Contig-U15766-1
Contig ID Contig-U15766-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Contig-U15766-1Q.Seq.d
ATATTTATTATTTATTTTATAAATTTTTACAAAAAAAACATATAAAAAAA
AAAAAACCCTTATAAATATATTTTTTATTCTTTTTTTTTTTTTTNTTTCC
CCAAACCAAAAACCAAAAACCAAAAAAAAAA----------AAAAAAAAA
AATTAATTATTATTAACCAAAAAAAAAAAACATGGAAAATTTAGAAAATA
AAGAATCAATTGAAATTATAACTAAAGAAACATTAGAAATTAATATTAAT
AAAAATAATGAAAATGAAGAATTAAAAAAAGAATTAAATGAACAATTTAA
ATTATCATATGAACAAGAATCATATTTAAAACAACAATTATTAAAATATT
CAGTACAAGATGAGGTTAAAATTTATTTTAGCAATTCACAAAATGTAACT
GAAACATTATTTTTAAAATTTTTATTTGGACAATTAACATCGATTCCTTT
GTTGACATCAAAGCAACAAGCAAAGATTAGATTTCAACAATTGATTGATA
GATTACCACATATTATAATTCAATCACAAATTGCCACCAAACAAGAGACC
AATGACCAATTTAGAAAGTTTGTGGTGAAATGTTTTGATATTGCATTAAG
AACACCACAGGAGAAGCAAAAAGATAAAACATTAAAGGTGTAAAAAAAAA
AATTAATTATTATTAACCAAAAAAAAAAAACATGGAAAATTTAGAAAATA
AAGAATCAATTGAAATTATAACTAAAGAAACATTAGAAATTAATATTAAT
AAAAATAATGAAAATGAAGAATTAAAAAAAGAATTAAATGAACAATTTAA
ATTATCATATGAACAAGAATCATATTTAAAACAACAATTATTAAAATATT
CAGTACAAGATGAGGTTAAAATTTATTTTAGCAATTCACAAAATGTAACT
GAAACATTATTTTTAAAATTTTTATTTGGACAATTAACATCGATTCCTTT
GTTGACATCAAAGCAACAAGCAAAGATTAGATTTCAACAATTGATTGATA
GATTACCACATATTATAATTCAATCACAAATTGCCACCAAACAAGAGACC
AATGACCAATTTAGAAAGTTTGTGGTGAAATGTTTTGATATTGCATTAAG
AACACCACAGGAGAAGCAAAAAGATAAAACATTAAAGGTGTTCAAAGACT
ATAATAAAGAGGAATGGGAGCGTTTGCAAAAGTATAAACCAGATAAAATT
GTAAAGTTGAAACAACAAGACACCCTAGAGGATATTGAAGATGAGAAGGA
GGAAGAGAAAAGAAAGAACAATATCTACGATGTCGAGCGTGATGAAACCA
TCGTTAGATTACAACGTCGTCTAACAGAGGTGACTCAGGTGATCGTCATG
AACATTGAGGAGCGTAATAAGGAGGGTGGCTCATCGACCAATGGTATTGG
CTATTTGTTTGGTACAATACTTCAAACAAAGAATGTCAAGGATTTGCCAC
CGGATCTATCAGAGTTTATACAGATTATGATTAAGATTCTATCACTTTGG
ATGGAGAGAGAGATGAGGGACCCAAAACAAGTCACCAAATTAAAACGTCT
ATACATGATAACCCCAATCACTGCGATCAAAGCATCCCTCAATATCGCCA
ATCCAGTTACACTCTTGAAAGGTATGATTTTAATGTTTTTAGCCAAACCA
TTTGGTGCAAGAAATTTAATGCAAACCATTTGTTCCGTAATGGTTGAGGC
GGCAAAAACTGAACGTACCGCAAAGAAAGCTCATAAAAAGGCCGAACAAG
ATTTATCCGATTTAAAACATGCCGTACGTAAACAAGTTTTAGCAAAAATT
AAAGGATTCGCTTACAATTCTCATCATGTTTCCGATGCCGCTGGTTCACC
CATTTTACAATTCAAAGAGATTCCATCGGCAATTTCAATACTTCAATATC
AATGGCCAGGTTCTCCATCATTGGATGCTTCAATCTTACAACAATTGAAT
GAAGAACAATTTAAATCACTCTTTGAGTATGCAAAATTAGAGAAAAGAAA
AAAGGAGAAAGAAGATTTCGTTGAAATACTTGGTAATGAAGAGATGATTG
AAATCATTCGTGAACTCTTACCAGTACTCTATGAACCATTGGGTAAATTA
TTTTGTAAGGCTAATATTGGTAATCACTTTGAACGTTTAGCAAGAGTCAT
TAAAAAATTAATTGTTGCAGCTGAAACTGGTAATTTAGTTGGTGAAGATG
AAGTAGATGATTTCGAATTAAGTGGTGATGAAATCACTGATGATCAATTT
GTAAATGGAGGTGGTAGTAATAGTAGTAGTAAATCAAATAGTATTAATAA
TAGTGCTAGTAATAGTTTCAATAATGGTACACCTTCTGATACCTTTGTAA
TACCACCTCAAACTGAAGAAAAAAAAGGTTTACTTTCAAAATCTTTAGGT
TGGTTTAAATCAAAAACTACCTCAACCACCAATACAAATGCCAAGGCTTC
AACTCAACCTTCAACTCCAATTAAAATTGGTATTGAATCAACTAGTCCAA
TAAATGATAGTGGTCATATTGATAGTGGTGAATTCTCAATTGATTCTCCA
TCTGATTCACCAATAATTGTTACTTCAACTACAACCTCAACAACTACTAC
AACTACAACTACTACTCCAACAGTTGTTGTATCACCAAATCCAAAAGAAT
CATCAATGTTTACAAAATTCACAAGTGATATTAGTGATTTTTTAGGTACA
AATACAGATAATCAAAAAGAAAAGAGTAAAAATATTAAAAAGAAATTCAA
AAAAGATAGAAAACAAGCAATTACAATGGCAGAAAGATTAGTACTTTTTG
AAGAGGTTAATACAACTTTAATGGAAAGAATCTATGAATTAATTCATGAA
TTGGTTGTTGCAGATGCAAAGATTCAATTTGATTCACCAGTATTTCATTC
AGCAGATTCATCATCATCAAATCCTGTATCACCAATTCCAAATGGTGAAA
ATAGTGATCAAAAATCAACATCAGAACAACAACCACCACAACAAGAAACA
GAACAAAAAACAGGTTTATTATCTTTATCACTTTGTTGGTTATTAGGTTT
ATTACAATTTTTAAAGGATGAAGAAGTTGATGTTTCAAAACAAATCTTTG
ACCCACTTTCACCAAATTTAAAGAAATTAATTATTGCAGAATTAGATAGT
GTCATACAATATAGAGAATGGAGAATGGAAGTTGGTAATAAAGAAGCAAC
AAAGAAAAATATTGAAAAGGAGAAAAAAATAAAAAAAATAAAAATGATAA
AAAAGATTCTGAACCAGAACAAAAAGAAAGCGAAAAAGAAAAAGATAACA
AAGAAGAACAAGAAGAAGAAGAAGAAGAATTTGATTTAGAAAAGGAAAAG
AAAGAAAAGAGACCAGTTTTAGAATATCTTCCAACTTTAGTTGGTCCATT
TTTATCATTAATAAGTGAACGTTTGGGTCGTTTAGGTGATCCTTCAAAAT
ATTCTCTTAGAAATATCTCAACTGATATTGGTGAAATTAAATTGGACGAT
CCTGATACCATAAAAACAAATTAATATTTAAATAAATAAAAAAAAATAAT
AAAAAAAAAATAATAAAAAAAAAAATATAAAAAATAAAAATA

Gap gap included
Contig length 3582
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 1163568
End point 1160592
Strand (PLUS/MINUS) MINUS
Number of clones 41
Number of EST 61
Link to clone list U15766
List of clone(s)

est1=SHE639F,-9,131
est2=CFC119F,1,131
est3=AHH202F,7,130
est4=AHR417F,7,130
est5=CHI666F,7,130
est6=CHR638F,7,131
est7=SHF616F,7,131
est8=CHG860F,9,130
est9=CHS165F,14,130
est10=SHJ204F,14,131
est11=CFC119X,132,1131
est12=CHQ445F,677,1168
est13=CHJ334F,697,1315
est14=CHJ225F,735,1358
est15=SHC745Z,746,1381
est16=CHF152F,831,1391
est17=AHH347F,863,1497
est18=AFI126F,877,1251
est19=SHL410F,933,1501
est20=CFF284F,1180,1762
est21=CFC119Z,1269,1963
est22=CHI256F,1537,2072
est23=SFB856F,1791,2358
est24=VFH817F,1924,2516
est25=CHH492Z,1944,2737
est26=VHL860Z,1949,2492
est27=AHH202Z,1958,2696
est28=CFG135Z,2015,2733
est29=CHG860Z,2026,2697
est30=SSH341F,2101,2426
est31=AFI126Z,2103,2743
est32=AHO646Z,2192,2815
est33=CHI666Z,2417,3159
est34=CHS165Z,2423,3160
est35=CHM867Z,2449,3211
est36=AHB851Z,2451,3142
est37=CHO190Z,2468,3159
est38=SHL772Z,2483,3107
est39=CFF284Z,2511,3249
est40=SLJ704E,2517,2704
est41=AHH347Z,2543,3210
est42=CHF152Z,2544,3208
est43=AHR463Z,2582,3170
est44=CHJ748Z,2582,3111
est45=VFH817Z,2584,3285
est46=AHR417Z,2585,3280
est47=CHF277Z,2586,3159
est48=SHF616Z,2600,3250
est49=SHF833Z,2600,3077
est50=CHJ115Z,2601,3081
est51=CHQ445Z,2602,3192
est52=SLB193E,2602,3584
est53=CHQ354Z,2603,3195
est54=CHJ225Z,2607,2970
est55=CHR638Z,2772,2951
est56=SHE639Z,2811,3405
est57=SHE565Z,2862,3473
est58=SHC745F,2981,3525
est59=SHL410Z,2981,3539
est60=SSH341Z,2994,3421
est61=SHC376Z,3168,3302
Translated Amino Acid sequence
yllfil*IFTKKTYKKKKTLINIFFILFFFFXSPNQKPKTKKK---

