Contig-U15773-1
Contig ID Contig-U15773-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15773-1 (Contig-U15773-1Q) /CSM_Contig/Contig-U15773-1Q.Seq.d
GGCCTACTGGTTCAATAATAATAATAATGATAATGTTGAAAATTATAAAC
AACCTGATATTCATTGTAATCCATATATTAGAATTAAAACCTGTTTANAA
GTTGCAACCATTTTANTTATTATATCAGANTTAAAAGAACCACCTTATAG
AATATTAAATAATACAAAGTATCAACTTTCAATTCAACAGAAAAAAGTTG
GTAAAGTTTTAACGGTTGAACCATCTTCATCAATTCCTTATGTTTGGGAT
TTACCATTGGAAGATCATATTTTAGAGGTATTAGTACATATATCAACCAA
TCAAAGTGAAAAGGCATCTTATAAGATGGATAAAATTAAAACTTTTAGAC
CAATGGAATTTAATGATGATCATAATCCTGTGGTTATTAAAGCGATTGTT
GAAGCTGATGAATCAACTCGTGTATTAACACTCTCTGATAAGACATCATT
TCAAATTAGTAAATATGAAGAAGAGAATTTACGTCAATCATTTAGAATTC
ATTTCACTGGTATCGGTATATCAGTTATTAATGCAAATCCAACAGAACTT
CTTTACGTTTCAATTCATGATATCCTTTGTGAATATTTCATTAGTAGTTT
TCTTCAAAAGTTAGAGATGAAAATTACAAATATTCAAGTTGATAATCAAT
TATCAAAAGTTACACCCTATAGTCACCCAGTTTTATTATTTGCAGATAAT
CTATTACCAAATACACCATTCTTACAAGTTAGAATAGTAAAATCAATGAA
AATGAAAAATATTGATTACTATCATCATGTCTCTTTGAAAATGCAAGAAT
TAAACATTAAAGTTGAAGAGAAATTCCTTTACGTATTATTGGATTTCTTT
AATAGTTTAGATTTCTCATTTTGGACAGGTAATAAAAAGACAAATACTCT
ACATAATATGGATATGTTAACTCCAATGTATAATGAAGATATTGGTGAAG
GATTTATAGATGAAATGGTAGCTCGTGCTCTACCTTCAATCTATGGTAAG
AAAATGTATTTCGAATCATTGGATATTGAACCAATTAGTATGTTTTTAAC
ATTTGATCTTTCAAATAAGTCTGGTTCAATCGCAAGTTTAGAACAAGCTC
CAATGGTAAAAGCATTTAGAAGAATAGGTTTCGTTATTGTTAGTTTTCAA
CATGCTCATATATTTTTACATGGTTTCTCATTATCTCATGCATTTGGTTC
GAATGAAGAATTGCTTGCACCAATTTTCAATCATTACTTTAGTGAAGGTT
TATCTGAAGTTTATAAAATATTGGGAGCATTTAATTTGTTTGGTAATCCA
GTTGGTTTGGTTACAAACTTTGGAATTGGTTTTAAAGAATTTTTCGTTAG
TATGGGTAAAGGTTTGGTAGGAAATAGTTTTACTGATTCATTTGGTCAAG
GTTCAAAAAGTTTAGCAAAACATTCAGTCTATGGTATATTTGATTCGGGT
GCAAAACTAACAGGTTCTGCTGGTAAAGTATTATCAACACTTTCAATGGA
TCAACGTTATATTCTAGAGAGACAATATATCATTGGTGAATCACCAAATA
CATTTATGCAAGGTTTAATATTGGGTGGTAGAGCTGCAAAAACTGCTGTT
TATCGTGGTTTCTCCGGTTTCGTAAAATTACCTTATGAAGGTGGTAAAGA
AGCAGGACCAAAAGGTGTTGTCAAAGGTATTGGTAAAGGAACTGCTGGTC
TTGTGCTAAAACCAATTGCAGCTGGCTTTGATTTTGCTTCAAAAGTTTCA
GAGGGTATTAAAAATTCAACTCAATTAAGTATAGAAAGAAAGA-------
---CATTTTATATTTCAAAAGCAATTCATACTCCATCTGCTAGCTCTTTA
AAGAAATTAAAAACCCCTCATCATTACAATGTAAGATTTGAACCATCAAG
TAGTTTAGGCCCTCAAGATTTTGATATTCATACAATTCGTTTACAAAATC
AACAATATCAACACAGTGGAAGTGGAGCACCCCCACCCCCACCAATAATA
ACCACAACAACTAATTCAACCATTCCACCACCATCTTCTAATATAAATCA
ACGTCAATTACAACATCAATTCTCTAGTAATTCGATAATAGAAACACCAA
GATATAAAAGCATGGCTAGACAACAACAATTTCAACAACCACCACCTTCA
CCTCCATTACCATCCAATAACAGATTATCATTTACACCAAGTGGTAGTGG
CAATATAAATTATAGTGATAAATTTGAAGTGGCATTGAACACATTATTCA
AATTCAAAAAATTCAATCTCAACAAATGTCATCACTTCAAAAGAATCAAA
GAGCATTTTATATTTCAAAAGCAATTCATACTCCATCTGCTAGCTCTTTA
AAGAAATTAAAAACCCCTCATCATTACAATGTAAGATTTGAACCATCAAG
TAGTTTAGGCCCTCAAGATTTTGATATTCATACAATTCGTTTACAAAATC
AACAATATCAACACAGTGGAAGTGGAGCACCCCCCACCCCCACCAATAAT
AACCACAACAACTAATTCAACCATTCCACCACCATCTTCTAATATAAATC
AACGTCAATTACAACATCAATTCTCTAGTAATTCGATAATAGAAACACCA
AGATATAAAAGCATGGCTAGACAACAACAATTTCAACAACCACCACCTCC
ACCTCCATTACCATCCAATAACAGATTATCATTAACACCAAGTGGTAGTG
GCAATATAAATTATAGTGATAAATTTGAAGTGGCATTGAACACAATTATT
CAAATTCAAAAAATTCAATCTCAACAAATGTCATCACTTCAAAAGAATCA
AAGAGATTTACAAAAATTATTATTTCAACAACAATCAACCGAATTTGATA
CATTAAGAAATCAACAAGAACAAATTCAAAACATAATATCACAATATCAT
CCATTAAGCCCTTCAAAAGCTTCTTTAGTTTCAAAACTATCCAATGAACT
TGAGTCAACAAATAGTAATGTTGTAATTTCACCTCCAACAGGTGGTGCTT
CAAATTAAAAATATAAATAAATAATTAAACAATTAAACAATTAAACAATT
AAATTAACAAAAAAAAAAACAAA

Gap gap included
Contig length 3063
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 2315092
End point 2318172
Strand (PLUS/MINUS) PLUS
Number of clones 10
Number of EST 20
Link to clone list U15773
List of clone(s)

est1=AHH660F,1,489
est2=CHE782F,204,836
est3=CHQ416F,527,1012
est4=VHC652F,552,1122
est5=VHC704F,552,1117
est6=CHP436F,1045,1654
est7=CHJ228F,1166,1793
est8=SHF595F,1248,1793
est9=SFK584H,1794,2793
est10=CHE782Z,2223,2879
est11=AHH660Z,2286,3003
est12=VHC652Z,2291,3043
est13=VHC704Z,2329,2974
est14=CHQ416Z,2342,3038
est15=CHP436Z,2474,3060
est16=SHF595Z,2504,3121
est17=AHQ581F,2647,3042
est18=AHQ581Z,2647,3031
est19=CHJ228Z,2648,2819
est20=SFK584Z,2781,2951
Translated Amino Acid sequence
AYWFNNNNNDNVENYKQPDIHCNPYIRIKTCLXVATILXIISXLKEPPYRILNNTKYQLS
IQQKKVGKVLTVEPSSSIPYVWDLPLEDHILEVLVHISTNQSEKASYKMDKIKTFRPMEF
NDDHNPVVIKAIVEADESTRVLTLSDKTSFQISKYEEENLRQSFRIHFTGIGISVINANP
TELLYVSIHDILCEYFISSFLQKLEMKITNIQVDNQLSKVTPYSHPVLLFADNLLPNTPF
LQVRIVKSMKMKNIDYYHHVSLKMQELNIKVEEKFLYVLLDFFNSLDFSFWTGNKKTNTL
HNMDMLTPMYNEDIGEGFIDEMVARALPSIYGKKMYFESLDIEPISMFLTFDLSNKSGSI
ASLEQAPMVKAFRRIGFVIVSFQHAHIFLHGFSLSHAFGSNEELLAPIFNHYFSEGLSEV
YKILGAFNLFGNPVGLVTNFGIGFKEFFVSMGKGLVGNSFTDSFGQGSKSLAKHSVYGIF
DSGAKLTGSAGKVLSTLSMDQRYILERQYIIGESPNTFMQGLILGGRAAKTAVYRGFSGF
VKLPYEGGKEAGPKGVVKGIGKGTAGLVLKPIAAGFDFASKVSEGIKNSTQLSIERK---

---FYISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSG
APPPPPIITTTTNSTIPPPSSNINQRQLQHQFSSNSIIETPRYKSMARQQQFQQPPPSPP
LPSNNRLSFTPSGSGNINYSDKFEVALNTLFKFKKFNLNKCHHFKRIKEHFIFQKQFILH
LLAL*rn*kpliitm*dlnhqvv*alkilifiqfvykinnintvevehpppppiittttn
stipppssninqrqlqhqfssnsiietpryksmarqqqfqqpppppplpsnnrlsltpsg
sgninysdkfevalntiiqiqkiqsqqmsslqknqrdlqkllfqqqstefdtlrnqqeqi
qniisqyhplspskaslvsklsnelestnsnvvispptggasn*kyk*iikqlnn*tikl
tkkkt


Translated Amino Acid sequence (All Frames)
Frame A:
gllvq******c*kl*tt*ysl*siy*n*nlfxscnhfxyyirxkrttl*nik*ykvstf
nsteksw*sfng*tifinslclgftigrsyfrgistyinqsk*kgil*dg*n*nf*tngi
***s*scgy*sdc*s**inscintl**diisn**i*rreftsii*nsfhwyryisy*cks
nrtslrfns*ypl*ifh**fsskvrdenykyss**siiksytl*spsfiicr*sitkyti
lts*nskineneky*llssclfenarikh*s*reiplriigfl**frflildr**kdkys
t*ygyvnsnv**ryw*riyr*ngsscstfnlw*envfriigy*tn*yvfni*sfk*vwfn
rkfrtssngksi*knrfryc*fstcsyiftwfliisciwfe*riactnfqsll**rfi*s
l*nigsi*fvw*sswfgyklwnwf*rifr*yg*rfgrk*fy*fiwsrfkkfsktfslwyi
*fgcktnrfcw*siintfngstlysretiyhw*itkyiyarfnigw*sckncclswflrf
rkitl*rw*rsrtkrccqryw*rncwscaktncswl*fcfksfrgy*kfnsikyrkk---

---hfifqkqfilhllal*rn*kpliitm*dlnhqvv*alkilifiqfvykinnintvev
ehphphq**pqqliqpfhhhlli*invnyninslvir**khqdikawldnnnfnnhhlhl
hyhpitdyhlhqvvvai*iivinlkwh*thysnsknsistnvitskesksilyfksnsys
ic*lfkeiknpsslqcki*tik*frpsrf*ysynsftkstistqwkwstphphq**pqql
iqpfhhhlli*invnyninslvir**khqdikawldnnnfnnhhlhlhyhpitdyh*hqv
vvai*iivinlkwh*tqlfkfkkfnlnkchhfkrikeiyknyyfnnnqpnlih*einknk
fkt*yhniih*alqkll*fqnypmnlsqqivml*fhlqqvvlqiknink*lnn*tikqln
*qkkkq

