Contig-U15838-1
Contig ID Contig-U15838-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15838-1 (Contig-U15838-1Q) /CSM_Contig/Contig-U15838-1Q.Seq.d
GGATATTCAACAAAACTATAAAACTTGAAAAAAAAAAAAAAAAAATAAAA
AAATAAAAAAATAATAATAATAATAATGATAATAATAAAANAAACCTATT
TTTGCTTTTAATTATTAAAAAATGAACACCCGAAATGATAAGGAATTTAA
CTTTATTATCAAAAAGTTCATTAGATCCAAAATGTTTAATCTTAAAACAT
TCAAACAAAAACCTCAATAATTATTTCAAACAAATAACATTTCGTTATTA
TAGTAAAACCAACCCAATCATTAAAACAACAAAATCATAATAATATTAAT
AACTATAATAATACAACACCAGAAACTCAAGAAAGAATTAATGAATTATT
AAAATTATTCCCTCCAATAAAGTATGGATTTGCATATGGTTCAGGTGTAA
TTTCACAAAAAGGTTACAATAGAAATGGTGATGGATCAACCTCAACTGAA
AATCCATCAAAAAAAGAAGAACAATCACCAATGATTGATTTAATATTTGC
TGTTGAAAACTCAACTAAATGGCATTCTCTCAATCTTGTAAATAATCAAT
CACATTATTCTTTTCTTGGTTTGATGGGTGCTCATATAGTTGCAAAAGTT
CAATATATGAATGCTAAAATTTATTTTAATACATTATTAGAACATAATGG
AATTAAATTTAAATATGGTGTTATTGAATATAAAGATTTAATAGATGATT
TAAAGAATTGGAAAACATTATATTTATCAGGTAGAATGCAAAAACCATTT
TCATT----------TAGAATGCAAAAACCCATTTTTCAATTTACCAACA
TCCAAGTACAGAAGGATTGAAAGAGATTCAAGAGGTTAATAGTGAATATA
ATTTAAAAAATGCTGTAATCACATCATTATTAATGTTACCTGAAACATTT
ACAGAGTATGATCTTTATCATACAATCTCAAAACTATCCTATAGTGGTGA
TATAAGAATGAAAGGTGCTGAAAATCCAATGAAAACTCATAATATCGTAA
TTAATAATATTGATGGTTTTAGATCATTACATTTCCCAATCATTAATGAT
CATTTAACTCAATATTTAAATGTAATCTTAGAAAATGGTGATGAAGTTAA
TTCAAGTTTAATTTTATCACAAAATAATAATAATAAAAATAATAATAAAA
ATGAGACAACAACAACAGCAGCACCAAAAATGGTTACATTCAAATCAAAA
CAAGATCCAATGAATTATTTAAATTTATTAATGATGCTACCAGGAAGTAT
TAAATCAACAATGTTAAAAGAAGTTAGAAATAATATGAAATTGATGAAAT
CTGATGAAAAAATTGATCCAACAATACTTCACAATTTAATATTTATGATT
GTTTCAAAAAGTAGTTTCGCTCAAACAGTAAAAGGTGTTTTTACTGCAGG
TATTTCAAAATCCTTAAATTATATGAAATTAAAATTAAAAAAAAATAAAA
AATAATTTTAAAATAATAAATAATAATAATAATAATTTAACAAT

Gap gap included
Contig length 1484
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7334606
End point 7336096
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 5
Link to clone list U15838
List of clone(s)

est1=SLK613F,1,593
est2=CFF180F,123,427
est3=SLK613X,131,755
est4=CFF180Z,756,1423
est5=SLK613Z,1076,1484
Translated Amino Acid sequence
gystkl*nlkkkkkk*knkkiiiiimiiikxtyfcf*llknehpk**gi*lyyqkvh*iq
nv*s*niqtktsiiisnk*HFVIIVKPTQSLKQQNHNNINNYNNTTPETQERINELLKLF
PPIKYGFAYGSGVISQKGYNRNGDGSTSTENPSKKEEQSPMIDLIFAVENSTKWHSLNLV
NNQSHYSFLGLMGAHIVAKVQYMNAKIYFNTLLEHNGIKFKYGVIEYKDLIDDLKNWKTL
YLSGRMQKPFS---

---ECKNPFFNLPTSKYRRIERDSRG***i*fkkccnhiiinvt*niyrv*slsynlkti
l*w*yknerc*ksnens*yrn**y*wf*iitfpnh**sfnsifkcnlrkw**s*fkfnfi
tk****k***k*dnnnsstkngyiqiktrsnelfkfindatrky*innvkrs*k*yeide
i**kn*snntsqfniydcfkk*frsnskrcfycryfkilklyeikikkk*kiilk**iii
iii*q


Translated Amino Acid sequence (All Frames)
Frame A:
gystkl*nlkkkkkk*knkkiiiiimiiikxtyfcf*llknehpk**gi*lyyqkvh*iq
nv*s*niqtktsiiisnk*HFVIIVKPTQSLKQQNHNNINNYNNTTPETQERINELLKLF
PPIKYGFAYGSGVISQKGYNRNGDGSTSTENPSKKEEQSPMIDLIFAVENSTKWHSLNLV
NNQSHYSFLGLMGAHIVAKVQYMNAKIYFNTLLEHNGIKFKYGVIEYKDLIDDLKNWKTL
YLSGRMQKPFS---

---*nakthfsiyqhpsteglkeiqevnseynlknavitsllmlpetfteydlyhtiskl
sysgdirmkgaenpmkthnivinnidgfrslhfpiindhltqylnvilengdevnsslil
sqnnnnknnnknettttaapkmvtfkskqdpmnylnllmmlpgsikstmlkevrnnmklm
ksdekidptilhnlifmivskssfaqtvkgvftagiskslnymklklkknkk*f*nnk**
***fnn

Frame B:
diqqnykt*kkkkknkkikk*********xkpifafny*kmntrndkefnfiikkfirsk
mfnlktfkqkpq*lfqtnnisll**nqpnh*nnkiiiilitiiiqhqklkkelmny*nys
lq*smdlhmvqv*fhkkvtiemvmdqpqlkihqkkknnhq*li*ylllktqlngilsil*
iinhiilflv*wvli*lqkfni*mlkfilihy*nimelnlnmvllniki**mi*rigkhy
iyqvecknhfh---

---rmqkpifqftniqvqkd*krfkrlivnii*kml*shhy*cylkhlqsmifiiqsqny
pivvi*e*kvlkiq*kliis*liilmvldhyisqslmii*lni*m*s*kmvmkliqv*fy
hkiiiikiiikmrqqqqqhqkwlhsnqnkiq*ii*iy**cyqevlnqqc*kkleii*n**
nlmkkliqqyfti*yl*lfqkvvslkq*kvfllqvfqnp*ii*n*n*kkiknnfkiinnn
nnnlt

Frame C:
ifnktiklekkkkkikk*knnnnnndnnkxnlfllliikk*tpemirnltllskssldpk
clilkhsnknlnnyfkqitfryysktnpiikttks**y**l**yntrnsrkn**iikiip
snkvwiciwfrcnftkrlq*kw*winln*ksikkrrtitnd*fnicc*kln*mafsqsck
*sitlffswfdgcsysckssiyec*nlf*yiirt*wn*i*iwcy*i*rfnr*fkelenii
fir*naktifi---

---ECKNPFFNLPTSKYRRIERDSRG***i*fkkccnhiiinvt*niyrv*slsynlkti
l*w*yknerc*ksnens*yrn**y*wf*iitfpnh**sfnsifkcnlrkw**s*fkfnfi
tk****k***k*dnnnsstkngyiqiktrsnelfkfindatrky*innvkrs*k*yeide
i**kn*snntsqfniydcfkk*frsnskrcfycryfkilklyeikikkk*kiilk**iii
iii*q

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15838-1 (Contig-U15838-1Q)
/CSM_Contig/Contig-U15838-1Q.Seq.d
(1494 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15838-1 (Contig-U15838-1Q) /CSM_Contig/Conti... 1933 0.0
Contig-U11462-1 (Contig-U11462-1Q) /CSM_Contig/Conti... 50 1e-05
Contig-U15871-1 (Contig-U15871-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U15783-1 (Contig-U15783-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U14993-1 (Contig-U14993-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U14898-1 (Contig-U14898-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U12368-1 (Contig-U12368-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U12219-1 (Contig-U12219-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U06893-1 (Contig-U06893-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U01480-1 (Contig-U01480-1Q) /CSM_Contig/Conti... 46 2e-04