---KKKLIIINQKKKTWKI*kiknqlkl*lkkh*klilikimkmkn*kkn*mnnlnyhmn
knhi*nnny*niqykmrlkfilaihkm*lkhyf*nfyldn*hrflc*hqsnkqrldfnn*
lidyhil*fnhklppnkrpmtnleslw*nvlilh*ehhrrskkikh*rckkkn*llltkk
kkhgkfrk*rin*nyn*rnirn*y**k**k*rikkrik*ti*iii*triifkttiikifs
tr*g*nlf*qftkcn*niifkifiwtinidsfvdikatskd*istid**ittyynsitnc
hqtrdq*pi*kvcgemf*yciknttgeakr*nikgvqrl**rgmgafakv*tr*nckvet
trhprgy*r*eggrekkeqylrcra**nhr*ittssnrgdsgdrheh*ga**ggwlidqw
ywlfvwyntsnkecqgfatgsirvytdyd*dsitldgerdegpktshqiktsihdnpnhc
dqsipqyrqssytlerydfnvfsqtiwckkfnanhlfrng*ggkn*tyrkess*kgrtrf
irfktcrt*tsfskn*rirlqfsscfrcrwfthftiqrdsignfntsismarfsiigcfn
lttie*rti*itl*vckirekkkgerrfr*ntw**rdd*nhs*tltstl*tig*iil*g*
yw*sl*tfsksh*kinccs*nw*fsw*r*sr*frikw**nh**sickwrw******ik*y
***c***fq*wytf*ylcnttsn*rkkrftfkifrlv*iknylnhqykcqgfnstfnsn*
nwy*in*snk**wsy**w*iln*fsi*ftnncyfnynlnnyynynyysnsccitkskrii
nvykihk*y**ffrykyr*skrke*ky*keiqkr*ktsnyngrkistf*rg*ynfngknl
*ins*igccrckdsi*ftsisfsrfiiikscitnskw*k**skinirttttttrnrtknr
fiifitllvirfitifkg*rs*cfktnl*ptftkfkeinycrir*chti*rmengsw**r
snkeky*kgeknkknkndkkdsepeqkesekekdnkeeqeeeeeefdlekekkekrpvle
ylptlvgpflsliserlgrlgdpskyslrnistdigeiklddpdtiktn*ylnk*kkiik
kk**kkkykk*k


Translated Amino Acid sequence (All Frames)
Frame A:
ifiiyfinfykkni*kkknpykyifysffffxfpkpktknqkk---

---kkkn*llltkkkkhgkfrk*rin*nyn*rnirn*y**k**k*rikkrik*ti*iii*
triifkttiikifstr*g*nlf*qftkcn*niifkifiwtinidsfvdikatskd*isti
d**ittyynsitnchqtrdq*pi*kvcgemf*yciknttgeakr*nikgvkkkinyy*pk
kknmenlenkesieiitketleininknneneelkkelneqfklsyeqesylkqqllkys
vqdevkiyfsnsqnvtetlflkflfgqltsiplltskqqakirfqqlidrlphiiiqsqi
atkqetndqfrkfvvkcfdialrtpqekqkdktlkvfkdynkeewerlqkykpdkivklk
qqdtlediedekeeekrknniydverdetivrlqrrltevtqvivmnieernkeggsstn
gigylfgtilqtknvkdlppdlsefiqimikilslwmeremrdpkqvtklkrlymitpit
aikaslnianpvtllkgmilmflakpfgarnlmqticsvmveaaktertakkahkkaeqd
lsdlkhavrkqvlakikgfaynshhvsdaagspilqfkeipsaisilqyqwpgspsldas
ilqqlneeqfkslfeyaklekrkkekedfveilgneemieiirellpvlyeplgklfcka
nignhferlarvikklivaaetgnlvgedevddfelsgdeitddqfvngggsnsssksns
innsasnsfnngtpsdtfvippqteekkgllskslgwfkskttsttntnakastqpstpi
kigiestspindsghidsgefsidspsdspiivtstttstttttttttptvvvspnpkes
smftkftsdisdflgtntdnqkeksknikkkfkkdrkqaitmaerlvlfeevnttlmeri
yelihelvvadakiqfdspvfhsadssssnpvspipngensdqkstseqqppqqeteqkt
gllslslcwllgllqflkdeevdvskqifdplspnlkkliiaeldsviqyrewrmevgnk
eatkkniekekkikkikmikkilnqnkkkakkkkitkknkkkkkknli*krkrkkrdqf*
nifql*lvhfyh**vnvwvv*vilqnilleisqlilvklnwtilip*kqini*inkkk**
kknnkkkniknkn

Frame B:
yllfil*IFTKKTYKKKKTLINIFFILFFFFXSPNQKPKTKKK---

---kkkinyy*pkkknmenlenkesieiitketleininknneneelkkelneqfklsye
qesylkqqllkysvqdevkiyfsnsqnvtetlflkflfgqltsiplltskqqakirfqql
idrlphiiiqsqiatkqetndqfrkfvvkcfdialrtpqekqkdktlkv*KKKLIIINQK
KKTWKI*kiknqlkl*lkkh*klilikimkmkn*kkn*mnnlnyhmnknhi*nnny*niq
ykmrlkfilaihkm*lkhyf*nfyldn*hrflc*hqsnkqrldfnn*lidyhil*fnhkl
ppnkrpmtnleslw*nvlilh*ehhrrskkikh*rcsktiikrngsvcksinqikl*s*n
nktp*rilkmrrrkrkertistmssvmkpsldynvv*qr*lr*ss*tlrsvirrvahrpm
vlaiclvqyfkqrmsrichriyqslyrl*lrfyhfgwrer*gtqnkspn*nvyt**pqsl
rskhpsispiqlhs*kv*f*cf*pnhlvqei*ckpfvp*wlrrqklnvpqrklikrpnki
ypi*nmpyvnkf*qklkdsltilimfpmplvhpfynskrfhrqfqyfningqvlhhwmlq
synn*mknnlnhslsmqn*rkekrrkkislkylvmkr*lksfvnsyqysmnhwvnyfvrl
ilvitlnv*qeslkn*llqlklvi*lvkmk*misn*vvmkslminl*mevvvivvvnqiv
liivlvivsimvhllipl*yhlklkkkkvyfqnl*vglnqklpqppiqmprlqlnlqlql
klvlnqlvq*mivvilivvnsqlilhlihq*lllqlqpqqllqlqlllqqllyhqiqknh
qclqnsqvilvif*vqiqiikkkrvkilkrnskkienkqlqwqkd*yflkrliql*wkes
mn*fmnwllqmqrfnlihqyfiqqihhhqilyhqfqmvkiviknqhqnnnhhnkkqnkkq
vyylyhfvgy*vyynf*rmkklmfqnkslthfhqi*rn*llqn*ivsyniengewklvik
kqqrkilkrrkk*kk*k**krf*trtkrkrkrkr*qrrtrrrrrri*frkgkerketsfr
issnfswsifiink*tfgsfr*sfkifs*kyln*yw*n*igrs*yhknklifk*ikknnk
kkiikkki*kiki

Frame C:
iyylfykflqkkhikkkkpl*iyflfffffxfpqtknqkpkkk---

---KKKLIIINQKKKTWKI*kiknqlkl*lkkh*klilikimkmkn*kkn*mnnlnyhmn
knhi*nnny*niqykmrlkfilaihkm*lkhyf*nfyldn*hrflc*hqsnkqrldfnn*
lidyhil*fnhklppnkrpmtnleslw*nvlilh*ehhrrskkikh*rckkkn*llltkk
kkhgkfrk*rin*nyn*rnirn*y**k**k*rikkrik*ti*iii*triifkttiikifs
tr*g*nlf*qftkcn*niifkifiwtinidsfvdikatskd*istid**ittyynsitnc
hqtrdq*pi*kvcgemf*yciknttgeakr*nikgvqrl**rgmgafakv*tr*nckvet
trhprgy*r*eggrekkeqylrcra**nhr*ittssnrgdsgdrheh*ga**ggwlidqw
ywlfvwyntsnkecqgfatgsirvytdyd*dsitldgerdegpktshqiktsihdnpnhc
dqsipqyrqssytlerydfnvfsqtiwckkfnanhlfrng*ggkn*tyrkess*kgrtrf
irfktcrt*tsfskn*rirlqfsscfrcrwfthftiqrdsignfntsismarfsiigcfn
lttie*rti*itl*vckirekkkgerrfr*ntw**rdd*nhs*tltstl*tig*iil*g*
yw*sl*tfsksh*kinccs*nw*fsw*r*sr*frikw**nh**sickwrw******ik*y
***c***fq*wytf*ylcnttsn*rkkrftfkifrlv*iknylnhqykcqgfnstfnsn*
nwy*in*snk**wsy**w*iln*fsi*ftnncyfnynlnnyynynyysnsccitkskrii
nvykihk*y**ffrykyr*skrke*ky*keiqkr*ktsnyngrkistf*rg*ynfngknl
*ins*igccrckdsi*ftsisfsrfiiikscitnskw*k**skinirttttttrnrtknr
fiifitllvirfitifkg*rs*cfktnl*ptftkfkeinycrir*chti*rmengsw**r
snkeky*kgeknkknkndkkdsepeqkesekekdnkeeqeeeeeefdlekekkekrpvle
ylptlvgpflsliserlgrlgdpskyslrnistdigeiklddpdtiktn*ylnk*kkiik
kk**kkkykk*k