Frame B:
AYWFNNNNNDNVENYKQPDIHCNPYIRIKTCLXVATILXIISXLKEPPYRILNNTKYQLS
IQQKKVGKVLTVEPSSSIPYVWDLPLEDHILEVLVHISTNQSEKASYKMDKIKTFRPMEF
NDDHNPVVIKAIVEADESTRVLTLSDKTSFQISKYEEENLRQSFRIHFTGIGISVINANP
TELLYVSIHDILCEYFISSFLQKLEMKITNIQVDNQLSKVTPYSHPVLLFADNLLPNTPF
LQVRIVKSMKMKNIDYYHHVSLKMQELNIKVEEKFLYVLLDFFNSLDFSFWTGNKKTNTL
HNMDMLTPMYNEDIGEGFIDEMVARALPSIYGKKMYFESLDIEPISMFLTFDLSNKSGSI
ASLEQAPMVKAFRRIGFVIVSFQHAHIFLHGFSLSHAFGSNEELLAPIFNHYFSEGLSEV
YKILGAFNLFGNPVGLVTNFGIGFKEFFVSMGKGLVGNSFTDSFGQGSKSLAKHSVYGIF
DSGAKLTGSAGKVLSTLSMDQRYILERQYIIGESPNTFMQGLILGGRAAKTAVYRGFSGF
VKLPYEGGKEAGPKGVVKGIGKGTAGLVLKPIAAGFDFASKVSEGIKNSTQLSIERK---

---ilyfksnsysic*lfkeiknpsslqcki*tik*frpsrf*ysynsftkstistqwkw
stptptnnnhnn*fnhsttif*ykstsittsil**fdnrntki*khg*tttisttttfts
itiq*qiiiytkw*wqykl***i*sgiehiiqiqkiqsqqmsslqknqrafyiskaihtp
sasslkklktphhynvrfepssslgpqdfdihtirlqnqqyqhsgsgapptptnnnhnn*
fnhsttif*ykstsittsil**fdnrntki*khg*tttisttttstsitiq*qiiintkw
*wqykl***i*sgiehnysnsknsistnvitskeskrftkiiisttinri*yikkstrtn
skhnitissikpfksffsfktiq*t*vnk**ccnftsnrwcfklki*inn*tikqlnn*i
nkkknk

Frame C:
ptgsiiiimimlkiinnlifivihilelkpvxklqpfxllyqx*knhliey*iiqsinfq
fnrkklvkf*rlnhlhqflmfgiyhwkiif*ry*yiyqpikvkrhlirwiklklldqwnl
mmiiilwllkrllklmnqlvy*hslirhhfklvnmkkriyvnhlefislvsvyqllmqiq
qnfftfqfmisfvnislvvffks*r*klqifkliinyqklhpivtqfyylqiiyyqihhs
ykle**nq*k*kilitiimsl*kckn*tlklkrnsftyywisliv*ishfgqvikrqily
iiwic*lqcimkilvkdl*mkw*lvlylqsmvrkcisnhwilnqlvcf*hlifqislvqs
qv*nklqw*khlee*vslllvfnmliyfymvshylmhlvrmknclhqfsiitlvkvylkf
ikywehliclviqlvwlqtlelvlknfslvwvkvw*eivllihlvkvqkv*qniqsmvyl
irvqn*qvllvkyyqhfqwinvif*rdnislvnhqihlckv*ywvvelqkllfivvspvs
*nylmkvvkkqdqkvlskvlvkellvlc*nqlqlalillqkfqrvlkiqln*v*ker---

---FYISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSG
APPPPPIITTTTNSTIPPPSSNINQRQLQHQFSSNSIIETPRYKSMARQQQFQQPPPSPP
LPSNNRLSFTPSGSGNINYSDKFEVALNTLFKFKKFNLNKCHHFKRIKEHFIFQKQFILH
LLAL*rn*kpliitm*dlnhqvv*alkilifiqfvykinnintvevehpppppiittttn
stipppssninqrqlqhqfssnsiietpryksmarqqqfqqpppppplpsnnrlsltpsg
sgninysdkfevalntiiqiqkiqsqqmsslqknqrdlqkllfqqqstefdtlrnqqeqi
qniisqyhplspskaslvsklsnelestnsnvvispptggasn*kyk*iikqlnn*tikl
tkkkt

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15773-1 (Contig-U15773-1Q)
/CSM_Contig/Contig-U15773-1Q.Seq.d
(3073 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15773-1 (Contig-U15773-1Q) /CSM_Contig/Conti... 5802 0.0
Contig-U12590-1 (Contig-U12590-1Q) /CSM_Contig/Conti... 48 8e-05
Contig-U11005-1 (Contig-U11005-1Q) /CSM_Contig/Conti... 48 8e-05
Contig-U15941-1 (Contig-U15941-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U14863-1 (Contig-U14863-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U02898-1 (Contig-U02898-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U16044-1 (Contig-U16044-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U15705-1 (Contig-U15705-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U12923-1 (Contig-U12923-1Q) /CSM_Contig/Conti... 44 0.001

>Contig-U15773-1 (Contig-U15773-1Q) /CSM_Contig/Contig-U15773-1Q.Seq.d
Length = 3073

Score = 5802 bits (2927), Expect = 0.0
Identities = 2990/3002 (99%)
Strand = Plus / Plus


Query: 1 ggcctactggttcaataataataataatgataatgttgaaaattataaacaacctgatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcctactggttcaataataataataatgataatgttgaaaattataaacaacctgatat 60


Query: 61 tcattgtaatccatatattagaattaaaacctgtttanaagttgcaaccattttanttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcattgtaatccatatattagaattaaaacctgtttanaagttgcaaccattttanttat 120


Query: 121 tatatcaganttaaaagaaccaccttatagaatattaaataatacaaagtatcaactttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatatcaganttaaaagaaccaccttatagaatattaaataatacaaagtatcaactttc 180


Query: 181 aattcaacagaaaaaagttggtaaagttttaacggttgaaccatcttcatcaattcctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattcaacagaaaaaagttggtaaagttttaacggttgaaccatcttcatcaattcctta 240


Query: 241 tgtttgggatttaccattggaagatcatattttagaggtattagtacatatatcaaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtttgggatttaccattggaagatcatattttagaggtattagtacatatatcaaccaa 300


Query: 301 tcaaagtgaaaaggcatcttataagatggataaaattaaaacttttagaccaatggaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaaagtgaaaaggcatcttataagatggataaaattaaaacttttagaccaatggaatt 360


Query: 361 taatgatgatcataatcctgtggttattaaagcgattgttgaagctgatgaatcaactcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taatgatgatcataatcctgtggttattaaagcgattgttgaagctgatgaatcaactcg 420


Query: 421 tgtattaacactctctgataagacatcatttcaaattagtaaatatgaagaagagaattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtattaacactctctgataagacatcatttcaaattagtaaatatgaagaagagaattt 480


Query: 481 acgtcaatcatttagaattcatttcactggtatcggtatatcagttattaatgcaaatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgtcaatcatttagaattcatttcactggtatcggtatatcagttattaatgcaaatcc 540


Query: 541 aacagaacttctttacgtttcaattcatgatatcctttgtgaatatttcattagtagttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacagaacttctttacgtttcaattcatgatatcctttgtgaatatttcattagtagttt 600


Query: 601 tcttcaaaagttagagatgaaaattacaaatattcaagttgataatcaattatcaaaagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcttcaaaagttagagatgaaaattacaaatattcaagttgataatcaattatcaaaagt 660


Query: 661 tacaccctatagtcacccagttttattatttgcagataatctattaccaaatacaccatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tacaccctatagtcacccagttttattatttgcagataatctattaccaaatacaccatt 720


Query: 721 cttacaagttagaatagtaaaatcaatgaaaatgaaaaatattgattactatcatcatgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttacaagttagaatagtaaaatcaatgaaaatgaaaaatattgattactatcatcatgt 780


Query: 781 ctctttgaaaatgcaagaattaaacattaaagttgaagagaaattcctttacgtattatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctctttgaaaatgcaagaattaaacattaaagttgaagagaaattcctttacgtattatt 840


Query: 841 ggatttctttaatagtttagatttctcattttggacaggtaataaaaagacaaatactct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggatttctttaatagtttagatttctcattttggacaggtaataaaaagacaaatactct 900


Query: 901 acataatatggatatgttaactccaatgtataatgaagatattggtgaaggatttataga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 acataatatggatatgttaactccaatgtataatgaagatattggtgaaggatttataga 960


Query: 961 tgaaatggtagctcgtgctctaccttcaatctatggtaagaaaatgtatttcgaatcatt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tgaaatggtagctcgtgctctaccttcaatctatggtaagaaaatgtatttcgaatcatt 1020


Query: 1021 ggatattgaaccaattagtatgtttttaacatttgatctttcaaataagtctggttcaat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ggatattgaaccaattagtatgtttttaacatttgatctttcaaataagtctggttcaat 1080


Query: 1081 cgcaagtttagaacaagctccaatggtaaaagcatttagaagaataggtttcgttattgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgcaagtttagaacaagctccaatggtaaaagcatttagaagaataggtttcgttattgt 1140


Query: 1141 tagttttcaacatgctcatatatttttacatggtttctcattatctcatgcatttggttc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tagttttcaacatgctcatatatttttacatggtttctcattatctcatgcatttggttc 1200


Query: 1201 gaatgaagaattgcttgcaccaattttcaatcattactttagtgaaggtttatctgaagt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gaatgaagaattgcttgcaccaattttcaatcattactttagtgaaggtttatctgaagt 1260


Query: 1261 ttataaaatattgggagcatttaatttgtttggtaatccagttggtttggttacaaactt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttataaaatattgggagcatttaatttgtttggtaatccagttggtttggttacaaactt 1320


Query: 1321 tggaattggttttaaagaatttttcgttagtatgggtaaaggtttggtaggaaatagttt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tggaattggttttaaagaatttttcgttagtatgggtaaaggtttggtaggaaatagttt 1380


Query: 1381 tactgattcatttggtcaaggttcaaaaagtttagcaaaacattcagtctatggtatatt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tactgattcatttggtcaaggttcaaaaagtttagcaaaacattcagtctatggtatatt 1440


Query: 1441 tgattcgggtgcaaaactaacaggttctgctggtaaagtattatcaacactttcaatgga 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tgattcgggtgcaaaactaacaggttctgctggtaaagtattatcaacactttcaatgga 1500


Query: 1501 tcaacgttatattctagagagacaatatatcattggtgaatcaccaaatacatttatgca 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 tcaacgttatattctagagagacaatatatcattggtgaatcaccaaatacatttatgca 1560


Query: 1561 aggtttaatattgggtggtagagctgcaaaaactgctgtttatcgtggtttctccggttt 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 aggtttaatattgggtggtagagctgcaaaaactgctgtttatcgtggtttctccggttt 1620


Query: 1621 cgtaaaattaccttatgaaggtggtaaagaagcaggaccaaaaggtgttgtcaaaggtat 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 cgtaaaattaccttatgaaggtggtaaagaagcaggaccaaaaggtgttgtcaaaggtat 1680


Query: 1681 tggtaaaggaactgctggtcttgtgctaaaaccaattgcagctggctttgattttgcttc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tggtaaaggaactgctggtcttgtgctaaaaccaattgcagctggctttgattttgcttc 1740


Query: 1741 aaaagtttcagagggtattaaaaattcaactcaattaagtatagaaagaaagannnnnnn 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 aaaagtttcagagggtattaaaaattcaactcaattaagtatagaaagaaagannnnnnn 1800


Query: 1801 nnncattttatatttcaaaagcaattcatactccatctgctagctctttaaagaaattaa 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 nnncattttatatttcaaaagcaattcatactccatctgctagctctttaaagaaattaa 1860


Query: 1861 aaacccctcatcattacaatgtaagatttgaaccatcaagtagtttaggccctcaagatt 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 aaacccctcatcattacaatgtaagatttgaaccatcaagtagtttaggccctcaagatt 1920


