Contig-U15844-1
Contig ID Contig-U15844-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15844-1 (Contig-U15844-1Q) /CSM_Contig/Contig-U15844-1Q.Seq.d
GACATTAAAAAATATTATTTGAATAATTTGAGTTTAACAAGTTTTTAGAA
TAAATCATTTCTAGTTACCATTCCAACTACCTCGTTGTTTATATCAACTT
TAATATTTTTAAAATTAAATAAATAAAAAATTTAAAAGAAGACAAGTATT
AGAATGATGATTATATAAATTTTTATAAAATAAAATTAATTTTTTTTTTT
TTTTAAAAAATAAAAAAATTAAAAATTAAAAAACTTACTAACTGGTAAAT
GTCTTAAACCCATATTTNTAAATAATTTATAAGCTTCAACAAATGAAAAT
ATTTACATACATGGTCTTAAATCAATAAAAGAATCTAATTCAAATTGATC
AAAATTCATTTCANATAAAGGNGGNGGACTTTTTGAGGTTTCTGTTGTAA
ATTTATCAAAGTCAAAATTTTCATNTAAATAAATCTNTTCACCGGTNCCT
NTATAGAATACACGATAAAAGAGTAGTACCAAAATATGATCTNTAAGAAT
GATNCCTCGGTAAAGTCTTTGATTATCATATGGACCACTATTGATAACAG
GGAAAGCATTATGATTATTTGAATTTAAAATGTTGACCAATAGTCTAACT
TGGCA----------GAAAAAACAAATCGATACTCAAATAAATAAATATA
TAAAAGTTTTATTATTTACTCTATATATAATTTTTAAAAGATGGGATCAT
CATTAAATAAACCCTTATCAGATAGGGTGGAAGATATAAATAATCAATCA
TCAATGATATATGACCCATGGAGACACAGAGGTGATGTAAATTCAACCTA
TCATTCATCATCATCGGTTACACATAGAAGAAGGAATCATAGGCTATCGC
CTCTAGAAAAACAAAAAATGAAAAATATACAAAGTTTAAATTTTAGTGTA
AATGATAATCTTTTACAAAGAGAAGAATATGAAAAAACAACAAAAGGGCT
TCATTTAAAAAAAACATTTGGTAAATGGATTATATGTTTATTTTTAGGTG
TTATAGTTGGATGTATAGCATATGTAATTAAAATGGTTGTTCAATTACTT
CAAGGTTTAAAATTTCATTATACAAATCATTATGTATCAAATGGATTACA
AGGTGAAGCATTTTTAACATTTTTAGGTATAAATTTATTATTTGTATTTT
TATCATGTTTAATGGTGATAGTGGCAGGACCATTAGCAAGTAGTTCAGGT
ATACCAGAAGTTAAAGGAATTTTAAATGGTGTTAAAGTTAGAGAAGCATT
AGGATTTAGAGCATTATTAGGAAAGATTGTATCATTGGTACTATCATTTT
CATCTGGATTATTTGTTGGACCTGAGGGACCAATGATTCATATTGGATCA
GCAGTTGGTGCTGCCATTAGTCAATTTAAGTCATCGACAATGGGTTTCTA
TCCATCGTTATTCCTTTCCTATAGAAACGATAGAGATAAGAGAGATTTCA
TTTCAATTGGTGCAGCCACTGGGCTGGCAGCAGCATTTGGTGCACCCATT
GGCGGCGTTTTATTTTCAATTGAAGAGGTATCATCATTTTGGTCACGTCA
ATTAACTTGGAGAACATTTTTCACTTGTGTTATAGCAGCATTCACAACCA
ATTTCCTTTTACAAGGTATTGGTTCGTCACCTGATATGCATGATACTGGT
TTACTCACTTTTGGTTTCTCAAGACTCTATCTATTTAGGTATTCAGAATT
ATTATGTTTTTGTTTCTTGGGTTTAATTGGTGGTTTGTTAGGTGCATTCT
TTGTGTTTTTAAATATACATTTAAACAAATGGAGAAAAGAAAAATTAAAA
CAAAATCCTTATTTAAGATTATTCGAAGCATTGTTTGTAAGTGTTGTAAC
ATCTGTAGTTTGTTATTATGCCTCTTTTATATTTGATTGTAGATACCAAT
CGAATATTGTCATTGAAACTAGTGTTTGTGAAGATCAATCGAATACTGAA
ATGGTGCAATTCTTTTGTCCACCATTATTAGTGTTTACATTGATTTCATT
ATTTTTTTCAATTTGGTCAAGTGGTTTATGGGTCGCAGGTGGACTTTTTG
TACCAATGATGATGGTTGGTGCAGGATTTGGTAGGTTATTCGGTCAAACC
ATTTCAATGTGGTTCACAAATATTGATAGTAGTATTTATGCATTGGTAGG
TTCAGCTGCAATGATGGCTGGTTATTGTAGGATGACCGTTTGTATAGTGG
TAATCATGGTTGAACTAACTGAAGGTACACAATATTTAGTACCAATCATT
TTGGCAGTAATGATATNTAAANGGGTTGGNGACTTTTTTAATGAATCAGT
TTATGAACATTTAATGGAACANAAATCAATACCATTCTTACAATCCAAAC
CACCCCNTTCAACGAATAACA

Gap gap included
Contig length 2361
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 5
Number of EST 7
Link to clone list U15844
List of clone(s)

est1=CFI611F,1,240
est2=CFF620F,2,605
est3=AHF752F,606,1156
est4=VHE257F,806,1423
est5=CFI611Z,1110,1387
est6=CFF620Z,1217,2360
est7=VHD590Z,1367,1733
Translated Amino Acid sequence
dikkyylnnlsltsf*nksflvtipttslfistliflklnk*ki*kktsirmmii*ifik
*n*fffffkk*kn*klknlltgkclkpifxnnl*astneniyihglksikesnsn*skfi
sxkggglfevsvvnlskskfsxk*ixspvpx*ntr*ksstki*sxrmxpr*sl*lsygpl
litgkal*LFEFKMLTNSLTW---

---KKQIDTQINKYIKVLLFTLYIIFKRWDHH*inpyqigwki*iinhq*ymthgdtevm
*iqpiihhhrlhieegiigyrl*knkk*kiykv*ilv*miifykeknmkkqqkgfi*kkh
lvnglyvyf*vl*ldv*hm*lkwlfnyfkv*nfiiqiimyqmdykvkhf*hf*v*iyyly
fyhv*w**wqdh*qvvqvyqklkef*mvlklekh*dlehy*erlyhwyyhfhldylldlr
dq*fildqqlvlplvnlshrqwvsihrysfpietieireisfqlvqplgwqqhlvhplaa
fyfqlkryhhfghvn*lgehfslvl*qhsqpisfykvlvrhlicmilvysllvsqdsiyl
giqnyyvfvswv*lvvc*vhslcf*iyi*tngekkn*nkili*dyskhcl*vl*hl*fvi
mpllylivdtnrilslklvfvkinrilkwcnsfvhhy*clh*fhyffqfgqvvygsqvdf
lyq**wlvqdlvgysvkpfqcgsqilivvfmhw*vqlq*wlvivg*pfv*w*swln*lkv
hni*yqsfwq**yxxglxtflmnqfmni*wnxnqyhsynpnhpxqrit


Translated Amino Acid sequence (All Frames)
Frame A:
dikkyylnnlsltsf*nksflvtipttslfistliflklnk*ki*kktsirmmii*ifik
*n*fffffkk*kn*klknlltgkclkpifxnnl*astneniyihglksikesnsn*skfi
sxkggglfevsvvnlskskfsxk*ixspvpx*ntr*ksstki*sxrmxpr*sl*lsygpl
litgkal*LFEFKMLTNSLTW---

---ektnrysnk*iyksfiiysiynf*kmgsslnkplsdrvedinnqssmiydpwrhrgd
vnstyhssssvthrrrnhrlsplekqkmkniqslnfsvndnllqreeyekttkglhlkkt
fgkwiiclflgvivgciayvikmvvqllqglkfhytnhyvsnglqgeafltflginllfv
flsclmvivagplasssgipevkgilngvkvrealgfrallgkivslvlsfssglfvgpe
gpmihigsavgaaisqfksstmgfypslflsyrndrdkrdfisigaatglaaafgapigg
vlfsieevssfwsrqltwrtfftcviaafttnfllqgigsspdmhdtglltfgfsrlylf
rysellcfcflgliggllgaffvflnihlnkwrkeklkqnpylrlfealfvsvvtsvvcy
yasfifdcryqsnivietsvcedqsntemvqffcppllvftlislffsiwssglwvaggl
fvpmmmvgagfgrlfgqtismwftnidssiyalvgsaammagycrmtvcivvimvelteg
tqylvpiilavmixkxvgdffnesvyehlmexksipflqskppxstnn

Frame B:
tlknii*ii*v*qvfrinhf*lpfqlprclyql*yf*n*inkkfkrrqvle**lykfl*n
kinfffflknkkikn*kty*lvnvlnpyx*iiyklqqmkiftymvlnq*knliqidqnsf
xikxxdflrfll*iyqsqnfhxnksxhrxlyrihdkrvvpkydl*e*xlgkvfdyhmdhy
**qgkhydylnlkc*piv*lg---

---KKQIDTQINKYIKVLLFTLYIIFKRWDHH*inpyqigwki*iinhq*ymthgdtevm
*iqpiihhhrlhieegiigyrl*knkk*kiykv*ilv*miifykeknmkkqqkgfi*kkh
lvnglyvyf*vl*ldv*hm*lkwlfnyfkv*nfiiqiimyqmdykvkhf*hf*v*iyyly
fyhv*w**wqdh*qvvqvyqklkef*mvlklekh*dlehy*erlyhwyyhfhldylldlr
dq*fildqqlvlplvnlshrqwvsihrysfpietieireisfqlvqplgwqqhlvhplaa
fyfqlkryhhfghvn*lgehfslvl*qhsqpisfykvlvrhlicmilvysllvsqdsiyl
giqnyyvfvswv*lvvc*vhslcf*iyi*tngekkn*nkili*dyskhcl*vl*hl*fvi
mpllylivdtnrilslklvfvkinrilkwcnsfvhhy*clh*fhyffqfgqvvygsqvdf
lyq**wlvqdlvgysvkpfqcgsqilivvfmhw*vqlq*wlvivg*pfv*w*swln*lkv
hni*yqsfwq**yxxglxtflmnqfmni*wnxnqyhsynpnhpxqrit

Frame C:
h*kilfe*fefnkfle*iissyhsnylvvyinfnifkik*iknlkedky*nddyinfyki
kliffff*kikklkikkltnw*ms*thixk*fisfnk*kylhtws*inkri*fklikihf
x*rxxtf*gfcckfikvkifx*inlftgxxieytike*yqnmixkndxsvksliiiwtti
dnresimii*i*nvdq*snla---

---knksilk*ini*kfyyllyi*flkdgiiik*tlir*ggryk*siindi*pmetqr*c
kfnlsfiiigyt*kkes*aiasrktknekytkfkf*ck**sftkrri*knnkrasfkkni
w*mdymfifrcyswmysicn*ngcsitsrfkislykslcikwitr*sifnifrykfiici
fimfngdsgrtisk*frytrs*rnfkwc*s*rsiri*siirkdciigtiifiwiicwt*g
tndsywisswcch*si*vidngflsivipfl*kr*r*erfhfnwcshwagssiwcthwrr
fifn*rgiiilvtsinlenifhlcyssihnqfpftrywfvt*ya*ywfthfwflktlsi*
vfriimflflgfnwwfvrcilcvfkytfkqmekrkiktkslfkiirsivckccnicslll
clfyi*l*ipieych*n*cl*rsiey*ngaillstiisvyidfiiffnlvkwfmgrrwtf
ctnddgwcriw*virsnhfnvvhky***ylcigrfscndgwll*ddrlysgnhg*tn*ry
tifstnhfgsndx*xgwxlf**isl*tfngtxintiltiqttpfne*

