 1
(EJ302337) 1095390036455 Global-Ocean-Sampling_GS-27-01-01-1... 48 1.2 1
(BZ427928) BONOE95TR BO_1.6_2_KB_tot Brassica oleracea genom... 48 1.2 1
(BH971979) odf84c04.g1 B.oleracea002 Brassica oleracea genom... 48 1.2 1
(CU620726) Theobroma cacao, mRNA sequence (KZ0AAA5YN17FM1). 48 1.2 1
(AA249085) m1856.seq.F Human fetal heart, Lambda ZAP Express... 48 1.2 1
(AX344550) Sequence 1 from Patent WO0200932. 38 1.2 18
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 34 1.3 22
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 34 1.3 22
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g... 38 1.3 18
(AC146650) Medicago truncatula clone mth2-14j5, complete seq... 44 1.4 8
(DX481180) Cpl22833 Papaya Genomic DNA BAC Library Carica pa... 44 1.4 2
(AC189395) Brassica rapa subsp. pekinensis clone KBrB055K07,... 32 1.4 10
(AB208705) Bombyx mori gene for trehalase-2, intron 12, exon... 36 1.4 2
(EL505684) H05_1763_302.AB1 Blood stage Plasmodium falciparu... 34 1.4 3
(AF240628) Homo sapiens chromosome 21 clone B292N6 map 21q21... 34 1.4 12
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 30 1.4 14
(EU626443) Gossypioides kirkii clone BAC 096G05, complete se... 34 1.4 10
(CR450711) Zebrafish DNA sequence from clone DKEY-183I3 in l... 42 1.4 14
(FP067412) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 1.5 5
(AC019584) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 38 1.5 8
(AC212630) Solanum lycopersicum chromosome 7 clone C07HBa011... 32 1.5 11
(FB571359) Sequence 226 from Patent EP1865317. 32 1.5 16
(AC073207) Homo sapiens chromosome 3 clone RP11-382L10, WORK... 38 1.5 13
(FC572829) CAXP10114.rev CAXP Lottia gigantea from head, foo... 32 1.5 4
(FC570556) CAWF9059.rev CAWF Lottia gigantea from mantle (H)... 32 1.6 4
(FC566729) CAWF6721.rev CAWF Lottia gigantea from mantle (H)... 32 1.6 4
(FC571281) CAWF9511.rev CAWF Lottia gigantea from mantle (H)... 32 1.6 4
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35... 34 1.7 13
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 1.7 21
(AE000783) Borrelia burgdorferi B31, complete genome. 40 1.7 16
(FC696981) CAXX5848.rev CAXX Lottia gigantea from male gonad... 32 1.7 4
(FC589959) CAXP5769.rev CAXP Lottia gigantea from head, foot... 32 1.7 4
(FC839135) CBHI8157.fwd CBHI Metridium senile tentacle Metri... 36 1.7 2
(BX120001) Zebrafish DNA sequence from clone CH211-217J8 in ... 34 1.7 11
(CP000048) Borrelia hermsii DAH, complete genome. 32 1.7 24
(AF034719) Gracilaria chilensis plasmid Gch7220, complete se... 42 1.8 3
(FC837193) CBHI7073.rev CBHI Metridium senile tentacle Metri... 36 1.8 2
(FC837194) CBHI7073.fwd CBHI Metridium senile tentacle Metri... 36 1.8 2
(ET810627) CHO_OF719xi09r1.ab1 CHO_OF Nicotiana tabacum geno... 40 1.8 2
(AL844506) Plasmodium falciparum chromosome 7. 34 1.8 17
(CP000976) Borrelia duttonii Ly, complete genome. 32 1.8 23
(FC695267) CAXX4875.rev CAXX Lottia gigantea from male gonad... 32 1.8 4
(AC138199) Medicago truncatula chromosome 6 clone mth2-15g10... 32 1.9 12
(FC698217) CAXX6930.rev CAXX Lottia gigantea from male gonad... 32 1.9 4
(AM443320) Vitis vinifera contig VV78X142727.3, whole genome... 34 1.9 4
(CZ757213) OC__Ba0109F23.f OC__Ba Oryza coarctata genomic cl... 36 1.9 3
(CU463886) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.9 9
(FC679197) CAXX13030.rev CAXX Lottia gigantea from male gona... 32 1.9 4
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI... 32 1.9 15
(AZ670113) ENTKV94TF Entamoeba histolytica Sheared DNA Entam... 40 2.0 3
(BX001036) Zebrafish DNA sequence from clone CH211-155G22 in... 38 2.0 7
(DX405371) GR_Sa0005O07.b1 Gossypium raimondii WGS library G... 40 2.0 3
(CU466299) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 2.0 10
(AC163680) Mus musculus BAC clone RP24-111M15 from chromosom... 44 2.1 9