>Contig-U15838-1 (Contig-U15838-1Q) /CSM_Contig/Contig-U15838-1Q.Seq.d
Length = 1494

Score = 1933 bits (975), Expect = 0.0
Identities = 1019/1026 (99%)
Strand = Plus / Plus


Query: 95 cctatttttgcttttaattattaaaaaatgaacacccgaaatgataaggaatttaacttt 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 cctatttttgcttttaattattaaaaaatgaacacccgaaatgataaggaatttaacttt 154


Query: 155 attatcaaaaagttcattagatccaaaatgtttaatcttaaaacattcaaacaaaaacct 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 attatcaaaaagttcattagatccaaaatgtttaatcttaaaacattcaaacaaaaacct 214


Query: 215 caataattatttcaaacaaataacatttcgttattatagtaaaaccaacccaatcattaa 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 caataattatttcaaacaaataacatttcgttattatagtaaaaccaacccaatcattaa 274


Query: 275 aacaacaaaatcataataatattaataactataataatacaacaccagaaactcaagaaa 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aacaacaaaatcataataatattaataactataataatacaacaccagaaactcaagaaa 334


Query: 335 gaattaatgaattattaaaattattccctccaataaagtatggatttgcatatggttcag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaattaatgaattattaaaattattccctccaataaagtatggatttgcatatggttcag 394


Query: 395 gtgtaatttcacaaaaaggttacaatagaaatggtgatggatcaacctcaactgaaaatc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtgtaatttcacaaaaaggttacaatagaaatggtgatggatcaacctcaactgaaaatc 454


Query: 455 catcnnnnnnngaagaacaatcaccaatgattgatttaatatttgctgttgaaaactcaa 514
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 catcaaaaaaagaagaacaatcaccaatgattgatttaatatttgctgttgaaaactcaa 514


Query: 515 ctaaatggcattctctcaatcttgtaaataatcaatcacattattcttttcttggtttga 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctaaatggcattctctcaatcttgtaaataatcaatcacattattcttttcttggtttga 574


Query: 575 tgggtgctcatatagttgcaaaagttcaatatatgaatgctaaaatttattttaatacat 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tgggtgctcatatagttgcaaaagttcaatatatgaatgctaaaatttattttaatacat 634


Query: 635 tattagaacataatggaattaaatttaaatatggtgttattgaatataaagatttaatag 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tattagaacataatggaattaaatttaaatatggtgttattgaatataaagatttaatag 694


Query: 695 atgatttaaagaattggaaaacattatatttatcaggtagaatgcaaaaaccattttcat 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atgatttaaagaattggaaaacattatatttatcaggtagaatgcaaaaaccattttcat 754


Query: 755 tnnnnnnnnnntagaatgcaaaaacccatttttcaatttaccaacatccaagtacagaag 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tnnnnnnnnnntagaatgcaaaaacccatttttcaatttaccaacatccaagtacagaag 814


Query: 815 gattgaaagagattcaagaggttaatagtgaatataatttaaaaaatgctgtaatcacat 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gattgaaagagattcaagaggttaatagtgaatataatttaaaaaatgctgtaatcacat 874


Query: 875 cattattaatgttacctgaaacatttacagagtatgatctttatcatacaatctcaaaac 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 cattattaatgttacctgaaacatttacagagtatgatctttatcatacaatctcaaaac 934


Query: 935 tatcctatagtggtgatataagaatgaaaggtgctgaaaatccaatgaaaactcataata 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 tatcctatagtggtgatataagaatgaaaggtgctgaaaatccaatgaaaactcataata 994


Query: 995 tcgtaattaataatattgatggttttagatcattacatttcccaatcattaatgatcatt 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 tcgtaattaataatattgatggttttagatcattacatttcccaatcattaatgatcatt 1054


Query: 1055 taactcaatatttaaatgtaatcttagaaaatggtgatgaagttaattcaagtttaattt 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 taactcaatatttaaatgtaatcttagaaaatggtgatgaagttaattcaagtttaattt 1114


Query: 1115 tatcac 1120
||||||
Sbjct: 1115 tatcac 1120


Score = 541 bits (273), Expect = e-153
Identities = 273/273 (100%)
Strand = Plus / Plus


Query: 1153 gagacaacaacaacagcagcaccaaaaatggttacattcaaatcaaaacaagatccaatg 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 gagacaacaacaacagcagcaccaaaaatggttacattcaaatcaaaacaagatccaatg 1212


Query: 1213 aattatttaaatttattaatgatgctaccaggaagtattaaatcaacaatgttaaaagaa 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 aattatttaaatttattaatgatgctaccaggaagtattaaatcaacaatgttaaaagaa 1272


Query: 1273 gttagaaataatatgaaattgatgaaatctgatgaaaaaattgatccaacaatacttcac 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 gttagaaataatatgaaattgatgaaatctgatgaaaaaattgatccaacaatacttcac 1332


Query: 1333 aatttaatatttatgattgtttcaaaaagtagtttcgctcaaacagtaaaaggtgttttt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 aatttaatatttatgattgtttcaaaaagtagtttcgctcaaacagtaaaaggtgttttt 1392


Query: 1393 actgcaggtatttcaaaatccttaaattatatg 1425
|||||||||||||||||||||||||||||||||
Sbjct: 1393 actgcaggtatttcaaaatccttaaattatatg 1425


Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 1 ggatattcaacaaaactataaaacttg 27
|||||||||||||||||||||||||||
Sbjct: 1 ggatattcaacaaaactataaaacttg 27


>Contig-U11462-1 (Contig-U11462-1Q) /CSM_Contig/Contig-U11462-1Q.Seq.d
Length = 1111

Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus


Query: 278 aacaaaatcataataatattaataactataataatac 314
|||||||||||||||||| |||||| ||||||||||
Sbjct: 912 aacaaaatcataataataataataataataataatac 948


>Contig-U15871-1 (Contig-U15871-1Q) /CSM_Contig/Contig-U15871-1Q.Seq.d
Length = 2306

Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 287 ataataatattaataactataataata 313
||||||||||||||||| |||||||||
Sbjct: 1787 ataataatattaataacaataataata 1813