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15844-1 (Contig-U15844-1Q)
/CSM_Contig/Contig-U15844-1Q.Seq.d
(2371 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15844-1 (Contig-U15844-1Q) /CSM_Contig/Conti... 2343 0.0
Contig-U15559-1 (Contig-U15559-1Q) /CSM_Contig/Conti... 96 3e-19
Contig-U16392-1 (Contig-U16392-1Q) /CSM_Contig/Conti... 40 0.015
Contig-U16035-1 (Contig-U16035-1Q) /CSM_Contig/Conti... 40 0.015
Contig-U15665-1 (Contig-U15665-1Q) /CSM_Contig/Conti... 40 0.015
Contig-U06339-1 (Contig-U06339-1Q) /CSM_Contig/Conti... 40 0.015
Contig-U04831-1 (Contig-U04831-1Q) /CSM_Contig/Conti... 40 0.015
Contig-U01974-1 (Contig-U01974-1Q) /CSM_Contig/Conti... 40 0.015
Contig-U16708-1 (Contig-U16708-1Q) /CSM_Contig/Conti... 38 0.061
Contig-U16301-1 (Contig-U16301-1Q) /CSM_Contig/Conti... 38 0.061

>Contig-U15844-1 (Contig-U15844-1Q) /CSM_Contig/Contig-U15844-1Q.Seq.d
Length = 2371

Score = 2343 bits (1182), Expect = 0.0
Identities = 1211/1218 (99%)
Strand = Plus / Plus


Query: 1154 catgtttaatggtgatagtggcaggaccattagcaagtagttcaggtataccagaagtta 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 catgtttaatggtgatagtggcaggaccattagcaagtagttcaggtataccagaagtta 1213


Query: 1214 aaggaattttaaatggtgttaaagttagagaagcattaggatttagagcattattaggaa 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 aaggaattttaaatggtgttaaagttagagaagcattaggatttagagcattattaggaa 1273


Query: 1274 agattgtatcattggtactatcattttcatctggattatttgttggacctgagggaccaa 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 agattgtatcattggtactatcattttcatctggattatttgttggacctgagggaccaa 1333


Query: 1334 tgattcatattggatcagcagttggtgctgccattagtcaatttaagtcatcgacaatgg 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 tgattcatattggatcagcagttggtgctgccattagtcaatttaagtcatcgacaatgg 1393


Query: 1394 gtttctatccatcgttattcctttcctatagaaacgatagagataagagagatttcattt 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 gtttctatccatcgttattcctttcctatagaaacgatagagataagagagatttcattt 1453


Query: 1454 caattggtgcagccactgggctggcagcagcatttggtgcacccattggcggcgttttat 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 caattggtgcagccactgggctggcagcagcatttggtgcacccattggcggcgttttat 1513


Query: 1514 tttcaattgaagaggtatcatcattttggtcacgtcaattaacttggagaacatttttca 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 tttcaattgaagaggtatcatcattttggtcacgtcaattaacttggagaacatttttca 1573


Query: 1574 cttgtgttatagcagcattcacaaccaatttccttttacaaggtattggttcgtcacctg 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 cttgtgttatagcagcattcacaaccaatttccttttacaaggtattggttcgtcacctg 1633


Query: 1634 atatgcatgatactggtttactcacttttggtttctcaagactctatctatttaggtatt 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1634 atatgcatgatactggtttactcacttttggtttctcaagactctatctatttaggtatt 1693


Query: 1694 cagaattattatgtttttgtttcttgggtttaattggtggtttgttaggtgcattctttg 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 cagaattattatgtttttgtttcttgggtttaattggtggtttgttaggtgcattctttg 1753


Query: 1754 tgtttttaaatatacatttaaacaaatggagaaaagaaaaattaaaacaaaatccttatt 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1754 tgtttttaaatatacatttaaacaaatggagaaaagaaaaattaaaacaaaatccttatt 1813


Query: 1814 taagattattcgaagcattgtttgtaagtgttgtaacatctgtagtttgttattatgcct 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 taagattattcgaagcattgtttgtaagtgttgtaacatctgtagtttgttattatgcct 1873


Query: 1874 cttttatatttgattgtagataccaatcgaatattgtcattgaaactagtgtttgtgaag 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1874 cttttatatttgattgtagataccaatcgaatattgtcattgaaactagtgtttgtgaag 1933


Query: 1934 atcaatcgaatactgaaatggtgcaattcttttgtccaccattattagtgtttacattga 1993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1934 atcaatcgaatactgaaatggtgcaattcttttgtccaccattattagtgtttacattga 1993


Query: 1994 tttcattannnnnnncaatttggtcaagtggtttatgggtcgcaggtggactttttgtac 2053
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1994 tttcattatttttttcaatttggtcaagtggtttatgggtcgcaggtggactttttgtac 2053


Query: 2054 caatgatgatggttggtgcaggatttggtaggttattcggtcaaaccatttcaatgtggt 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 caatgatgatggttggtgcaggatttggtaggttattcggtcaaaccatttcaatgtggt 2113


Query: 2114 tcacaaatattgatagtagtatttatgcattggtaggttcagctgcaatgatggctggtt 2173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 tcacaaatattgatagtagtatttatgcattggtaggttcagctgcaatgatggctggtt 2173


Query: 2174 attgtaggatgaccgtttgtatagtggtaatcatggttgaactaactgaaggtacacaat 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2174 attgtaggatgaccgtttgtatagtggtaatcatggttgaactaactgaaggtacacaat 2233


Query: 2234 atttagtaccaatcattttggcagtaatgatatntaaangggttggngacttttttaatg 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2234 atttagtaccaatcattttggcagtaatgatatntaaangggttggngacttttttaatg 2293


Query: 2294 aatcagtttatgaacatttaatggaacanaaatcaataccattcttacaatccaaaccac 2353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2294 aatcagtttatgaacatttaatggaacanaaatcaataccattcttacaatccaaaccac 2353


Query: 2354 cccnttcaacgaataaca 2371
||||||||||||||||||
Sbjct: 2354 cccnttcaacgaataaca 2371


Score = 1116 bits (563), Expect = 0.0
Identities = 623/623 (100%)
Strand = Plus / Plus


Query: 234 cttactaactggtaaatgtcttaaacccatatttntaaataatttataagcttcaacaaa 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 cttactaactggtaaatgtcttaaacccatatttntaaataatttataagcttcaacaaa 293


Query: 294 tgaaaatatttacatacatggtcttaaatcaataaaagaatctaattcaaattgatcaaa 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgaaaatatttacatacatggtcttaaatcaataaaagaatctaattcaaattgatcaaa 353


Query: 354 attcatttcanataaaggnggnggactttttgaggtttctgttgtaaatttatcaaagtc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 attcatttcanataaaggnggnggactttttgaggtttctgttgtaaatttatcaaagtc 413


Query: 414 aaaattttcatntaaataaatctnttcaccggtncctntatagaatacacgataaaagag 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aaaattttcatntaaataaatctnttcaccggtncctntatagaatacacgataaaagag 473


Query: 474 tagtaccaaaatatgatctntaagaatgatncctcggtaaagtctttgattatcatatgg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tagtaccaaaatatgatctntaagaatgatncctcggtaaagtctttgattatcatatgg 533


Query: 534 accactattgataacagggaaagcattatgattatttgaatttaaaatgttgaccaatag 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 accactattgataacagggaaagcattatgattatttgaatttaaaatgttgaccaatag 593


Query: 594 tctaacttggcannnnnnnnnngaaaaaacaaatcgatactcaaataaataaatatataa 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tctaacttggcannnnnnnnnngaaaaaacaaatcgatactcaaataaataaatatataa 653


Query: 654 aagttttattatttactctatatataatttttaaaagatgggatcatcattaaataaacc 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aagttttattatttactctatatataatttttaaaagatgggatcatcattaaataaacc 713


Query: 714 cttatcagatagggtggaagatataaataatcaatcatcaatgatatatgacccatggag 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cttatcagatagggtggaagatataaataatcaatcatcaatgatatatgacccatggag 773


Query: 774 acacagaggtgatgtaaattcaacctatcattcatcatcatcggttacacatagaagaag 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 acacagaggtgatgtaaattcaacctatcattcatcatcatcggttacacatagaagaag 833


Query: 834 gaatcataggctatcgcctctag 856
|||||||||||||||||||||||
Sbjct: 834 gaatcataggctatcgcctctag 856


Score = 414 bits (209), Expect = e-115
Identities = 225/233 (96%)
Strand = Plus / Plus


Query: 876 tatacaaagtttaaattttagtgtaaatgataatcttttacaaagagaagaatatgaaaa 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 tatacaaagtttaaattttagtgtaaatgataatcttttacaaagagaagaatatgaaaa 935


Query: 936 aacaacaaaagggcttcatttnnnnnnnncatttggtaaatggattatatgtttattttt 995
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 936 aacaacaaaagggcttcatttaaaaaaaacatttggtaaatggattatatgtttattttt 995


Query: 996 aggtgttatagttggatgtatagcatatgtaattaaaatggttgttcaattacttcaagg 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 aggtgttatagttggatgtatagcatatgtaattaaaatggttgttcaattacttcaagg 1055


Query: 1056 tttaaaatttcattatacaaatcattatgtatcaaatggattacaaggtgaag 1108
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 tttaaaatttcattatacaaatcattatgtatcaaatggattacaaggtgaag 1108


Score = 194 bits (98), Expect = 4e-49
Identities = 98/98 (100%)
Strand = Plus / Plus


Query: 1 gacattaaaaaatattatttgaataatttgagtttaacaagtttttagaataaatcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacattaaaaaatattatttgaataatttgagtttaacaagtttttagaataaatcattt 60


Query: 61 ctagttaccattccaactacctcgttgtttatatcaac 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctagttaccattccaactacctcgttgtttatatcaac 98


Score = 103 bits (52), Expect = 1e-21
Identities = 52/52 (100%)
Strand = Plus / Plus


Query: 138 gaagacaagtattagaatgatgattatataaatttttataaaataaaattaa 189
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gaagacaagtattagaatgatgattatataaatttttataaaataaaattaa 189


>Contig-U15559-1 (Contig-U15559-1Q) /CSM_Contig/Contig-U15559-1Q.Seq.d
Length = 2743

Score = 95.6 bits (48), Expect = 3e-19
Identities = 72/80 (90%)
Strand = Plus / Plus


Query: 1486 tttggtgcacccattggcggcgttttattttcaattgaagaggtatcatcattttggtca 1545
|||||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||
Sbjct: 1091 tttggtgcacccattggcggtgttttgtttggctttgaagaggcttcatcattttggtca 1150


Query: 1546 cgtcaattaacttggagaac 1565
||||||||||||||||||||
Sbjct: 1151 cgtcaattaacttggagaac 1170


Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/58 (86%)
Strand = Plus / Plus


Query: 2269 aaangggttggngacttttttaatgaatcagtttatgaacatttaatggaacanaaat 2326
||| ||||||| || || ||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 1904 aaatgggttggtgatttctttaatgaatccatttatgaacatttaattgaacagaaat 1961


Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus


Query: 1318 ggacctgagggaccaatgattcatattgga 1347
|||||||||||||| |||||||| ||||||
Sbjct: 923 ggacctgagggaccgatgattcacattgga 952


Score = 34.2 bits (17), Expect = 0.95
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 965 catttggtaaatggattatatgttt 989
|||||||||||||||| || |||||
Sbjct: 570 catttggtaaatggataatttgttt 594


Score = 32.2 bits (16), Expect = 3.8
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1193 gttcaggtataccaga 1208
||||||||||||||||
Sbjct: 798 gttcaggtataccaga 813


>Contig-U16392-1 (Contig-U16392-1Q) /CSM_Contig/Contig-U16392-1Q.Seq.d
Length = 2195

Score = 40.1 bits (20), Expect = 0.015
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 161 ttatataaatttttataaaa 180
||||||||||||||||||||
Sbjct: 37 ttatataaatttttataaaa 56