(AZ683223) ENTIE33TR Entamoeba histolytica Sheared DNA Entam... 40 2.2 3
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 36 2.2 21
(AF303741) Chilo iridescent virus complete genome. 36 2.2 13
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 40 2.3 16
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 34 2.3 21
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 34 2.3 16
(BX294186) Zebrafish DNA sequence from clone DKEY-170O10 in ... 34 2.3 10
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 2.3 18
(AP006361) Lotus japonicus genomic DNA, chromosome 6, clone:... 42 2.3 6
(CK766773) ltu01-11ms3-g05 Ltu01 Liriodendron tulipifera cDN... 30 2.3 4
(CU571239) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 2.4 2
(AJ294725) Astasia longa complete chloroplast genome. 32 2.5 9
(CR751563) Zebrafish DNA sequence from clone CH211-203C10 in... 38 2.6 7
(AL355003) Human DNA sequence from clone RP11-753M10 on chro... 36 2.7 8
(AC214419) Populus trichocarpa clone POP109-H02, complete se... 46 2.7 8
(ES220463) MpGnorm_ag6_L01 Myzus persicae, tobacco lineage, ... 38 2.8 3
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 36 2.9 12
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 34 2.9 21
(AZ669829) ENTGV15TF Entamoeba histolytica Sheared DNA Entam... 32 3.1 2
(CT208401) Sus scrofa genomic clone CH242-78H23, genomic sur... 32 3.1 2
(AL035477) Plasmodium falciparum MAL4P4. 30 3.2 18
(AJ235271) Rickettsia prowazekii strain Madrid E, complete g... 34 3.2 16
(AC232548) Brassica rapa subsp. pekinensis clone KBrH010J09,... 34 3.2 8
(CR932979) Zebrafish DNA sequence from clone CH211-80M8 in l... 36 3.2 10
(CP000395) Borrelia afzelii PKo, complete genome. 32 3.2 24
(AC146590) Medicago truncatula chromosome 8 clone mth2-145p1... 36 3.2 9
(AC208367) Populus trichocarpa clone JGIACSB21-D10, complete... 36 3.3 7
(BX548041) Zebrafish DNA sequence from clone CH211-223G17 in... 36 3.3 7
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 32 3.4 15
(Z68879) Caenorhabditis elegans Cosmid K08F4. 40 3.4 5
(AC023272) Homo sapiens chromosome 8 clone RP11-139G7, WORKI... 34 3.4 12
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 3.4 13
(ES222408) MpGVN_ag3_K22 Myzus persicae, line G006, PLRV fre... 38 3.5 3
(AX345201) Sequence 272 from Patent WO0200928. 32 3.5 5
(AX344559) Sequence 10 from Patent WO0200932. 32 3.6 17
(CU041262) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 3.7 8
(CU459035) Medicago truncatula chromosome 5 clone mth2-57p20... 32 4.0 8
(DQ073916) Adoxophyes honmai mitochondrion, complete genome. 32 4.0 6
(FF102905) CPAD-aad60b02.b1 PB2801_EST_CPAD1 Caenorhabditis ... 40 4.1 2
(AC180618) Strongylocentrotus purpuratus clone R3-3092C20, W... 34 4.1 8
(AF288092) Naegleria gruberi mitochondrial DNA, complete gen... 36 4.1 6
(AC202369) Medicago truncatula clone mth2-74h7, WORKING DRAF... 36 4.2 8
(EI835429) POTJ802TF Solanum tuberosum RHPOTKEY BAC ends Sol... 38 4.3 3
(BX005343) Zebrafish DNA sequence from clone DKEY-29F2 in li... 38 4.3 9
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 32 4.4 13
(U11584) Drosophila melanogaster Oregon-R mitochondrial A+T ... 34 4.5 5
(AC189490) Brassica rapa subsp. pekinensis clone KBrB084K23,... 34 4.5 8
(AM444646) Vitis vinifera contig VV78X186789.15, whole genom... 30 4.7 5
(CR522883) Zebrafish DNA sequence from clone CH211-120K24 in... 46 4.7 1
(AC161521) Mus musculus chromosome 19, clone RP24-124P14, co... 46 4.7 1
(AC154768) Mus musculus BAC clone RP24-444E21 from chromosom... 46 4.7 1
(AC200631) Pongo abelii BAC clone CH276-393C15 from chromoso... 46 4.7 1
(AB173267) Macaca fascicularis brain cDNA clone: QflA-21782,... 46 4.7 1
(AM476140) Vitis vinifera, whole genome shotgun sequence, co... 46 4.7 1
(AC184063) Populus trichocarpa clone Pop1-108K13, complete s... 46 4.7 1