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15766-1 (Contig-U15766-1Q)
/CSM_Contig/Contig-U15766-1Q.Seq.d
(3592 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Conti... 2337 0.0
Contig-U12948-1 (Contig-U12948-1Q) /CSM_Contig/Conti... 607 e-173
Contig-U13031-1 (Contig-U13031-1Q) /CSM_Contig/Conti... 194 7e-49
Contig-U12495-1 (Contig-U12495-1Q) /CSM_Contig/Conti... 54 2e-06
Contig-U15993-1 (Contig-U15993-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U16130-1 (Contig-U16130-1Q) /CSM_Contig/Conti... 42 0.006
Contig-U14562-1 (Contig-U14562-1Q) /CSM_Contig/Conti... 42 0.006
Contig-U11381-1 (Contig-U11381-1Q) /CSM_Contig/Conti... 42 0.006
Contig-U11267-1 (Contig-U11267-1Q) /CSM_Contig/Conti... 42 0.006
Contig-U11235-1 (Contig-U11235-1Q) /CSM_Contig/Conti... 42 0.006

>Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Contig-U15766-1Q.Seq.d
Length = 3592

Score = 2337 bits (1179), Expect = 0.0
Identities = 1179/1179 (100%)
Strand = Plus / Plus


Query: 804 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 863


Query: 864 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 923


Query: 924 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 983


Query: 984 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 1043


Query: 1044 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 1103


Query: 1104 accacaggagaagcaaaaagataaaacattaaaggtgttcaaagactataataaagagga 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 accacaggagaagcaaaaagataaaacattaaaggtgttcaaagactataataaagagga 1163


Query: 1164 atgggagcgtttgcaaaagtataaaccagataaaattgtaaagttgaaacaacaagacac 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 atgggagcgtttgcaaaagtataaaccagataaaattgtaaagttgaaacaacaagacac 1223


Query: 1224 cctagaggatattgaagatgagaaggaggaagagaaaagaaagaacaatatctacgatgt 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 cctagaggatattgaagatgagaaggaggaagagaaaagaaagaacaatatctacgatgt 1283


Query: 1284 cgagcgtgatgaaaccatcgttagattacaacgtcgtctaacagaggtgactcaggtgat 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 cgagcgtgatgaaaccatcgttagattacaacgtcgtctaacagaggtgactcaggtgat 1343


Query: 1344 cgtcatgaacattgaggagcgtaataaggagggtggctcatcgaccaatggtattggcta 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 cgtcatgaacattgaggagcgtaataaggagggtggctcatcgaccaatggtattggcta 1403


Query: 1404 tttgtttggtacaatacttcaaacaaagaatgtcaaggatttgccaccggatctatcaga 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 tttgtttggtacaatacttcaaacaaagaatgtcaaggatttgccaccggatctatcaga 1463


Query: 1464 gtttatacagattatgattaagattctatcactttggatggagagagagatgagggaccc 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 gtttatacagattatgattaagattctatcactttggatggagagagagatgagggaccc 1523


Query: 1524 aaaacaagtcaccaaattaaaacgtctatacatgataaccccaatcactgcgatcaaagc 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 aaaacaagtcaccaaattaaaacgtctatacatgataaccccaatcactgcgatcaaagc 1583


Query: 1584 atccctcaatatcgccaatccagttacactcttgaaaggtatgattttaatgtttttagc 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 atccctcaatatcgccaatccagttacactcttgaaaggtatgattttaatgtttttagc 1643


Query: 1644 caaaccatttggtgcaagaaatttaatgcaaaccatttgttccgtaatggttgaggcggc 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 caaaccatttggtgcaagaaatttaatgcaaaccatttgttccgtaatggttgaggcggc 1703


Query: 1704 aaaaactgaacgtaccgcaaagaaagctcataaaaaggccgaacaagatttatccgattt 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 aaaaactgaacgtaccgcaaagaaagctcataaaaaggccgaacaagatttatccgattt 1763


Query: 1764 aaaacatgccgtacgtaaacaagttttagcaaaaattaaaggattcgcttacaattctca 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 aaaacatgccgtacgtaaacaagttttagcaaaaattaaaggattcgcttacaattctca 1823


Query: 1824 tcatgtttccgatgccgctggttcacccattttacaattcaaagagattccatcggcaat 1883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 tcatgtttccgatgccgctggttcacccattttacaattcaaagagattccatcggcaat 1883


Query: 1884 ttcaatacttcaatatcaatggccaggttctccatcattggatgcttcaatcttacaaca 1943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 ttcaatacttcaatatcaatggccaggttctccatcattggatgcttcaatcttacaaca 1943


Query: 1944 attgaatgaagaacaatttaaatcactctttgagtatgc 1982
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 attgaatgaagaacaatttaaatcactctttgagtatgc 1982


Score = 1053 bits (531), Expect = 0.0
Identities = 547/555 (98%)
Strand = Plus / Plus


Query: 2016 tttcgttgaaatacttggtaatgaagagatgattgaaatcattcgtgaactcttaccagt 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 tttcgttgaaatacttggtaatgaagagatgattgaaatcattcgtgaactcttaccagt 2075


Query: 2076 actctatgaaccattgggtaaattattttgtaaggctaatattggtaatcactttgaacg 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 actctatgaaccattgggtaaattattttgtaaggctaatattggtaatcactttgaacg 2135


Query: 2136 tttagcaagagtcattaaaaaattaattgttgcagctgaaactggtaatttagttggtga 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2136 tttagcaagagtcattaaaaaattaattgttgcagctgaaactggtaatttagttggtga 2195


Query: 2196 agatgaagtagatgatttcgaattaagtggtgatgaaatcactgatgatcaatttgtaaa 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 agatgaagtagatgatttcgaattaagtggtgatgaaatcactgatgatcaatttgtaaa 2255


Query: 2256 tggaggtggtagtaatagtagtagtaaatcaaatagtattaataatagtgctagtaatag 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 tggaggtggtagtaatagtagtagtaaatcaaatagtattaataatagtgctagtaatag 2315


Query: 2316 tttcaataatggtacaccttctgatacctttgtaataccacctcaaactgaagnnnnnnn 2375
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 tttcaataatggtacaccttctgatacctttgtaataccacctcaaactgaagaaaaaaa 2375


Query: 2376 nggtttactttcaaaatctttaggttggtttaaatcaaaaactacctcaaccaccaatac 2435
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2376 aggtttactttcaaaatctttaggttggtttaaatcaaaaactacctcaaccaccaatac 2435


Query: 2436 aaatgccaaggcttcaactcaaccttcaactccaattaaaattggtattgaatcaactag 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2436 aaatgccaaggcttcaactcaaccttcaactccaattaaaattggtattgaatcaactag 2495


Query: 2496 tccaataaatgatagtggtcatattgatagtggtgaattctcaattgattctccatctga 2555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2496 tccaataaatgatagtggtcatattgatagtggtgaattctcaattgattctccatctga 2555


Query: 2556 ttcaccaataattgt 2570
|||||||||||||||
Sbjct: 2556 ttcaccaataattgt 2570


Score = 670 bits (338), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Plus


Query: 304 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 363


Query: 364 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 423


Query: 424 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 483


Query: 484 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 543


Query: 544 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 603


Query: 604 accacaggagaagcaaaaagataaaacattaaaggtgt 641
||||||||||||||||||||||||||||||||||||||
Sbjct: 604 accacaggagaagcaaaaagataaaacattaaaggtgt 641


Score = 670 bits (338), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Plus


Query: 304 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 863


Query: 364 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 923


Query: 424 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 983


Query: 484 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 1043


Query: 544 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 1103


Query: 604 accacaggagaagcaaaaagataaaacattaaaggtgt 641
||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 accacaggagaagcaaaaagataaaacattaaaggtgt 1141


Score = 670 bits (338), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Plus


Query: 804 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 363


Query: 864 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 423


Query: 924 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 483


Query: 984 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 543


Query: 1044 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 603


Query: 1104 accacaggagaagcaaaaagataaaacattaaaggtgt 1141
||||||||||||||||||||||||||||||||||||||
Sbjct: 604 accacaggagaagcaaaaagataaaacattaaaggtgt 641


Score = 416 bits (210), Expect = e-115
Identities = 210/210 (100%)
Strand = Plus / Plus


Query: 3013 ggtttattatctttatcactttgttggttattaggtttattacaatttttaaaggatgaa 3072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3013 ggtttattatctttatcactttgttggttattaggtttattacaatttttaaaggatgaa 3072