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 57,600
Number of Sequences: 8402
Number of extensions: 57600
Number of successful extensions: 8244
Number of sequences better than 10.0: 447
length of query: 2371
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2354
effective length of database: 7,932,708
effective search space: 18673594632
effective search space used: 18673594632
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2.21
Homology vs DNA
Query= Contig-U15844-1 (Contig-U15844-1Q) /CSM_Contig/Contig-U15844-1Q.Seq.d
(2371 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 1211 0.0 2
(BJ372313) Dictyostelium discoideum cDNA clone:ddc12g06, 3' ... 1205 0.0 2
(BJ420492) Dictyostelium discoideum cDNA clone:ddv39a16, 5' ... 539 0.0 4
(BJ358954) Dictyostelium discoideum cDNA clone:ddc12g06, 5' ... 642 0.0 3
(BJ333396) Dictyostelium discoideum cDNA clone:dda42h13, 5' ... 331 0.0 3
(BJ438884) Dictyostelium discoideum cDNA clone:ddv38c23, 3' ... 672 0.0 2
(BJ375258) Dictyostelium discoideum cDNA clone:ddc18e04, 3' ... 420 e-112 1
(BJ361628) Dictyostelium discoideum cDNA clone:ddc18e04, 5' ... 123 2e-69 3
(AF414428) Dictyostelium discoideum chloride channel protein... 76 3e-36 7
(BJ324669) Dictyostelium discoideum cDNA clone:dda7m11, 5' e... 76 2e-23 4
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 50 3e-07 11
(AU062156) Dictyostelium discoideum slug cDNA, clone SLH842. 58 2e-06 2
(BJ403610) Dictyostelium discoideum cDNA clone:dds25o13, 3' ... 58 0.002 1
(BJ385658) Dictyostelium discoideum cDNA clone:ddc55o13, 3' ... 58 0.002 1
(BJ358246) Dictyostelium discoideum cDNA clone:dda56c21, 3' ... 58 0.002 1
(BJ355193) Dictyostelium discoideum cDNA clone:dda56d03, 3' ... 58 0.002 1
(BJ355125) Dictyostelium discoideum cDNA clone:dda55g21, 3' ... 58 0.002 1
(BJ354499) Dictyostelium discoideum cDNA clone:dda53f23, 3' ... 58 0.002 1
(BJ354085) Dictyostelium discoideum cDNA clone:dda52p11, 3' ... 58 0.002 1
(BJ353942) Dictyostelium discoideum cDNA clone:dda52a05, 3' ... 58 0.002 1
(BJ353257) Dictyostelium discoideum cDNA clone:dda49c16, 3' ... 58 0.002 1
(BJ351366) Dictyostelium discoideum cDNA clone:dda42n21, 3' ... 58 0.002 1
(BJ350346) Dictyostelium discoideum cDNA clone:dda39d18, 3' ... 58 0.002 1
(BJ349195) Dictyostelium discoideum cDNA clone:dda35o18, 3' ... 58 0.002 1
(BJ348782) Dictyostelium discoideum cDNA clone:dda34h11, 3' ... 58 0.002 1
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 46 0.006 12
(AC146777) Medicago truncatula clone mth2-173c10, complete s... 54 0.025 1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 36 0.18 23
(DR570853) WS00727.B21_H04 WS-PS-N-A-8 Picea glauca cDNA clo... 38 0.24 2
(AM454201) Vitis vinifera contig VV79X002445.3, whole genome... 40 0.28 4
(FI117705) MUGQ_CH252P490G03Sp6_CH0188_010 CHORI-252 Vervet ... 50 0.39 1
(BJ409054) Dictyostelium discoideum cDNA clone:dds47i22, 3' ... 50 0.39 1
(BJ406480) Dictyostelium discoideum cDNA clone:dds35l10, 3' ... 50 0.39 1
(BJ404999) Dictyostelium discoideum cDNA clone:dds30e09, 3' ... 50 0.39 1
(BJ404296) Dictyostelium discoideum cDNA clone:dds28h03, 3' ... 50 0.39 1
(BJ354612) Dictyostelium discoideum cDNA clone:dda54n06, 3' ... 50 0.39 1
(BJ351008) Dictyostelium discoideum cDNA clone:dda41p18, 3' ... 50 0.39 1
(BJ349402) Dictyostelium discoideum cDNA clone:dda36k08, 3' ... 50 0.39 1
(BJ348207) Dictyostelium discoideum cDNA clone:dda32c14, 3' ... 50 0.39 1
(BJ341611) Dictyostelium discoideum cDNA clone:dda7m11, 3' e... 50 0.39 1
(AC068407) Homo sapiens chromosome 6 clone RP11-93N23 map 6,... 40 0.47 7
(AV322977) Mus musculus 11 days embryo head cDNA, RIKEN full... 44 0.68 2
(CP000776) Campylobacter hominis ATCC BAA-381, complete genome. 38 0.76 19
(EJ497327) 1095403582470 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.82 2
(AV292848) Mus musculus 6 days neonate head cDNA, RIKEN full... 44 0.97 2
(AF474338) Dictyostelium discoideum ABC transporter ABCC.6 (... 36 0.99 2
(CU929159) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 1.1 5
(AM449363) Vitis vinifera contig VV78X092915.11, whole genom... 48 1.5 1
(AC222640) Bos taurus clone CH240-443P23, WORKING DRAFT SEQU... 48 1.5 1
(AC217154) Bos taurus clone CH240-15D13, WORKING DRAFT SEQUE... 48 1.5 1
(AC171307) Bos taurus clone CH240-301B8, WORKING DRAFT SEQUE... 48 1.5 1
(EK189087) 1095460012666 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.5 1
(DX528313) GH_MBb0050E19f GH_MBb Gossypium hirsutum genomic ... 48 1.5 1
(EE257093) RFAAI06TH Castor bean cDNA library from flowers,8... 48 1.5 1
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 38 1.7 13
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 1.8 15
(AC152936) Medicago truncatula clone mth2-47n14, complete se... 40 1.8 5
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 42 1.9 12
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 34 2.0 2
(AC223866) Bos taurus clone CH240-455P13, WORKING DRAFT SEQU... 40 2.1 9
(AC215630) Populus trichocarpa clone POP049-I09, complete se... 34 2.1 8
(AM438138) Vitis vinifera contig VV78X137012.2, whole genome... 40 2.3 3
(BV256726) S235P6146FD3.T0 ItalianGreyhound Canis familiaris... 44 2.4 2
(AC179591) Strongylocentrotus purpuratus clone R3-1029G1, WO... 40 2.5 6
(DU119146) KBrH092J19R Brassica rapa BAC library KBrH Brassi... 38 2.6 3
(AM180355) Clostridium difficile 630 complete genome. 36 2.6 20
(GE871913) 1112870121443 BABEVCEREB-C-01-1-7KB Papio anubis ... 34 3.0 3
(AC231027) Bos taurus clone CH240-493G4, WORKING DRAFT SEQUE... 34 3.0 2
(AP003633) Oryza sativa Japonica Group genomic DNA, chromoso... 34 3.0 2
(AC163874) Bos taurus clone CH240-139F20, *** SEQUENCING IN ... 34 3.0 2
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 3.0 12
(FH629839) CHO_OF4958xm20r1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 3.0 2
(ER587392) 1093015901796 Global-Ocean-Sampling_GS-36-01-01-2... 46 3.1 2
(EA679383) Sequence 58262 from patent US 7365185. 34 3.2 2
(AC146823) Otolemur garnettii clone CH256-296O15, WORKING DR... 40 3.4 6
(AM461532) Vitis vinifera contig VV78X242991.8, whole genome... 44 3.4 2
(AM454341) Vitis vinifera, whole genome shotgun sequence, co... 42 3.7 4
(EA726259) Sequence 105138 from patent US 7365185. 34 3.7 2
(EC950108) WIN0548.C21_L01 Cab Sauv flower, leaf and root no... 34 3.8 3
(EA639727) Sequence 18606 from patent US 7365185. 34 3.9 2
(BD460431) Diagnosis of Diseases Associated with Cell Cycle. 34 3.9 5
(BD452353) Diagnosis of Diseases Associated with Cell Cycle. 34 3.9 5
(AX348752) Sequence 210 from Patent WO0202807. 34 3.9 5
(AX344359) Sequence 206 from Patent WO0200926. 34 3.9 5
(AX251967) Sequence 228 from Patent WO0168911. 34 3.9 5
(EJ208610) 1092345343105 Global-Ocean-Sampling_GS-27-01-01-1... 30 3.9 4
(ED895843) OA_CBa0082N22.r OA_CBa Oryza australiensis genomi... 36 4.0 2
(EK317713) 1095462419029 Global-Ocean-Sampling_GS-31-01-01-1... 34 4.1 3
(AX344573) Sequence 24 from Patent WO0200932. 34 4.1 18
(AC220854) Bos taurus clone CH240-342N13, WORKING DRAFT SEQU... 40 4.1 6
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 32 5.3 23
(AL078470) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 42 5.5 7
(AL713963) Zebrafish DNA sequence from clone BUSM1-78P07 in ... 46 6.0 1
(CU570868) M.truncatula DNA sequence from clone MTH2-162A5 o... 46 6.0 1
(CT971488) M.truncatula DNA sequence from clone MTH2-154I11 ... 46 6.0 1
(AC188991) Medicago truncatula chromosome 2 BAC clone mth2-2... 46 6.0 1
(AC173287) Medicago truncatula chromosome 2 BAC clone mte1-5... 46 6.0 1
(AC159142) Medicago truncatula chromosome 2 BAC clone mth2-1... 46 6.0 1
(AC152496) Medicago truncatula clone mth2-15e22, complete se... 46 6.0 1
(AC146755) Medicago truncatula clone mth2-15i15, complete se... 46 6.0 1
(AC131240) Medicago truncatula clone mth2-33j22, complete se... 46 6.0 1
(AC130805) Medicago truncatula clone mth2-9n1, complete sequ... 46 6.0 1
(CS468870) Sequence 61 from Patent EP1748080. 46 6.0 1
(CS468869) Sequence 60 from Patent EP1748080. 46 6.0 1
(CS419347) Sequence 61 from Patent WO2006094836. 46 6.0 1
(CS419346) Sequence 60 from Patent WO2006094836. 46 6.0 1
(BD061520) Genome DNA of symbiotic bacteria of aphid. 46 6.0 1
(AX345234) Sequence 305 from Patent WO0200928. 46 6.0 1
(AR409405) Sequence 1 from patent US 6632935. 46 6.0 1
(EF158099) Plasmodium falciparum erythrocyte membrane protei... 46 6.0 1
(EF158074) Plasmodium falciparum erythrocyte membrane protei... 46 6.0 1
(EF158073) Plasmodium falciparum erythrocyte membrane protei... 46 6.0 1
(AC157143) Bos taurus clone CH240-69K2, WORKING DRAFT SEQUEN... 46 6.0 1
(AC127167) Medicago truncatula clone mth2-26p19, WORKING DRA... 46 6.0 1
(CT030678) Platynereis dumerilii bac CH305_163L3, WORKING DR... 46 6.0 1
(AP008018) Lotus japonicus genomic DNA, chromosome 6, clone:... 46 6.0 1
(AP007818) Lotus japonicus genomic DNA, chromosome 6, clone:... 46 6.0 1
(AL844507) Plasmodium falciparum chromosome 8. 46 6.0 1
(AL844506) Plasmodium falciparum chromosome 7. 46 6.0 1
(AL713862) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 6.0 1
(AC202571) Medicago truncatula clone mth2-161h12, WORKING DR... 46 6.0 1
(AC202324) Medicago truncatula clone mth2-160m22, WORKING DR... 46 6.0 1
(AC169667) Medicago truncatula chromosome 2 clone mth2-77f16... 46 6.0 1
(AC163413) Bos taurus clone CH240-252L23, WORKING DRAFT SEQU... 46 6.0 1
(FH176004) CHO_OF3402xo17f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 6.0 1
(EK540629) 1095516056521 Global-Ocean-Sampling_GS-32-01-01-1... 46 6.0 1
(EK528841) 1095515652349 Global-Ocean-Sampling_GS-32-01-01-1... 46 6.0 1
(EK311560) 1095462399203 Global-Ocean-Sampling_GS-31-01-01-1... 46 6.0 1
(EJ997363) 1093024002848 Global-Ocean-Sampling_GS-30-02-01-1... 46 6.0 1
(EJ846179) 1093017856481 Global-Ocean-Sampling_GS-30-02-01-1... 46 6.0 1
(EJ560116) 1092959544072 Global-Ocean-Sampling_GS-29-01-01-1... 46 6.0 1
(EJ440231) 1093015301083 Global-Ocean-Sampling_GS-28-01-01-1... 46 6.0 1
(EJ224842) 1092351376587 Global-Ocean-Sampling_GS-27-01-01-1... 46 6.0 1
(DE456199) Bombyx mori genomic DNA, Fosmid clone:GBMFno50_k1... 46 6.0 1
(CZ794046) OC__Ba0162H07.r OC__Ba Oryza coarctata genomic cl... 46 6.0 1
(CZ163827) OC__Ba0001A14.f OC__Ba Oryza coarctata genomic cl... 46 6.0 1
(CF470089) P8-G9 Plasmodium yoelli 17X axenic hepatic stages... 46 6.0 1
(GE454847) 294593314 Nasonia vitripennis Adult Female Nasoni... 46 6.0 1
(CP000743) Methanococcus aeolicus Nankai-3, complete genome. 46 6.0 1
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 46 6.0 1
(CR848829) Zebrafish DNA sequence from clone DKEY-219N14 in ... 40 6.3 7
(AP009334) Musa balbisiana genomic DNA, BAC clone:MBP_31O07. 36 6.5 9
(CT485785) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 6.9 6
(AX344569) Sequence 20 from Patent WO0200932. 34 7.6 15
(FC126213) 1106878638315 BABEVPN-C-01-1-7KB Papio anubis cDN... 34 7.7 3
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 32 7.8 15
(CS605079) Sequence 4065 from Patent WO2007039234. 36 7.9 4
(CS603431) Sequence 2417 from Patent WO2007039234. 36 7.9 4
(DE367825) Bombyx mori genomic DNA, BAC clone:BET_621_H08. 42 7.9 2
(GE894802) 1112934605883 BABEVCEREB-C-01-1-7KB Papio anubis ... 34 9.1 3
(BW934170) Branchiostoma floridae cDNA, neurula clone:bfne11... 42 9.1 2
(GE891504) 1112934456590 BABEVCEREB-C-01-1-7KB Papio anubis ... 34 9.7 3
(FE567702) CAXF16217.rev Amphioxus Branchiostoma floridae un... 42 9.7 2