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 53,127
Number of Sequences: 8402
Number of extensions: 53127
Number of successful extensions: 6462
Number of sequences better than 10.0: 1016
length of query: 1494
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1478
effective length of database: 7,941,110
effective search space: 11736960580
effective search space used: 11736960580
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 2.20
Homology vs DNA
Query= Contig-U15838-1 (Contig-U15838-1Q) /CSM_Contig/Contig-U15838-1Q.Seq.d
(1494 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ372276) Dictyostelium discoideum cDNA clone:ddc11o19, 3' ... 704 0.0 2
(FB336641) Sequence 4167 from Patent WO2007110314. 615 0.0 6
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 496 0.0 5
(AU060602) Dictyostelium discoideum slug cDNA, clone SLK613. 367 0.0 4
(BJ358921) Dictyostelium discoideum cDNA clone:ddc11o19, 5' ... 305 e-162 2
(C83964) Dictyostelium discoideum slug cDNA, clone SLK613. 496 e-146 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 42 2e-08 20
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 46 8e-07 16
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 36 7e-06 19
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 7e-06 17
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 46 1e-05 19
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 46 1e-05 17
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 2e-05 16
(FB571381) Sequence 248 from Patent EP1865317. 34 3e-05 14
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 4e-05 17
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 38 5e-05 12
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 9e-05 19
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 42 1e-04 13
(FB571325) Sequence 192 from Patent EP1865317. 34 1e-04 13
(AL844507) Plasmodium falciparum chromosome 8. 32 2e-04 21
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 36 2e-04 13
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 46 7e-04 16
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 40 8e-04 16
(AC201572) Strongylocentrotus purpuratus clone R3-4007L20, W... 46 8e-04 6
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 40 0.001 15
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 34 0.001 20
(EH010874) USDA-FP_183929 Lysiphlebus testaceipes adult whol... 46 0.001 2
(EH010405) USDA-FP_183507 Lysiphlebus testaceipes adult whol... 46 0.001 2
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.002 15
(CZ219123) AIAA-aag17b10.g1 Ancylostoma caninum whole genome... 40 0.002 2
(AL844509) Plasmodium falciparum chromosome 13. 48 0.002 16
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI... 34 0.002 14
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 0.003 20
(BX936428) Zebrafish DNA sequence from clone RP71-19F19 in l... 44 0.003 6
(AL844506) Plasmodium falciparum chromosome 7. 48 0.003 17
(AE017308) Mycoplasma mobile 163K complete genome. 36 0.003 18
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 46 0.004 11
(DB870518) Lipochromis sp. 'matumbi hunter' cDNA clone:hm749... 56 0.004 1
(EY369653) CAXA12476.rev CAXA Helobdella robusta Subtracted ... 54 0.006 2
(DX572450) Phaseolus-Bat-7_01_C05.T3 Phaseolus-Bat-7 Phaseol... 38 0.006 3
(EY369654) CAXA12476.fwd CAXA Helobdella robusta Subtracted ... 54 0.006 2
(AU072318) Dictyostelium discoideum slug cDNA, clone SSE178. 46 0.007 3
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 36 0.007 14
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 46 0.008 14
(AM285305) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 0.010 10
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.011 13
(AB113317) Amblyomma triguttatum mitochondrial DNA, complete... 36 0.011 6
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.011 14
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 38 0.011 17
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 40 0.013 15
(AE016821) Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 0.015 9
(BX005027) Zebrafish DNA sequence from clone DKEY-4C2 in lin... 54 0.016 1
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 0.016 16
(DQ832718) Phytophthora ramorum mitochondrion, complete genome. 32 0.016 10
(EU427470) Phytophthora ramorum strain CBS 101553 mitochondr... 32 0.016 10
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.019 14
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 46 0.019 11
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 38 0.020 13
(AL035476) Plasmodium falciparum MAL4P3. 34 0.021 15
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 38 0.021 19
(CP000361) Arcobacter butzleri RM4018, complete genome. 34 0.021 22
(AC165154) Mus musculus BAC clone RP23-302C3 from chromosome... 40 0.022 7
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 36 0.022 19
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 40 0.025 20
(CR788248) Zebrafish DNA sequence from clone CH211-112B1 in ... 50 0.026 8
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81... 32 0.029 12
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 0.029 20
(BJ396308) Dictyostelium discoideum cDNA clone:dds42p08, 5' ... 50 0.029 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 46 0.031 11
(AC002541) Homo sapiens BAC clone CTB-43K6 from 7, complete ... 46 0.031 8
(CR749761) Zebrafish DNA sequence from clone CH211-215F19 in... 46 0.032 8
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 40 0.036 18
(AE017332) Mycoplasma hyopneumoniae 232, complete genome. 34 0.037 22
(BJ381664) Dictyostelium discoideum cDNA clone:ddc42c10, 3' ... 50 0.039 2
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 46 0.040 12
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 0.040 16
(AX344554) Sequence 5 from Patent WO0200932. 34 0.043 17
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 34 0.044 21
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 0.045 14
(BJ407775) Dictyostelium discoideum cDNA clone:dds43i16, 3' ... 50 0.046 2
(BJ383132) Dictyostelium discoideum cDNA clone:ddc46p22, 3' ... 50 0.046 2
(CR848759) Zebrafish DNA sequence from clone CH211-229D2 in ... 38 0.046 9
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 36 0.047 11
(AX392733) Sequence 23 from Patent WO0212526. 36 0.048 6
(AR707080) Sequence 23 from patent US 6933145. 36 0.048 6
(AC178620) Strongylocentrotus purpuratus clone R3-3021J22, W... 44 0.049 8
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 36 0.051 14
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI... 36 0.053 13
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 0.054 20
(CR392044) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.057 6
(CS468878) Sequence 69 from Patent EP1748080. 36 0.058 16
(CS468877) Sequence 68 from Patent EP1748080. 36 0.058 16
(CS419355) Sequence 69 from Patent WO2006094836. 36 0.058 16
(CS419354) Sequence 68 from Patent WO2006094836. 36 0.058 16
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.059 19
(CR339059) Zebrafish DNA sequence from clone CH211-121I18 in... 52 0.061 1
(AL772300) Zebrafish DNA sequence from clone CH211-165G14. 52 0.061 1
(CU928044) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.061 1
(BX153074) Danio rerio genomic clone DKEY-115I22, genomic su... 52 0.061 1
(BX142880) Danio rerio genomic clone DKEY-110I14, genomic su... 52 0.061 1
(AX345092) Sequence 163 from Patent WO0200928. 36 0.064 6
(EI344871) GM_WBc0090D11.f GM_WBc Glycine max genomic clone ... 34 0.070 4
(AC178133) Strongylocentrotus purpuratus clone R3-3078F18, W... 36 0.072 9
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 32 0.072 18
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g... 30 0.076 11
(AY149028) Plasmodium chabaudi chabaudi strain AS clone YAC1... 32 0.078 10
(AC146058) Pan troglodytes BAC clone RP43-92A10 from chromos... 34 0.087 8
(EF204913) Pleurotus ostreatus mitochondrion, complete genome. 36 0.087 8
(BJ409542) Dictyostelium discoideum cDNA clone:dds42p08, 3' ... 48 0.098 2
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g... 34 0.10 21
(CT009722) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 0.11 11
(AX347077) Sequence 2148 from Patent WO0200928. 34 0.11 9
(U07817) Dictyostelium discoideum AX3 glutamine-asparagine r... 46 0.12 3
(AY160101) Dictyostelium discoideum strain AX4 nucleotide ex... 42 0.13 4
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete... 44 0.13 21
(AC212925) Populus trichocarpa clone POP008-I05, complete se... 36 0.13 8
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 36 0.14 14
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 38 0.15 10
(CP000993) Borrelia recurrentis A1, complete genome. 32 0.15 25
(DD010736) Diagnosis of known genetic Parameters within the ... 42 0.16 19