(CR956363) Pig DNA sequence from clone CH242-60A21 on chromo... 46 4.7 1
(AY487171) Armigeres subalbatus prophenoloxidase III mRNA, c... 46 4.7 1
(AC158226) Mus musculus chromosome 5 clone RP23-160L6 map 5,... 46 4.7 1
(AC156706) Bos taurus clone CH240-56P12, WORKING DRAFT SEQUE... 46 4.7 1
(AC142973) Macaca mulatta clone CH250-267G13, *** SEQUENCING... 46 4.7 1
(AC138551) Danio rerio strain Tue clone CH211-31C22, WORKING... 46 4.7 1
(AC113537) Mus musculus clone RP23-88P17, WORKING DRAFT SEQU... 46 4.7 1
(CU694873) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.7 1
(AC230496) Bos taurus clone CH240-507A15, WORKING DRAFT SEQU... 46 4.7 1
(AC197857) Macaca mulatta clone CH250-248G8, WORKING DRAFT S... 46 4.7 1
(AC191436) Macaca mulatta clone CH250-139I14, WORKING DRAFT ... 46 4.7 1
(AC191243) Macaca mulatta clone CH250-123P9, WORKING DRAFT S... 46 4.7 1
(AC172577) Bos taurus clone CH240-266I21, WORKING DRAFT SEQU... 46 4.7 1
(FH444947) CHO_OF4698xg11f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 4.7 1
(FH067387) CHO_OF3023xf14r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 4.7 1
(ET082236) QM0AAC3BD07FM1 CCH3 Citrus clementina genomic clo... 46 4.7 1
(EJ846449) 1093017858424 Global-Ocean-Sampling_GS-30-02-01-1... 46 4.7 1
(DU003802) 286651 Tomato MboI BAC Library Solanum lycopersic... 46 4.7 1
(CW833874) OP__Ba0093C19.r OP__Ba Oryza punctata genomic clo... 46 4.7 1
(CT367148) Sus scrofa genomic clone CH242-50P23, genomic sur... 46 4.7 1
(CR209160) Reverse strand read from insert in 5'HPRT inserti... 46 4.7 1
(CC844665) NDL.104I17.T7 Notre Dame Liverpool Aedes aegypti ... 46 4.7 1
(CX250737) 1303003 NCCCWA 02RT Oncorhynchus mykiss cDNA clon... 46 4.7 1
(AL379461) Medicago truncatula EST MtBB45E02R1 : T7 end of c... 46 4.7 1
(GE905799) 1112997722503 BABEVCEREB-C-01-1-7KB Papio anubis ... 46 4.7 1
(GE869609) 1112870092659 BABEVCEREB-C-01-1-7KB Papio anubis ... 46 4.7 1
(EY676354) CS00-C1-401-021-G04-CT.F Sweet orange leaf, infec... 46 4.7 1
(AM263198) Listeria welshimeri serovar 6b str. SLCC5334 comp... 46 4.7 1
(Z98547) Plasmodium falciparum MAL3P3. 36 4.7 10
(AY218841) Danio rerio clone BUSM1-81J4 brahma protein-like ... 32 4.7 7
(AP008995) Bombyx mori genomic DNA, chromosome 7, BAC clone:... 34 4.7 9
(AC232073) Solanum tuberosum strain Diploid genotype RH89-03... 40 4.8 7
(FP015912) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 4.8 7
(AM463170) Vitis vinifera, whole genome shotgun sequence, co... 34 4.8 7
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 38 4.9 5
(CV177257) PANORPA3POLYT_H07_1_060 Panorpa vulgaris cDNA Pan... 42 4.9 2
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com... 34 5.4 21
(AC147501) Medicago truncatula chromosome 8 clone mth2-12n2,... 32 5.5 11
(AC153237) Bos taurus clone CH240-24E22, WORKING DRAFT SEQUE... 38 5.7 7
(CU207253) Zebrafish DNA sequence from clone CH211-232O4. 34 5.9 8
(ED735438) GM_WBb0094G18.r GM_WBb Glycine max genomic clone ... 44 5.9 2
(AE001577) Borrelia burgdorferi B31 plasmid cp32-4, complete... 38 5.9 5
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete... 32 6.2 21
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 30 6.2 19
(AC176529) Strongylocentrotus purpuratus clone R3-3075J08, W... 34 6.3 6
(CR940353) Theileria annulata genomic DNA chromosome 4. 34 6.4 20
(CU798328) A BAC library has been constructed from PN40024 g... 44 6.5 2
(CC006037) PUEAX33TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 36 6.5 2
(EK294341) 1095462341851 Global-Ocean-Sampling_GS-31-01-01-1... 34 6.5 3
(AB087494) Anthoceros formosae chloroplast chlL mRNA for pro... 34 6.7 3
(FP101908) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 6.7 7
(DW255176) UI-S-GB1-aaj-l-13-0-UI.s1 UI-S-GB1 Euprymna scolo... 38 6.7 2
(BH134657) ENTOT13TR Entamoeba histolytica Sheared DNA Entam... 34 6.8 3