Query: 1921 ttgatattcatacaattcgtttacaaaatcaacaatatcaacacagtggaagtggagcac 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 ttgatattcatacaattcgtttacaaaatcaacaatatcaacacagtggaagtggagcac 1980


Query: 1981 ccccacccccaccaataataaccacaacaactaattcaaccattccaccaccatcttcta 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ccccacccccaccaataataaccacaacaactaattcaaccattccaccaccatcttcta 2040


Query: 2041 atataaatcaacgtcaattacaacatcaattctctagtaattcgataatagaaacaccaa 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 atataaatcaacgtcaattacaacatcaattctctagtaattcgataatagaaacaccaa 2100


Query: 2101 gatataaaagcatggctagacaacaacaatttcaacaaccaccaccttcacctccattac 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gatataaaagcatggctagacaacaacaatttcaacaaccaccaccttcacctccattac 2160


Query: 2161 catccaataacagattatcatttacaccaagtggtagtggcaatataaattatagtgata 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 catccaataacagattatcatttacaccaagtggtagtggcaatataaattatagtgata 2220


Query: 2221 aatttgaagtggcattgaacacattattcaaattcaaaaaattcaatctcaacaaatgtc 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 aatttgaagtggcattgaacacattattcaaattcaaaaaattcaatctcaacaaatgtc 2280


Query: 2281 atcacttcaaaagaatcaaagagcattttatatttcaaaagcaattcatactccatctgc 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 atcacttcaaaagaatcaaagagcattttatatttcaaaagcaattcatactccatctgc 2340


Query: 2341 tagctctttaaagaaattaaaaacccctcatcattacaatgtaagatttgaaccatcaag 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 tagctctttaaagaaattaaaaacccctcatcattacaatgtaagatttgaaccatcaag 2400


Query: 2401 tagtttaggccctcaagattttgatattcatacaattcgtttacaaaatcaacaatatca 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 tagtttaggccctcaagattttgatattcatacaattcgtttacaaaatcaacaatatca 2460


Query: 2461 acacagtggaagtggagcannnnnnnnnnnnaccaataataaccacaacaactaattcaa 2520
||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2461 acacagtggaagtggagcaccccccacccccaccaataataaccacaacaactaattcaa 2520


Query: 2521 ccattccaccaccatcttctaatataaatcaacgtcaattacaacatcaattctctagta 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 ccattccaccaccatcttctaatataaatcaacgtcaattacaacatcaattctctagta 2580


Query: 2581 attcgataatagaaacaccaagatataaaagcatggctagacaacaacaatttcaacaac 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 attcgataatagaaacaccaagatataaaagcatggctagacaacaacaatttcaacaac 2640


Query: 2641 caccacctccacctccattaccatccaataacagattatcattaacaccaagtggtagtg 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 caccacctccacctccattaccatccaataacagattatcattaacaccaagtggtagtg 2700


Query: 2701 gcaatataaattatagtgataaatttgaagtggcattgaacacaattattcaaattcaaa 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gcaatataaattatagtgataaatttgaagtggcattgaacacaattattcaaattcaaa 2760


Query: 2761 aaattcaatctcaacaaatgtcatcacttcaaaagaatcaaagagatttacaaaaattat 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 aaattcaatctcaacaaatgtcatcacttcaaaagaatcaaagagatttacaaaaattat 2820


Query: 2821 tatttcaacaacaatcaaccgaatttgatacattaagaaatcaacaagaacaaattcaaa 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 tatttcaacaacaatcaaccgaatttgatacattaagaaatcaacaagaacaaattcaaa 2880


Query: 2881 acataatatcacaatatcatccattaagcccttcaaaagcttctttagtttcaaaactat 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 acataatatcacaatatcatccattaagcccttcaaaagcttctttagtttcaaaactat 2940


Query: 2941 ccaatgaacttgagtcaacaaatagtaatgttgtaatttcacctccaacaggtggtgctt 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 ccaatgaacttgagtcaacaaatagtaatgttgtaatttcacctccaacaggtggtgctt 3000


Query: 3001 ca 3002
||
Sbjct: 3001 ca 3002


>Contig-U12590-1 (Contig-U12590-1Q) /CSM_Contig/Contig-U12590-1Q.Seq.d
Length = 1074

Score = 48.1 bits (24), Expect = 8e-05
Identities = 33/36 (91%)
Strand = Plus / Plus


Query: 14 aataataataataatgataatgttgaaaattataaa 49
||||||||||||||| ||||| ||||||||| ||||
Sbjct: 269 aataataataataataataattttgaaaattgtaaa 304


Score = 34.2 bits (17), Expect = 1.2
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 14 aataataataataatgataat 34
||||||||||||||| |||||
Sbjct: 266 aataataataataataataat 286


>Contig-U11005-1 (Contig-U11005-1Q) /CSM_Contig/Contig-U11005-1Q.Seq.d
Length = 1235

Score = 48.1 bits (24), Expect = 8e-05
Identities = 33/36 (91%)
Strand = Plus / Plus


Query: 14 aataataataataatgataatgttgaaaattataaa 49
||||||||||||||| ||||| |||||||| |||||
Sbjct: 70 aataataataataataataatattgaaaataataaa 105