>(AC116979) Dictyostelium discoideum chromosome 2 map 6445720-6776760
strain AX4, complete sequence.
Length = 331039

Score = 1211 bits (611), Expect(2) = 0.0
Identities = 611/611 (100%)
Strand = Plus / Minus


Query: 1162 atggtgatagtggcaggaccattagcaagtagttcaggtataccagaagttaaaggaatt 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322358 atggtgatagtggcaggaccattagcaagtagttcaggtataccagaagttaaaggaatt 322299


Query: 1222 ttaaatggtgttaaagttagagaagcattaggatttagagcattattaggaaagattgta 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322298 ttaaatggtgttaaagttagagaagcattaggatttagagcattattaggaaagattgta 322239


Query: 1282 tcattggtactatcattttcatctggattatttgttggacctgagggaccaatgattcat 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322238 tcattggtactatcattttcatctggattatttgttggacctgagggaccaatgattcat 322179


Query: 1342 attggatcagcagttggtgctgccattagtcaatttaagtcatcgacaatgggtttctat 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322178 attggatcagcagttggtgctgccattagtcaatttaagtcatcgacaatgggtttctat 322119


Query: 1402 ccatcgttattcctttcctatagaaacgatagagataagagagatttcatttcaattggt 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322118 ccatcgttattcctttcctatagaaacgatagagataagagagatttcatttcaattggt 322059


Query: 1462 gcagccactgggctggcagcagcatttggtgcacccattggcggcgttttattttcaatt 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322058 gcagccactgggctggcagcagcatttggtgcacccattggcggcgttttattttcaatt 321999


Query: 1522 gaagaggtatcatcattttggtcacgtcaattaacttggagaacatttttcacttgtgtt 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321998 gaagaggtatcatcattttggtcacgtcaattaacttggagaacatttttcacttgtgtt 321939


Query: 1582 atagcagcattcacaaccaatttccttttacaaggtattggttcgtcacctgatatgcat 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321938 atagcagcattcacaaccaatttccttttacaaggtattggttcgtcacctgatatgcat 321879


Query: 1642 gatactggtttactcacttttggtttctcaagactctatctatttaggtattcagaatta 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321878 gatactggtttactcacttttggtttctcaagactctatctatttaggtattcagaatta 321819


Query: 1702 ttatgtttttgtttcttgggtttaattggtggtttgttaggtgcattctttgtgttttta 1761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321818 ttatgtttttgtttcttgggtttaattggtggtttgttaggtgcattctttgtgttttta 321759


Query: 1762 aatatacattt 1772
|||||||||||
Sbjct: 321758 aatatacattt 321748

Score = 690 bits (348), Expect(7) = 0.0
Identities = 358/363 (98%)
Strand = Plus / Minus


Query: 2009 caatttggtcaagtggtttatgggtcgcaggtggactttttgtaccaatgatgatggttg 2068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321325 caatttggtcaagtggtttatgggtcgcaggtggactttttgtaccaatgatgatggttg 321266


Query: 2069 gtgcaggatttggtaggttattcggtcaaaccatttcaatgtggttcacaaatattgata 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321265 gtgcaggatttggtaggttattcggtcaaaccatttcaatgtggttcacaaatattgata 321206


Query: 2129 gtagtatttatgcattggtaggttcagctgcaatgatggctggttattgtaggatgaccg 2188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321205 gtagtatttatgcattggtaggttcagctgcaatgatggctggttattgtaggatgaccg 321146


Query: 2189 tttgtatagtggtaatcatggttgaactaactgaaggtacacaatatttagtaccaatca 2248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321145 tttgtatagtggtaatcatggttgaactaactgaaggtacacaatatttagtaccaatca 321086


Query: 2249 ttttggcagtaatgatatntaaangggttggngacttttttaatgaatcagtttatgaac 2308
|||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 321085 ttttggcagtaatgatatctaaatgggttggtgacttttttaatgaatcagtttatgaac 321026


Query: 2309 atttaatggaacanaaatcaataccattcttacaatccaaaccaccccnttcaacgaata 2368
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321025 atttaatggaacagaaatcaataccattcttacaatccaaaccaccccattcaacgaata 320966


Query: 2369 aca 2371
|||
Sbjct: 320965 aca 320963

Score = 331 bits (167), Expect(7) = 0.0
Identities = 167/167 (100%)
Strand = Plus / Minus


Query: 690 gatgggatcatcattaaataaacccttatcagatagggtggaagatataaataatcaatc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322996 gatgggatcatcattaaataaacccttatcagatagggtggaagatataaataatcaatc 322937


Query: 750 atcaatgatatatgacccatggagacacagaggtgatgtaaattcaacctatcattcatc 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322936 atcaatgatatatgacccatggagacacagaggtgatgtaaattcaacctatcattcatc 322877


Query: 810 atcatcggttacacatagaagaaggaatcataggctatcgcctctag 856
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322876 atcatcggttacacatagaagaaggaatcataggctatcgcctctag 322830

Score = 327 bits (165), Expect(2) = 0.0
Identities = 165/165 (100%)
Strand = Plus / Minus


Query: 1806 tccttatttaagattattcgaagcattgtttgtaagtgttgtaacatctgtagtttgtta 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321714 tccttatttaagattattcgaagcattgtttgtaagtgttgtaacatctgtagtttgtta 321655


Query: 1866 ttatgcctcttttatatttgattgtagataccaatcgaatattgtcattgaaactagtgt 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321654 ttatgcctcttttatatttgattgtagataccaatcgaatattgtcattgaaactagtgt 321595


Query: 1926 ttgtgaagatcaatcgaatactgaaatggtgcaattcttttgtcc 1970
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321594 ttgtgaagatcaatcgaatactgaaatggtgcaattcttttgtcc 321550

Score = 232 bits (117), Expect(7) = 0.0
Identities = 117/117 (100%)
Strand = Plus / Minus


Query: 965 catttggtaaatggattatatgtttatttttaggtgttatagttggatgtatagcatatg 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322638 catttggtaaatggattatatgtttatttttaggtgttatagttggatgtatagcatatg 322579


Query: 1025 taattaaaatggttgttcaattacttcaaggtttaaaatttcattatacaaatcatt 1081
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322578 taattaaaatggttgttcaattacttcaaggtttaaaatttcattatacaaatcatt 322522

Score = 145 bits (73), Expect(7) = 0.0
Identities = 73/73 (100%)
Strand = Plus / Minus


Query: 876 tatacaaagtttaaattttagtgtaaatgataatcttttacaaagagaagaatatgaaaa 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322810 tatacaaagtttaaattttagtgtaaatgataatcttttacaaagagaagaatatgaaaa 322751


Query: 936 aacaacaaaaggg 948
|||||||||||||
Sbjct: 322750 aacaacaaaaggg 322738

Score = 65.9 bits (33), Expect(7) = 0.0
Identities = 33/33 (100%)
Strand = Plus / Minus


Query: 1969 ccaccattattagtgtttacattgatttcatta 2001
|||||||||||||||||||||||||||||||||
Sbjct: 321365 ccaccattattagtgtttacattgatttcatta 321333

Score = 56.0 bits (28), Expect(7) = 0.0
Identities = 28/28 (100%)
Strand = Plus / Minus


Query: 1082 atgtatcaaatggattacaaggtgaagc 1109
||||||||||||||||||||||||||||
Sbjct: 322438 atgtatcaaatggattacaaggtgaagc 322411

Score = 30.2 bits (15), Expect(7) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 564 attatttgaatttaa 578
|||||||||||||||
Sbjct: 329577 attatttgaatttaa 329563

Score = 416 bits (210), Expect(6) = 0.0
Identities = 222/228 (97%)
Strand = Plus / Plus


Query: 378 actttttgaggtttctgttgtaaatttatcaaagtcaaaattttcatntaaataaatctn 437
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320685 actttttgaggtttctgttgtaaatttatcaaagtcaaaattttcatctaaataaatctc 320744


Query: 438 ttcaccggtncctntatagaatacacgataaaagagtagtaccaaaatatgatctntaag 497
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320745 ttcaccggtacctctatagaatacacgataaaagagtagtaccaaaatatgatctctaag 320804


Query: 498 aatgatncctcggtaaagtctttgattatcatatggaccactattgataacagggaaagc 557
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320805 aatgatacctcggtaaagtctttgattatcatatggaccactattgataacagggaaagc 320864


Query: 558 attatgattatttgaatttaaaatgttgaccaatagtctaacttggca 605
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320865 attatgattatttgaatttaaaatgttgaccaatagtctaacttggca 320912

Score = 216 bits (109), Expect(6) = 0.0
Identities = 109/109 (100%)
Strand = Plus / Plus


Query: 1 gacattaaaaaatattatttgaataatttgagtttaacaagtttttagaataaatcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320158 gacattaaaaaatattatttgaataatttgagtttaacaagtttttagaataaatcattt 320217


Query: 61 ctagttaccattccaactacctcgttgtttatatcaactttaatatttt 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320218 ctagttaccattccaactacctcgttgtttatatcaactttaatatttt 320266

Score = 131 bits (66), Expect(6) = 0.0
Identities = 68/69 (98%)
Strand = Plus / Plus


Query: 301 atttacatacatggtcttaaatcaataaaagaatctaattcaaattgatcaaaattcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320608 atttacatacatggtcttaaatcaataaaagaatctaattcaaattgatcaaaattcatt 320667


Query: 361 tcanataaa 369
||| |||||
Sbjct: 320668 tcagataaa 320676

Score = 127 bits (64), Expect(6) = 0.0
Identities = 66/67 (98%)
Strand = Plus / Plus


Query: 234 cttactaactggtaaatgtcttaaacccatatttntaaataatttataagcttcaacaaa 293
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320391 cttactaactggtaaatgtcttaaacccatatttctaaataatttataagcttcaacaaa 320450


Query: 294 tgaaaat 300
|||||||
Sbjct: 320451 tgaaaat 320457

Score = 103 bits (52), Expect(6) = 0.0
Identities = 52/52 (100%)
Strand = Plus / Plus


Query: 138 gaagacaagtattagaatgatgattatataaatttttataaaataaaattaa 189
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320295 gaagacaagtattagaatgatgattatataaatttttataaaataaaattaa 320346

Score = 26.3 bits (13), Expect(6) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 1811 atttaagattatt 1823
|||||||||||||
Sbjct: 329447 atttaagattatt 329459