Query: 3073 gaagttgatgtttcaaaacaaatctttgacccactttcaccaaatttaaagaaattaatt 3132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3073 gaagttgatgtttcaaaacaaatctttgacccactttcaccaaatttaaagaaattaatt 3132


Query: 3133 attgcagaattagatagtgtcatacaatatagagaatggagaatggaagttggtaataaa 3192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3133 attgcagaattagatagtgtcatacaatatagagaatggagaatggaagttggtaataaa 3192


Query: 3193 gaagcaacaaagaaaaatattgaaaaggag 3222
||||||||||||||||||||||||||||||
Sbjct: 3193 gaagcaacaaagaaaaatattgaaaaggag 3222


Score = 379 bits (191), Expect = e-104
Identities = 191/191 (100%)
Strand = Plus / Plus


Query: 2764 caagcaattacaatggcagaaagattagtactttttgaagaggttaatacaactttaatg 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2764 caagcaattacaatggcagaaagattagtactttttgaagaggttaatacaactttaatg 2823


Query: 2824 gaaagaatctatgaattaattcatgaattggttgttgcagatgcaaagattcaatttgat 2883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2824 gaaagaatctatgaattaattcatgaattggttgttgcagatgcaaagattcaatttgat 2883


Query: 2884 tcaccagtatttcattcagcagattcatcatcatcaaatcctgtatcaccaattccaaat 2943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2884 tcaccagtatttcattcagcagattcatcatcatcaaatcctgtatcaccaattccaaat 2943


Query: 2944 ggtgaaaatag 2954
|||||||||||
Sbjct: 2944 ggtgaaaatag 2954


Score = 291 bits (147), Expect = 4e-78
Identities = 147/147 (100%)
Strand = Plus / Plus


Query: 3363 ccagttttagaatatcttccaactttagttggtccatttttatcattaataagtgaacgt 3422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3363 ccagttttagaatatcttccaactttagttggtccatttttatcattaataagtgaacgt 3422


Query: 3423 ttgggtcgtttaggtgatccttcaaaatattctcttagaaatatctcaactgatattggt 3482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3423 ttgggtcgtttaggtgatccttcaaaatattctcttagaaatatctcaactgatattggt 3482


Query: 3483 gaaattaaattggacgatcctgatacc 3509
|||||||||||||||||||||||||||
Sbjct: 3483 gaaattaaattggacgatcctgatacc 3509


Score = 180 bits (91), Expect = 1e-44
Identities = 91/91 (100%)
Strand = Plus / Plus


Query: 2623 gttgttgtatcaccaaatccaaaagaatcatcaatgtttacaaaattcacaagtgatatt 2682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2623 gttgttgtatcaccaaatccaaaagaatcatcaatgtttacaaaattcacaagtgatatt 2682


Query: 2683 agtgattttttaggtacaaatacagataatc 2713
|||||||||||||||||||||||||||||||
Sbjct: 2683 agtgattttttaggtacaaatacagataatc 2713


Score = 61.9 bits (31), Expect = 6e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 181 catggaaaatttagaaaataaagaatcaatt 211
|||||||||||||||||||||||||||||||
Sbjct: 181 catggaaaatttagaaaataaagaatcaatt 211


Score = 61.9 bits (31), Expect = 6e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 681 catggaaaatttagaaaataaagaatcaatt 711
|||||||||||||||||||||||||||||||
Sbjct: 681 catggaaaatttagaaaataaagaatcaatt 711


Score = 61.9 bits (31), Expect = 6e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 181 catggaaaatttagaaaataaagaatcaatt 211
|||||||||||||||||||||||||||||||
Sbjct: 681 catggaaaatttagaaaataaagaatcaatt 711


Score = 61.9 bits (31), Expect = 6e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 681 catggaaaatttagaaaataaagaatcaatt 711
|||||||||||||||||||||||||||||||
Sbjct: 181 catggaaaatttagaaaataaagaatcaatt 211


Score = 60.0 bits (30), Expect = 3e-08
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 1 atatttattatttattttataaatttttac 30
||||||||||||||||||||||||||||||
Sbjct: 1 atatttattatttattttataaatttttac 30


Score = 48.1 bits (24), Expect = 1e-04
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 57 cccttataaatatattttttattc 80
||||||||||||||||||||||||
Sbjct: 57 cccttataaatatattttttattc 80


>Contig-U12948-1 (Contig-U12948-1Q) /CSM_Contig/Contig-U12948-1Q.Seq.d
Length = 1284

Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus


Query: 304 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 200


Query: 364 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 260


Query: 424 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 320


Query: 484 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 380


Query: 544 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 440


Query: 604 accaca 609
||||||
Sbjct: 441 accaca 446


Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus


Query: 804 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atcatatgaacaagaatcatatttaaaacaacaattattaaaatattcagtacaagatga 200


Query: 864 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggttaaaatttattttagcaattcacaaaatgtaactgaaacattatttttaaaattttt 260


Query: 924 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttggacaattaacatcgattcctttgttgacatcaaagcaacaagcaaagattagatt 320


Query: 984 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaacaattgattgatagattaccacatattataattcaatcacaaattgccaccaaaca 380


Query: 1044 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagaccaatgaccaatttagaaagtttgtggtgaaatgttttgatattgcattaagaac 440


Query: 1104 accaca 1109
||||||
Sbjct: 441 accaca 446


Score = 61.9 bits (31), Expect = 6e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 181 catggaaaatttagaaaataaagaatcaatt 211
|||||||||||||||||||||||||||||||
Sbjct: 18 catggaaaatttagaaaataaagaatcaatt 48


Score = 61.9 bits (31), Expect = 6e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 681 catggaaaatttagaaaataaagaatcaatt 711
|||||||||||||||||||||||||||||||
Sbjct: 18 catggaaaatttagaaaataaagaatcaatt 48


>Contig-U13031-1 (Contig-U13031-1Q) /CSM_Contig/Contig-U13031-1Q.Seq.d
Length = 275

Score = 194 bits (98), Expect = 7e-49
Identities = 100/101 (99%)
Strand = Plus / Plus


Query: 3363 ccagttttagaatatcttccaactttagttggtccatttttatcattaataagtgaacgt 3422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ccagttttagaatatcttccaactttagttggtccatttttatcattaataagtgaacgt 234


Query: 3423 ttgggtcgtttaggtgatccttcaaaatattctcttagaaa 3463
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 235 ttgggtcgtttaggtgatcnttcaaaatattctcttagaaa 275


Score = 159 bits (80), Expect = 4e-38
Identities = 80/80 (100%)
Strand = Plus / Plus


Query: 2623 gttgttgtatcaccaaatccaaaagaatcatcaatgtttacaaaattcacaagtgatatt 2682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 gttgttgtatcaccaaatccaaaagaatcatcaatgtttacaaaattcacaagtgatatt 83


Query: 2683 agtgattttttaggtacaaa 2702
||||||||||||||||||||
Sbjct: 84 agtgattttttaggtacaaa 103