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 91,921
Number of Sequences: 8402
Number of extensions: 91921
Number of successful extensions: 23100
Number of sequences better than 10.0: 1573
length of query: 3073
length of database: 8,075,542
effective HSP length: 17
effective length of query: 3056
effective length of database: 7,932,708
effective search space: 24242355648
effective search space used: 24242355648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2.15
Homology vs DNA
Query= Contig-U15773-1 (Contig-U15773-1Q) /CSM_Contig/Contig-U15773-1Q.Seq.d
(3073 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ364456) Dictyostelium discoideum cDNA clone:ddc31d21, 5' ... 1255 0.0 1
(BJ366807) Dictyostelium discoideum cDNA clone:ddc40g08, 5' ... 1245 0.0 1
(BJ369875) Dictyostelium discoideum cDNA clone:ddc52h10, 5' ... 1178 0.0 1
(BJ419589) Dictyostelium discoideum cDNA clone:ddv36g14, 5' ... 1108 0.0 1
(BJ419430) Dictyostelium discoideum cDNA clone:ddv36h01, 5' ... 1098 0.0 1
(BJ394631) Dictyostelium discoideum cDNA clone:dds35m23, 5' ... 1076 0.0 1
(BJ438013) Dictyostelium discoideum cDNA clone:ddv36h01, 3' ... 777 0.0 2
(BJ438166) Dictyostelium discoideum cDNA clone:ddv36g14, 3' ... 507 0.0 3
(BJ352387) Dictyostelium discoideum cDNA clone:dda46g16, 3' ... 507 0.0 4
(BJ385216) Dictyostelium discoideum cDNA clone:ddc54p04, 3' ... 482 0.0 3
(BJ370463) Dictyostelium discoideum cDNA clone:ddc54p04, 5' ... 948 0.0 1
(BJ334480) Dictyostelium discoideum cDNA clone:dda46g16, 5' ... 946 0.0 1
(BJ378388) Dictyostelium discoideum cDNA clone:ddc31d21, 3' ... 827 0.0 2
(BJ383243) Dictyostelium discoideum cDNA clone:ddc52h10, 3' ... 416 0.0 2
(BJ406630) Dictyostelium discoideum cDNA clone:dds35m23, 3' ... 379 0.0 2
(BJ357796) Dictyostelium discoideum cDNA clone:dda64a21, 3' ... 392 e-141 2
(BJ339268) Dictyostelium discoideum cDNA clone:dda64a21, 5' ... 392 e-141 2
(BJ381090) Dictyostelium discoideum cDNA clone:ddc40g08, 3' ... 163 1e-43 2
(BJ401306) Dictyostelium discoideum cDNA clone:dds22g21, 3' ... 143 5e-29 1
(AF079445) Dictyostelium discoideum TipC (tipC) gene, comple... 40 2e-08 8
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 44 5e-05 5
(AB082544) Dictyostelium discoideum forC gene for formin hom... 38 1e-04 5
(AJ585374) Dictyostelium discoideum phg2 mRNA for Phagocytos... 42 2e-04 5
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 56 2e-04 2
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 46 2e-04 9
(BW244661) Ciona intestinalis cDNA, clone:citb065f01, 5' end... 32 3e-04 5
(EC821817) SME00004350 esmbsro2 Sawyeria marylandensis cDNA,... 44 3e-04 2
(EC823489) SME00005735 esmbsro2 Sawyeria marylandensis cDNA,... 44 4e-04 2
(BW267754) Ciona intestinalis cDNA, clone:cign048i12, 5' end... 32 4e-04 5
(AC115578) Dictyostelium discoideum chromosome 2 map complem... 42 6e-04 6
(FK056897) XABT121974.b1 Gateway compatible cien cDNA librar... 42 0.002 3
(BW224138) Ciona intestinalis cDNA, clone:cilv056l08, 5' end... 42 0.002 3
(BW160388) Ciona intestinalis cDNA, clone:rcigd003j08, 3' en... 42 0.002 3
(BW289868) Ciona intestinalis cDNA, clone:cigd003j08, 5' end... 42 0.002 3
(BW089348) Ciona intestinalis cDNA, clone:rcilv056l08, 3' en... 42 0.002 3
(BW084909) Ciona intestinalis cDNA, clone:rcieg097f07, 3' en... 42 0.002 3
(BW048374) Ciona intestinalis cDNA, clone:cibd064g11, 5' end... 42 0.002 3
(BW143187) Ciona intestinalis cDNA, clone:rcign064c18, 3' en... 42 0.002 3
(AV878364) Ciona intestinalis cDNA, clone:rcitb35k02, 3' end... 42 0.002 3
(BW097389) Ciona intestinalis cDNA, clone:rcitb058m15, 3' en... 42 0.002 3
(BW142884) Ciona intestinalis cDNA, clone:rcign063c18, 3' en... 42 0.002 3
(BW272568) Ciona intestinalis cDNA, clone:cign063c18, 5' end... 42 0.002 3
(BW261918) Ciona intestinalis cDNA, clone:cign002b03, 5' end... 42 0.002 3
(BW132112) Ciona intestinalis cDNA, clone:rcign002b03, 3' en... 42 0.002 3
(BW201326) Ciona intestinalis cDNA, clone:cicl077k05, 5' end... 42 0.002 3
(BW015697) Ciona intestinalis cDNA, clone:rcibd053n20, 3' en... 42 0.002 3
(FF713412) XABT33097.fwd Gateway compatible cien cDNA librar... 42 0.002 3
(FF800498) XABT93069.fwd Gateway compatible cien cDNA librar... 42 0.002 3
(AC116919) Dictyostelium discoideum chromosome 2 map complem... 38 0.003 7
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 36 0.004 21
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 44 0.005 3
(FF738679) XABT51178.rev Gateway compatible cien cDNA librar... 44 0.006 2
(FF689741) XABT102786.fwd Gateway compatible cien cDNA libra... 44 0.006 2
(FF794798) XABT89289.fwd Gateway compatible cien cDNA librar... 44 0.006 2
(FK225316) XABT227347.b1 Gateway compatible cien cDNA librar... 44 0.006 2
(FF738680) XABT51178.fwd Gateway compatible cien cDNA librar... 44 0.007 2
(U23478) Dictyostelium discoideum phosphatidylinositol-4,5-d... 56 0.008 1
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 56 0.008 1
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 56 0.008 1
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 56 0.008 1
(BJ346232) Dictyostelium discoideum cDNA clone:dda30e12, 3' ... 38 0.008 3
(AF045453) Dictyostelium discoideum protein kinase YakA (yak... 36 0.009 5
(BP018698) Ciona intestinalis cDNA, clone:cieg39b16, 5' end,... 32 0.010 4
(DY892895) CeleSEQ12022 Cunninghamella elegans pBluescript (... 36 0.011 4
(CU861494) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.012 9
(AK222385) Ciona intestinalis cDNA, clone:cigd022c16, full i... 32 0.013 5
(AK112540) Ciona intestinalis cDNA, clone:cicl046a04, full i... 32 0.014 5
(FF806071) XABT96761.fwd Gateway compatible cien cDNA librar... 40 0.021 2
(BJ373941) Dictyostelium discoideum cDNA clone:ddc5b17, 3' e... 38 0.022 3
(BJ383712) Dictyostelium discoideum cDNA clone:ddc47b05, 3' ... 36 0.024 3
(AC142281) Homo sapiens fosmid clone XXFOS-86667F1 from 4, c... 38 0.026 4
(EI023347) bb01c06.f Dekkera bruxellensis Random Genomic Lib... 38 0.026 3
(FK862566) 0000099973I10 D. serrata mRNA from different deve... 42 0.030 2
(CU655818) Zebrafish DNA sequence from clone CH1073-314M1. 54 0.032 1
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 54 0.032 1
(AC116032) Dictyostelium discoideum chromosome 2 map 4158743... 54 0.032 1
(AC201051) Strongylocentrotus purpuratus clone R3-12N14, WOR... 54 0.032 1
(AC201003) Strongylocentrotus purpuratus clone R3-12F11, WOR... 54 0.032 1
(AC181236) Strongylocentrotus purpuratus clone R3-4010H16, W... 54 0.032 1
(AC178382) Strongylocentrotus purpuratus clone R3-3107H20, W... 54 0.032 1
(AC175961) Strongylocentrotus purpuratus clone R3-3035I23, W... 54 0.032 1
(AC173117) Strongylocentrotus purpuratus clone R3-14E18, WOR... 54 0.032 1
(DY893518) CeleSEQ12876 Cunninghamella elegans pBluescript (... 34 0.033 4
(EI024221) bb50c11.f Dekkera bruxellensis Random Genomic Lib... 38 0.033 3
(AC168371) Strongylocentrotus purpuratus clone R3-4013L1, WO... 42 0.033 7
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 0.035 22
(AF018638) Dictyostelium discoideum unknown (1039) gene, par... 34 0.039 4
(EY356912) CAWZ4617.fwd CAWZ Helobdella robusta Primary Late... 38 0.040 3
(AF029726) Dictyostelium discoideum histidine kinase C (dhkC... 46 0.044 4
(AB365355) Candida boidinii TRM1 gene for Zn(II)2Cys6-type t... 38 0.054 4
(AF361474) Dictyostelium discoideum receptor histidine kinas... 46 0.063 4
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 36 0.064 8
(AB079663) Dictyostelium discoideum mhkC mRNA for myosin hea... 42 0.070 2
(C23753) Dictyostelium discoideum gamete cDNA, clone FC-AF03. 36 0.073 3
(CU151881) Zebrafish DNA sequence from clone CH211-161G17 in... 42 0.079 2
(AF079447) Dictyostelium discoideum myosin heavy chain kinas... 42 0.085 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 40 0.087 3
(DW107864) CLRX5310.b1_L08.ab1 CLR(XYZ) lettuce serriola Lac... 52 0.089 2
(DW107551) CLRX5063.b1_M17.ab1 CLR(XYZ) lettuce serriola Lac... 52 0.089 2
(FC818251) Sr_pAMT7_011g13_T7 S. ratti mixed stage pAMP Stro... 42 0.098 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 46 0.098 2
(FC812597) Sr_pASP6_011g13_SP6 S. ratti mixed stage pAMP Str... 42 0.099 2
(BJ393209) Dictyostelium discoideum cDNA clone:dds30c16, 5' ... 36 0.10 3
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 36 0.11 7
(AC149951) Strongylocentrotus purpuratus clone R3-32B19, WOR... 38 0.12 11
(AF362373) Dictyostelium discoideum histidine kinase DhkL (d... 36 0.12 4
(AC160641) Ornithorhynchus anatinus BAC clone OABb-469P24 fr... 52 0.13 1
(CP000208) Drosophila melanogaster genomic scaffold 21100002... 52 0.13 1
(AF357008) Drosophila melanogaster 5.9 kb tandem repeat sequ... 52 0.13 1
(DX466102) Cpl07966 Papaya Genomic DNA BAC Library Carica pa... 52 0.13 1
(DT412476) JGI_CABI11362.fwd NIH_XGC_tropOvi1 Xenopus (Silur... 52 0.13 1
(DN060323) JGI_CABC1063.fwd NIH_XGC_tropFat1 Xenopus (Silura... 52 0.13 1
(CF220091) AGENCOURT_14995568 NICHD_XGC_Emb5 Xenopus (Silura... 52 0.13 1
(BQ394067) NISC_ng07b01.y1 NICHD_XGC_Emb6 Xenopus (Silurana)... 52 0.13 1
(BE289293) 601089801F1 NCI_CGAP_Mam5 Mus musculus cDNA clone... 52 0.13 1
(AF238325) Dictyostelium discoideum lysosomal integral membr... 32 0.14 5
(DY885459) CeleSEQ708 Cunninghamella elegans pBluescript (Ec... 38 0.14 4
(DN000279) JGI_CAAQ2854.fwd NIH_XGC_tropHrt1 Xenopus (Silura... 38 0.15 3
(DR839572) JGI_CABC8059.rev NIH_XGC_tropFat1 Xenopus (Silura... 38 0.16 3
(DN018555) JGI_CAAR1127.fwd NIH_XGC_tropLiv1 Xenopus (Silura... 38 0.17 3
(FB336970) Sequence 4496 from Patent WO2007110314. 38 0.18 4
(AC176320) Strongylocentrotus purpuratus clone R3-3054H10, W... 38 0.18 10
(AY184994) Dictyostelium discoideum inositol 5-phosphatase 3... 38 0.20 4
(AY232270) Dictyostelium discoideum putative protein Roco8 (... 34 0.20 7
(AU033912) Dictyostelium discoideum slug cDNA, clone SLB606. 36 0.24 3
(EL492767) A02_PFBAMHI-L-T3-PLATE10A.AB1 Blood stage Plasmod... 46 0.24 2
(EC824651) SME00008756 esmbsro2 Sawyeria marylandensis cDNA,... 34 0.24 4
(BM167934) EST570457 PyBS Plasmodium yoelii yoelii cDNA clon... 42 0.24 3
(FF711747) XABT32000.fwd Gateway compatible cien cDNA librar... 32 0.25 4
(BH052080) RPCI-24-243I17.TJ RPCI-24 Mus musculus genomic cl... 42 0.26 2
(BJ407296) Dictyostelium discoideum cDNA clone:dds38i02, 3' ... 38 0.27 3
(CR361562) Zebrafish DNA sequence from clone CH211-281H24 in... 34 0.29 2
(AC175879) Strongylocentrotus purpuratus clone R3-15D21, WOR... 36 0.30 10
(EH014571) USDA-FP_187258 Lysiphlebus testaceipes adult whol... 42 0.31 2
(DB850191) Nilaparvata lugens mRNA, EST clone:NLMA6105, 5' e... 50 0.31 2
(DW006690) SGP296188 Atlantic salmon Brain cDNA library Salm... 28 0.31 5
(BJ381279) Dictyostelium discoideum cDNA clone:ddc41c01, 3' ... 38 0.32 3
(BJ347092) Dictyostelium discoideum cDNA clone:dda26h01, 3' ... 38 0.33 3
(DY894747) CeleSEQ14394 Cunninghamella elegans pBluescript (... 44 0.35 2
(EY352505) CAWZ18856.fwd CAWZ Helobdella robusta Primary Lat... 32 0.35 4
(EH014795) USDA-FP_187460 Lysiphlebus testaceipes adult whol... 36 0.37 2
(EH011551) USDA-FP_184539 Lysiphlebus testaceipes adult whol... 36 0.37 2
(BJ408670) Dictyostelium discoideum cDNA clone:dds46g16, 3' ... 38 0.37 3
(BJ418917) Dictyostelium discoideum cDNA clone:ddv34p08, 5' ... 34 0.37 2
(ED194724) AUAC-aao32b09.g1 Ascaris suum whole genome shotgu... 42 0.38 2
(AC197289) Myotis lucifugus clone CH235-176D16, WORKING DRAF... 42 0.38 4
(BJ406705) Dictyostelium discoideum cDNA clone:dds36m05, 3' ... 38 0.40 3
(DT567288) EST1077928 GH_TMO Gossypium hirsutum cDNA, mRNA s... 38 0.42 3
(BJ407955) Dictyostelium discoideum cDNA clone:dds44o02, 3' ... 38 0.42 3
(AL291152) Tetraodon nigroviridis genome survey sequence PUC... 40 0.42 2
(BJ408903) Dictyostelium discoideum cDNA clone:dds47h10, 3' ... 38 0.43 3
(L04160) Plasmodium falciparum unknown gene. 46 0.44 2
(BH126462) BARC-Satt266 Size-selected soybean genomic Glycin... 34 0.45 3
(DT544843) EST1055483 GH_TMO Gossypium hirsutum cDNA, mRNA s... 38 0.47 3
(CU326359) Zebrafish DNA sequence from clone CH211-79A2 in l... 50 0.50 1
(CU182107) Zebrafish DNA sequence from clone DKEY-260J10. 50 0.50 1
(CR854826) Zebrafish DNA sequence from clone DKEY-120E17 in ... 50 0.50 1
(CR450720) Zebrafish DNA sequence from clone DKEYP-51F11 in ... 50 0.50 1
(BX088591) Zebrafish DNA sequence from clone CH211-205N20. 50 0.50 1