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,564,443,601
Number of extensions: 160716662
Number of successful extensions: 13095989
Number of sequences better than 10.0: 156
Length of query: 2371
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2346
Effective length of database: 96,311,147,814
Effective search space: 225945952771644
Effective search space used: 225945952771644
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U15844-1 (Contig-U15844-1Q) /CSM_Contig/Contig-U15844-1Q.Seq.d
(2371 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54AX6) RecName: Full=Chloride channel protein A; &AF414428_1(... 453 e-125
T24009(T24009)hypothetical protein R07B7.1 - Caenorhabditis eleg... 269 4e-70
AF319616_1(AF319616|pid:none) Caenorhabditis elegans CLC-type ch... 269 4e-70
D28475_1(D28475|pid:none) Homo sapiens KIAA0046 mRNA, partial cds. 258 9e-67
BC149961_1(BC149961|pid:none) Bos taurus chloride channel 7, mRN... 256 3e-66
BC073264_1(BC073264|pid:none) Xenopus laevis MGC80627 protein, m... 255 6e-66
AK294764_1(AK294764|pid:none) Homo sapiens cDNA FLJ61242 complet... 255 6e-66
(Q4PKH3) RecName: Full=Chloride channel protein 7; Shor... 253 2e-65
AK056551_1(AK056551|pid:none) Homo sapiens cDNA FLJ31989 fis, cl... 253 2e-65
AE006467_8(AE006467|pid:none) Homo sapiens 16p13.3 sequence sect... 252 4e-65
(O35454) RecName: Full=Chloride channel protein 6; Shor... 252 4e-65
AL031600_2(AL031600|pid:none) Human DNA sequence from clone LA16... 252 4e-65
AK304796_1(AK304796|pid:none) Homo sapiens cDNA FLJ58238 complet... 252 4e-65
AX492863_1(AX492863|pid:none) Sequence 13 from Patent WO02059612... 252 5e-65
(Q9TT16) RecName: Full=Chloride channel protein 6; Shor... 251 1e-64
DQ020494_1(DQ020494|pid:none) Oryctolagus cuniculus chloride cha... 251 1e-64
AK292136_1(AK292136|pid:none) Homo sapiens cDNA FLJ78478 complet... 250 1e-64
AL606929_1(AL606929|pid:none) Mouse DNA sequence from clone RP23... 249 2e-64
S68426(S68426;S72561)chloride channel protein CLC-7 - rat 248 9e-64
BC125873_1(BC125873|pid:none) Danio rerio chloride channel 7, mR... 245 5e-63
CR858242_1(CR858242|pid:none) Pongo abelii mRNA; cDNA DKFZp469B2... 244 8e-63
AE013599_1591(AE013599|pid:none) Drosophila melanogaster chromos... 227 1e-57
AC123974_4(AC123974|pid:none) Oryza sativa chromosome 3 BAC OSJN... 223 3e-56
Z71445_1(Z71445|pid:none) A.thaliana mRNA for CLC-a chloride cha... 219 4e-55
AY059791_1(AY059791|pid:none) Arabidopsis thaliana putative anio... 218 6e-55
(P92942) RecName: Full=Chloride channel protein CLC-b; ... 218 1e-54
AK220319_1(AK220319|pid:none) Mus musculus premature mRNA for mK... 216 3e-54
Z71450_1(Z71450|pid:none) A.thaliana mRNA for CLC-d chloride cha... 215 7e-54
AF133209_1(AF133209|pid:none) Nicotiana tabacum CLC-Nt2 protein ... 206 2e-51
T01843(T01843)chloride channel protein homolog F9D12.10 - Arabid... 206 3e-51
AP003297_21(AP003297|pid:none) Oryza sativa Japonica Group genom... 201 8e-50
(P60300) RecName: Full=Putative chloride channel-like protein CL... 193 3e-47
CR954209_379(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 187 2e-45
AB069966_1(AB069966|pid:none) Oryza sativa Japonica Group OsCLC-... 186 3e-45
AL139794_45(AL139794|pid:none) Leishmania major Friedlin chromos... 186 4e-45
AP005808_9(AP005808|pid:none) Oryza sativa Japonica Group genomi... 184 1e-44
AC140549_29(AC140549|pid:none) Medicago truncatula clone mth2-28... 184 1e-44
AM502222_103(AM502222|pid:none) Leishmania infantum chromosome 4. 184 1e-44
AB069967_1(AB069967|pid:none) Oryza sativa Japonica Group OsCLC-... 182 4e-44
(Q1ZXJ0) RecName: Full=Chloride channel protein D; 182 6e-44
CP001141_210(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 181 1e-43
AM427251_6(AM427251|pid:none) Vitis vinifera contig VV78X059698.... 179 5e-43
CR857095_1(CR857095|pid:none) Pongo abelii mRNA; cDNA DKFZp469L0... 177 2e-42
FN357450_22(FN357450|pid:none) Schistosoma mansoni genome sequen... 167 1e-39
AE014296_2784(AE014296|pid:none) Drosophila melanogaster chromos... 167 2e-39
BC005553_1(BC005553|pid:none) Mus musculus chloride channel 4-2,... 160 2e-37
BC151324_1(BC151324|pid:none) Bos taurus chloride channel 4, mRN... 157 1e-36
BC110668_1(BC110668|pid:none) Mus musculus chloride channel 4-2,... 156 3e-36
(P51794) RecName: Full=Chloride channel protein 4; Shor... 156 4e-36
AF182215_1(AF182215|pid:none) Tilapia mossambica chloride channe... 156 4e-36
(Q61418) RecName: Full=Chloride channel protein 4; Shor... 156 4e-36
AK035804_1(AK035804|pid:none) Mus musculus 16 days neonate cereb... 155 6e-36
BC036068_1(BC036068|pid:none) Homo sapiens chloride channel 4, m... 155 6e-36
I37242(I37242) chloride channel - human &X77197_1(X77197|pid:no... 154 1e-35
AB035090_1(AB035090|pid:none) Caenorhabditis elegans clh-3 mRNA ... 153 3e-35
T19065(T19065;T25256)probable protein kinase C-regulated chlorid... 153 3e-35
AF173174_1(AF173174|pid:none) Caenorhabditis elegans CLC chlorid... 153 3e-35
FJ534534_1(FJ534534|pid:none) Tetraodon nigroviridis chloride ch... 151 9e-35
AK299611_1(AK299611|pid:none) Homo sapiens cDNA FLJ50190 complet... 151 9e-35
AF347688_4(AF347688|pid:none) Mus musculus chloride channel isof... 149 6e-34
AB019542_1(AB019542|pid:none) Homo sapiens clcn3e mRNA, complete... 149 6e-34
AK127483_1(AK127483|pid:none) Homo sapiens cDNA FLJ45575 fis, cl... 149 6e-34
BC057133_1(BC057133|pid:none) Mus musculus chloride channel 3, m... 149 6e-34
AF347688_5(AF347688|pid:none) Mus musculus chloride channel isof... 149 6e-34
D17521_1(D17521|pid:none) Rattus rattus ClC-3 mRNA for protein k... 149 6e-34
AF347688_3(AF347688|pid:none) Mus musculus chloride channel isof... 149 6e-34
(Q9R279) RecName: Full=Chloride channel protein 3; Shor... 149 6e-34
X78520_2(X78520|pid:none) H. sapiens RNA for CLCN3. 149 6e-34
BC057855_1(BC057855|pid:none) Mus musculus chloride channel 3, m... 149 6e-34
BC136510_1(BC136510|pid:none) Homo sapiens chloride channel 3, m... 149 6e-34
AX492851_1(AX492851|pid:none) Sequence 1 from Patent WO02059612.... 149 6e-34
AK161327_1(AK161327|pid:none) Mus musculus adult male testis cDN... 149 6e-34
(P51791) RecName: Full=Chloride channel protein 3; Shor... 149 6e-34
(O18894) RecName: Full=Chloride channel protein 3; Shor... 149 6e-34
(P51795) RecName: Full=Chloride channel protein 5; Shor... 148 8e-34
AK056560_1(AK056560|pid:none) Homo sapiens cDNA FLJ31998 fis, cl... 148 8e-34
AK092049_1(AK092049|pid:none) Homo sapiens cDNA FLJ34730 fis, cl... 148 1e-33
AM502219_18(AM502219|pid:none) Leishmania infantum chromosome 1. 147 2e-33
BC128843_1(BC128843|pid:none) Danio rerio wu:fb78c02, mRNA (cDNA... 147 2e-33
AK149276_1(AK149276|pid:none) Mus musculus adult retina cDNA, RI... 147 2e-33
Y09941_1(Y09941|pid:none) Xenopus laevis mRNA for putative chlor... 147 2e-33
AM048628_1(AM048628|pid:none) Canis familiaris mRNA for chloride... 146 3e-33
AM048629_1(AM048629|pid:none) Canis familiaris mRNA for chloride... 146 3e-33
D50497_1(D50497|pid:none) Rattus norvegicus mRNA for chloride ch... 145 5e-33
(P51796) RecName: Full=Chloride channel protein 5; Shor... 145 5e-33
AY227911_1(AY227911|pid:none) Cryptococcus neoformans var. grubi... 145 5e-33
BC036347_1(BC036347|pid:none) Mus musculus chloride channel 5, m... 145 5e-33
BC127589_1(BC127589|pid:none) Danio rerio wu:fb78c02, mRNA (cDNA... 145 7e-33
(Q9WVD4) RecName: Full=Chloride channel protein 5; Shor... 145 7e-33
AL663104_1(AL663104|pid:none) Mouse DNA sequence from clone RP23... 145 7e-33
AF182216_1(AF182216|pid:none) Tilapia mossambica chloride channe... 145 7e-33
(Q9VGH7) RecName: Full=Chloride channel protein 2; Shor... 145 9e-33
AE014297_1423(AE014297|pid:none) Drosophila melanogaster chromos... 145 9e-33
(P35525) RecName: Full=Chloride channel protein 2; Shor... 145 9e-33
AF005720_1(AF005720|pid:none) Rattus norvegicus chloride channel... 145 9e-33
BC124729_1(BC124729|pid:none) Danio rerio zgc:153764, mRNA (cDNA... 144 1e-32
AF063904_1(AF063904|pid:none) Xenopus laevis chloride channel Cl... 144 1e-32
AK036735_1(AK036735|pid:none) Mus musculus adult male bone cDNA,... 144 2e-32
AK290940_1(AK290940|pid:none) Homo sapiens cDNA FLJ77943 complet... 144 2e-32
AF026004_1(AF026004|pid:none) Homo sapiens chloride channel prot... 144 2e-32
(P51788) RecName: Full=Chloride channel protein 2; Shor... 144 2e-32
AY046403_1(AY046403|pid:none) Mus musculus chloride channel 1 mR... 143 2e-32
BT009973_1(BT009973|pid:none) Drosophila melanogaster RE62514 fu... 143 3e-32
(Q9WU45) RecName: Full=Chloride channel protein 2; Shor... 143 3e-32
(P35524) RecName: Full=Chloride channel protein, skeletal muscle... 143 3e-32
(Q9R0A1) RecName: Full=Chloride channel protein 2; Shor... 142 4e-32
S68210(S68210) chloride channel protein 2-beta - rabbit &S80361... 142 4e-32
Y09940_1(Y09940|pid:none) X.laevis mRNA for chloride channel ClC... 142 4e-32
(P51789) RecName: Full=Chloride channel protein 2; Shor... 142 4e-32
AF139724_1(AF139724|pid:none) Mus musculus voltage-regulated and... 142 4e-32
AK155104_1(AK155104|pid:none) Mus musculus NOD-derived CD11c +ve... 142 4e-32
(Q5RDJ7) RecName: Full=Chloride channel protein 3; Shor... 142 6e-32
CR382138_503(CR382138|pid:none) Debaryomyces hansenii strain CBS... 142 7e-32
AY112740_1(AY112740|pid:none) Rattus norvegicus chloride channel... 141 9e-32
AY119539_1(AY119539|pid:none) Drosophila melanogaster GH23529 fu... 140 2e-31
BC148963_1(BC148963|pid:none) Bos taurus chloride channel 2, mRN... 140 2e-31
(Q64347) RecName: Full=Chloride channel protein, skeletal muscle... 140 3e-31
AM270320_115(AM270320|pid:none) Aspergillus niger contig An14c01... 139 4e-31
AE017345_381(AE017345|pid:none) Cryptococcus neoformans var. neo... 139 5e-31
DQ272692_1(DQ272692|pid:none) Oryza sativa (japonica cultivar-gr... 138 8e-31
AE017351_187(AE017351|pid:none) Cryptococcus neoformans var. neo... 138 1e-30
AP007175_516(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 137 1e-30
AM494969_366(AM494969|pid:none) Leishmania braziliensis chromoso... 137 2e-30
AE014296_2783(AE014296|pid:none) Drosophila melanogaster chromos... 137 2e-30
(Q9MZT1) RecName: Full=Chloride channel protein, skeletal muscle... 136 4e-30
CU633900_919(CU633900|pid:none) Podospora anserina genomic DNA c... 135 7e-30
AB462980_1(AB462980|pid:none) Synthetic construct DNA, clone: pF... 135 9e-30
BC124896_1(BC124896|pid:none) Xenopus laevis cDNA clone MGC:1545... 134 1e-29
CR954203_576(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 134 2e-29
AB083819_1(AB083819|pid:none) Ascidia sydneiensis samea mRNA for... 132 6e-29
(O60159) RecName: Full=Uncharacterized chloride channel protein ... 132 6e-29
CR382131_365(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 131 1e-28
BX927218_5(BX927218|pid:none) Zebrafish DNA sequence from clone ... 130 3e-28
CU928181_116(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 129 6e-28
FM992690_405(FM992690|pid:none) Candida dubliniensis CD36 chromo... 128 1e-27
CP000498_214(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 127 2e-27
CU928180_597(CU928180|pid:none) Kluyveromyces thermotolerans str... 126 3e-27
U41551_5(U41551|pid:none) Caenorhabditis elegans cosmid T06F4, c... 125 5e-27
AF319615_1(AF319615|pid:none) Caenorhabditis elegans CLC-type ch... 125 5e-27
U41551_4(U41551|pid:none) Caenorhabditis elegans cosmid T06F4, c... 125 5e-27
AM270269_19(AM270269|pid:none) Aspergillus niger contig An12c013... 124 1e-26
T02939(T02939) chloride channel protein ClC-1 - common tobacco ... 124 2e-26
T16821(T16821)hypothetical protein T06F4.2 - Caenorhabditis eleg... 124 2e-26
AP007171_686(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 123 3e-26
AK304362_1(AK304362|pid:none) Homo sapiens cDNA FLJ61670 complet... 119 5e-25
CT010490_1(CT010490|pid:none) Mouse DNA sequence from clone RP23... 117 2e-24
(P37020) RecName: Full=Protein GEF1; AltName: Full=Voltage-gated... 116 3e-24
FM992695_205(FM992695|pid:none) Candida dubliniensis CD36 chromo... 116 3e-24
T25358(T25358)hypothetical protein T27D12.2 - Caenorhabditis ele... 115 7e-24
AE016818_276(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 115 9e-24
AF173170_1(AF173170|pid:none) Caenorhabditis elegans CLC chlorid... 114 1e-23
DQ056855_1(DQ056855|pid:none) Cavia porcellus ClC-2 chloride cha... 114 2e-23
CR382125_978(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 113 4e-23
AF319613_1(AF319613|pid:none) Caenorhabditis elegans CLC-type ch... 112 6e-23
AF113530_1(AF113530|pid:none) Cavia porcellus chloride channel p... 112 8e-23
AK032674_1(AK032674|pid:none) Mus musculus 10 days neonate cereb... 110 2e-22
BC006158_1(BC006158|pid:none) Homo sapiens chloride channel 7, m... 110 3e-22
(Q54LQ4) RecName: Full=Chloride channel protein E; 109 5e-22
CR382137_1069(CR382137|pid:none) Debaryomyces hansenii chromosom... 108 9e-22
CR382137_969(CR382137|pid:none) Debaryomyces hansenii strain CBS... 108 1e-21
CR382129_746(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 104 1e-20
CP000497_103(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 104 2e-20