(AC161937) Pan troglodytes BAC clone CH251-441C24 from chrom... 40 7.0 8
(BX510906) Zebrafish DNA sequence from clone CH211-203M24 in... 36 7.1 8
(AY160094) Dictyostelium discoideum nucleotide exchange fact... 32 7.2 5
(EK525582) 1095515640417 Global-Ocean-Sampling_GS-32-01-01-1... 40 7.3 2
(AC174796) Teramnus labialis clone tl1-74n2, WORKING DRAFT S... 36 7.4 11
(DU919300) 338837 Tomato EcoRI BAC Library Solanum lycopersi... 36 7.4 2
(EJ957662) 1093018981513 Global-Ocean-Sampling_GS-30-02-01-1... 40 7.5 2
(AM441826) Vitis vinifera contig VV78X128777.16, whole genom... 34 7.5 5
(BX323543) Zebrafish DNA sequence from clone DKEYP-67E1 in l... 36 7.6 9
(AZ530133) ENTCH15TF Entamoeba histolytica Sheared DNA Entam... 40 7.6 2
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 7.7 15
(AC103987) Homo sapiens chromosome 18, clone RP11-268I9, com... 34 7.7 8
(DU970794) 380529 Tomato MboI BAC Library Solanum lycopersic... 36 7.8 2
(AC168539) Strongylocentrotus purpuratus clone R3-3091L23, W... 34 8.0 10
(BX284664) Zebrafish DNA sequence from clone DKEY-7I23 in li... 34 8.0 11
(AC188856) Phakopsora pachyrhizi clone JGIAFNA-153B9, comple... 44 8.0 3
(AF034721) Gracilaria chilensis plasmid Gch3937, complete se... 42 8.0 2
(BH150360) ENTPS36TF Entamoeba histolytica Sheared DNA Entam... 40 8.1 2
(EJ916091) 1093018560767 Global-Ocean-Sampling_GS-30-02-01-1... 30 8.1 4
(AC225495) Medicago truncatula clone mth2-47e17, WORKING DRA... 32 8.1 9
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 32 8.1 15
(AC177472) Strongylocentrotus purpuratus clone R3-61F12, WOR... 30 8.1 12
(EJ245466) 1095335017273 Global-Ocean-Sampling_GS-27-01-01-1... 36 8.2 2
(AM434358) Vitis vinifera contig VV78X011330.4, whole genome... 28 8.2 5
(CL994411) ZMMBHf0006h11.r ZMMBHf Zea mays genomic clone ZMM... 36 8.4 2
(CR855266) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 32 8.4 2
(AC164094) Mus musculus BAC clone RP23-133F10 from chromosom... 32 8.4 2
(AE017261) Picrophilus torridus DSM 9790, complete genome. 36 8.5 21
(AC184213) Strongylocentrotus purpuratus clone R3-25K5, WORK... 34 8.5 8
(CR383669) Zebrafish DNA sequence from clone DKEY-25O1 in li... 38 8.5 9
(AC140334) Mus musculus BAC clone RP23-244J7 from chromosome... 32 8.5 2
(AC121775) Mus musculus BAC clone RP23-356B13 from chromosom... 32 8.5 2
(AC005714) Drosophila melanogaster clone BACR48M13, complete... 34 8.5 2
(AC008349) Drosophila melanogaster, chromosome 2R, region 58... 34 8.6 2
(DD061484) Methods and nucleic acids for the analysis of he... 30 8.6 6
(DD061338) Methods and nucleic acids for the analysis of he... 30 8.6 6
(AX599046) Sequence 386 from Patent WO02077272. 30 8.6 6
(AX598900) Sequence 240 from Patent WO02077272. 30 8.6 6
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49... 30 8.6 16
(CU306817) Zebrafish DNA sequence from clone CH211-266G18 in... 36 8.7 10
(CR524826) Zebrafish DNA sequence from clone CH211-227A6 in ... 32 8.7 2
(AC168846) Strongylocentrotus purpuratus clone R3-13A6, WORK... 32 8.8 9
(EF621724) Papilio xuthus mitochondrion, partial genome. 30 8.8 7
(AC020220) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 34 8.9 2
(Z97352) Human DNA sequence from clone RP3-341I10 on chromos... 32 8.9 2
(CP000382) Clostridium novyi NT, complete genome. 34 9.0 21
(AC010710) Drosophila melanogaster chromosome 3L/? clone RPC... 34 9.0 2
(AC180989) Strongylocentrotus purpuratus clone R3-3058M24, W... 36 9.0 10
(AC215897) Populus trichocarpa clone POP034-F24, complete se... 42 9.1 9
(AL929298) Zebrafish DNA sequence from clone CH211-79E7. 32 9.3 13
(AC180488) Strongylocentrotus purpuratus clone R3-3100A02, W... 38 9.4 8
(AM628580) Entamoeba dispar GSS, clone dispar2b01.q1k. 30 9.6 4
(AC017070) Homo sapiens BAC clone RP11-409F2 from 2, complet... 44 9.6 5