(BX005183) Zebrafish DNA sequence from clone CH211-136A14 in... 50 0.50 1
(CT030198) Platypus DNA sequence from clone XX-300J13. 50 0.50 1
(CR938721) Platypus DNA sequence from clone CLM1-231M12. 50 0.50 1
(AC186150) Ornithorhynchus anatinus chromosome UNK clone OAB... 50 0.50 1
(AC153157) Ornithorhynchus anatinus BAC clone OABb-358D20 fr... 50 0.50 1
(AC152565) Ornithorhynchus anatinus chromosome UNK clone OAB... 50 0.50 1
(AC152002) Ornithorhynchus anatinus chromosome UNK clone OAB... 50 0.50 1
(AC151776) Ornithorhynchus anatinus chromosome UNK clone OAB... 50 0.50 1
(AC158429) Ornithorhynchus anatinus clone OA_Bb-39B24, WORKI... 50 0.50 1
(AC154065) Ornithorhynchus anatinus clone OA_Bb-426A17, WORK... 50 0.50 1
(AC153741) Ornithorhynchus anatinus clone OA_Bb-10N20, WORKI... 50 0.50 1
(AC153086) Ornithorhynchus anatinus clone OA_Bb-37C22, WORKI... 50 0.50 1
(AC147587) Ornithorhynchus anatinus clone OA_Bb-560F18, WORK... 50 0.50 1
(AC108979) Rattus norvegicus clone CH230-158H12, *** SEQUENC... 50 0.50 1
(AC096121) Rattus norvegicus clone CH230-11B23, WORKING DRAF... 50 0.50 1
(CR762490) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.50 1
(AC233013) Ornithorhynchus anatinus clone CH236-589C4, WORKI... 50 0.50 1
(AC232918) Ornithorhynchus anatinus clone OA_Bb-506G15, WORK... 50 0.50 1
(AC226286) Ornithorhynchus anatinus clone OA_Bb-454P6, WORKI... 50 0.50 1
(AC216172) Ornithorhynchus anatinus clone OA_Bb-179A20, WORK... 50 0.50 1
(AC203515) Ornithorhynchus anatinus clone OA_Bb-483J12, WORK... 50 0.50 1
(AC199686) Ornithorhynchus anatinus clone OA_Bb-512F21, WORK... 50 0.50 1
(AC199682) Ornithorhynchus anatinus clone OA_Bb-220F16, WORK... 50 0.50 1
(AC197996) Ornithorhynchus anatinus clone OA_Bb-81H13, WORKI... 50 0.50 1
(AC195440) Ornithorhynchus anatinus clone OA_Bb-527P22, WORK... 50 0.50 1
(AC195054) Ornithorhynchus anatinus clone OA_Bb-576E3, WORKI... 50 0.50 1
(AC194524) Ornithorhynchus anatinus clone OA_Bb-464G14, WORK... 50 0.50 1
(AC194520) Ornithorhynchus anatinus clone OA_Bb-305N6, WORKI... 50 0.50 1
(AC193846) Ornithorhynchus anatinus clone OA_Bb-131K16, WORK... 50 0.50 1
(AC193080) Ornithorhynchus anatinus clone OA_Bb-36C16, WORKI... 50 0.50 1
(AC192916) Ornithorhynchus anatinus clone OA_Bb-42N22, WORKI... 50 0.50 1
(AC192043) Ornithorhynchus anatinus clone OA_Bb-432F3, WORKI... 50 0.50 1
(AC185161) Ornithorhynchus anatinus clone OA_Bb-226H18, WORK... 50 0.50 1
(DX403740) GK_Sa0005M14.b1 Gossypioides kirkii WGS library G... 50 0.50 1
(BX173144) Danio rerio genomic clone DKEY-175O10, genomic su... 50 0.50 1
(CT585377) Danio rerio EST, clone ZF_mu_47j07 5'. 50 0.50 1
(BY368529) Mus musculus 6 days neonate spleen cDNA, RIKEN fu... 50 0.50 1
(FK258875) USDA-FP_194838 Asian citrus psyllid midgut (Hemip... 50 0.50 1
(FK255139) USDA-FP_191102 Asian citrus psyllid midgut (Hemip... 50 0.50 1
(FE753424) CAYF2974.g1 CAYF Petrolisthes cinctipes heart, wh... 50 0.50 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 48 0.55 3
(AF024654) Dictyostelium discoideum hybrid histidine kinase ... 44 0.57 3
(DY893350) CeleSEQ12662 Cunninghamella elegans pBluescript (... 34 0.59 3
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 36 0.59 11
(BM958706) PLATE_16_E09_09.AB1 GS Lambda-Triplex, 10 day ger... 38 0.60 2
(AC116100) Dictyostelium discoideum chromosome 2 map 6163571... 46 0.63 7
(AC181955) Strongylocentrotus purpuratus clone R3-1004H8, WO... 40 0.63 4
(BJ359963) Dictyostelium discoideum cDNA clone:ddc3d14, 5' e... 34 0.67 3
(EX165734) B02_P-17_014 Cotton 1-14 day post anthesis Lambda... 38 0.69 3
(BE029820) kp35c11.y1 TBN95TM-SSFH Strongyloides stercoralis... 46 0.70 2
(CU468817) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.70 5
(AJ224893) Dictyostelium discoideum srfA gene. 34 0.74 4
(AL844506) Plasmodium falciparum chromosome 7. 44 0.75 3
(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (... 34 0.75 5
(BP190393) Dugesia japonica cDNA, clone: 04718_HH, expressed... 36 0.77 3
(CA049894) ssalsrkc005029 kidney Salmo salar cDNA, mRNA sequ... 30 0.77 4
(AC171158) Atelerix albiventris clone LB4-335J5, WORKING DRA... 38 0.80 8
(AF088979) Dictyostelium discoideum beige protein homolog (l... 44 0.80 6
(EX326111) GQ02824.SP6_I05 GQ028 - Cambium / phloem scrappin... 44 0.82 2
(BJ388332) Dictyostelium discoideum cDNA clone:dds9c05, 5' e... 32 0.83 3
(AC190397) Pongo abelii BAC clone CH276-21H12 from chromosom... 42 0.85 7
(BE224398) kp62e02.y1 TBN95TM-SSFH Strongyloides stercoralis... 46 0.85 2
(AC160024) Pan troglodytes BAC clone CH251-374N3 from chromo... 36 0.88 7
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 36 0.89 9
(AM446173) Vitis vinifera contig VV78X211655.5, whole genome... 40 0.89 4
(CC118479) NDL.57P2.SP6 Notre Dame Liverpool Aedes aegypti g... 32 0.91 4
(AY240956) Plasmodium falciparum DNA mismatch repair enzyme ... 42 0.91 4
(ES846268) UFL_131_54 Cotton fiber 0-10 day post anthesis Go... 38 0.93 3
(AY245859) Homo sapiens chromosome 5 clone RP11-422K3, *** S... 36 0.94 10
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 42 0.94 9
(AC180701) Strongylocentrotus purpuratus clone R3-3087G21, W... 38 0.95 10
(AZ188093) SP_1011_B1_A04_T7A Strongylocentrotus purpuratus,... 42 0.95 2
(AL034558) Plasmodium falciparum MAL3P2. 42 0.96 12
(AL000288) F.rubripes GSS sequence, clone 007M11dF8. 42 0.97 2
(AV976089) Ciona intestinalis cDNA, clone:cieg40o02, 5' end,... 38 0.97 2
(CT573057) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.98 7
(AM457747) Vitis vinifera, whole genome shotgun sequence, co... 42 0.98 5
(EG353347) SAAH-aad40d08.b1 Agen 0058 Schmidtea mediterranea... 34 0.99 3
(BJ323953) Dictyostelium discoideum cDNA clone:dda4e06, 5' e... 32 1.0 3
(AC147856) Atelerix albiventris clone LB4-158N8, WORKING DRA... 36 1.0 8
(AC177462) Strongylocentrotus purpuratus clone R3-61A2, WORK... 36 1.0 2
(ED663194) GM_WBa0087J03.f GM_WBa Glycine max genomic clone ... 34 1.0 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 40 1.0 3
(AM456410) Vitis vinifera contig VV78X121672.4, whole genome... 44 1.0 2
(AC178023) Strongylocentrotus purpuratus clone R3-3055H13, W... 36 1.0 2
(C92238) Dictyostelium discoideum slug cDNA, clone SSD278. 44 1.1 2
(EU913123) Pediculus humanus genotype 28 intergenic spacer 2... 46 1.1 2
(AC190452) Atelerix albiventris clone LB4-204B7, WORKING DRA... 38 1.1 4
(AC114043) Rattus norvegicus clone CH230-187H10, WORKING DRA... 34 1.1 10
(AC201538) Strongylocentrotus purpuratus clone R3-3096O24, W... 36 1.1 2
(EU913146) Pediculus humanus genotype 51 intergenic spacer 2... 46 1.1 2
(BW314167) Ciona intestinalis cDNA, clone:ciht028l09, 5' end... 38 1.1 2
(EU913147) Pediculus humanus genotype 52 intergenic spacer 2... 46 1.1 2
(BJ329058) Dictyostelium discoideum cDNA clone:dda30i15, 5' ... 32 1.1 3
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 38 1.1 3
(EU913124) Pediculus humanus genotype 29 intergenic spacer 2... 46 1.1 2
(EU913137) Pediculus humanus genotype 42 intergenic spacer 2... 46 1.1 2
(EU913132) Pediculus humanus genotype 37 intergenic spacer 2... 46 1.1 2
(EU913131) Pediculus humanus genotype 36 intergenic spacer 2... 46 1.1 2
(EU913127) Pediculus humanus genotype 32 intergenic spacer 2... 46 1.1 2
(DE103947) Oryzias latipes DNA, clone: ola1-138B23.F, genomi... 36 1.1 3
(AC118396) Rattus norvegicus clone CH230-112E22, WORKING DRA... 42 1.1 14
(EU913149) Pediculus humanus genotype 54 intergenic spacer 2... 46 1.1 2
(EU913136) Pediculus humanus genotype 41 intergenic spacer 2... 46 1.1 2
(EU913134) Pediculus humanus genotype 39 intergenic spacer 2... 46 1.1 2
(EU913133) Pediculus humanus genotype 38 intergenic spacer 2... 46 1.1 2
(EU913130) Pediculus humanus genotype 35 intergenic spacer 2... 46 1.1 2
(EU913129) Pediculus humanus genotype 34 intergenic spacer 2... 46 1.1 2
(EU913128) Pediculus humanus genotype 33 intergenic spacer 2... 46 1.1 2
(EU913126) Pediculus humanus genotype 31 intergenic spacer 2... 46 1.1 2
(EU913171) Pediculus humanus genotype 76 intergenic spacer 2... 46 1.1 2
(EU913150) Pediculus humanus genotype 55 intergenic spacer 2... 46 1.1 2
(EG412548) SAAH-aaa96e10.b1 Agen 0058 Schmidtea mediterranea... 34 1.1 3
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 42 1.1 9
(CU137653) Human DNA sequence from clone XX-C0511C0695L on c... 42 1.1 5
(EU913163) Pediculus humanus genotype 68 intergenic spacer 2... 46 1.1 2
(EU913162) Pediculus humanus genotype 67 intergenic spacer 2... 46 1.1 2
(EU913151) Pediculus humanus genotype 56 intergenic spacer 2... 46 1.1 2
(EU913138) Pediculus humanus genotype 43 intergenic spacer 2... 46 1.1 2
(EU913174) Pediculus humanus genotype 79 intergenic spacer 2... 46 1.1 2
(EU913173) Pediculus humanus genotype 78 intergenic spacer 2... 46 1.1 2
(EU913172) Pediculus humanus genotype 77 intergenic spacer 2... 46 1.1 2
(EU913166) Pediculus humanus genotype 71 intergenic spacer 2... 46 1.1 2
(EU913164) Pediculus humanus genotype 69 intergenic spacer 2... 46 1.1 2
(EU913161) Pediculus humanus genotype 66 intergenic spacer 2... 46 1.1 2
(EU913160) Pediculus humanus genotype 65 intergenic spacer 2... 46 1.1 2
(EU913125) Pediculus humanus genotype 30 intergenic spacer 2... 46 1.1 2
(EU913167) Pediculus humanus genotype 72 intergenic spacer 2... 46 1.1 2
(AC176845) Strongylocentrotus purpuratus clone R3-3120G9, WO... 42 1.2 7
(BW487279) Ciona intestinalis cDNA, clone:cima026p09, 5'end,... 38 1.2 2
(AC206406) Pongo abelii BAC clone CH276-477J4 from chromosom... 42 1.2 7
(DW340527) SGP310602 Atlantic salmon Ovaries cDNA library Sa... 30 1.2 4
(FF782303) XABT81085.fwd Gateway compatible cien cDNA librar... 38 1.2 2
(BJ402508) Dictyostelium discoideum cDNA clone:dds17m01, 3' ... 40 1.2 2
(EG404700) SAAH-aab88g07.b1 Agen 0058 Schmidtea mediterranea... 34 1.2 3
(BW479307) Ciona intestinalis cDNA, clone:cima021b24, 5'end,... 38 1.2 2
(EX393587) GQ03325.B7_N09 GQ033 - Terminal leader (Normalize... 44 1.2 2
(BJ382838) Dictyostelium discoideum cDNA clone:ddc46d04, 3' ... 40 1.2 2
(AC215671) Populus trichocarpa clone ACSB917-E01, complete s... 42 1.3 4
(BJ376516) Dictyostelium discoideum cDNA clone:ddc28i21, 3' ... 40 1.3 2
(EH695075) CCIM6952.b1_O09.ab1 CCI(LMS) chicory Cichorium in... 40 1.3 2
(FF720379) XABT37709.fwd Gateway compatible cien cDNA librar... 38 1.3 2
(GE540412) CCHS26843.b1_F16.ab1 CCHS Espina Barnadesia spino... 40 1.4 2
(DR552661) WS03223.C21_N10 WS-MC-N-A-20 Picea glauca cDNA cl... 44 1.4 2
(EX368165) GQ03213.SP6_E20 GQ032 - Shoot tip (Normalized lib... 44 1.4 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 46 1.4 2
(BJ378925) Dictyostelium discoideum cDNA clone:ddc33c11, 3' ... 40 1.4 2
(EG406013) SAAH-aac05g08.b1 Agen 0058 Schmidtea mediterranea... 34 1.4 3
(ER821169) PPTI587TR Solanum tuberosum RHPOTKEY BAC ends Sol... 38 1.4 2
(CZ893548) ucra002f001m03f0 Fern methylation unfiltered libr... 32 1.4 4
(DR548623) WS03213.C21_D14 WS-MC-N-A-20 Picea glauca cDNA cl... 44 1.4 2
(AZ138357) SP_0159_B2_D11_T7A Strongylocentrotus purpuratus,... 42 1.4 2
(AX573243) Sequence 89 from Patent WO02074992. 36 1.5 10
(AY160101) Dictyostelium discoideum strain AX4 nucleotide ex... 34 1.5 5
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 46 1.5 20
(AB082543) Dictyostelium discoideum forB gene for formin hom... 38 1.5 2
(AC181341) Strongylocentrotus purpuratus clone R3-40C5, WORK... 44 1.5 6
(BX663522) Zebrafish DNA sequence from clone CH211-261E11 in... 42 1.5 9
(CU467824) Zebrafish DNA sequence from clone CH211-165B10 in... 42 1.5 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 44 1.5 2
(AG513199) Mus musculus molossinus DNA, clone:MSMg01-417K19.... 42 1.6 3
(AC176684) Strongylocentrotus purpuratus clone R3-3088D13, W... 38 1.7 9
(AC173936) Atelerix albiventris clone LB4-66O19, WORKING DRA... 38 1.7 9
(AC141372) Rattus norvegicus clone CH230-160L17, WORKING DRA... 40 1.7 7
(AC113389) Homo sapiens chromosome 5 clone RP11-35A11, compl... 36 1.7 12
(EY336671) CAWY7839.fwd CAWY Helobdella robusta Subtracted E... 30 1.7 4
(CT963110) Medicago truncatula chromosome 5 clone mth2-64f16... 36 1.7 9
(FC774800) CBBN8576.rev CBBN Lottia gigantea 3,4,5,6.5d Larv... 42 1.7 3
(AC127323) Mus musculus BAC clone RP23-242D19 from 18, compl... 40 1.7 11
(AC180732) Strongylocentrotus purpuratus clone R3-3083M18, W... 42 1.8 6