(O94287) RecName: Full=Uncharacterized chloride channel protein ... 102 6e-20
AL021155_5(AL021155|pid:none) Human DNA sequence from clone RP5-... 100 2e-19
X99475_1(X99475|pid:none) H.sapiens mRNA for chloride channel, C... 100 2e-19
DQ440134_1(DQ440134|pid:none) Aedes aegypti clone AE-9505 chlori... 97 3e-18
FM992693_382(FM992693|pid:none) Candida dubliniensis CD36 chromo... 95 1e-17
CP001329_87(CP001329|pid:none) Micromonas sp. RCC299 chromosome ... 94 2e-17
CP000951_552(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 91 2e-16
AJ011385_1(AJ011385|pid:none) Xenopus laevis mRNA for CLC relate... 91 3e-16
AE017354_1704(AE017354|pid:none) Legionella pneumophila subsp. p... 89 7e-16
AB169171_1(AB169171|pid:none) Macaca fascicularis testis cDNA, c... 89 7e-16
X99472_1(X99472|pid:none) H.sapiens ClC-6 gene. 88 1e-15
BT069458_1(BT069458|pid:none) Zea mays full-length cDNA clone ZM... 88 1e-15
CP000675_1821(CP000675|pid:none) Legionella pneumophila str. Cor... 88 2e-15
AF133215_1(AF133215|pid:none) Cavia porcellus chloride channel C... 87 3e-15
CP000582_419(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 87 4e-15
CP000425_1683(CP000425|pid:none) Lactococcus lactis subsp. cremo... 86 6e-15
AE005176_1664(AE005176|pid:none) Lactococcus lactis subsp. lacti... 83 4e-14
BT067690_1(BT067690|pid:none) Zea mays full-length cDNA clone ZM... 83 5e-14
AY296114_1(AY296114|pid:none) Ixodes scapularis chloride channel... 82 9e-14
CP001037_2743(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 80 3e-13
AF173172_1(AF173172|pid:none) Caenorhabditis elegans CLC chlorid... 80 3e-13
AF319614_1(AF319614|pid:none) Caenorhabditis elegans CLC-type ch... 79 6e-13
BC081761_1(BC081761|pid:none) Rattus norvegicus chloride channel... 79 6e-13
(Q06393) RecName: Full=Chloride channel protein ClC-Ka; ... 79 6e-13
AJ001910_1(AJ001910|pid:none) Homo sapiens ClC-7 chloride channe... 78 1e-12
AY046404_1(AY046404|pid:none) Mus musculus chloride channel 1 is... 77 2e-12
CP001097_1068(CP001097|pid:none) Chlorobium limicola DSM 245, co... 77 3e-12
AY112737_1(AY112737|pid:none) Rattus norvegicus chloride channel... 76 5e-12
AY112739_1(AY112739|pid:none) Rattus norvegicus chloride channel... 76 6e-12
AY112738_1(AY112738|pid:none) Rattus norvegicus chloride channel... 76 6e-12
CP000607_954(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 75 8e-12
CU633900_884(CU633900|pid:none) Podospora anserina genomic DNA c... 75 1e-11
CP001108_1147(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 75 1e-11
CP001101_1386(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 73 4e-11
CP000096_889(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 73 5e-11
Z25753_1(Z25753|pid:none) Homo sapiens partial CLCN1 gene for sk... 73 5e-11
AB075525_1(AB075525|pid:none) Oreochromis mossambicus mRNA for O... 70 3e-10
CP001037_1499(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 70 3e-10
CP000678_1721(CP000678|pid:none) Methanobrevibacter smithii ATCC... 70 5e-10
CP000679_670(CP000679|pid:none) Caldicellulosiruptor saccharolyt... 69 6e-10
CP000108_1379(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 69 6e-10
CP000673_2686(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 69 8e-10
AP009049_2432(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 69 8e-10
FJ200299_7(FJ200299|pid:none) Streptococcus thermophilus strain ... 69 8e-10
FM204883_1078(FM204883|pid:none) Streptococcus equi subsp. equi ... 69 1e-09
CP000419_691(CP000419|pid:none) Streptococcus thermophilus LMD-9... 69 1e-09
AC2417(AC2417) hypothetical protein alr4891 [imported] - Nostoc ... 68 1e-09
BC004946_1(BC004946|pid:none) Homo sapiens, clone IMAGE:3615790,... 68 2e-09
AK161489_1(AK161489|pid:none) Mus musculus adult male testis cDN... 67 3e-09
AE004092_845(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 66 5e-09
CP000260_952(CP000260|pid:none) Streptococcus pyogenes MGAS10270... 66 5e-09
AE014074_774(AE014074|pid:none) Streptococcus pyogenes MGAS315, ... 66 5e-09
BA000034_974(BA000034|pid:none) Streptococcus pyogenes SSI-1 DNA... 66 5e-09
CP000829_814(CP000829|pid:none) Streptococcus pyogenes NZ131, co... 66 5e-09
AM295007_935(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 66 7e-09
CP000384_4183(CP000384|pid:none) Mycobacterium sp. MCS, complete... 66 7e-09
CP000150_49(CP000150|pid:none) Burkholderia sp. 383 chromosome 3... 65 9e-09
AP009552_3868(AP009552|pid:none) Microcystis aeruginosa NIES-843... 65 9e-09
CP000721_2889(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 65 1e-08
EF503331_1(EF503331|pid:none) Arabidopsis halleri subsp. halleri... 65 1e-08
EF503351_1(EF503351|pid:none) Arabidopsis lyrata subsp. lyrata i... 65 1e-08
EF503334_1(EF503334|pid:none) Arabidopsis lyrata subsp. petraea ... 65 1e-08
CP000232_1553(CP000232|pid:none) Moorella thermoacetica ATCC 390... 64 2e-08
EF503333_1(EF503333|pid:none) Arabidopsis lyrata subsp. petraea ... 64 2e-08
EF503357_1(EF503357|pid:none) Arabidopsis lyrata subsp. petraea ... 64 3e-08
CP000117_2156(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 64 3e-08
CP000020_1818(CP000020|pid:none) Vibrio fischeri ES114 chromosom... 63 6e-08
CT005270_139(CT005270|pid:none) Leishmania major strain Friedlin... 62 7e-08
BC091969_1(BC091969|pid:none) Danio rerio chloride channel 7, mR... 62 7e-08
CP000825_1969(CP000825|pid:none) Prochlorococcus marinus str. MI... 62 1e-07
CP000407_801(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 62 1e-07
CP000415_25(CP000415|pid:none) Leuconostoc mesenteroides subsp. ... 62 1e-07
CP000246_2122(CP000246|pid:none) Clostridium perfringens ATCC 13... 61 2e-07
CP001577_494(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 61 2e-07
CP001100_2229(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 60 3e-07
AE006470_1371(AE006470|pid:none) Chlorobium tepidum TLS, complet... 60 5e-07
AM494970_126(AM494970|pid:none) Leishmania braziliensis chromoso... 59 6e-07
CP000300_1246(CP000300|pid:none) Methanococcoides burtonii DSM 6... 59 6e-07
CP001087_1533(CP001087|pid:none) Desulfobacterium autotrophicum ... 59 8e-07
AL670285_6(AL670285|pid:none) Mouse DNA sequence from clone RP23... 58 1e-06
CP001154_501(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 58 1e-06
AI2065(AI2065) hypothetical protein alr2079 [imported] - Nostoc ... 58 1e-06
AY714839_5(AY714839|pid:none) Uncultured archaeon GZfos26B2 clon... 58 1e-06
CP000510_837(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 58 1e-06
CP001574_517(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 58 2e-06
AF093592_1(AF093592|pid:none) Sus scrofa chloride channel protei... 58 2e-06
CP001337_3411(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 57 2e-06
AP008971_446(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 57 3e-06
A45483(A45483)chloride channel, CLC-K1 - rat 57 4e-06
CP001291_3505(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 57 4e-06
CP000453_428(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1... 57 4e-06
CR936503_1412(CR936503|pid:none) Lactobacillus sakei strain 23K ... 57 4e-06
AK298285_1(AK298285|pid:none) Homo sapiens cDNA FLJ58602 complet... 57 4e-06
AE010299_3510(AE010299|pid:none) Methanosarcina acetivorans str.... 57 4e-06
BC020873_1(BC020873|pid:none) Homo sapiens chloride channel Kb, ... 56 5e-06
AL355994_12(AL355994|pid:none) Human DNA sequence from clone RP1... 56 5e-06
(P51801) RecName: Full=Chloride channel protein ClC-Kb; ... 56 5e-06
CP001111_3819(CP001111|pid:none) Stenotrophomonas maltophilia R5... 56 5e-06
AM039952_2986(AM039952|pid:none) Xanthomonas campestris pv. vesi... 56 5e-06
AL355994_13(AL355994|pid:none) Human DNA sequence from clone RP1... 56 5e-06
CP001358_313(CP001358|pid:none) Desulfovibrio desulfuricans subs... 56 7e-06
(P51803) RecName: Full=Chloride channel protein ClC-Ka; ... 56 7e-06
AE008692_841(AE008692|pid:none) Zymomonas mobilis subsp. mobilis... 56 7e-06
CP000552_1891(CP000552|pid:none) Prochlorococcus marinus str. MI... 56 7e-06
(P51804) RecName: Full=Chloride channel protein ClC-Kb; ... 56 7e-06
D26111_2(D26111|pid:none) Rattus rattus ClC-K2L and ClC-K2S mRNA... 56 7e-06
AF179611_12(AF179611|pid:none) Zymomonas mobilis ZM4 fosmid clon... 56 7e-06
CP000697_1615(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 55 9e-06
CP000233_1143(CP000233|pid:none) Lactobacillus salivarius UCC118... 55 9e-06
CP000387_1068(CP000387|pid:none) Streptococcus sanguinis SK36, c... 55 9e-06
AE008923_2778(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 55 9e-06
CP000382_1726(CP000382|pid:none) Clostridium novyi NT, complete ... 55 9e-06
CP000576_1893(CP000576|pid:none) Prochlorococcus marinus str. MI... 55 1e-05
CP000099_2153(CP000099|pid:none) Methanosarcina barkeri str. Fus... 55 1e-05
CP001279_1030(CP001279|pid:none) Nautilia profundicola AmH, comp... 55 1e-05
CP000412_1704(CP000412|pid:none) Lactobacillus delbrueckii subsp... 55 1e-05
DQ366743_14(DQ366743|pid:none) Uncultured Prochlorococcus marinu... 55 1e-05
CR954253_2079(CR954253|pid:none) Lactobacillus delbrueckii subsp... 55 1e-05
CP001098_1159(CP001098|pid:none) Halothermothrix orenii H 168, c... 55 2e-05
CP000970_1546(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 55 2e-05
CP001191_765(CP001191|pid:none) Rhizobium leguminosarum bv. trif... 55 2e-05
(B7NUP7) RecName: Full=Voltage-gated ClC-type chloride channel c... 55 2e-05
AM743169_4204(AM743169|pid:none) Stenotrophomonas maltophilia K2... 54 2e-05
BA000045_4182(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 54 3e-05
CP000270_2453(CP000270|pid:none) Burkholderia xenovorans LB400 c... 54 3e-05
CP001154_1075(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 54 3e-05
CP000422_1532(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 54 3e-05
CP000937_870(CP000937|pid:none) Francisella philomiragia subsp. ... 54 3e-05
CP000312_1368(CP000312|pid:none) Clostridium perfringens SM101, ... 54 3e-05
AK290814_1(AK290814|pid:none) Homo sapiens cDNA FLJ76787 complet... 54 3e-05
CP000826_778(CP000826|pid:none) Serratia proteamaculans 568, com... 54 3e-05
AX817291_1(AX817291|pid:none) Sequence 39 from Patent WO02081517. 53 4e-05
CP000394_1855(CP000394|pid:none) Granulibacter bethesdensis CGDN... 53 4e-05
AP008207_2275(AP008207|pid:none) Oryza sativa (japonica cultivar... 53 4e-05
CP001287_3297(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 53 4e-05
CP000490_204(CP000490|pid:none) Paracoccus denitrificans PD1222 ... 53 6e-05
CP000685_4370(CP000685|pid:none) Flavobacterium johnsoniae UW101... 53 6e-05
AE016822_1479(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 52 8e-05
CP000112_3496(CP000112|pid:none) Desulfovibrio desulfuricans G20... 52 8e-05
AJ810447_1(AJ810447|pid:none) Bos taurus partial mRNA for chlori... 52 1e-04
CP001025_1642(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 52 1e-04
CP001291_206(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 52 1e-04
DQ863338_1(DQ863338|pid:none) Francisella tularensis subsp. medi... 52 1e-04
CP001052_2229(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 52 1e-04
DQ863341_1(DQ863341|pid:none) Francisella tularensis subsp. novi... 52 1e-04
CP000099_1770(CP000099|pid:none) Methanosarcina barkeri str. Fus... 52 1e-04
DQ863345_1(DQ863345|pid:none) Francisella tularensis subsp. tula... 52 1e-04
CP000439_1678(CP000439|pid:none) Francisella tularensis subsp. n... 52 1e-04
CP000915_46(CP000915|pid:none) Francisella tularensis subsp. med... 52 1e-04
DQ863339_1(DQ863339|pid:none) Francisella tularensis subsp. medi... 52 1e-04
CP000266_1492(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 52 1e-04
EU048231_1(EU048231|pid:none) Ovis aries chloride channel ClC2 (... 52 1e-04
CP000383_3064(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 52 1e-04
AM233362_101(AM233362|pid:none) Francisella tularensis subsp. ho... 52 1e-04
CP001131_2423(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 52 1e-04
(B5Z428) RecName: Full=Voltage-gated ClC-type chloride channel c... 52 1e-04
(A8A0D3) RecName: Full=Voltage-gated ClC-type chloride channel c... 52 1e-04
CP001472_79(CP001472|pid:none) Acidobacterium capsulatum ATCC 51... 52 1e-04
AE005674_1613(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 52 1e-04
DQ863336_1(DQ863336|pid:none) Francisella tularensis subsp. hola... 52 1e-04
CP000781_2443(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 52 1e-04
AM460113_1(AM460113|pid:none) Vitis vinifera contig VV78X064343.... 52 1e-04
DQ863334_1(DQ863334|pid:none) Francisella tularensis subsp. hola... 52 1e-04
CP000828_897(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 52 1e-04
BA000039_145(BA000039|pid:none) Thermosynechococcus elongatus BP... 52 1e-04
B64915(B64915)probable membrane protein b1592 - Escherichia coli... 52 1e-04
(B1XF57) RecName: Full=Voltage-gated ClC-type chloride channel c... 52 1e-04
(A9MPK6) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &C... 51 2e-04
(B4TXQ7) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &C... 51 2e-04