(AM604399) Entamoeba invadens IP1 GSS, clone inv038h10.q1k. 32 0.16 4
(AC006890) Caenorhabditis elegans clone Y67D8x, *** SEQUENCI... 38 0.17 11
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 40 0.17 14
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 34 0.18 4
(CT573492) Zebrafish DNA sequence from clone DKEY-176M14 in ... 36 0.18 10
(AR584244) Sequence 1 from patent US 6797466. 34 0.19 21
(AR271569) Sequence 1 from patent US 6503729. 34 0.19 21
(CP000742) Methanococcus vannielii SB, complete genome. 34 0.19 22
(AC007646) Drosophila melanogaster, chromosome 3R, region 87... 34 0.20 9
(EX637031) 256608900 Pea aphid whole body normalized full le... 36 0.20 3
(AC214615) Heliconius erato clone BBAM-36L22, WORKING DRAFT ... 44 0.24 10
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 36 0.24 7
(CU914333) Zebrafish DNA sequence from clone CH73-19O15 in l... 50 0.24 1
(CU459027) Zebrafish DNA sequence from clone CH73-281K5 in l... 50 0.24 1
(CR749163) Zebrafish DNA sequence from clone CH211-216B21 in... 50 0.24 1
(BX571960) Zebrafish DNA sequence from clone DKEY-165I8 in l... 50 0.24 1
(AP009268) Solanum lycopersicum genomic DNA, chromosome 8, c... 50 0.24 1
(DD272758) Gene of docosahexanoic acid-producing bacterium. 50 0.24 1
(CU855819) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.24 1
(AC196657) Pan troglodytes chromosome 6 clone CH251-503A4, W... 50 0.24 1
(AZ181782) SP_0186_A1_E11_SP6E Strongylocentrotus purpuratus... 50 0.24 1
(ES476017) gmapht_0010k10.pDNRF2 Gadus morhua heart library ... 50 0.24 1
(ES379855) Blu_Testis_2_K03 Guppy pDNR_LIB Blue Testis Poeci... 50 0.24 1
(EB577661) AGENCOURT_51399851 D. ananassae EST Drosophila an... 50 0.24 1
(CN807553) HDAH11C04.F Leech Haementeria depressa library HD... 50 0.24 1
(BJ381497) Dictyostelium discoideum cDNA clone:ddc41p14, 3' ... 50 0.24 1
(BJ380222) Dictyostelium discoideum cDNA clone:ddc37o07, 3' ... 50 0.24 1
(BJ356167) Dictyostelium discoideum cDNA clone:dda59p08, 3' ... 50 0.24 1
(AB025342) Moritella marina genes, complete cds, similar to ... 50 0.24 1
(BX908756) Zebrafish DNA sequence from clone CH211-190D13 in... 38 0.25 6
(AC116069) Rattus norvegicus clone CH230-209F3, *** SEQUENCI... 36 0.27 8
(AY159036) Dictyostelium discoideum LvsE (lvsE) gene, partia... 34 0.27 5
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 40 0.27 15
(AC177035) Strongylocentrotus purpuratus clone R3-1038H02, W... 48 0.28 4
(BD061520) Genome DNA of symbiotic bacteria of aphid. 34 0.28 21
(AR409405) Sequence 1 from patent US 6632935. 34 0.28 21
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 34 0.28 21
(CU655881) P.sativum DNA sequence from clone JICPSV-598E15. 36 0.28 5
(AX344560) Sequence 11 from Patent WO0200932. 32 0.29 17
(EU024653) Polistes sp. MD1 mitochondrion, partial genome. 38 0.30 8
(AM618361) Entamoeba invadens IP1 GSS, clone inv110h05.p1k. 42 0.30 2
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 44 0.32 13
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 40 0.33 6
(AM423532) Vitis vinifera contig VV78X272044.7, whole genome... 38 0.35 6
(AX344574) Sequence 25 from Patent WO0200932. 36 0.35 16
(AC097305) Rattus norvegicus clone CH230-212P8, *** SEQUENCI... 36 0.36 9
(AE002139) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 32 0.37 6
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 32 0.37 14
(AM180355) Clostridium difficile 630 complete genome. 38 0.38 19
(CT027810) Zebrafish DNA sequence from clone CH211-66E23 in ... 38 0.39 6
(U67923) Dictyostelium discoideum (pXi) mRNA, partial cds. 38 0.40 3
(DQ021446) Daktulosphaira vitifoliae mitochondrion, partial ... 36 0.42 5
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.44 12
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g... 38 0.47 24
(AF538053) Monosiga brevicollis mitochondrion, complete genome. 32 0.48 10
(DD010735) Diagnosis of known genetic Parameters within the ... 46 0.48 15
(CP000382) Clostridium novyi NT, complete genome. 38 0.51 18
(AC127717) Rattus norvegicus clone CH230-36F15, WORKING DRAF... 32 0.52 9
(CU571119) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.53 2
(AC184293) Strongylocentrotus purpuratus clone R3-62E9, WORK... 34 0.53 2
(CU862029) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.53 2
(AC177653) Strongylocentrotus purpuratus clone R3-1020C16, W... 34 0.53 2
(BK000554) TPA_inf: Chlamydomonas reinhardtii chloroplast, c... 34 0.55 13
(DD061418) Methods and nucleic acids for the analysis of he... 32 0.55 6
(AX767540) Sequence 188 from Patent WO03044226. 32 0.55 6
(AX598980) Sequence 320 from Patent WO02077272. 32 0.55 6
(CU861898) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.56 9
(FJ423446) Chlamydomonas reinhardtii strain CC-503 cw92 mt+ ... 34 0.56 13
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 38 0.58 10
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 32 0.59 14
(CU137652) Zebrafish DNA sequence from clone DKEY-70B23 in l... 40 0.60 8
(CR450761) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 0.63 8
(AL772163) Zebrafish DNA sequence from clone CH211-156N3 in ... 40 0.63 7
(AL034556) Plasmodium falciparum MAL3P5. 34 0.64 8
(AL035475) Plasmodium falciparum MAL4P2. 34 0.66 13
(CR450794) Zebrafish DNA sequence from clone CH211-259I2 in ... 44 0.67 5
(BZ088604) lkf92f02.b1 B.oleracea002 Brassica oleracea genom... 34 0.67 3
(CP000312) Clostridium perfringens SM101, complete genome. 36 0.68 17
(ED667297) GM_WBa0095L09.f GM_WBa Glycine max genomic clone ... 36 0.68 2
(EY329935) CAWY3092.rev CAWY Helobdella robusta Subtracted E... 38 0.69 2
(EJ034527) 1095454065282 Global-Ocean-Sampling_GS-26-01-01-1... 38 0.69 2
(ED671644) GM_WBa0105D03.f GM_WBa Glycine max genomic clone ... 36 0.69 2
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple... 32 0.70 21
(CP000016) Candidatus Blochmannia pennsylvanicus str. BPEN, ... 34 0.70 21
(CU930039) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.70 2
(AM435148) Vitis vinifera contig VV78X184530.2, whole genome... 38 0.72 2
(L16900) Yeast intrastrand crosslink recognition protein (Ix... 36 0.75 3
(AC116032) Dictyostelium discoideum chromosome 2 map 4158743... 38 0.78 5
(EF568108) Glossina pallidipes salivary gland hypertrophy vi... 34 0.83 13
(CU571159) Zebrafish DNA sequence from clone CH73-137H6 in l... 38 0.85 5
(AX392737) Sequence 27 from Patent WO0212526. 36 0.89 9
(AR707084) Sequence 27 from patent US 6933145. 36 0.89 9
(AC147975) Pan troglodytes BAC clone CH251-510J15 from chrom... 34 0.90 8
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 46 0.93 13
(CP000393) Trichodesmium erythraeum IMS101, complete genome. 40 0.94 21
(AF323670) Bacteriophage bIL309, complete genome. 36 0.95 7
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 36 0.96 13
(CR846078) Zebrafish DNA sequence from clone DKEY-145P15 in ... 48 0.96 1
(BX323866) Zebrafish DNA sequence from clone CH211-278M12 in... 48 0.96 1
(BX000467) Zebrafish DNA sequence from clone CH211-1K7 in li... 48 0.96 1
(AL928671) Zebrafish DNA sequence from clone CH211-39M14. 48 0.96 1
(AL844152) Zebrafish DNA sequence from clone DKEY-37L7. 48 0.96 1
(AL844141) Zebrafish DNA sequence from clone DKEY-30K6 in li... 48 0.96 1
(BV021585) S212P60477FB5.T0 CZECHII/Ei Mus musculus STS geno... 48 0.96 1
(AC160397) Mus musculus 6 BAC RP23-279I21 (Roswell Park Canc... 48 0.96 1
(AC153602) Mus musculus 6 BAC RP23-374K11 (Roswell Park Canc... 48 0.96 1
(AC163741) Pan troglodytes BAC clone CH251-406E22 from chrom... 48 0.96 1
(AC159218) Pan troglodytes BAC clone CH251-59O2 from chromos... 48 0.96 1
(AC159108) Pan troglodytes BAC clone CH251-550P7 from chromo... 48 0.96 1
(EA024273) Sequence 1189 from patent US 7135558. 48 0.96 1
(EA024271) Sequence 1186 from patent US 7135558. 48 0.96 1
(EA023723) Sequence 364 from patent US 7135558. 48 0.96 1
(CQ597149) Sequence 24907 from Patent WO0171042. 48 0.96 1
(CQ597143) Sequence 24901 from Patent WO0171042. 48 0.96 1
(CQ579470) Sequence 7228 from Patent WO0171042. 48 0.96 1
(U59147) Drosophila melanogaster Oregon R vacuolar ATPase su... 48 0.96 1
(EF565777) Astrotoma agassizii haplotype C33 cytochrome oxid... 48 0.96 1
(EF565762) Astrotoma agassizii haplotype C18 cytochrome oxid... 48 0.96 1
(EF565761) Astrotoma agassizii haplotype C17 cytochrome oxid... 48 0.96 1
(EF565750) Astrotoma agassizii haplotype C6 cytochrome oxida... 48 0.96 1
(EF565745) Astrotoma agassizii haplotype C1 cytochrome oxida... 48 0.96 1
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 48 0.96 1
(AC009352) Drosophila melanogaster, chromosome 2L, region 34... 48 0.96 1
(AC008332) Drosophila melanogaster, chromosome 2L, region 34... 48 0.96 1
(CR854978) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.96 1
(CR457448) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 48 0.96 1
(AC201390) Strongylocentrotus purpuratus clone R3-17I17, WOR... 48 0.96 1