(DL092615) Diagnosis of existing illnesses or that praedispo... 34 1.8 4
(DL092614) Diagnosis of existing illnesses or that praedispo... 34 1.8 4
(DL015980) Diagnosis of existing illnesses or that praedispo... 34 1.8 4
(DL015979) Diagnosis of existing illnesses or that praedispo... 34 1.8 4
(AF482386) Dictyostelium discoideum ABC transporter AbcG7 (a... 46 1.9 3
(CU013547) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 1.9 5
(CU571323) Zebrafish DNA sequence from clone CH73-211L2 in l... 48 2.0 1
(CU571318) Zebrafish DNA sequence from clone CH73-162J3 in l... 48 2.0 1
(CU570884) Zebrafish DNA sequence from clone CH73-201B6 in l... 48 2.0 1
(CU570771) Zebrafish DNA sequence from clone CH211-243K12 in... 48 2.0 1
(CU210952) Zebrafish DNA sequence from clone DKEY-264B24 in ... 48 2.0 1
(CR394570) Zebrafish DNA sequence from clone DKEYP-9D9 in li... 48 2.0 1
(BX936377) Zebrafish DNA sequence from clone DKEY-149J2 in l... 48 2.0 1
(BX927092) Zebrafish DNA sequence from clone CH211-69I15 in ... 48 2.0 1
(BX914203) Zebrafish DNA sequence from clone CH211-22E19 in ... 48 2.0 1
(BX649400) Zebrafish DNA sequence from clone CH211-282J22 in... 48 2.0 1
(BX649363) Zebrafish DNA sequence from clone CH211-13C3 in l... 48 2.0 1
(BX571715) Zebrafish DNA sequence from clone DKEY-6E3 in lin... 48 2.0 1
(BX511060) Zebrafish DNA sequence from clone CH211-210L19 in... 48 2.0 1
(BX247873) Zebrafish DNA sequence from clone CH211-198O12 in... 48 2.0 1
(BX088581) Zebrafish DNA sequence from clone CH211-209H6 in ... 48 2.0 1
(AL954688) Zebrafish DNA sequence from clone CH211-212L1 in ... 48 2.0 1
(AF533976) Oreochromis niloticus unknown sequence. 48 2.0 1
(BX005263) Mouse DNA sequence from clone RP23-395K13 on chro... 48 2.0 1
(AL929553) Mouse DNA sequence from clone RP24-316B1 on chrom... 48 2.0 1
(AL669920) Mouse DNA sequence from clone RP23-263C23 on chro... 48 2.0 1
(AC174083) Mus musculus BAC clone RP23-25B17 from chromosome... 48 2.0 1
(AC147044) Mus musculus BAC clone RP23-106B19 from chromosom... 48 2.0 1
(AC140304) Mus musculus BAC clone RP23-386K4 from 15, comple... 48 2.0 1
(AC126798) Mus musculus BAC clone RP24-229N7 from chromosome... 48 2.0 1
(AC123534) Mus musculus BAC clone RP23-356I5 from chromosome... 48 2.0 1
(AC108774) Mus musculus chromosome 1, clone RP23-249J23, com... 48 2.0 1
(BX000509) Oryza sativa chromosome 12, . BAC OJ1085_G07 of l... 48 2.0 1
(BX000507) Oryza sativa chromosome 12, . BAC OJ1003_C01 of l... 48 2.0 1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN... 48 2.0 1
(AP008217) Oryza sativa (japonica cultivar-group) genomic DN... 48 2.0 1
(AM441001) Vitis vinifera contig VV78X033590.17, whole genom... 48 2.0 1
(AM407961) Eberhardtia aurata partial aat gene for aspartate... 48 2.0 1
(AK102595) Oryza sativa Japonica Group cDNA clone:J033098H20... 48 2.0 1
(AK063914) Oryza sativa Japonica Group cDNA clone:001-123-A1... 48 2.0 1
(AC123525) Oryza sativa (japonica cultivar-group) chromosome... 48 2.0 1
(AC123516) Oryza sativa (japonica cultivar-group) chromosome... 48 2.0 1
(EA727897) Sequence 106776 from patent US 7365185. 48 2.0 1
(EA683850) Sequence 62729 from patent US 7365185. 48 2.0 1
(EA683801) Sequence 62680 from patent US 7365185. 48 2.0 1
(AC155227) Rhinolophus ferrumequinum clone VMRC7-4K1, comple... 48 2.0 1
(AC154109) Ornithorhynchus anatinus chromosome UNK clone OAB... 48 2.0 1
(AC151759) Ornithorhynchus anatinus chromosome UNK clone OAB... 48 2.0 1
(AC150242) Rhinolophus ferrumequinum clone VMRC7-331J24, com... 48 2.0 1
(FM162571) Trypanosoma brucei Lister 427 surface glycoprotei... 48 2.0 1
(FM162570) Trypanosoma brucei Lister 427 surface glycoprotei... 48 2.0 1
(AJ314911) Dictyostelium discoideum DrnA gene for putative R... 48 2.0 1
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881... 48 2.0 1
(AL590763) Homo sapiens chromosome X sequence from 6 PACs 1... 48 2.0 1
(AL133551) Human DNA sequence from clone RP11-57G10 on chrom... 48 2.0 1
(AC134511) Homo sapiens 12 BAC RP11-528M24 (Roswell Park Can... 48 2.0 1
(AC096645) Homo sapiens chromosome 1 clone RP11-450D21, comp... 48 2.0 1
(AC073311) Homo sapiens BAC clone RP11-61D3 from 7, complete... 48 2.0 1
(AC019197) Homo sapiens BAC clone RP11-361O8 from 2, complet... 48 2.0 1
(AC006379) Homo sapiens BAC clone RP11-456N16 from 7p15.1-p1... 48 2.0 1
(AC005826) Homo sapiens clone SCb-41A3 from 7p14-15, complet... 48 2.0 1
(AC004800) Homo sapiens chromosome 7 clone UWGC:g3586a230 fr... 48 2.0 1
(AB191243) Homo sapiens DNA, transposon SVA sequence. 48 2.0 1
(AC161080) Bos taurus clone CH240-51A6, WORKING DRAFT SEQUEN... 48 2.0 1
(AC157242) Ornithorhynchus anatinus clone OA_Bb-318N15, WORK... 48 2.0 1
(AC156349) Ornithorhynchus anatinus clone OA_Bb-105B11, WORK... 48 2.0 1
(AC152556) Mus musculus chromosome 15 clone RP23-434N21, ***... 48 2.0 1
(AC148220) Colobus guereza clone CH272-179O16, WORKING DRAFT... 48 2.0 1
(AC141850) Papio anubis clone RP41-329O9, WORKING DRAFT SEQU... 48 2.0 1
(AC140961) Papio anubis clone RP41-7B12, WORKING DRAFT SEQUE... 48 2.0 1
(AC137857) Mus musculus clone RP24-511F5, WORKING DRAFT SEQU... 48 2.0 1
(AC119483) Rattus norvegicus clone CH230-430G6, *** SEQUENCI... 48 2.0 1
(AC113854) Rattus norvegicus clone CH230-156P22, *** SEQUENC... 48 2.0 1
(AC112810) Rattus norvegicus clone CH230-361J6, *** SEQUENCI... 48 2.0 1
(AC107329) Rattus norvegicus clone CH230-173A24, WORKING DRA... 48 2.0 1
(FP085417) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 2.0 1
(CU993821) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 2.0 1
(CU929417) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 2.0 1
(CU929336) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 2.0 1
(CU694650) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(CU633415) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(AC073251) Homo sapiens chromosome 1 clone RP11-102D20, WORK... 48 2.0 1
(AC027179) Homo sapiens chromosome 12 clone RP11-528M24 map ... 48 2.0 1
(CU469183) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(CU367851) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(CU302429) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(CU075907) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(CT827803) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(CT737371) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.0 1
(CR925712) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 48 2.0 1
(BX901969) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 2.0 1
(AL159989) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 2.0 1
(AC233145) Colobus guereza clone CH272-100J24, WORKING DRAFT... 48 2.0 1
(AC230457) Bos taurus clone CH240-508A3, WORKING DRAFT SEQUE... 48 2.0 1
(AC219646) Bos taurus clone CH240-326K8, WORKING DRAFT SEQUE... 48 2.0 1
(AC216337) Ornithorhynchus anatinus clone OA_Bb-310N2, WORKI... 48 2.0 1
(AC208912) Zea mays chromosome 6 clone CH201-71L18; ZMMBBc00... 48 2.0 1
(AC202722) Macaca mulatta clone CH250-389A3, WORKING DRAFT S... 48 2.0 1
(AC200002) Ornithorhynchus anatinus clone OA_Bb-203A16, WORK... 48 2.0 1
(AC196620) Ornithorhynchus anatinus clone OA_Bb-271F2, WORKI... 48 2.0 1
(AC191482) Ornithorhynchus anatinus clone OA_Bb-144E15, WORK... 48 2.0 1
(AC187669) Aotus nancymaae clone CH258-14G9, WORKING DRAFT S... 48 2.0 1
(AC184915) Bos taurus clone CH240-219K23, WORKING DRAFT SEQU... 48 2.0 1
(AC184636) Strongylocentrotus purpuratus clone R3-4015O21, W... 48 2.0 1
(AC181772) Strongylocentrotus purpuratus clone R3-1034K17, W... 48 2.0 1
(AC181739) Strongylocentrotus purpuratus clone R3-1037I08, W... 48 2.0 1
(AC180794) Strongylocentrotus purpuratus clone R3-3073H18, W... 48 2.0 1
(AC180152) Strongylocentrotus purpuratus clone R3-4005C08, W... 48 2.0 1
(AC179935) Strongylocentrotus purpuratus clone R3-3031N19, W... 48 2.0 1
(AC179444) Strongylocentrotus purpuratus clone R3-1040H5, WO... 48 2.0 1
(AC178101) Strongylocentrotus purpuratus clone R3-3068J4, WO... 48 2.0 1
(AC177704) Strongylocentrotus purpuratus clone R3-1011K14, W... 48 2.0 1
(AC177523) Strongylocentrotus purpuratus clone R3-1027C14, W... 48 2.0 1
(AC176140) Strongylocentrotus purpuratus clone R3-2B17, WORK... 48 2.0 1
(AC175916) Strongylocentrotus purpuratus clone R3-3043I24, W... 48 2.0 1
(AC169750) Bos taurus clone CH240-215P22, WORKING DRAFT SEQU... 48 2.0 1
(AC169060) Bos taurus clone CH240-199J1, WORKING DRAFT SEQUE... 48 2.0 1
(AC168846) Strongylocentrotus purpuratus clone R3-13A6, WORK... 48 2.0 1
(AC168751) Strongylocentrotus purpuratus clone R3-3004M17, W... 48 2.0 1
(AC166155) Mus musculus chromosome 15 clone RP24-393H14, ***... 48 2.0 1
(AC009939) Homo sapiens clone RP11-115C5, LOW-PASS SEQUENCE ... 48 2.0 1
(AK016768) Mus musculus adult male testis cDNA, RIKEN full-l... 48 2.0 1
(AQ795620) nbxb0056E14r CUGI Rice BAC Library Oryza sativa J... 48 2.0 1
(FI244115) CccaBb009-B5JR CccABb Cajanus cajan genomic clone... 48 2.0 1
(FH692527) CHO_OF5115xj19r1.ab1 CHO_OF5 Nicotiana tabacum ge... 48 2.0 1
(FH688593) CHO_OF5092xk12r1.ab1 CHO_OF5 Nicotiana tabacum ge... 48 2.0 1
(FH540364) CHO_OF4121xj21r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 2.0 1
(EI445598) PV_GBa0043C13.f PV_GBa Phaseolus vulgaris genomic... 48 2.0 1
(EI417431) PV_GBa0003K06.f PV_GBa Phaseolus vulgaris genomic... 48 2.0 1
(EI263330) OR__Ba0070D13.r OR__Ba Oryza rufipogon genomic cl... 48 2.0 1
(EI236559) OR__Ba0033J06.r OR__Ba Oryza rufipogon genomic cl... 48 2.0 1
(ED936286) OA_CBa0117J16.f OA_CBa Oryza australiensis genomi... 48 2.0 1
(ED656798) GM_WBa0076J08.f GM_WBa Glycine max genomic clone ... 48 2.0 1
(ED626093) GM_WBa0023N24.r GM_WBa Glycine max genomic clone ... 48 2.0 1
(DU562364) OO__Ba0044N05.r OO__Ba Oryza officinalis genomic ... 48 2.0 1
(CZ693163) OA_BBa0166L17.r OA_BBa Oryza alta genomic clone O... 48 2.0 1
(CZ625792) OM__Ba0164L04.f OM__Ba Oryza minuta genomic clone... 48 2.0 1
(CZ572789) OA_BBa0149M21.f OA_BBa Oryza alta genomic clone O... 48 2.0 1
(CZ430817) OA_BBa0132E20.f OA_BBa Oryza alta genomic clone O... 48 2.0 1
(CZ132358) OA_BBa0025B05.f OA_BBa Oryza alta genomic clone O... 48 2.0 1
(CW881333) sh2c3-91.b_099.ab1 Whole-genome shotgun library o... 48 2.0 1
(CW694568) OG_BBa0055E09.f OG_BBa Oryza glaberrima genomic c... 48 2.0 1
(CW598280) OA_ABa0135B23.r OA_ABa Oryza australiensis genomi... 48 2.0 1
(CW506971) OP__Ba0006N07.r OP__Ba Oryza punctata genomic clo... 48 2.0 1
(CW033400) 104_262_10501935_114_30361 Sorghum methylation fi... 48 2.0 1
(CU843371) A BAC library has been constructed from PN40024 g... 48 2.0 1
(CT557851) A BAC library has been constructed from cultivar ... 48 2.0 1
(CT431780) Sus scrofa genomic clone CH242-470L13, genomic su... 48 2.0 1
(CL980013) OsIFCC034040 Oryza sativa Express Library Oryza s... 48 2.0 1
(CL978507) OsIFCC032010 Oryza sativa Express Library Oryza s... 48 2.0 1
(CL818379) OR_CBa0036E14.r OR_CBa Oryza rufipogon genomic cl... 48 2.0 1
(CL809673) OR_CBa0024I22.f OR_CBa Oryza rufipogon genomic cl... 48 2.0 1
(CL399221) ZMMBBb0400P06r ZMMBBb (HindIII) Zea mays subsp. m... 48 2.0 1
(EH218264) USDA-FP_181067 WHMH (pink hibiscus mealybug) Maco... 48 2.0 1
(EH216445) USDA-FP_179239 WHMH (pink hibiscus mealybug) Maco... 48 2.0 1
(EH214400) USDA-FP_177187 WHMH (pink hibiscus mealybug) Maco... 48 2.0 1
(EH012825) USDA-FP_185687 Lysiphlebus testaceipes adult whol... 48 2.0 1
(EC326207) GUTF089550D20 POSSUM_01-POSSUM-GUT-2KB Trichosuru... 48 2.0 1
(DV413935) NADWC19TF Aedes aegypti infected with Dengue viru... 48 2.0 1
(DV379726) NACN070TO Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV379725) NACN070TF Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV371818) NACMC28TO Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV371817) NACMC28TF Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV364373) NACA423TF Aedes aegypti infected with Brugia Mala... 48 2.0 1
(DV349458) NABXO63TO Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV349457) NABXO63TF Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV327094) NABR327TO Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV327093) NABR327TF Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV327039) NABT695TF Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV324865) NABRV27TF Aedes aegypti infected with Plasmodium ... 48 2.0 1
(DV320759) NABS181TO Aedes aegypti infected with Plasmodium ... 48 2.0 1