(B5RHE1) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &A... 51 2e-04
(A9N0Q1) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &(... 51 2e-04
AM942759_2093(AM942759|pid:none) Proteus mirabilis strain HI4320... 51 2e-04
(Q8ZRP8) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &A... 51 2e-04
(Q8Z9B3) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &A... 51 2e-04
AC002328_5(AC002328|pid:none) Genomic sequence for Arabidopsis t... 51 2e-04
AM747720_1803(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 51 2e-04
AP006878_887(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 51 2e-04
CP001472_442(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 51 2e-04
AY080722_1(AY080722|pid:none) Arabidopsis thaliana unknown prote... 51 2e-04
(Q8RXR2) RecName: Full=Chloride channel protein CLC-f; ... 51 2e-04
CP000653_692(CP000653|pid:none) Enterobacter sp. 638, complete g... 51 2e-04
DQ863342_1(DQ863342|pid:none) Francisella tularensis subsp. tula... 51 2e-04
AY871870_1(AY871870|pid:none) Synthetic construct hypothetical p... 51 2e-04
AJ749949_1775(AJ749949|pid:none) Francisella tularensis subsp. t... 51 2e-04
AP008957_5583(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 51 2e-04
DQ863344_1(DQ863344|pid:none) Francisella tularensis subsp. tula... 51 2e-04
CP001279_658(CP001279|pid:none) Nautilia profundicola AmH, compl... 51 2e-04
CR626927_1131(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 50 3e-04
AJ303349_5(AJ303349|pid:none) Capsella rubella ORF1, ORF2, ORF3,... 50 3e-04
CP000868_1515(CP000868|pid:none) Burkholderia multivorans ATCC 1... 50 3e-04
(Q325Y4) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &C... 50 3e-04
AE008918_898(AE008918|pid:none) Brucella melitensis 16M chromoso... 50 3e-04
AE017261_1156(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 50 3e-04
AP003873_1(AP003873|pid:none) Oryza sativa Japonica Group genomi... 50 3e-04
AK293476_1(AK293476|pid:none) Homo sapiens cDNA FLJ59180 complet... 50 3e-04
AP009385_1688(AP009385|pid:none) Burkholderia multivorans ATCC 1... 50 3e-04
(Q8GX93) RecName: Full=Chloride channel protein CLC-e; ... 50 4e-04
CP000569_666(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 50 4e-04
AL022604_1(AL022604|pid:none) Arabidopsis thaliana DNA chromosom... 50 4e-04
CP000271_358(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 50 4e-04
AE017282_2380(AE017282|pid:none) Methylococcus capsulatus str. B... 50 4e-04
CP000240_2093(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 50 4e-04
CP000251_1416(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 50 5e-04
CP000614_1657(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 50 5e-04
AJ303345_5(AJ303345|pid:none) Lycopersicon esculentum lateral su... 50 5e-04
AF0411(AF0411) probable chloride channel protein YPO3388 [import... 50 5e-04
BX936398_743(BX936398|pid:none) Yersinia pseudotuberculosis IP32... 50 5e-04
CP000628_1005(CP000628|pid:none) Agrobacterium radiobacter K84 c... 50 5e-04
(A4TPW7) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &(... 50 5e-04
CP000282_830(CP000282|pid:none) Saccharophagus degradans 2-40, c... 50 5e-04
CP001145_1470(CP001145|pid:none) Coprothermobacter proteolyticus... 50 5e-04
(B5BL83) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &(... 50 5e-04
CP000472_3679(CP000472|pid:none) Shewanella piezotolerans WP3, c... 50 5e-04
EF146944_1(EF146944|pid:none) Populus trichocarpa clone WS01225_... 50 5e-04
A70340(A70340) conserved hypothetical protein aq_438 - Aquifex a... 50 5e-04
BC005749_1(BC005749|pid:none) Mus musculus chloride channel 7, m... 50 5e-04
CU928161_1579(CU928161|pid:none) Escherichia coli S88 chromosome... 49 6e-04
CP000655_550(CP000655|pid:none) Polynucleobacter necessarius sub... 49 6e-04
CP001510_3134(CP001510|pid:none) Methylobacterium extorquens AM1... 49 6e-04
(B5Y1L4) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &C... 49 6e-04
CP001052_1025(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 49 6e-04
(B2U300) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &C... 49 6e-04
(Q87GZ9) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &B... 49 6e-04
CP000151_905(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 49 6e-04
AE014075_1921(AE014075|pid:none) Escherichia coli CFT073, comple... 49 6e-04
CP001068_2657(CP001068|pid:none) Ralstonia pickettii 12J chromos... 49 6e-04
CP000554_2973(CP000554|pid:none) Prochlorococcus marinus str. MI... 49 6e-04
CU651637_1519(CU651637|pid:none) Escherichia coli LF82 chromosom... 49 6e-04
CP000908_3116(CP000908|pid:none) Methylobacterium extorquens PA1... 49 6e-04
AM747720_3027(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 49 8e-04
CP000512_3675(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 49 8e-04
AE017285_450(AE017285|pid:none) Desulfovibrio vulgaris subsp. vu... 49 8e-04
CP001298_3331(CP001298|pid:none) Methylobacterium chloromethanic... 49 8e-04
AM889285_2782(AM889285|pid:none) Gluconacetobacter diazotrophicu... 49 8e-04
CP000010_820(CP000010|pid:none) Burkholderia mallei ATCC 23344 c... 49 0.001
BX571965_1588(BX571965|pid:none) Burkholderia pseudomallei strai... 49 0.001
CP000248_1492(CP000248|pid:none) Novosphingobium aromaticivorans... 49 0.001
CP000239_808(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp... 49 0.001
CP001330_106(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 49 0.001
CP001408_2205(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 49 0.001
CP000584_398(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 49 0.001
CU468135_2902(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 49 0.001
CP001063_1526(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 49 0.001
CP000478_2329(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 49 0.001
EU048232_1(EU048232|pid:none) Ovis aries chloride channel ClC4 (... 48 0.001
AE015928_4648(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 48 0.001
AP006841_1241(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 48 0.001
CP001032_3058(CP001032|pid:none) Opitutus terrae PB90-1, complet... 48 0.001
BX548175_2890(BX548175|pid:none) Prochlorococcus marinus MIT9313... 48 0.001
CP001299_20(CP001299|pid:none) Methylobacterium chloromethanicum... 48 0.001
(B1LGV8) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &(... 48 0.002
(P59639) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &(... 48 0.002
CP000614_887(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 48 0.002
F97460(F97460)hypothetical protein AGR_C_1521 [imported] - Agrob... 48 0.002
CP000100_1255(CP000100|pid:none) Synechococcus elongatus PCC 794... 48 0.002
CP000151_1844(CP000151|pid:none) Burkholderia sp. 383 chromosome... 48 0.002
AE014073_144(AE014073|pid:none) Shigella flexneri 2a str. 2457T,... 48 0.002
(B7LWB6) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &C... 48 0.002
(A1A7K1) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &(... 48 0.002
CP001029_3308(CP001029|pid:none) Methylobacterium populi BJ001, ... 47 0.002
BA000023_2579(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 47 0.002
(Q7MDF0) RecName: Full=H(+)/Cl(-) exchange transporter clcA; &(... 47 0.002
CP000110_2611(CP000110|pid:none) Synechococcus sp. CC9605, compl... 47 0.003
BX294138_33(BX294138|pid:none) Rhodopirellula baltica SH 1 compl... 47 0.003
CP000830_2397(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 47 0.003
CP001103_1583(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 47 0.003
BX569695_310(BX569695|pid:none) Synechococcus sp. WH8102 complet... 47 0.003
AM450484_1(AM450484|pid:none) Vitis vinifera contig VV78X063633.... 47 0.003
CP001403_2240(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 47 0.003
CP000083_4489(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 47 0.004
CP001472_2297(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 47 0.004
CP001404_561(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51,... 47 0.004
CP001401_2072(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 47 0.004
CP001614_2691(CP001614|pid:none) Teredinibacter turnerae T7901, ... 47 0.004
CP000806_78(CP000806|pid:none) Cyanothece sp. ATCC 51142 circula... 47 0.004
CP000390_1038(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 46 0.005
CP001620_1927(CP001620|pid:none) Corynebacterium kroppenstedtii ... 46 0.005
CP000462_3407(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 46 0.005
BC021578_1(BC021578|pid:none) Homo sapiens chloride channel 2, m... 46 0.005
CP000880_1430(CP000880|pid:none) Salmonella enterica subsp. ariz... 46 0.005
AY810456_1(AY810456|pid:none) Schistosoma japonicum SJCHGC02627 ... 46 0.005
CP000644_735(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 46 0.005
CP000958_944(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 46 0.007
CP000668_839(CP000668|pid:none) Yersinia pestis Pestoides F, com... 46 0.007
BA000016_1408(BA000016|pid:none) Clostridium perfringens str. 13... 46 0.007
CP000759_296(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188... 46 0.007
CP000246_1626(CP000246|pid:none) Clostridium perfringens ATCC 13... 46 0.007
CR628336_1865(CR628336|pid:none) Legionella pneumophila str. Par... 46 0.007
CP000136_165(CP000136|pid:none) Rhizobium etli CFN 42 plasmid p4... 46 0.007
CP000675_1978(CP000675|pid:none) Legionella pneumophila str. Cor... 46 0.007
CP000360_1859(CP000360|pid:none) Acidobacteria bacterium Ellin34... 46 0.007
AE009952_2079(AE009952|pid:none) Yersinia pestis KIM, complete g... 46 0.007
(A7FHW4) RecName: Full=Voltage-gated ClC-type chloride channel c... 46 0.007
CP000826_2276(CP000826|pid:none) Serratia proteamaculans 568, co... 46 0.007
CP000950_1954(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 46 0.007
CP000943_5511(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 45 0.009
AF366367_1(AF366367|pid:none) Arabidopsis thaliana CLC-e chlorid... 45 0.009
AE017354_1856(AE017354|pid:none) Legionella pneumophila subsp. p... 45 0.009
CP000712_1839(CP000712|pid:none) Pseudomonas putida F1, complete... 45 0.009
CP001349_4082(CP001349|pid:none) Methylobacterium nodulans ORS 2... 45 0.009
AE006641_2950(AE006641|pid:none) Sulfolobus solfataricus P2, com... 45 0.009
AM902716_3332(AM902716|pid:none) Bordetella petrii strain DSM 12... 45 0.009
CP001322_2845(CP001322|pid:none) Desulfatibacillum alkenivorans ... 45 0.009
CU694388_68(CU694388|pid:none) Ralstonia solanacearum strain Mol... 45 0.012
CP001087_1626(CP001087|pid:none) Desulfobacterium autotrophicum ... 45 0.012
AE007317_1045(AE007317|pid:none) Streptococcus pneumoniae R6, co... 45 0.012
CU695242_167(CU695242|pid:none) Ralstonia solanacearum strain Mo... 45 0.012
A95134(A95134) voltage-gated chloride channel family protein [im... 45 0.012
BX842652_175(BX842652|pid:none) Bdellovibrio bacteriovorus compl... 45 0.012
CU914168_785(CU914168|pid:none) Ralstonia solanacearum strain IP... 45 0.012
CP000919_1022(CP000919|pid:none) Streptococcus pneumoniae JJA, c... 45 0.012
CP001349_5962(CP001349|pid:none) Methylobacterium nodulans ORS 2... 45 0.012
CP001032_2533(CP001032|pid:none) Opitutus terrae PB90-1, complet... 45 0.012
AF418982_10(AF418982|pid:none) Yersinia pseudotuberculosis strai... 45 0.012
CP000936_1163(CP000936|pid:none) Streptococcus pneumoniae Hungar... 45 0.012
CP001025_848(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 45 0.012
CP000628_2814(CP000628|pid:none) Agrobacterium radiobacter K84 c... 45 0.012
CP001129_1020(CP001129|pid:none) Streptococcus equi subsp. zooep... 45 0.016
CP001399_2152(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 45 0.016
CP000931_1027(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 45 0.016
CP000653_573(CP000653|pid:none) Enterobacter sp. 638, complete g... 45 0.016
CP000270_1656(CP000270|pid:none) Burkholderia xenovorans LB400 c... 45 0.016
AP009385_811(AP009385|pid:none) Burkholderia multivorans ATCC 17... 44 0.021
CP000086_1555(CP000086|pid:none) Burkholderia thailandensis E264... 44 0.021
CP000555_110(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 44 0.021
AM933173_1580(AM933173|pid:none) Salmonella enterica subsp. ente... 44 0.021
CP000095_2144(CP000095|pid:none) Prochlorococcus marinus str. NA... 44 0.021
CP000656_1991(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 44 0.021
CP001053_2313(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 44 0.021
CP001636_993(CP001636|pid:none) Variovorax paradoxus S110 chromo... 44 0.021
AJ248284_228(AJ248284|pid:none) Pyrococcus abyssi complete genom... 44 0.021
(A8AGW0) RecName: Full=Voltage-gated ClC-type chloride channel c... 44 0.021
CP000494_4737(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 44 0.027
AM286415_1928(AM286415|pid:none) Yersinia enterocolitica subsp. ... 44 0.027
CR555306_2765(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 44 0.027
FP236842_564(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 44 0.027
AE004439_1417(AE004439|pid:none) Pasteurella multocida subsp. mu... 44 0.027
CU234118_2924(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 44 0.027