>(BJ373010) Dictyostelium discoideum cDNA clone:ddc15f12, 3' end,
single read.
Length = 632

Score = 940 bits (474), Expect(2) = 0.0
Identities = 480/483 (99%)
Strand = Plus / Minus


Query: 1012 atttaggtgaaactttatataatggtccatgttttgaaatgaaatcaaatggcattaaca 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 atttaggtgaaactttatataatggtccatgttttgaaatgaaatcaaatggcattaaca 572


Query: 1072 ccgccaccaccagtggtaatgatgacggtagtgatttatatatttatgatggtacaaatg 1131
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ccgccaccaccagtggtaatnatgacggtagtgatttatatatttatgatggtacaaatg 512


Query: 1132 taatttataaaggtagcttaagtccaaaaagtaatggtggatatattcgtgatttaccaa 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 taatttataaaggtagcttaagtccaaaaagtaatggtggatatattcgtgatttaccaa 452


Query: 1192 tggtgtataatgaaagtaaagcatatacaattaaagaatttgacgtttcaacaagtgatt 1251
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 451 tggtgtataatgaaagtaaagcatatacaattaaanaatttgacgtttcaacaagtgatt 392


Query: 1252 tatattattcaaatcaatttgataaaaaattatattcaatttcattatcaaatacatttg 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tatattattcaaatcaatttgataaaaaattatattcaatttcattatcaaatacatttg 332


Query: 1312 gaccaaagaaaactattttatcagatttaccaacttcttttaaatattataatgatttca 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaccaaagaaaactattttatcagatttaccaacttcttttaaatattataatgatttca 272


Query: 1372 tttattattcattaaatggtaaaatttcaagaattaatgttaatacaggtttaaatgaaa 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tttattattcattaaatggtaaaatttcaagaattaatgttaatacaggtttaaatgaaa 212


Query: 1432 ttttatttgattcaaatttaaataaaagtcattgtatttgtgctcaaggttttacgggtg 1491
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 211 ttttatttgattcaaatttaaataaaagtcnttgtatttgtgctcaaggttttacgggtg 152


Query: 1492 att 1494
|||
Sbjct: 151 att 149

Score = 167 bits (84), Expect(2) = 0.0
Identities = 106/115 (92%)
Strand = Plus / Minus


Query: 1496 catgtgatcattgtgatcaatcaaataatttaatatcttgggtaaaaggtattccaagat 1555
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 148 catgtgatcattgtgatcaatcaaataatttaatatcttgggtaaatggtattccaagat 89


Query: 1556 gtataccattaacaaatgatggtaatccaataacttgtgattttaattatcaatg 1610
||||||||||||||||||||||| ||||| | |||||| ||||||||||||
Sbjct: 88 gtataccattaacaaatgatggtgatccanntncatgtgatnntaattatcaatg 34