>(BJ364456) Dictyostelium discoideum cDNA clone:ddc31d21, 5' end,
single read.
Length = 633

Score = 1255 bits (633), Expect = 0.0
Identities = 633/633 (100%)
Strand = Plus / Plus


Query: 204 aagttttaacggttgaaccatcttcatcaattccttatgtttgggatttaccattggaag 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttttaacggttgaaccatcttcatcaattccttatgtttgggatttaccattggaag 60


Query: 264 atcatattttagaggtattagtacatatatcaaccaatcaaagtgaaaaggcatcttata 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcatattttagaggtattagtacatatatcaaccaatcaaagtgaaaaggcatcttata 120


Query: 324 agatggataaaattaaaacttttagaccaatggaatttaatgatgatcataatcctgtgg 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatggataaaattaaaacttttagaccaatggaatttaatgatgatcataatcctgtgg 180


Query: 384 ttattaaagcgattgttgaagctgatgaatcaactcgtgtattaacactctctgataaga 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttattaaagcgattgttgaagctgatgaatcaactcgtgtattaacactctctgataaga 240


Query: 444 catcatttcaaattagtaaatatgaagaagagaatttacgtcaatcatttagaattcatt 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcatttcaaattagtaaatatgaagaagagaatttacgtcaatcatttagaattcatt 300


Query: 504 tcactggtatcggtatatcagttattaatgcaaatccaacagaacttctttacgtttcaa 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcactggtatcggtatatcagttattaatgcaaatccaacagaacttctttacgtttcaa 360


Query: 564 ttcatgatatcctttgtgaatatttcattagtagttttcttcaaaagttagagatgaaaa 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcatgatatcctttgtgaatatttcattagtagttttcttcaaaagttagagatgaaaa 420


Query: 624 ttacaaatattcaagttgataatcaattatcaaaagttacaccctatagtcacccagttt 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttacaaatattcaagttgataatcaattatcaaaagttacaccctatagtcacccagttt 480


Query: 684 tattatttgcagataatctattaccaaatacaccattcttacaagttagaatagtaaaat 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tattatttgcagataatctattaccaaatacaccattcttacaagttagaatagtaaaat 540


Query: 744 caatgaaaatgaaaaatattgattactatcatcatgtctctttgaaaatgcaagaattaa 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caatgaaaatgaaaaatattgattactatcatcatgtctctttgaaaatgcaagaattaa 600


Query: 804 acattaaagttgaagagaaattcctttacgtat 836
|||||||||||||||||||||||||||||||||
Sbjct: 601 acattaaagttgaagagaaattcctttacgtat 633