(AC201047) Strongylocentrotus purpuratus clone R3-12M23, WOR... 48 0.96 1
(AC194283) Zea mays chromosome 5 clone CH201-286G3; ZMMBBc02... 48 0.96 1
(AC184378) Strongylocentrotus purpuratus clone R3-1017J14, W... 48 0.96 1
(AC180725) Strongylocentrotus purpuratus clone R3-3083I23, W... 48 0.96 1
(AC180685) Strongylocentrotus purpuratus clone R3-3089C18, W... 48 0.96 1
(AC180642) Strongylocentrotus purpuratus clone R3-3089N19, W... 48 0.96 1
(AC179974) Strongylocentrotus purpuratus clone R3-3036E16, W... 48 0.96 1
(AC176938) Strongylocentrotus purpuratus clone R3-33M12, WOR... 48 0.96 1
(AC174548) Strongylocentrotus purpuratus clone R3-3044C1, WO... 48 0.96 1
(AC014144) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 48 0.96 1
(AY811486) Schistosoma japonicum SJCHGC03849 protein mRNA, p... 48 0.96 1
(BH044423) RPCI-24-242D10.TJ RPCI-24 Mus musculus genomic cl... 48 0.96 1
(EF947466) Mus musculus C57BL/6N IST12538H12BBF1 gene trap e... 48 0.96 1
(CW621712) OP__Ba0019N06.f OP__Ba Oryza punctata genomic clo... 48 0.96 1
(BX125569) Danio rerio genomic clone DKEY-69B16, genomic sur... 48 0.96 1
(EL505188) F07_1469_302.AB1 Blood stage Plasmodium falciparu... 48 0.96 1
(EL505164) F06_1469_1.AB1 Blood stage Plasmodium falciparum ... 48 0.96 1
(DK173545) Oryzias latipes cDNA, clone: olec44e02, 3' end. 48 0.96 1
(DK122222) Oryzias latipes cDNA, clone: oleb27o12, 3' end. 48 0.96 1
(DK113129) Oryzias latipes cDNA, clone: oleb2g16, 3' end. 48 0.96 1
(DK089998) Oryzias latipes cDNA, clone: oleb2g16, 5' end. 48 0.96 1
(AU087262) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 48 0.96 1
(CV750500) sjl3-007_F05_sjl3-007F05-T3_045.ab1 SJL Schistoso... 48 0.96 1
(AM365163) Oryzias latipes EST, clone FOE002-P00063-DPE-R_P08. 48 0.96 1
(EX610365) 255371698 Pea aphid whole body normalized full le... 48 0.96 1
(AC211087) Solanum lycopersicum chromosome 6 clone C06SLm013... 40 0.96 9
(CV672507) RET7SJ_02C05.T7 Schistosoma japonicum reverse cDN... 40 0.97 3
(AC149430) Populus trichocarpa clone Pop1-116F13, complete s... 36 0.99 9
(EY388858) CAXA753.rev CAXA Helobdella robusta Subtracted La... 38 1.0 2
(CZ955948) 272415 Tomato EcoRI BAC Library Solanum lycopersi... 38 1.0 3
(AC216424) Solanum lycopersicum chromosome 7 clone C07HBa017... 34 1.0 6
(AJ235272) Rickettsia prowazekii strain Madrid E, complete g... 34 1.1 13
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 34 1.1 14
(AB257241) Drinomyia hokkaidensis mitochondrial gene for 16S... 34 1.1 3
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 32 1.1 14
(U87145) Toxoplasma gondii chloroplast, complete genome. 34 1.1 6
(CP000395) Borrelia afzelii PKo, complete genome. 36 1.1 19
(DX951268) CHORI105-44D20.TR CHORI105.pEpiFOS5 Trypanosoma c... 46 1.1 2
(BD460447) Diagnosis of Diseases Associated with Cell Cycle. 34 1.2 5
(BD452369) Diagnosis of Diseases Associated with Cell Cycle. 34 1.2 5
(AX348764) Sequence 222 from Patent WO0202807. 34 1.2 5
(AX344377) Sequence 224 from Patent WO0200926. 34 1.2 5
(AX251983) Sequence 244 from Patent WO0168911. 34 1.2 5
(AC151963) Glycine max clone gmw1-21f22, complete sequence. 46 1.2 9
(CR388218) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 1.2 11
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 32 1.2 11
(CP000728) Clostridium botulinum F str. Langeland, complete ... 38 1.2 17
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 36 1.2 12
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 36 1.3 9
(BJ388752) Dictyostelium discoideum cDNA clone:dds16i01, 5' ... 46 1.3 2
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 30 1.3 8
(AC111760) Rattus norvegicus clone CH230-236H21, WORKING DRA... 36 1.3 12
(AU038072) Dictyostelium discoideum slug cDNA, clone SSH233. 32 1.3 3
(BH138950) ENTMY43TR Entamoeba histolytica Sheared DNA Entam... 30 1.3 4
(CK404751) AUF_IfSpn_231_e22 Ictalurus furcatus spleen cDNA ... 46 1.3 2
(FP015985) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.3 9
(BX942827) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 1.3 8
(AC110197) Mus musculus chromosome 1, clone RP24-405O20, com... 40 1.3 9
(BW651357) Glycine max cDNA clone: GMFL01-02-H04, 5'end. 36 1.4 3
(AF238312) Dictyostelium discoideum putative serine-threonin... 38 1.4 4
(EJ503972) 1095403672836 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.4 2
(AC189269) Brassica rapa subsp. pekinensis clone KBrB023B16,... 38 1.4 6
(FP015875) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.4 6
(AE002102) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 1.4 5
(DU456883) 1098415954176 CHORI-243 Ovis aries genomic clone ... 40 1.4 2
(AP010897) Solanum lycopersicum DNA, chromosome 8, clone: C0... 38 1.4 5
(CR926466) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 1.4 4
(AC171128) Helobdella robusta clone CH306-1A10, complete seq... 38 1.5 5
(AC164317) Bos taurus clone CH240-229P17, WORKING DRAFT SEQU... 38 1.5 7
(AM436772) Vitis vinifera contig VV78X170396.19, whole genom... 46 1.5 2
(DB964157) Glycine max cDNA, clone: GMFL02-25-E03, 5'end. 36 1.5 3
(BX248502) Zebrafish DNA sequence from clone DKEY-284M10 in ... 44 1.6 6
(AF045453) Dictyostelium discoideum protein kinase YakA (yak... 38 1.6 2
(AC215462) Solanum lycopersicum chromosome 2 clone C02SLe009... 44 1.6 6
(DB965972) Glycine max cDNA, clone: GMFL02-30-E20, 5'end. 36 1.6 3
(CT737192) Zebrafish DNA sequence from clone DKEYP-106E12 in... 38 1.6 5
(AX356493) Sequence 127 from Patent WO0181622. 30 1.6 9
(AX347026) Sequence 2097 from Patent WO0200928. 30 1.6 9
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 36 1.7 11
(CT967319) M.truncatula DNA sequence from clone MTH2-59J17 o... 38 1.7 6
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 38 1.7 9
(AP003841) Oryza sativa Japonica Group genomic DNA, chromoso... 42 1.7 3
(BJ441521) Dictyostelium discoideum cDNA clone:ddv46p19, 3' ... 32 1.8 3
(AC161124) Pan troglodytes BAC clone CH251-660C11 from chrom... 46 1.8 7
(DQ927305) Tetrahymena pigmentosa strain UM1060 mitochondrio... 34 1.9 8
(AC232587) Brassica rapa subsp. pekinensis clone KBrB027J02,... 38 1.9 7
(BX942834) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 1.9 2
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 32 1.9 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 32 1.9 13
(BX548059) Zebrafish DNA sequence from clone DKEYP-80D11 in ... 34 1.9 2
(AM447695) Vitis vinifera contig VV78X229092.5, whole genome... 46 1.9 2
(BX936384) Zebrafish DNA sequence from clone CH211-76M11 in ... 34 1.9 2
(BX004760) Zebrafish DNA sequence from clone CH211-222O4 in ... 36 1.9 2
(AM467997) Vitis vinifera contig VV78X073030.4, whole genome... 36 1.9 6
(CT608601) Danio rerio EST, clone ZF_mu_146j06 5'. 38 1.9 2
(BX000703) Zebrafish DNA sequence from clone CH211-276I6 in ... 34 1.9 2
(CR388085) Zebrafish DNA sequence from clone CH211-232D10. 34 1.9 2
(DB962565) Glycine max cDNA, clone: GMFL02-20-N18, 5'end. 36 1.9 3
(CQ580145) Sequence 7903 from Patent WO0171042. 46 2.0 4
(G61153) SHGC-84848 Human Homo sapiens STS genomic, sequence... 38 2.0 2
(B84687) RPCI11-27H2.TP RPCI-11 Homo sapiens genomic clone R... 38 2.0 2
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 32 2.0 15
(AC182948) Bos taurus clone CH240-195M20, WORKING DRAFT SEQU... 34 2.0 9
(CT573165) Zebrafish DNA sequence from clone DKEY-31K9 in li... 36 2.0 2
(AJ291748) Plasmodium falciparum myb2 gene for transcription... 36 2.0 4
(AC005889) Drosophila melanogaster, chromosome 2L, region 30... 34 2.1 8
(AC177480) Strongylocentrotus purpuratus clone R3-61H2, WORK... 46 2.1 7
(EU275726) Polysphondylium pallidum strain PN500 mitochondri... 36 2.1 8
(CU633973) Zebrafish DNA sequence from clone CH73-89A11 in l... 32 2.1 2
(BX936370) Zebrafish DNA sequence from clone DKEY-193B19 in ... 46 2.1 6
(AC154852) Mus musculus BAC clone RP23-33B19 from 16, comple... 36 2.1 7
(CU467645) Zebrafish DNA sequence from clone DKEY-16P14 in l... 44 2.1 4
(BX321882) Zebrafish DNA sequence from clone DKEYP-30F1 in l... 42 2.1 9
(CT998559) Zebrafish DNA sequence from clone DKEY-192J13 in ... 38 2.2 7
(CP000087) Rickettsia bellii RML369-C, complete genome. 36 2.2 21
(AC151695) Gallus gallus clone WAG-63C9, WORKING DRAFT SEQUE... 46 2.2 3
(DR689940) EST1080026 Normalized pine embryo library, Lib_D ... 34 2.2 3
(AE014135) Drosophila melanogaster chromosome 4, complete se... 36 2.2 11
(CS623679) Sequence 230 from Patent WO2006071466. 34 2.3 2
(CS623551) Sequence 102 from Patent WO2006071466. 34 2.3 2
(DD391901) Method and nucleic acids for the improved treatme... 32 2.3 2
(DD391627) Method and nucleic acids for the improved treatme... 32 2.3 2
(DD209258) test. 32 2.3 2
(DD209130) test. 32 2.3 2
(CQ807157) Sequence 607 from Patent WO2004035803. 32 2.3 2
(CQ806883) Sequence 333 from Patent WO2004035803. 32 2.3 2