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 76,122
Number of Sequences: 8402
Number of extensions: 76122
Number of successful extensions: 10516
Number of sequences better than 10.0: 497
length of query: 3592
length of database: 8,075,542
effective HSP length: 17
effective length of query: 3575
effective length of database: 7,932,708
effective search space: 28359431100
effective search space used: 28359431100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2.14
Homology vs DNA
Query= Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Contig-U15766-1Q.Seq.d
(3592 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ373849) Dictyostelium discoideum cDNA clone:ddc5e05, 3' e... 1322 0.0 1
(BJ334186) Dictyostelium discoideum cDNA clone:dda45n11, 5' ... 1259 0.0 1
(BJ404706) Dictyostelium discoideum cDNA clone:dds29j11, 3' ... 1235 0.0 1
(BJ358891) Dictyostelium discoideum cDNA clone:ddc11g22, 5' ... 1148 0.0 1
(BJ366782) Dictyostelium discoideum cDNA clone:ddc40a08, 5' ... 1118 0.0 1
(BJ364683) Dictyostelium discoideum cDNA clone:ddc32g13, 5' ... 1112 0.0 1
(BJ380054) Dictyostelium discoideum cDNA clone:ddc36h24, 3' ... 492 0.0 5
(BJ380845) Dictyostelium discoideum cDNA clone:ddc39c18, 3' ... 387 0.0 4
(BJ386510) Dictyostelium discoideum cDNA clone:ddc58a17, 3' ... 387 0.0 4
(BJ366794) Dictyostelium discoideum cDNA clone:ddc40d09, 5' ... 1033 0.0 1
(BJ397364) Dictyostelium discoideum cDNA clone:dds46d04, 5' ... 1031 0.0 1
(BJ383886) Dictyostelium discoideum cDNA clone:ddc47f18, 3' ... 387 0.0 5
(BJ372599) Dictyostelium discoideum cDNA clone:ddc13e09, 3' ... 474 0.0 5
(BJ351913) Dictyostelium discoideum cDNA clone:dda45c02, 3' ... 492 0.0 5
(BJ366361) Dictyostelium discoideum cDNA clone:ddc38o14, 5' ... 864 0.0 2
(BJ372243) Dictyostelium discoideum cDNA clone:ddc11g22, 3' ... 387 0.0 4
(BJ384800) Dictyostelium discoideum cDNA clone:ddc50c23, 3' ... 387 0.0 5
(BJ348845) Dictyostelium discoideum cDNA clone:dda34f14, 3' ... 387 0.0 6
(BJ379665) Dictyostelium discoideum cDNA clone:ddc35h16, 3' ... 444 0.0 5
(BJ385345) Dictyostelium discoideum cDNA clone:ddc54l13, 3' ... 387 0.0 3
(AU060710) Dictyostelium discoideum slug cDNA, clone SLB193. 387 0.0 3
(BJ406421) Dictyostelium discoideum cDNA clone:dds35o04, 3' ... 387 0.0 3
(BJ357879) Dictyostelium discoideum cDNA clone:dda65b06, 3' ... 387 0.0 3
(BJ434140) Dictyostelium discoideum cDNA clone:ddv16b06, 3' ... 387 0.0 3
(BJ387752) Dictyostelium discoideum cDNA clone:dds4p14, 5' e... 492 0.0 3
(BJ343808) Dictyostelium discoideum cDNA clone:dda17c07, 3' ... 385 0.0 4
(BJ413500) Dictyostelium discoideum cDNA clone:ddv16b06, 5' ... 492 0.0 4
(BJ358078) Dictyostelium discoideum cDNA clone:dda65n16, 3' ... 387 0.0 3
(BJ352039) Dictyostelium discoideum cDNA clone:dda45n11, 3' ... 387 0.0 5
(BJ409738) Dictyostelium discoideum cDNA clone:dds42g02, 3' ... 387 0.0 4
(BJ409011) Dictyostelium discoideum cDNA clone:dds47p17, 3' ... 387 0.0 5
(BJ378704) Dictyostelium discoideum cDNA clone:ddc32g13, 3' ... 379 0.0 5
(BJ378794) Dictyostelium discoideum cDNA clone:ddc32i20, 3' ... 387 0.0 3
(BJ385265) Dictyostelium discoideum cDNA clone:ddc54j12, 3' ... 387 0.0 4
(BJ443918) Dictyostelium discoideum cDNA clone:ddv54h16, 3' ... 492 0.0 4
(BJ356466) Dictyostelium discoideum cDNA clone:dda60k12, 3' ... 385 0.0 5
(BJ370509) Dictyostelium discoideum cDNA clone:ddc54j12, 5' ... 741 0.0 1
(BJ381421) Dictyostelium discoideum cDNA clone:ddc41p11, 3' ... 387 0.0 3
(BJ405896) Dictyostelium discoideum cDNA clone:dds33m10, 3' ... 373 0.0 3
(BJ326620) Dictyostelium discoideum cDNA clone:dda17c07, 5' ... 670 0.0 1
(BJ405914) Dictyostelium discoideum cDNA clone:dds33a17, 3' ... 337 0.0 3
(BJ381048) Dictyostelium discoideum cDNA clone:ddc40m03, 3' ... 387 0.0 3
(BJ406437) Dictyostelium discoideum cDNA clone:dds35b10, 3' ... 387 e-180 3
(BJ392907) Dictyostelium discoideum cDNA clone:dds29j11, 5' ... 373 e-177 2
(AU033583) Dictyostelium discoideum slug cDNA, clone SLB193. 373 e-177 2
(BJ408499) Dictyostelium discoideum cDNA clone:dds46d04, 3' ... 373 e-169 3
(BJ400872) Dictyostelium discoideum cDNA clone:dds15m04, 3' ... 605 e-168 1
(BJ381065) Dictyostelium discoideum cDNA clone:ddc40a08, 3' ... 387 e-148 2
(BJ409483) Dictyostelium discoideum cDNA clone:dds42c12, 3' ... 387 e-118 2
(BJ381077) Dictyostelium discoideum cDNA clone:ddc40d09, 3' ... 196 1e-84 2
(AU073484) Dictyostelium discoideum slug cDNA, clone SSH341. 303 3e-84 2
(AU038155) Dictyostelium discoideum slug cDNA, clone SSH341. 285 6e-72 1
(BJ386179) Dictyostelium discoideum cDNA clone:ddc57k10, 3' ... 153 3e-62 3
(AU053797) Dictyostelium discoideum slug cDNA, clone SLJ704. 180 9e-59 2
(BJ393999) Dictyostelium discoideum cDNA clone:dds33m10, 5' ... 48 2e-07 2
(BJ339345) Dictyostelium discoideum cDNA clone:dda65b06, 5' ... 48 3e-06 2
(BJ366586) Dictyostelium discoideum cDNA clone:ddc39c18, 5' ... 48 1e-05 2
(CU818050) A BAC library has been constructed from PN40024 g... 50 5e-04 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 42 5e-04 11
(BJ394454) Dictyostelium discoideum cDNA clone:dds35o04, 5' ... 48 6e-04 2
(BJ360230) Dictyostelium discoideum cDNA clone:ddc5e05, 5' e... 60 6e-04 1
(AC143503) Macaca mulatta clone CH250-267D10, *** SEQUENCING... 46 0.002 2
(ET077791) QM0AAB5CH03FM1 CCER1 Citrus clementina genomic cl... 42 0.002 2
(AX347340) Sequence 2411 from Patent WO0200928. 38 0.003 6
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 38 0.004 18
(FK887805) EST_crog_evm_852911 crog_evm Caligus rogercressey... 40 0.008 2
(FE029221) C0009265D18.P1KAM13F KN511 Ovis aries rectum and ... 44 0.009 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 40 0.011 16
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 0.012 14
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 0.026 16
(DX493930) Cpl35797 Papaya Genomic DNA BAC Library Carica pa... 38 0.027 4
(EL561533) EST_otsh_rgd_3973 otshrgd mixed_tissue Oncorhynch... 40 0.031 2
(CE716411) tigr-gss-dog-17000369525699 Dog Library Canis lup... 40 0.032 2
(AC139682) Homo sapiens chromosome 15 clone RP11-1143M21 map... 42 0.036 5
(CS468880) Sequence 71 from Patent EP1748080. 34 0.046 11
(CS419357) Sequence 71 from Patent WO2006094836. 34 0.046 11
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.049 16
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 36 0.050 17
(AC091269) Homo sapiens chromosome 15 clone RP11-90J19 map 1... 40 0.057 5
(CE299219) tigr-gss-dog-17000359979029 Dog Library Canis lup... 42 0.073 2
(AC192217) Pan troglodytes BAC clone CH251-1H14 from chromos... 40 0.090 2
(AC188685) Pan troglodytes BAC clone CH251-640D14 from chrom... 40 0.090 2
(AC113567) Canis lupus familiaris clone RP81-265M12, WORKING... 38 0.090 2
(AC114327) Canis lupus familiaris clone RP81-158C13, WORKING... 38 0.091 2
(CL139092) ISB1-111O22_T7.1 ISB1 Xenopus (Silurana) tropical... 40 0.092 3
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 36 0.092 15
(AF538053) Monosiga brevicollis mitochondrion, complete genome. 34 0.10 12
(EJ982583) 1093022164217 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.11 2
(CE161824) tigr-gss-dog-17000371432049 Dog Library Canis lup... 38 0.12 2
(AM470992) Vitis vinifera contig VV78X004257.9, whole genome... 38 0.13 6
(GE804846) EST_scau_evk_894982 scauevk mixed_tissue Sebastes... 52 0.15 1
(DD392009) Method and nucleic acids for the improved treatme... 36 0.16 6
(CQ807265) Sequence 715 from Patent WO2004035803. 36 0.16 6
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 32 0.16 12
(AC116100) Dictyostelium discoideum chromosome 2 map 6163571... 36 0.17 9
(AX458482) Sequence 28 from Patent WO0246454. 36 0.21 9
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 34 0.21 17