>(Q54AX6) RecName: Full=Chloride channel protein A;
&AF414428_1(AF414428|pid:none)
Length = 863

Score = 453 bits (1165), Expect = e-125
Identities = 252/623 (40%), Positives = 344/623 (55%), Gaps = 68/623 (10%)
Frame = +1

Query: 697 SSLNKPLSDRVED---INNQSSMIYDPWRHRGDVNSTYHSSSSVTHRRRNHRLSPLEKQK 867
S ++KP D ++ INN ++ + N+ H S VTHRR H + +K K
Sbjct: 36 SLIHKPYHDDYDENGLINNNNNS----HNNNNGGNNNNHGPSKVTHRRGKHTFTEADKLK 91

Query: 868 MKNIQSLNFSVNDNLLQREEYEKTTKGLHLKKTFGKWIICLFLGVIVGCIAYVIKMVVQL 1047
M +SL+F + DN + RE +T+K H+ KTFGKWIIC +GV+VG AY++K V+
Sbjct: 92 MTKFESLDFPIIDNQIYREYIRRTSKLNHMLKTFGKWIICFMIGVLVGITAYLVKQSVEF 151

Query: 1048 LQGLKFHYTNHYVSNGLQGEAFLTFLGINLLFVFLSCLMVIVAGPLASSSGIPEVKGILN 1227
+ KF + Y+ + + AFL + IN+LF + L++I G +AS SGIPEVKG LN
Sbjct: 152 VNEFKFDQSGKYLEDERKFIAFLVYYSINILFGVSASLVIIPVGQIASGSGIPEVKGYLN 211

Query: 1228 GVKVREALGFRALLGKIXXXXXXXXXXXXXXPEGPMIHIGSAVGAAISQFKSSTMGFYPS 1407
G+++ +++ + L+GK+ PEGPMIHIGS +G AI Q KS T+ +YP
Sbjct: 212 GIRIPQSMNVKTLVGKLVSLILAYSSGLILGPEGPMIHIGSMLGGAIGQVKSKTLKWYPK 271

Query: 1408 LFLSYRNDRDKRDFISIXXXXXXXXXXXXPIGGVLFSIEEVSSFWSRQLTWRTFFTCVIA 1587
+ Y NDRD+RDFIS PIGGVLF EE SSFWSRQLTWRTFF C+IA
Sbjct: 272 VLWKYHNDRDRRDFISTGAAAGVAAAFGAPIGGVLFGFEEASSFWSRQLTWRTFFACLIA 331

Query: 1588 AFTTNFLLQGIGSSPDMHDTGLLTFGFSRLYLFRYSEXXXXXXXXXXXXXXXXXXXXXNI 1767
FTTN +LQG +HD G+L FG S YL++YSE N
Sbjct: 332 TFTTNIILQGF--DMQLHDYGVLKFGLSNKYLYKYSELIPFALIGVAGGLFGALFVNLNA 389

Query: 1768 HLNKWR-KEKLKQNPYLRLFEALFVSVVTSVVCYYASFIFDCRYQSNI------------ 1908
HL++WR K + YLR+ E + +TS + Y + CR ++
Sbjct: 390 HLSQWRSKFFANKKIYLRVLEVFILITITSTILYCCAAFTPCRSKTQANGSQTNSLDTSS 449

Query: 1909 -------------------VIETSVCEDQSNTEMVQFFC--------------------- 1968
++ + ED+ + + FFC
Sbjct: 450 SSILSSSGDNSKNSTKLFKLLNNASGEDKQEDKFIAFFCEQGEYNQMAGLSFNSLDAALR 509

Query: 1969 ------------PPLLVFTLISLFFSIWSSGLWVAGGLFVPMMMVGAGFGRLFGQTISMW 2112
P L VF+LIS + +SGL +A GLF+PMM+VGA FGRL GQ I++
Sbjct: 510 LLFSTSTDIFTIPTLAVFSLISFILTTITSGLMLASGLFIPMMLVGATFGRLVGQVIAL- 568

Query: 2113 FTNIDSSIYALVGSAAMMAGYCRMTVCIVVIMVELTEGTQYLVPIILAVMIXKXVGDFFN 2292
F ++D IYALVG++AMMAG+ RMT+ + +IMVELTEGTQY++P+IL+VMI K VGDFFN
Sbjct: 569 FVSVDPCIYALVGASAMMAGFSRMTISLAIIMVELTEGTQYMLPVILSVMIAKWVGDFFN 628

Query: 2293 ESVYEHLMEXKSIPFLQSKPPXS 2361
ES+YEHL+E K PFLQS+PP S
Sbjct: 629 ESIYEHLIEQKCYPFLQSQPPKS 651

Score = 58.9 bits (141), Expect = 8e-07
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 53/174 (30%)
Frame = -3

Query: 602 QVRLLVNILNSNNH--NAFPVI---------------NSGPYDNQRLYRGIILXDHILVL 474
+V ++ +L S H N FPVI N Y+++ Y G+IL + ++ L
Sbjct: 673 RVSKVIEVLKSEQHFHNGFPVIERPRPLDPNRKDAYGNLEYYEDETTYSGLILRNQLICL 732

Query: 473 LFYRVF------------YXGTGEXIYLXENFD---------------FDKFTTETSKSP 375
L+YR+F G Y F ++ T ++
Sbjct: 733 LYYRIFCHEQPLPQNPRLLGGNSNRRYNQRRFGRPTEYGYAPADPRMTYELMTQSLARHF 792

Query: 374 PPLXEMNFDQFELDS-FIDLRPCM*I--------FSFVEAYKLFXNMGLRHLPV 240
PP+ +MN + E+++ +IDLRP M + +S+ E Y +F +GLRHLPV
Sbjct: 793 PPIDKMNLKKEEIETMYIDLRPYMNLSTIVANETYSYSETYSIFRTIGLRHLPV 846

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,363,754,287
Number of extensions: 64068312
Number of successful extensions: 161648
Number of sequences better than 10.0: 659
Number of HSP's gapped: 160574
Number of HSP's successfully gapped: 936
Length of query: 790
Length of database: 1,051,180,864
Length adjustment: 137
Effective length of query: 653
Effective length of database: 607,772,281
Effective search space: 396875299493
Effective search space used: 396875299493
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.85 gvh: 0.38 alm: 0.41 top: 0.67 tms: 0.00 mit: 0.20 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
36.0 %: nuclear
8.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U15844-1 is cyt

VS (DIR, S) 0
VH (FL, L) 2
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0