(BD452842) Diagnosis of Diseases Associated with tumor suppr... 32 2.3 2
(AX826095) Sequence 347 from Patent WO03072821. 32 2.3 2
(AX825967) Sequence 219 from Patent WO03072821. 32 2.3 2
(AX822455) Sequence 347 from Patent EP1340818. 32 2.3 2
(AX822327) Sequence 219 from Patent EP1340818. 32 2.3 2
(AX795935) Sequence 278 from Patent WO03052135. 32 2.3 2
(AX795819) Sequence 162 from Patent WO03052135. 32 2.3 2
(AX349171) Sequence 97 from Patent WO0202808. 32 2.3 2
(AX347450) Sequence 97 from Patent WO0200705. 32 2.3 2
(AX346718) Sequence 1789 from Patent WO0200928. 32 2.3 2
(AX251321) Sequence 289 from Patent WO0168912. 32 2.3 2
(AC159050) Bos taurus clone CH240-64F24, WORKING DRAFT SEQUE... 38 2.3 7
(AC186384) Pan troglodytes BAC clone CH251-680J1 from chromo... 34 2.3 10
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 2.3 15
(DJ436520) Method for the analysis of gynaecological cell pr... 32 2.3 2
(DJ436498) Method for the analysis of gynaecological cell pr... 32 2.3 2
(CS256755) Sequence 56 from Patent WO2006002344. 32 2.3 2
(CS256749) Sequence 50 from Patent WO2006002344. 32 2.3 2
(CS105967) Sequence 52 from Patent WO2005049861. 32 2.3 2
(CS105945) Sequence 30 from Patent WO2005049861. 32 2.3 2
(CQ977470) Sequence 56 from Patent WO2005001140. 32 2.3 2
(CQ977464) Sequence 50 from Patent WO2005001140. 32 2.3 2
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont... 30 2.3 8
(AY955840) Paracoccidioides brasiliensis strain Pb18 mitocho... 34 2.4 10
(CO175303) NDL1_53_G01.g1_A029 Needles control Pinus taeda c... 34 2.4 3
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 40 2.4 12
(AC187169) Glycine max clone gmp1-115j1, complete sequence. 46 2.5 4
(CR848706) Zebrafish DNA sequence from clone CH211-113K17 in... 36 2.5 7
(CP000976) Borrelia duttonii Ly, complete genome. 34 2.5 22
(AC217570) Populus trichocarpa clone POP028-M02, complete se... 38 2.5 6
(DT635751) EST1150682 Normalized pine embryo library, Lib_D ... 34 2.5 3
(EY436189) qm_NP32R.H07 Milwaukee estuary quagga mussel gill... 36 2.5 2
(AX344559) Sequence 10 from Patent WO0200932. 32 2.5 13
(AM712880) Actenodia denticulata 5.8S genomic DNA gene (part... 32 2.6 2
(AG350139) Mus musculus molossinus DNA, clone:MSMg01-146K14.... 34 2.6 3
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61... 42 2.6 12
(BD428972) Method and nucleic acids for pharmacogenomic meth... 34 2.7 5
(AX348451) Sequence 146 from Patent WO0202806. 34 2.7 5
(AX346985) Sequence 2056 from Patent WO0200928. 34 2.7 5
(AC168692) Strongylocentrotus purpuratus clone R3-3014I4, WO... 36 2.7 6
(EL499975) 005_PFLAB1-M-P18B.AB1 Blood stage Plasmodium falc... 34 2.7 3
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 32 2.7 15
(AF547983) Schizosaccharomyces japonicus mitochondrial DNA, ... 30 2.7 9
(CT009570) Zebrafish DNA sequence from clone CH211-185J11 in... 36 2.8 9
(DR690209) EST1080295 Normalized pine embryo library, Lib_D ... 34 2.8 3
(DT635949) EST1150880 Normalized pine embryo library, Lib_D ... 34 2.8 3
(AC126407) Homo sapiens chromosome 15, clone RP11-73C9, comp... 38 2.8 6
(CU640397) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 2.8 8
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 34 2.8 13
(DR097748) STRR1_36_F02.g3_A033 Stem Response Resistant Pinu... 34 2.9 3
(AC104811) Homo sapiens BAC clone RP11-653L5 from 4, complet... 32 2.9 7
(AF303741) Chilo iridescent virus complete genome. 30 2.9 15
(BX005297) Zebrafish DNA sequence from clone CH211-271B8 in ... 34 3.0 7
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 32 3.0 7
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 3.0 13
(CR848665) Zebrafish DNA sequence from clone CH211-276C2 in ... 38 3.1 7
(BX119902) Zebrafish DNA sequence from clone CH211-137I24 in... 36 3.1 12
(AC180453) Strongylocentrotus purpuratus clone R3-3009O16, W... 32 3.1 9
(AM469485) Vitis vinifera, whole genome shotgun sequence, co... 34 3.1 6
(AC213922) Populus trichocarpa clone POP037-A02, complete se... 44 3.1 6
(AF361947) Dictyostelium discoideum SgcA (sgcA) mRNA, comple... 40 3.2 4
(BX537340) Zebrafish DNA sequence from clone DKEYP-93A2 in l... 32 3.2 11
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 34 3.2 9
(DR397353) USDA-FP_157292 Adult Alate Aphis gossypii (WHAGA)... 38 3.2 2
(AC152838) Bos taurus clone CH240-5D10, WORKING DRAFT SEQUEN... 40 3.2 8
(BB938700) Trifolium pratense cDNA clone:RCC11993. 32 3.3 4
(BJ363725) Dictyostelium discoideum cDNA clone:ddc28l04, 5' ... 40 3.4 2
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 36 3.5 17
(AC184421) Strongylocentrotus purpuratus clone R3-3114B21, W... 36 3.5 7
(AM446736) Vitis vinifera contig VV78X197703.18, whole genom... 42 3.5 3
(EG345866) SAAH-aad09c09.b1 Agen 0058 Schmidtea mediterranea... 40 3.5 2
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 32 3.6 7
(DR052772) RTCA1_6_F09.g1_A029 Roots minus calcium Pinus tae... 34 3.6 3
(AL954358) Zebrafish DNA sequence from clone CH211-226D12. 38 3.6 8
(AC178060) Strongylocentrotus purpuratus clone R3-3056K24, W... 44 3.6 3
(AL929123) Mouse DNA sequence from clone RP23-328K3 on chrom... 46 3.6 7
(AX323644) Sequence 132 from Patent WO0192565. 34 3.6 5
(EG353099) SAAH-aad28e03.b1 Agen 0058 Schmidtea mediterranea... 40 3.7 2
(BX470188) Zebrafish DNA sequence from clone DKEY-206F10 in ... 40 3.7 4
(CU571160) Zebrafish DNA sequence from clone CH73-160J1 in l... 46 3.8 1
(CU570976) Zebrafish DNA sequence from clone CH211-90H23 in ... 46 3.8 1
(CU570884) Zebrafish DNA sequence from clone CH73-201B6 in l... 46 3.8 1
(CU539139) Zebrafish DNA sequence from clone CH73-269M4 in l... 46 3.8 1
(CU468916) Zebrafish DNA sequence from clone CH211-22C18 in ... 46 3.8 1
(CU467640) Zebrafish DNA sequence from clone CH73-37N22 in l... 46 3.8 1
(CU467042) Zebrafish DNA sequence from clone CH73-49C19 in l... 46 3.8 1
(CU457800) Zebrafish DNA sequence from clone DKEY-83I22. 46 3.8 1
(CU210942) Zebrafish DNA sequence from clone CH73-128K20 in ... 46 3.8 1
(CT990570) Zebrafish DNA sequence from clone DKEY-13A11 in l... 46 3.8 1
(CT990569) Zebrafish DNA sequence from clone DKEY-33H4 in li... 46 3.8 1
(CT956028) Zebrafish DNA sequence from clone CH211-86G1 in l... 46 3.8 1
(CT737139) Zebrafish DNA sequence from clone DKEYP-7C9 in li... 46 3.8 1
(CT025909) Zebrafish DNA sequence from clone DKEY-254E7 in l... 46 3.8 1
(CR936950) Zebrafish DNA sequence from clone CH211-58J23 in ... 46 3.8 1
(CR936437) Zebrafish DNA sequence from clone CH211-197I23 in... 46 3.8 1
(CR936412) Zebrafish DNA sequence from clone DKEY-181M21 in ... 46 3.8 1
(CR925753) Zebrafish DNA sequence from clone CH211-222B21 in... 46 3.8 1
(CR925705) Zebrafish DNA sequence from clone DKEY-1A5 in lin... 46 3.8 1
(CR854915) Zebrafish DNA sequence from clone DKEY-4G13 in li... 46 3.8 1
(CR848835) Zebrafish DNA sequence from clone DKEY-71G12 in l... 46 3.8 1
(CR848682) Zebrafish DNA sequence from clone CH211-286K10 in... 46 3.8 1
(CR848021) Zebrafish DNA sequence from clone DKEY-219E21 in ... 46 3.8 1
(CR847968) Zebrafish DNA sequence from clone CH211-203D7 in ... 46 3.8 1
(CR847897) Zebrafish DNA sequence from clone DKEY-90L8 in li... 46 3.8 1
(CR759840) Zebrafish DNA sequence from clone DKEY-239O7 in l... 46 3.8 1
(CR751605) Zebrafish DNA sequence from clone DKEY-25J15 in l... 46 3.8 1
(CR678070) Zebrafish DNA sequence from clone DKEY-261H17 in ... 46 3.8 1
(CR548627) Zebrafish DNA sequence from clone DKEYP-24A7 in l... 46 3.8 1
(CR545479) Zebrafish DNA sequence from clone CH211-219M24 in... 46 3.8 1
(CR538727) Zebrafish DNA sequence from clone DKEY-9G20 in li... 46 3.8 1
(CR396589) Zebrafish DNA sequence from clone CH211-139L2 in ... 46 3.8 1
(CR391989) Zebrafish DNA sequence from clone DKEY-263H23 in ... 46 3.8 1
(CR388161) Zebrafish DNA sequence from clone CH211-288B17 in... 46 3.8 1
(CR385040) Zebrafish DNA sequence from clone DKEYP-101C8 in ... 46 3.8 1
(CR384099) Zebrafish DNA sequence from clone DKEY-266I18 in ... 46 3.8 1
(CR354563) Zebrafish DNA sequence from clone DKEY-210I1 in l... 46 3.8 1
(CR354535) Zebrafish DNA sequence from clone CH211-199M16 in... 46 3.8 1
(CR318629) Zebrafish DNA sequence from clone DKEY-30I24 in l... 46 3.8 1
(BX950187) Zebrafish DNA sequence from clone CH211-15O14 in ... 46 3.8 1
(BX927392) Zebrafish DNA sequence from clone DKEY-17E11 in l... 46 3.8 1
(BX908754) Zebrafish DNA sequence from clone DKEY-196D8 in l... 46 3.8 1
(BX901901) Zebrafish DNA sequence from clone CH211-223B8 in ... 46 3.8 1
(BX890570) Zebrafish DNA sequence from clone DKEYP-7F1 in li... 46 3.8 1
(BX890539) Zebrafish DNA sequence from clone CH211-241B2. 46 3.8 1
(BX842702) Zebrafish DNA sequence from clone DKEY-226D17 in ... 46 3.8 1
(BX784032) Zebrafish DNA sequence from clone CH211-87N12 in ... 46 3.8 1
(BX649593) Zebrafish DNA sequence from clone CH211-12G4 in l... 46 3.8 1