Score = 54.0 bits (27), Expect = 0.019
Identities = 27/27 (100%)
Strand = Plus / Minus


Query: 974 gatttaggtgaaactttatataatggt 1000
|||||||||||||||||||||||||||
Sbjct: 632 gatttaggtgaaactttatataatggt 606

Score = 54.0 bits (27), Expect = 0.019
Identities = 27/27 (100%)
Strand = Plus / Minus


Query: 474 gatttaggtgaaactttatataatggt 500
|||||||||||||||||||||||||||
Sbjct: 632 gatttaggtgaaactttatataatggt 606

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,565,269,713
Number of extensions: 168916681
Number of successful extensions: 14996217
Number of sequences better than 10.0: 501
Length of query: 1849
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1825
Effective length of database: 96,409,374,237
Effective search space: 175947107982525
Effective search space used: 175947107982525
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Contig-U15846-1Q.Seq.d
(1849 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC114263_28(AC114263|pid:none) Dictyostelium discoideum chromoso... 59 5e-07
AY392438_1(AY392438|pid:none) Dictyostelium discoideum tenascin ... 39 0.001
CP000557_2523(CP000557|pid:none) Geobacillus thermodenitrificans... 44 0.015
CP000962_1769(CP000962|pid:none) Clostridium botulinum A3 str. L... 40 0.38
CP000939_1706(CP000939|pid:none) Clostridium botulinum B1 str. O... 39 0.49
CP000728_1668(CP000728|pid:none) Clostridium botulinum F str. La... 39 0.49
CP000939_412(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 38 1.1
BA000043_2636(BA000043|pid:none) Geobacillus kaustophilus HTA426... 38 1.1
AM412317_1767(AM412317|pid:none) Clostridium botulinum A str. AT... 38 1.1
CP001083_1873(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 38 1.4
CP001581_394(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 37 2.4
CP000246_111(CP000246|pid:none) Clostridium perfringens ATCC 131... 37 2.4
CP000728_385(CP000728|pid:none) Clostridium botulinum F str. Lan... 37 2.4
AM412317_382(AM412317|pid:none) Clostridium botulinum A str. ATC... 37 2.4
CU928158_1111(CU928158|pid:none) Escherichia fergusonii ATCC 354... 36 4.2
CP000923_989(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 36 5.5
AL445563_256(AL445563|pid:none) Mycoplasma pulmonis (strain UAB ... 27 6.6
AL844505_35(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 35 7.1
BX571662_170(BX571662|pid:none) Wolinella succinogenes, complete... 35 7.1
AL844509_625(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 28 8.0
CP000962_387(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 35 9.3
BA000026_1019(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, ... 35 9.3
AE001438_3(AE001438|pid:none) Clostridium acetobutylicum ATCC 82... 35 9.3
(P10382) RecName: Full=Protein D5; &S01975(S01975) &X13273_1(X1... 35 9.3

>AC114263_28(AC114263|pid:none) Dictyostelium discoideum chromosome 2
map 215673-367476 strain AX4, complete sequence.
Length = 366

Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Frame = +3

Query: 1125 TNVIYKGSLSPKSNGGYIRDLPMVYNESKAYTIKEFDVSTSDLYYSNQFDKKLYSISLSN 1304
TN + S++ +N + LP+ Y+ Y EFD+S+S YYS+ F+K++Y + N
Sbjct: 249 TNNFNQSSINNNNNIKNVLQLPIFYSNKNMY---EFDISSSHFYYSDWFEKRIYRYPIRN 305

Query: 1305 -----TFGPKKTILSDLPTSFKYYNDFIYYSLNGKISRINVNTGLNEILFDSNLNKSHCI 1469
TF K+ I LP SF Y+N+++Y S I IN+N+ E + +S+
Sbjct: 306 GIIDQTF--KQMIFYYLPISFHYFNNYLYLSF-PNIYSINLNSKNVEFQLTDHFIQSNYY 362

Query: 1470 C 1472
C
Sbjct: 363 C 363

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,768,197,401
Number of extensions: 56330427
Number of successful extensions: 140743
Number of sequences better than 10.0: 24
Number of HSP's gapped: 140670
Number of HSP's successfully gapped: 30
Length of query: 616
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 481
Effective length of database: 614,245,399
Effective search space: 295452036919
Effective search space used: 295452036919
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.82 gvh: 0.36 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.26 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
28.0 %: nuclear
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: plasma membrane
4.0 %: peroxisomal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U15846-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 3
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 4
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0