(DX029921) KBrB026E11R KBrB, Brassica rapa BamHI BAC library... 34 0.24 3
(Z97348) Plasmodium falciparum MAL3P1. 38 0.24 9
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 38 0.25 2
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 34 0.26 10
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 40 0.27 15
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 0.29 16
(AP004862) Oryza sativa Japonica Group genomic DNA, chromoso... 44 0.31 8
(CP000369) Drosophila melanogaster genomic scaffold 21100002... 38 0.32 2
(AC100870) Homo sapiens chromosome 8, clone RP11-758H6, comp... 38 0.33 2
(AM464643) Vitis vinifera contig VV78X185663.3, whole genome... 32 0.34 5
(DX560276) GH_MBb0086F19r GH_MBb Gossypium hirsutum genomic ... 36 0.35 3
(AC009913) Drosophila melanogaster strain y chromosome 2 clo... 38 0.35 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 34 0.37 16
(BD428871) Method and nucleic acids for pharmacogenomic meth... 38 0.38 2
(AX348350) Sequence 45 from Patent WO0202806. 38 0.38 2
(BP477595) Rattus norvegicus mRNA, clone:RBC14917, 3' end, e... 38 0.38 2
(CE137549) tigr-gss-dog-17000371208139 Dog Library Canis lup... 44 0.40 2
(AC219199) Homo sapiens chromosome 15 clone ABC11-49393400N1... 42 0.40 3
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 0.41 16
(CL118721) ISB1-72J8_T7.1 ISB1 Xenopus (Silurana) tropicalis... 34 0.42 2
(CP000979) Borrelia duttonii Ly plasmid pl165, complete sequ... 34 0.43 14
(DD010735) Diagnosis of known genetic Parameters within the ... 38 0.43 16
(AC225482) Medicago truncatula clone mth2-25d10, WORKING DRA... 36 0.44 10
(AM467880) Vitis vinifera, whole genome shotgun sequence, co... 42 0.44 5
(AC225601) Homo sapiens chromosome UNKNOWN clone ABC11-47151... 42 0.44 3
(AM485289) Vitis vinifera contig VV78X115863.7, whole genome... 42 0.48 4
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 34 0.50 13
(DD391735) Method and nucleic acids for the improved treatme... 36 0.50 6
(CQ806991) Sequence 441 from Patent WO2004035803. 36 0.50 6
(AY160106) Dictyostelium discoideum nucleotide exchange fact... 36 0.57 6
(AX346923) Sequence 1994 from Patent WO0200928. 38 0.57 6
(DV747277) ID0AAG9AF08CM1 ID0AAG Acyrthosiphon pisum cDNA cl... 36 0.58 3
(CE021430) tigr-gss-dog-17000322066103 Dog Library Canis lup... 36 0.59 3
(BX897716) Zebrafish DNA sequence from clone DKEY-177F24 in ... 50 0.59 1
(AC189332) Brassica rapa subsp. pekinensis clone KBrB038E05,... 50 0.59 1
(AC160770) Bos taurus clone CH240-96P15, WORKING DRAFT SEQUE... 50 0.59 1
(AC153176) Bos taurus clone CH240-30P2, WORKING DRAFT SEQUEN... 50 0.59 1
(EJ535365) 1092955256403 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.59 1
(EJ518775) 1092955119750 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.59 1
(AL245786) Tetraodon nigroviridis genome survey sequence PUC... 50 0.59 1
(AL237253) Tetraodon nigroviridis genome survey sequence PUC... 50 0.59 1
(CE544253) tigr-gss-dog-17000366082497 Dog Library Canis lup... 50 0.59 1
(AM473981) Vitis vinifera contig VV78X189459.3, whole genome... 40 0.62 6
(AC138747) Homo sapiens chromosome 15, clone RP11-147B8, com... 42 0.62 7
(AC019404) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 0.63 3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 34 0.65 18
(AM485249) Vitis vinifera contig VV78X082782.8, whole genome... 40 0.79 2
(AC132916) Homo sapiens chromosome 8 clone RP11-139P12 map 8... 42 0.84 6
(AC018786) Homo sapiens clone RP11-22B18, LOW-PASS SEQUENCE ... 46 0.85 6
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 0.91 14
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881... 36 0.92 7
(CP000001) Bacillus cereus E33L, complete genome. 38 0.97 2
(AM445940) Vitis vinifera contig VV78X078961.5, whole genome... 38 0.98 4
(FH022839) CHO_OF3241xm22f1.ab1 CHO_OF3 Nicotiana tabacum ge... 42 1.1 2
(FB571360) Sequence 227 from Patent EP1865317. 32 1.1 15
(AX458558) Sequence 104 from Patent WO0246454. 34 1.1 6
(AC126237) Canis lupus familiaris clone RP81-414O22, WORKING... 36 1.2 2
(AC000117) Homo sapiens BAC clone CTB-62A19 from 7, complete... 36 1.2 2
(CU481876) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.3 8
(AF268058) Candidatus Carsonella ruddii natural-host Cacopsy... 36 1.3 5
(BD428844) Method and nucleic acids for pharmacogenomic meth... 42 1.4 5
(AX348323) Sequence 18 from Patent WO0202806. 42 1.4 5
(AX345121) Sequence 192 from Patent WO0200928. 42 1.4 5
(AC203624) Homo sapiens FOSMID clone ABC10-44088100H17 from ... 44 1.4 3
(AC209272) Populus trichocarpa clone POP059-A05, complete se... 36 1.4 11
(AC215375) Solanum lycopersicum chromosome 2 clone C02HBa007... 40 1.5 8
(CP000361) Arcobacter butzleri RM4018, complete genome. 40 1.6 19
(AL138646) Arabidopsis thaliana DNA chromosome 3, BAC clone ... 40 1.6 5
(AM608646) Entamoeba invadens IP1 GSS, clone inv090h03.q1k. 34 1.6 2
(AG566974) Mus musculus molossinus DNA, clone:MSMg01-488D01.... 38 1.6 2
(CE094902) tigr-gss-dog-17000359893277 Dog Library Canis lup... 34 1.6 2
(BZ387555) EINCO19TR EI_10_12_KB Entamoeba invadens genomic ... 34 1.6 2
(BJ328430) Dictyostelium discoideum cDNA clone:dda28l01, 5' ... 34 1.6 2
(CE358618) tigr-gss-dog-17000361449044 Dog Library Canis lup... 34 1.6 2
(BJ416164) Dictyostelium discoideum cDNA clone:ddv25l06, 5' ... 34 1.6 2
(CD770504) AGENCOURT_14739021 NIH_MGC_190 Mus musculus cDNA ... 34 1.6 2
(CE249704) tigr-gss-dog-17000335857509 Dog Library Canis lup... 34 1.6 2
(CD750379) rv10e10.y1 Heterodera schachtii J2 pAMP1 v1 Heter... 34 1.6 2
(CE853785) tigr-gss-dog-17000337107293 Dog Library Canis lup... 34 1.6 2
(BJ389467) Dictyostelium discoideum cDNA clone:dds18j19, 5' ... 34 1.6 2
(CZ095808) OM__Ba0101D10.f OM__Ba Oryza minuta genomic clone... 38 1.6 2
(AC135320) Medicago truncatula clone mth2-28e9, complete seq... 34 1.7 9
(AF036695) Caenorhabditis elegans cosmid F16B3, complete seq... 38 1.7 7
(ER812804) PPTI376TF Solanum tuberosum RHPOTKEY BAC ends Sol... 38 1.7 3
(FI057025) CHO_OF6605xp05f1.ab1 CHO_OF6 Nicotiana tabacum ge... 38 1.8 2
(EJ287959) 1095370001324 Global-Ocean-Sampling_GS-27-01-01-1... 42 1.9 2
(ED785734) GM_WBb0166P07.f GM_WBb Glycine max genomic clone ... 38 1.9 2
(AC125478) Medicago truncatula clone mth2-31i19, complete se... 48 1.9 9
(AM480881) Vitis vinifera contig VV78X243408.2, whole genome... 34 1.9 4
(AC171618) Medicago truncatula clone mth2-144n17, complete s... 34 1.9 12
(BZ034640) oei08a04.b1 B.oleracea002 Brassica oleracea genom... 40 2.0 3
(AC166249) Mus musculus 10 BAC RP23-411N5 (Roswell Park Canc... 36 2.0 11
(AL355611) Human DNA sequence from clone RP11-430K22 on chro... 38 2.0 11
(AC189252) Brassica rapa subsp. pekinensis clone KBrB019M05,... 36 2.0 13
(FK709813) Red04A06M13F Red male Aedes aegypti cDNA, mRNA se... 38 2.0 3
(AF160864) Tetrahymena pyriformis mitochondrial DNA, complet... 32 2.1 10
(AM448446) Vitis vinifera contig VV78X127871.6, whole genome... 40 2.1 2
(EK338959) 1095467053123 Global-Ocean-Sampling_GS-31-01-01-1... 38 2.1 2
(EK349954) 1095467862513 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.2 2
(AC161899) Bos taurus clone CH240-112D22, WORKING DRAFT SEQU... 48 2.2 9
(BV753557) pRRL2:Newb:20080411:125471 USMARC Pig Breed SNP D... 48 2.3 1
(BV237122) S234P6468FB5.T0 EnglishShepherd Canis familiaris ... 48 2.3 1
(BX537302) Mouse DNA sequence from clone RP23-349I9 on chrom... 48 2.3 1
(AC167232) Mus musculus BAC RP24-496C19 (Roswell Park Cance... 48 2.3 1
(AM466234) Vitis vinifera contig VV78X066251.26, whole genom... 48 2.3 1
(AM433721) Vitis vinifera contig VV78X233805.4, whole genome... 48 2.3 1
(AC215733) Populus trichocarpa clone POP051-I21, complete se... 48 2.3 1
(AX346665) Sequence 1736 from Patent WO0200928. 48 2.3 1