>(BJ372276) Dictyostelium discoideum cDNA clone:ddc11o19, 3' end,
single read.
Length = 667

Score = 704 bits (355), Expect(2) = 0.0
Identities = 355/355 (100%)
Strand = Plus / Minus


Query: 766 tagaatgcaaaaacccatttttcaatttaccaacatccaagtacagaaggattgaaagag 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tagaatgcaaaaacccatttttcaatttaccaacatccaagtacagaaggattgaaagag 608


Query: 826 attcaagaggttaatagtgaatataatttaaaaaatgctgtaatcacatcattattaatg 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 attcaagaggttaatagtgaatataatttaaaaaatgctgtaatcacatcattattaatg 548


Query: 886 ttacctgaaacatttacagagtatgatctttatcatacaatctcaaaactatcctatagt 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttacctgaaacatttacagagtatgatctttatcatacaatctcaaaactatcctatagt 488


Query: 946 ggtgatataagaatgaaaggtgctgaaaatccaatgaaaactcataatatcgtaattaat 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggtgatataagaatgaaaggtgctgaaaatccaatgaaaactcataatatcgtaattaat 428


Query: 1006 aatattgatggttttagatcattacatttcccaatcattaatgatcatttaactcaatat 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aatattgatggttttagatcattacatttcccaatcattaatgatcatttaactcaatat 368


Query: 1066 ttaaatgtaatcttagaaaatggtgatgaagttaattcaagtttaattttatcac 1120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttaaatgtaatcttagaaaatggtgatgaagttaattcaagtttaattttatcac 313

Score = 504 bits (254), Expect(2) = 0.0
Identities = 254/254 (100%)
Strand = Plus / Minus