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 3,706,704,514
Number of extensions: 237720897
Number of successful extensions: 23231720
Number of sequences better than 10.0: 1272
Length of query: 3073
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 3048
Effective length of database: 96,311,147,814
Effective search space: 293556378537072
Effective search space used: 293556378537072
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15773-1 (Contig-U15773-1Q) /CSM_Contig/Contig-U15773-1Q.Seq.d
(3073 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q55EI3) RecName: Full=Putative vacuolar protein sorting-associa... 1083 0.0
(Q54LB8) RecName: Full=Putative vacuolar protein sorting-associa... 231 1e-58
AF079445_1(AF079445|pid:none) Dictyostelium discoideum TipC (tip... 201 1e-49
(Q54LN2) RecName: Full=Putative vacuolar protein sorting-associa... 171 1e-40
CU329671_1546(CU329671|pid:none) Schizosaccharomyces pombe chrom... 166 4e-39
CR382132_294(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 152 9e-35
AM920437_609(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 149 5e-34
AP007155_926(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 149 6e-34
(Q54KX3) RecName: Full=Putative vacuolar protein sorting-associa... 148 1e-33
AM270077_11(AM270077|pid:none) Aspergillus niger contig An04c016... 143 4e-32
AC116957_70(AC116957|pid:none) Dictyostelium discoideum chromoso... 142 6e-32
AE017343_227(AE017343|pid:none) Cryptococcus neoformans var. neo... 135 7e-30
FN392319_519(FN392319|pid:none) Pichia pastoris GS115 chromosome... 127 2e-27
CR382125_24(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 127 2e-27
(Q07878) RecName: Full=Vacuolar protein sorting-associated prote... 124 2e-26
CR380949_126(CR380949|pid:none) Candida glabrata strain CBS138 c... 123 5e-26
CU928179_318(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 121 1e-25
FM992691_533(FM992691|pid:none) Candida dubliniensis CD36 chromo... 120 4e-25
Z80220_4(Z80220|pid:none) Caenorhabditis elegans Cosmid T08G11, ... 117 3e-24
T24692(T24692) hypothetical protein T08G11.1 - Caenorhabditis el... 117 3e-24
(Q9H995) RecName: Full=Vacuolar protein sorting-associated prote... 115 1e-23
AJ608769_1(AJ608769|pid:none) Homo sapiens mRNA for chorein 2A (... 115 1e-23
AB023203_1(AB023203|pid:none) Homo sapiens mRNA for KIAA0986 pro... 115 1e-23
AF337532_1(AF337532|pid:none) Homo sapiens chorea-acanthocytosis... 115 1e-23
FN357331_29(FN357331|pid:none) Schistosoma mansoni genome sequen... 115 1e-23
CR858808_1(CR858808|pid:none) Pongo abelii mRNA; cDNA DKFZp459B0... 114 2e-23
(Q9BGZ0) RecName: Full=Vacuolar protein sorting-associated prote... 114 2e-23
AK172952_1(AK172952|pid:none) Mus musculus mRNA for mKIAA0453 pr... 112 8e-23
AL606909_4(AL606909|pid:none) Mouse DNA sequence from clone RP23... 112 8e-23
AL606909_5(AL606909|pid:none) Mouse DNA sequence from clone RP23... 112 8e-23
BC028115_1(BC028115|pid:none) Homo sapiens vacuolar protein sort... 110 2e-22
(Q9UIM0) RecName: Full=Vacuolar protein sorting-associated prote... 110 2e-22
AJ608775_1(AJ608775|pid:none) Homo sapiens mRNA for VPS13D prote... 110 2e-22
AK029649_1(AK029649|pid:none) Mus musculus adult male testis cDN... 109 7e-22
AE013599_447(AE013599|pid:none) Drosophila melanogaster chromoso... 109 7e-22
BC050055_1(BC050055|pid:none) Mus musculus vacuolar protein sort... 107 2e-21
BC062130_1(BC062130|pid:none) Mus musculus vacuolar protein sort... 107 2e-21
AK030931_1(AK030931|pid:none) Mus musculus adult male thymus cDN... 103 4e-20
AK129486_1(AK129486|pid:none) Mus musculus mRNA for mKIAA3021 pr... 103 4e-20
AK123851_1(AK123851|pid:none) Homo sapiens cDNA FLJ41857 fis, cl... 101 2e-19
AJ608770_1(AJ608770|pid:none) Homo sapiens mRNA for VPS13C prote... 101 2e-19
(Q709C8) RecName: Full=Vacuolar protein sorting-associated prote... 101 2e-19
BT026167_1(BT026167|pid:none) Bos taurus vacuolar protein sortin... 100 2e-19
BC163680_1(BC163680|pid:none) Danio rerio vacuolar protein sorti... 100 3e-19
BC069387_1(BC069387|pid:none) Homo sapiens vacuolar protein sort... 94 3e-17
AK000143_1(AK000143|pid:none) Homo sapiens cDNA FLJ20136 fis, cl... 94 3e-17
AE014296_2318(AE014296|pid:none) Drosophila melanogaster chromos... 93 7e-17
CP001160_54(CP001160|pid:none) Thalassiosira pseudonana CCMP1335... 79 1e-12
AC135799_29(AC135799|pid:none) Medicago truncatula clone mth2-11... 76 9e-12
AF533660_1(AF533660|pid:none) Danio rerio chorein-like protein, ... 75 2e-11
AE014297_4667(AE014297|pid:none) Drosophila melanogaster chromos... 64 3e-08
AY325251_1(AY325251|pid:none) Rattus norvegicus Da1-12 mRNA, com... 60 5e-07
AL590444_68(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 56 9e-06
AY223815_1(AY223815|pid:none) Homo sapiens Cohen syndrome 1 prot... 53 6e-05
FN357714_26(FN357714|pid:none) Schistosoma mansoni genome sequen... 53 6e-05
AB011104_1(AB011104|pid:none) Homo sapiens mRNA for KIAA0532 pro... 53 6e-05
AJ608772_1(AJ608772|pid:none) Homo sapiens mRNA for VPS13B (COH1... 53 6e-05
AP008208_1253(AP008208|pid:none) Oryza sativa (japonica cultivar... 51 3e-04
A96521(A96521) protein F21D18.22 [imported] - Arabidopsis thalia... 49 0.001
CR940347_733(CR940347|pid:none) Theileria annulata strain Ankara... 47 0.003
AP004787_6(AP004787|pid:none) Oryza sativa Japonica Group genomi... 46 0.009
(O94649) RecName: Full=Autophagy-related protein 2; AltName: Ful... 46 0.009
AY084269_1(AY084269|pid:none) Arabidopsis thaliana clone 101790 ... 45 0.021
T15626(T15626)hypothetical protein C25H3.8 - Caenorhabditis eleg... 44 0.028
U29535_9(U29535|pid:none) Caenorhabditis elegans cosmid C25H3, c... 44 0.028
AC159423_12(AC159423|pid:none) Trypanosoma brucei chromosome 8 c... 44 0.028
EU964631_1(EU964631|pid:none) Zea mays clone 280468 unknown mRNA. 42 0.10
CR954215_162(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 42 0.10
AL844509_426(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.40
AM467727_9(AM467727|pid:none) Vitis vinifera contig VV78X011652.... 38 2.0
AJ010592_15(AJ010592|pid:none) Guillardia theta DNA for complete... 37 3.4
AL049190_1(AL049190|pid:none) S.pombe chromosome II cosmid c31E1. 37 3.4
AC034256_17(AC034256|pid:none) Sequence of BAC F7H2 from Arabido... 37 4.4
AM920427_242(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 36 7.5

>(Q55EI3) RecName: Full=Putative vacuolar protein sorting-associated
protein 13E;
Length = 4241

Score = 1083 bits (2800), Expect = 0.0
Identities = 551/583 (94%), Positives = 552/583 (94%)
Frame = +2

Query: 44 YKQPDIHCNPYIRIKTCLXVATILXIISXLKEPPYRILNNTKYQLSIQQKKVGKVLTVEP 223
YKQPDIHCNPYIRIKTCL VATIL IIS LKEPPYRILNNTKYQLSIQQKKVGKVLTVEP
Sbjct: 3062 YKQPDIHCNPYIRIKTCLEVATILVIISELKEPPYRILNNTKYQLSIQQKKVGKVLTVEP 3121

Query: 224 SSSIPYVWDLPLEDHILEVLVHISTNQSEKASYKMDKIKTFRPMEFNDDHNPVVIKAIVE 403
SSSIPYVWDLPLEDHILEVLVHISTNQSEKASYKMDKIKTFRPMEFNDDHNPVVIKAIVE
Sbjct: 3122 SSSIPYVWDLPLEDHILEVLVHISTNQSEKASYKMDKIKTFRPMEFNDDHNPVVIKAIVE 3181

Query: 404 ADESTRVLTLSDKTSFQISKYEEENLRQSFRIHFTGIGISVINANPTELLYVSIHDILCE 583
ADESTRVLTLSDKTSFQISKYEEENLRQSFRIHFTGIGISVINANPTELLYVSIHDILCE
Sbjct: 3182 ADESTRVLTLSDKTSFQISKYEEENLRQSFRIHFTGIGISVINANPTELLYVSIHDILCE 3241

Query: 584 YFISSFLQKLEMKITNIQVDNQLSKVTPYSHPVLLFADNLLPNTPFLQVRIVKSMKMKNI 763
YFISSFLQKLEMKITNIQVDNQLSKVTPYSHPVLLFADNLLPNTPFLQVRIV+SMKMKNI
Sbjct: 3242 YFISSFLQKLEMKITNIQVDNQLSKVTPYSHPVLLFADNLLPNTPFLQVRIVRSMKMKNI 3301

Query: 764 DYYHHVSLKMQELNIKVEEKFLYVXXXXXXXXXXXXWTGNKKTNTLHNMDMLTPMYNEDI 943
DYYHHVSLKMQELNIKVEEKFLYV WTGNKKTNTLHNMDMLTPMYNEDI
Sbjct: 3302 DYYHHVSLKMQELNIKVEEKFLYVLLDFFNSLDFSFWTGNKKTNTLHNMDMLTPMYNEDI 3361

Query: 944 GEGFIDEMVARALPSIYGKKMYFESLDIEPISMFLTFDLSNKSGSIASLEQAPMVKAFRR 1123
GEGFIDEMVARALPSIYGKKMYFESLDIEPISMFLTFDLSNKSGSIASLEQAPMVKAFRR
Sbjct: 3362 GEGFIDEMVARALPSIYGKKMYFESLDIEPISMFLTFDLSNKSGSIASLEQAPMVKAFRR 3421

Query: 1124 IGFVIVSFQHAHIFLHGFSLSHAFGSNEELLAPIFNHYFSEGLSEVYKILGAFNLFGNPV 1303
IGFVIVSFQHAHIFLHGFSLSHAFGSNEELLAPIFNHYFSEGLSEVYKILGAFNLFGNPV
Sbjct: 3422 IGFVIVSFQHAHIFLHGFSLSHAFGSNEELLAPIFNHYFSEGLSEVYKILGAFNLFGNPV 3481

Query: 1304 GLVTNFGIGFKEFFVSMGKGLVGNSFTDSFGQGSKSLAKHSVYGIFDSGAKLTGSAGKVL 1483
GLVTNFGIGFKEFFVSMGKGLVGNSFTDSFGQGSKSLAKHSVYGIFDSGAKLTGSAGKVL
Sbjct: 3482 GLVTNFGIGFKEFFVSMGKGLVGNSFTDSFGQGSKSLAKHSVYGIFDSGAKLTGSAGKVL 3541

Query: 1484 STLSMDQRYILERQYIIGESPNTFMQGLILGGRAAKTAVYRGFSGFVKLPYEGGKEXXXX 1663
STLSMDQRYILERQYIIGESPNTFMQGLILGGRAAKTAVYRGFSGFVKLPYEGGKE
Sbjct: 3542 STLSMDQRYILERQYIIGESPNTFMQGLILGGRAAKTAVYRGFSGFVKLPYEGGKEAGPK 3601

Query: 1664 XXXXXXXXXXXXLVLKPIAAGFDFASKVSEGIKNSTQLSIERK 1792
LVLKPIAAGFDFASKVSEGIKNSTQLSIERK
Sbjct: 3602 GVVKGIGKGTAGLVLKPIAAGFDFASKVSEGIKNSTQLSIERK 3644

Score = 201 bits (511), Expect(2) = 2e-78
Identities = 110/152 (72%), Positives = 110/152 (72%)
Frame = +3

Query: 2550 QRQLQHQFSSNSIIETPRYKSMARXXXXXXXXXXXXXXSNNRLSLTPSGSGNINYSDKFE 2729
QRQLQHQFSSNSIIETPRYKSMAR SNNRLSLTPSGSGNINYSDKFE
Sbjct: 4090 QRQLQHQFSSNSIIETPRYKSMARQQQFQQPPPPPPLPSNNRLSLTPSGSGNINYSDKFE 4149

Query: 2730 VALNTXXXXXXXXXXXXXXXXKNQRDLQKLLFQQQSTEFDTLRXXXXXXXXXXXXYHPLS 2909
VALNT KNQRDLQKLLFQQQSTEFDTLR YHPLS
Sbjct: 4150 VALNTIIQIQKIQSQQMSSLQKNQRDLQKLLFQQQSTEFDTLRNQQEQIQNIISQYHPLS 4209

Query: 2910 PSKASLVSKLSNELESTNSNVVISPPTGGASN 3005
PSKASLVSKLSNELESTNSNVVISPPTGGASN
Sbjct: 4210 PSKASLVSKLSNELESTNSNVVISPPTGGASN 4241

Score = 118 bits (295), Expect(2) = 2e-78
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +2

Query: 2312 ISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSGA 2479
ISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSGA
Sbjct: 4011 ISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSGA 4066

Score = 179 bits (455), Expect = 4e-43
Identities = 96/141 (68%), Positives = 96/141 (68%)
Frame = +3

Query: 1812 ISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSGAXXXX 1991
ISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSGA
Sbjct: 4011 ISKAIHTPSASSLKKLKTPHHYNVRFEPSSSLGPQDFDIHTIRLQNQQYQHSGSGAPPPP 4070

Query: 1992 XXXXXXXXXXXXXXXXXXXQRQLQHQFSSNSIIETPRYKSMAXXXXXXXXXXXXXXXXXX 2171
QRQLQHQFSSNSIIETPRYKSMA
Sbjct: 4071 PIITTTTNSTIPPPSSNINQRQLQHQFSSNSIIETPRYKSMARQQQFQQPPPPPPLPSNN 4130

Query: 2172 XXXXTPSGSGNINYSDKFEVA 2234
TPSGSGNINYSDKFEVA
Sbjct: 4131 RLSLTPSGSGNINYSDKFEVA 4151

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 4,159,510,356
Number of extensions: 76682948
Number of successful extensions: 192474
Number of sequences better than 10.0: 74
Number of HSP's gapped: 191880
Number of HSP's successfully gapped: 98
Length of query: 1024
Length of database: 1,051,180,864
Length adjustment: 139
Effective length of query: 885
Effective length of database: 601,299,163
Effective search space: 532149759255
Effective search space used: 532149759255
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.49 alm: 0.32 top: 0.53 tms: 0.00 mit: 0.16 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: cytoplasmic
28.0 %: nuclear
8.0 %: mitochondrial
8.0 %: vesicles of secretory system

>> prediction for Contig-U15773-1 is cyt

VS (DIR, S) 0
VH (FL, L) 2
VF (FL, S) 0
AH (FL, L) 2
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 1
CH (FL, L) 4
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0