(CP000212) Drosophila melanogaster genomic scaffold 21100002... 48 2.3 1
(AC011998) Homo sapiens BAC clone RP11-318F5 from 2, complet... 48 2.3 1
(AC158075) Bos taurus clone CH240-53E16, WORKING DRAFT SEQUE... 48 2.3 1
(AC141820) Apis mellifera clone CH224-62B19, *** SEQUENCING ... 48 2.3 1
(CU856053) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.3 1
(AC073807) Mus musculus clone RP23-49A18, WORKING DRAFT SEQU... 48 2.3 1
(BX539339) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 48 2.3 1
(AC210174) Zea mays chromosome 2 clone CH201-124D8; ZMMBBc01... 48 2.3 1
(AC170318) Bos taurus clone CH240-261G4, WORKING DRAFT SEQUE... 48 2.3 1
(AC170218) Bos taurus clone CH240-241P12, WORKING DRAFT SEQU... 48 2.3 1
(AK016323) Mus musculus adult male testis cDNA, RIKEN full-l... 48 2.3 1
(FH514249) CHO_OF4815xn15f1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 2.3 1
(AG530064) Mus musculus molossinus DNA, clone:MSMg01-439M18.... 48 2.3 1
(EG999046) 031021NL19EMM00017A10 NL19EMM Neotyphodium lolii ... 48 2.3 1
(BJ371292) Dictyostelium discoideum cDNA clone:ddc57k10, 5' ... 48 2.3 1
(BJ334072) Dictyostelium discoideum cDNA clone:dda45c02, 5' ... 48 2.3 1
(BI154206) 602903012F1 NCI_CGAP_Mam3 Mus musculus cDNA clone... 48 2.3 1
(FG089005) CMRC-FF-IH0-acm-b-13-0-CMRC.r1 Ceratitis capitata... 48 2.3 1
(EU912438) Vaucheria litorea chloroplast, complete genome. 46 2.3 9
(FB571381) Sequence 248 from Patent EP1865317. 32 2.4 14
(FB571325) Sequence 192 from Patent EP1865317. 32 2.4 14
(AX346678) Sequence 1749 from Patent WO0200928. 42 2.4 3
(AX323683) Sequence 171 from Patent WO0192565. 42 2.4 3
(AJ927332) Theileria annulata EST, clone tam028h05_q1k. 40 2.4 2
(EJ320375) 1095403357849 Global-Ocean-Sampling_GS-27-01-01-1... 34 2.5 4
(AM476897) Vitis vinifera contig VV78X256893.2, whole genome... 38 2.5 2
(CD163018) ML1-0081T-M291-B03-U.G ML1-0081 Schistosoma manso... 40 2.5 2
(AX345695) Sequence 766 from Patent WO0200928. 34 2.6 6
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 34 2.6 17
(CW609064) OA_ABa0149O20.f OA_ABa Oryza australiensis genomi... 38 2.8 3
(FB571304) Sequence 171 from Patent EP1865317. 32 2.9 15
(AC018460) Arabidopsis thaliana chromosome I BAC F11O6 genom... 46 2.9 6
(CU928184) Brassica rapa subsp. pekinensis clone KBrH032O08,... 34 2.9 10
(AC189380) Brassica rapa subsp. pekinensis clone KBrB050K06,... 38 2.9 6
(AC184094) Populus trichocarpa clone Pop1-65G21, WORKING DRA... 32 3.1 8
(AM466843) Vitis vinifera contig VV78X021238.7, whole genome... 46 3.1 4
(AG280095) Mus musculus molossinus DNA, clone:MSMg01-051E10.... 40 3.2 2
(EC819330) SME00007176 esmbsro2 Sawyeria marylandensis cDNA,... 42 3.3 2
(AM459972) Vitis vinifera contig VV78X211145.6, whole genome... 36 3.3 6
(AC155886) Medicago truncatula chromosome 7 clone mth2-173o2... 32 3.4 14
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 32 3.4 17
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 32 3.5 15
(FF452432) G178P60154RB2.T0 Acorn worm gastrula/neurula pCMV... 36 3.6 2
(DX013536) KBrB004M09F KBrB, Brassica rapa BamHI BAC library... 38 3.7 3
(AE017308) Mycoplasma mobile 163K complete genome. 34 3.7 19
(CP000087) Rickettsia bellii RML369-C, complete genome. 38 3.9 22
(EK403827) 1095469555922 Global-Ocean-Sampling_GS-31-01-01-1... 42 3.9 3
(AM470465) Vitis vinifera contig VV78X192863.43, whole genom... 44 3.9 6
(AC212928) Populus trichocarpa clone POP043-P14, complete se... 38 4.0 12
(CR940352) Theileria annulata genomic DNA chromosome 3. 38 4.0 21
(BK006346) TPA_exp: Apis mellifera sex determination locus, ... 36 4.0 5
(DX522901) GH_MBb0028B24f GH_MBb Gossypium hirsutum genomic ... 38 4.1 4
(BX511197) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 4.1 2
(AX346901) Sequence 1972 from Patent WO0200928. 38 4.1 6
(AG964879) Drosophila sechellia DNA, clone: DSE1-026M03.R.fa... 46 4.2 2
(AL034557) Plasmodium falciparum MAL4P1. 36 4.2 2
(DU924965) 348070 Tomato EcoRI BAC Library Solanum lycopersi... 40 4.2 3
(AB009928) Drilaster sp. 'Kume-jima Island' mitochondrial DN... 36 4.3 3
(AM448826) Vitis vinifera contig VV78X244630.7, whole genome... 38 4.3 5
(AC151477) Mus musculus BAC clone RP23-154G20 from 7, comple... 34 4.4 2
(CU570754) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 4.4 2
(CR388132) Zebrafish DNA sequence from clone DKEY-23A23 in l... 34 4.4 2
(AC123820) Mus musculus BAC clone RP23-461O5 from chromosome... 34 4.4 2
(CU179708) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 4.4 2
(AL929016) Zebrafish DNA sequence from clone DKEY-24J9 in li... 32 4.4 2
(CU672256) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 4.4 2
(AL161509) Arabidopsis thaliana DNA chromosome 4, contig fra... 36 4.4 2
(AC230277) Bos taurus clone CH240-514M21, WORKING DRAFT SEQU... 34 4.4 2
(AC125323) Mus musculus BAC clone RP23-447G3 from chromosome... 34 4.4 2
(CU633211) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 4.4 2
(BX511301) Zebrafish DNA sequence from clone RP71-19M20 in l... 34 4.4 2
(AC140688) Rattus norvegicus clone CH230-66P11, *** SEQUENCI... 34 4.4 2
(CE378804) tigr-gss-dog-17000334186200 Dog Library Canis lup... 36 4.4 2
(AM425044) Vitis vinifera contig VV78X013363.48, whole genom... 38 4.5 4
(CU468931) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 4.5 2
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 38 4.5 20
(AC055707) Homo sapiens 12 BAC RP11-877E17 (Roswell Park Can... 34 4.5 2
(CU459216) Zebrafish DNA sequence from clone CH73-30L9 in li... 34 4.5 2
(AC226828) Medicago truncatula chromosome 2 clone mth2-168c2... 34 4.5 2
(AP010111) Lotus japonicus genomic DNA, clone: LjT48O18, TM0... 36 4.5 2
(AC146745) Medicago truncatula clone mth2-53p19, complete se... 36 4.5 2
(AC194364) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 36 4.6 2
(BD428860) Method and nucleic acids for pharmacogenomic meth... 34 4.6 7
(AX348339) Sequence 34 from Patent WO0202806. 34 4.6 7
(AF160183) Arabidopsis thaliana BAC T17A2. 36 4.6 2
(CP000994) Borrelia recurrentis A1 plasmid pl124, complete s... 36 4.7 13
(AX344552) Sequence 3 from Patent WO0200932. 40 4.7 17
(AC024225) Homo sapiens 12 BAC RP11-16A24 (Roswell Park Canc... 34 4.7 2
(AC201090) Strongylocentrotus purpuratus clone R3-13G15, WOR... 32 5.0 9
(AE014827) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 5.0 13
(AQ489495) RPCI-11-230C23.TV RPCI-11 Homo sapiens genomic cl... 34 5.1 3
(AM055407) Polyplastron multivesiculatum EST, clone Pm03_C01. 36 5.2 2
(EI330081) GM_WBc0069C10.f GM_WBc Glycine max genomic clone ... 36 5.3 2
(AM466565) Vitis vinifera contig VV78X203179.10, whole genom... 44 5.5 3
(DX398845) GH__Sa0018B06.b1 Gossypium herbaceum WGS library ... 32 5.5 4
(AM456596) Vitis vinifera contig VV78X028684.1, whole genome... 36 5.7 2
(BZ000334) oeh12d05.g1 B.oleracea002 Brassica oleracea genom... 44 5.8 2
(DX061805) KBrB068H08F KBrB, Brassica rapa BamHI BAC library... 34 5.8 3
(BH558027) BOHFN50TR BOHF Brassica oleracea genomic clone BO... 40 5.8 2
(DT800248) 126472224 TL1 Tribolium castaneum cDNA clone 25I1... 34 5.9 2
(BZ519479) BOMQK74TF BO_2_3_KB Brassica oleracea genomic clo... 34 5.9 2
(CE848202) tigr-gss-dog-17000332965189 Dog Library Canis lup... 34 6.0 2
(CE684961) tigr-gss-dog-17000314530152 Dog Library Canis lup... 34 6.0 2
(AZ743820) RPCI-24-111B17.TJ RPCI-24 Mus musculus genomic cl... 34 6.0 2
(BS000217) Pan troglodytes chromosome 22 clone:PTB-004I03, m... 40 6.1 5
(CE156284) tigr-gss-dog-17000371381001 Dog Library Canis lup... 36 6.1 2
(EK145075) 1095456016657 Global-Ocean-Sampling_GS-31-01-01-1... 42 6.1 2
(CE185682) tigr-gss-dog-17000308693787 Dog Library Canis lup... 34 6.2 2
(AM472557) Vitis vinifera contig VV78X058285.20, whole genom... 36 6.2 5
(CX634463) taj53e10.x3 Hydra EST UCI 5 Hydra magnipapillata ... 34 6.2 2