Query: 1153 gagacaacaacaacagcagcaccaaaaatggttacattcaaatcaaaacaagatccaatg 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gagacaacaacaacagcagcaccaaaaatggttacattcaaatcaaaacaagatccaatg 221


Query: 1213 aattatttaaatttattaatgatgctaccaggaagtattaaatcaacaatgttaaaagaa 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aattatttaaatttattaatgatgctaccaggaagtattaaatcaacaatgttaaaagaa 161


Query: 1273 gttagaaataatatgaaattgatgaaatctgatgaaaaaattgatccaacaatacttcac 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gttagaaataatatgaaattgatgaaatctgatgaaaaaattgatccaacaatacttcac 101


Query: 1333 aatttaatatttatgattgtttcaaaaagtagtttcgctcaaacagtaaaaggtgttttt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 aatttaatatttatgattgtttcaaaaagtagtttcgctcaaacagtaaaaggtgttttt 41


Query: 1393 actgcaggtatttc 1406
||||||||||||||
Sbjct: 40 actgcaggtatttc 27

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,992,570,005
Number of extensions: 136103025
Number of successful extensions: 12781192
Number of sequences better than 10.0: 1038
Length of query: 1494
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1470
Effective length of database: 96,409,374,237
Effective search space: 141721780128390
Effective search space used: 141721780128390
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U15838-1 (Contig-U15838-1Q) /CSM_Contig/Contig-U15838-1Q.Seq.d
(1494 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

FB336643_1(FB336643|pid:none) Sequence 4169 from Patent WO200711... 164 8e-39
AM269982_20(AM269982|pid:none) Aspergillus niger contig An01c035... 163 1e-38
CR382129_471(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 160 1e-37
FB336627_1(FB336627|pid:none) Sequence 4153 from Patent WO200711... 156 2e-36
FB336621_1(FB336621|pid:none) Sequence 4147 from Patent WO200711... 154 6e-36
AM920431_1262(AM920431|pid:none) Penicillium chrysogenum Wiscons... 151 7e-35
(Q8INF2) RecName: Full=MMP37-like protein, mitochondrial; Flags:... 147 1e-33
CR382123_103(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 146 2e-33
BX908808_32(BX908808|pid:none) Neurospora crassa DNA linkage gro... 145 3e-33
BT011484_1(BT011484|pid:none) Drosophila melanogaster RE04953 fu... 145 4e-33
CR382138_820(CR382138|pid:none) Debaryomyces hansenii strain CBS... 144 8e-33
(Q6DJM2) RecName: Full=MMP37-like protein, mitochondrial; Flags:... 144 1e-32
FB336637_1(FB336637|pid:none) Sequence 4163 from Patent WO200711... 143 1e-32
FB336651_1(FB336651|pid:none) Sequence 4177 from Patent WO200711... 143 1e-32
FB336645_1(FB336645|pid:none) Sequence 4171 from Patent WO200711... 141 5e-32
(Q32L81) RecName: Full=MMP37-like protein, mitochondrial; Flags:... 140 9e-32
FB336649_1(FB336649|pid:none) Sequence 4175 from Patent WO200711... 140 1e-31
CU928170_102(CU928170|pid:none) Kluyveromyces thermotolerans str... 134 7e-30
(P53230) RecName: Full=Mitochondrial import protein MMP37; AltNa... 132 3e-29
AK229377_1(AK229377|pid:none) Arabidopsis thaliana mRNA for hypo... 132 4e-29
(Q9N4G7) RecName: Full=MMP37-like protein, mitochondrial; Flags:... 130 1e-28
BT080627_1(BT080627|pid:none) Caligus clemensi clone ccle-evs-51... 128 5e-28
AP007161_642(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 128 6e-28
FB336601_1(FB336601|pid:none) Sequence 4127 from Patent WO200711... 127 1e-27
(Q61X59) RecName: Full=MMP37-like protein, mitochondrial; Flags:... 125 4e-27
BT076848_1(BT076848|pid:none) Caligus rogercresseyi clone crog-e... 120 2e-25
AE017350_99(AE017350|pid:none) Cryptococcus neoformans var. neof... 117 8e-25
CP001323_345(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 111 6e-23
AK303598_1(AK303598|pid:none) Homo sapiens cDNA FLJ58869 complet... 103 2e-20
FN313847_1(FN313847|pid:none) Schistosoma japonicum isolate Anhu... 99 3e-19
FN357417_13(FN357417|pid:none) Schistosoma mansoni genome sequen... 95 8e-18
FB832948_1(FB832948|pid:none) Sequence 52221 from Patent WO20080... 89 5e-16
EU970616_1(EU970616|pid:none) Zea mays clone 348006 unknown mRNA. 88 9e-16
AK340783_1(AK340783|pid:none) Acyrthosiphon pisum ACYPI006951 mR... 68 8e-10
AE017332_555(AE017332|pid:none) Mycoplasma hyopneumoniae 232, co... 40 0.29
AE017244_559(AE017244|pid:none) Mycoplasma hyopneumoniae 7448, c... 38 0.84
CP000436_1591(CP000436|pid:none) Haemophilus somnus 129PT, compl... 37 1.9
(Q9J569) RecName: Full=Putative ankyrin repeat protein FPV162; ... 36 3.2
CP000947_415(CP000947|pid:none) Haemophilus somnus 2336, complet... 36 3.2
FJ711439_2(FJ711439|pid:none) Acinetobacter sp. NFM2 clone fosmi... 35 5.5

>FB336643_1(FB336643|pid:none) Sequence 4169 from Patent WO2007110314.
&FB832966_1(FB832966|pid:none)
&FB844862_1(FB844862|pid:none)
Length = 535

Score = 164 bits (415), Expect = 8e-39
Identities = 97/249 (38%), Positives = 138/249 (55%), Gaps = 6/249 (2%)
Frame = +1

Query: 322 ETQERINELLKLF-PPIKYGFAYGSGVISQKGYNRNGDG---STSTENPSKKEEQSPMID 489
E +E + ++L F PI+Y FAYGSGV Q G D S + ++ + MID
Sbjct: 143 EFKEALRQILWQFRAPIRYAFAYGSGVFPQNGSAPGSDQCHPSAPAAIQNMQQGKGKMID 202

Query: 490 LIFAVENSTKWHSLNLVNNQSHYSFLGLMGAHIVAKVQ-YMNAKIYFNTLLEHNGIKFKY 666
IF V S WH LNL ++ HYS LG +G++ V++VQ A +YFN + NG KY
Sbjct: 203 FIFGVSYSQHWHDLNLAQHRDHYSGLGSLGSYTVSQVQDRFGAGVYFNPYITVNGTLIKY 262

Query: 667 GVIEYKDLIDDLKNWKTLYLSGRMQKPFSXXXX*NAKTHFSIYQHPSTEGLKEIQEVNSE 846
GV+ L +DL W TLYL+GR+QKP + HP + ++
Sbjct: 263 GVVNIDTLCNDLSRWDTLYLAGRLQKPVKI-----------LRDHPKV-------RLANQ 304

Query: 847 YNLKNAVITSLLMLPETFTEYDLYHTISKLSYSGDIRMK-GAENPMKTHNIVINNIDGFR 1023
NL +AV +LL+LPE FTE+ LY+TI+ +SY GD+RM E+P K +NIV + + FR
Sbjct: 305 MNLLSAVRVALLLLPEEFTEFQLYNTIASMSYMGDLRMALPVEDPRKVNNIVSSQMANFR 364

Query: 1024 SLHFPIIND 1050
L+ P+I +
Sbjct: 365 RLYAPLIEN 373

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,860,130,619
Number of extensions: 33163031
Number of successful extensions: 80249
Number of sequences better than 10.0: 40
Number of HSP's gapped: 80139
Number of HSP's successfully gapped: 41
Length of query: 498
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 365
Effective length of database: 620,718,517
Effective search space: 226562258705
Effective search space used: 226562258705
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.58 gvh: 0.41 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.31 mip: 0.00
nuc: 0.03 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
28.0 %: mitochondrial
16.0 %: nuclear
8.0 %: cytoskeletal
8.0 %: vesicles of secretory system

>> prediction for Contig-U15838-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0