(DX559888) GH_MBb0081I23f GH_MBb Gossypium hirsutum genomic ... 36 6.3 3
(ER857327) POTJZ64TF Solanum tuberosum RHPOTKEY BAC ends Sol... 44 6.4 2
(DV372940) NACMI26TF Aedes aegypti infected with Plasmodium ... 32 6.4 2
(AX345878) Sequence 949 from Patent WO0200928. 38 6.5 5
(CU984557) Brassica rapa subsp. pekinensis clone KBrH017J01,... 34 6.6 7
(AY691415) Ferrisia gilli cytochrome b (cytb) gene, partial ... 32 6.6 5
(AU265490) Dictyostelium discoideum vegetative cDNA clone:VS... 42 6.7 3
(FI085477) CHO_OF7896xm06f1.ab1 CHO_OF7 Nicotiana tabacum ge... 36 6.7 2
(AC213016) Populus trichocarpa clone POP038-D19, complete se... 32 6.8 12
(FP024456) Brassica napus GSS, clone JBnB131N21, end read, p... 38 6.9 3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 34 6.9 17
(CC484205) CH240_313K24.T7 CHORI-240 Bos taurus genomic clon... 46 6.9 2
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 32 7.0 12
(AF190297) Arabidopsis thaliana ecotype Columbia transparent... 38 7.1 3
(AM457686) Vitis vinifera contig VV78X096457.8, whole genome... 34 7.1 4
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 34 7.2 14
(BZ700234) PUBMJ28TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 36 7.3 2
(AC189578) Brassica rapa subsp. pekinensis clone KBrH011G12,... 42 7.3 11
(BJ393292) Dictyostelium discoideum cDNA clone:dds30g20, 5' ... 42 7.4 3
(BH934757) odf87f02.g1 B.oleracea002 Brassica oleracea genom... 42 7.4 3
(EV425337) 210754666 NVP Nasonia vitripennis cDNA clone 200M... 34 7.4 4
(DY886786) CeleSEQ2566 Cunninghamella elegans pBluescript (E... 46 7.5 2
(DD391981) Method and nucleic acids for the improved treatme... 34 7.8 5
(DD391707) Method and nucleic acids for the improved treatme... 34 7.8 5
(DD061399) Methods and nucleic acids for the analysis of he... 34 7.8 5
(DD061253) Methods and nucleic acids for the analysis of he... 34 7.8 5
(CQ807237) Sequence 687 from Patent WO2004035803. 34 7.8 5
(CQ806963) Sequence 413 from Patent WO2004035803. 34 7.8 5
(AX598961) Sequence 301 from Patent WO02077272. 34 7.8 5
(AX598815) Sequence 155 from Patent WO02077272. 34 7.8 5
(DU843806) 28305 Tomato HindIII BAC Library Solanum lycopers... 38 7.9 2
(AX344624) Sequence 49 from Patent WO0200927. 36 7.9 6
(EK576054) 1095521191430 Global-Ocean-Sampling_GS-32-01-01-1... 32 7.9 4
(ED520321) KBrB107G14R KBrB, Brassica rapa BamHI BAC library... 36 8.0 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 38 8.0 9
(AC163837) Bos taurus clone CH240-108C13, WORKING DRAFT SEQU... 38 8.1 9
(ER285660) 1092343568139 Global-Ocean-Sampling_GS-34-01-01-1... 30 8.1 4
(CU856591) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 8.1 10
(CT956020) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 8.2 10
(X59157) Drosophila melanogaster stellate pseudogenes. 40 8.2 2
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 34 8.3 19
(AY572539) Neomaskellia andropogonis mitochondrion, complete... 32 8.3 6
(AC166893) Dasypus novemcinctus clone VMRC5-234H21, WORKING ... 40 8.4 8
(ET806328) CHO_OF730xd18f1.ab1 CHO_OF Nicotiana tabacum geno... 34 8.5 3
(BX571696) Zebrafish DNA sequence from clone CH211-140B10 in... 42 8.7 8
(EJ453053) 1093015455500 Global-Ocean-Sampling_GS-28-01-01-1... 34 8.8 4
(AM470537) Vitis vinifera contig VV78X193117.8, whole genome... 36 8.8 5
(AC014570) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 8.9 2
(AP007156) Aspergillus oryzae RIB40 genomic DNA, 47Q_0155. 36 8.9 5
(DX057583) KBrB062N24R KBrB, Brassica rapa BamHI BAC library... 34 8.9 3
(DX058382) KBrB063P04R KBrB, Brassica rapa BamHI BAC library... 34 8.9 3
(AC135259) Homo sapiens chromosome 15 clone RP11-89E18 map 1... 36 8.9 7
(CT561949) A BAC library has been constructed from cultivar ... 30 9.0 4
(EK214431) 1095460111787 Global-Ocean-Sampling_GS-31-01-01-1... 30 9.1 5
(AC023261) Homo sapiens chromosome 12 clone RP11-377L21 map ... 38 9.1 9
(BH957284) odg69h02.g1 B.oleracea002 Brassica oleracea genom... 36 9.2 3
(CU367845) Zebrafish DNA sequence from clone CH73-120I4 in l... 46 9.2 1
(AL772295) Zebrafish DNA sequence from clone CH211-14A17 in ... 46 9.2 1
(AC206409) Pongo abelii BAC clone CH276-292F21 from chromoso... 46 9.2 1
(AM455031) Vitis vinifera contig VV78X072688.11, whole genom... 46 9.2 1
(AC189451) Brassica rapa subsp. pekinensis clone KBrB071P24,... 46 9.2 1
(AC079605) Arabidopsis thaliana chromosome 1 BAC T32G9 genom... 46 9.2 1
(CP000188) Drosophila melanogaster genomic scaffold 21100002... 46 9.2 1
(BC029460) Homo sapiens Ca++-dependent secretion activator, ... 46 9.2 1
(AL355773) Human chromosome 14 DNA sequence BAC R-813I20 of ... 46 9.2 1
(AL157690) Human chromosome 14 DNA sequence BAC R-565E24 of ... 46 9.2 1
(AC133605) Homo sapiens BAC clone CTD-2012B5 from 4, complet... 46 9.2 1
(AC119037) Homo sapiens 3 BAC RP11-495D2 (Roswell Park Cance... 46 9.2 1
(AC117426) Homo sapiens 3 BAC RP11-130C13 (Roswell Park Canc... 46 9.2 1
(AC093596) Homo sapiens BAC clone RP11-98M12 from 4, complet... 46 9.2 1
(AC092039) Homo sapiens chromosome 3 clone RP11-114P15, comp... 46 9.2 1
(AC011303) Homo sapiens BAC clone RP11-342D6 from 2, complet... 46 9.2 1
(AC009411) Homo sapiens BAC clone RP11-342D1 from 2, complet... 46 9.2 1
(AC157290) Bos taurus clone CH240-74M18, WORKING DRAFT SEQUE... 46 9.2 1
(AC151396) Felis catus clone RP86-509D8, WORKING DRAFT SEQUE... 46 9.2 1
(AC140793) Rattus norvegicus clone CH230-367E12, WORKING DRA... 46 9.2 1
(AC133276) Rattus norvegicus clone CH230-95B14, *** SEQUENCI... 46 9.2 1
(AC132021) Rattus norvegicus clone CH230-251G3, WORKING DRAF... 46 9.2 1
(AC125809) Rattus norvegicus clone CH230-362G6, *** SEQUENCI... 46 9.2 1
(AC096681) Canis lupus familiaris clone RP81-228C19, WORKING... 46 9.2 1
(AC096285) Rattus norvegicus clone CH230-38A18, WORKING DRAF... 46 9.2 1
(FP015916) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 9.2 1
(CU856201) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 9.2 1
(AC092744) Homo sapiens chromosome 12 clone RP11-23B17, WORK... 46 9.2 1
(AC084378) Homo sapiens chromosome 4 clone RP11-710D11, WORK... 46 9.2 1
(AC079994) Homo sapiens chromosome 4 clone RP11-545L22, WORK... 46 9.2 1
(CU466489) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 9.2 1
(CU019589) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 9.2 1
(AC230258) Bos taurus clone CH240-515C2, WORKING DRAFT SEQUE... 46 9.2 1
(AC221425) Bos taurus clone CH240-406N3, WORKING DRAFT SEQUE... 46 9.2 1
(AC219650) Bos taurus clone CH240-326M15, WORKING DRAFT SEQU... 46 9.2 1
(AC217731) Solanum tuberosum chromosome 1 clone RH164M22, **... 46 9.2 1
(AC185074) Bos taurus clone CH240-190B2, WORKING DRAFT SEQUE... 46 9.2 1
(AC182887) Bos taurus clone CH240-527K4, WORKING DRAFT SEQUE... 46 9.2 1
(AC179467) Strongylocentrotus purpuratus clone R3-63K14, WOR... 46 9.2 1
(AC170577) Bos taurus clone CH240-195D1, WORKING DRAFT SEQUE... 46 9.2 1
(AC165805) Bos taurus clone CH240-158C4, WORKING DRAFT SEQUE... 46 9.2 1
(AC023075) Homo sapiens chromosome 1 clone RP11-534J20 map 1... 46 9.2 1
(AC019112) Homo sapiens chromosome 3 clone RP11-495D2, WORKI... 46 9.2 1
(AC018899) Homo sapiens chromosome 3 clone RP11-111J19, WORK... 46 9.2 1
(AC018434) Homo sapiens clone RP11-23C21, LOW-PASS SEQUENCE ... 46 9.2 1
(AC013348) Homo sapiens clone RP11-22J5, LOW-PASS SEQUENCE S... 46 9.2 1
(BH494038) BOHOA30TR BOHO Brassica oleracea genomic clone BO... 46 9.2 1
(AZ336673) 1M0067L02F Mouse 10kb plasmid UUGC1M library Mus ... 46 9.2 1
(ER737736) SB_BBc221-K23.F SB_BBc Sorghum bicolor genomic 5'... 46 9.2 1
(EK557311) 1095518003985 Global-Ocean-Sampling_GS-32-01-01-1... 46 9.2 1
(EJ888598) 1093018430789 Global-Ocean-Sampling_GS-30-02-01-1... 46 9.2 1
(EJ876082) 1093018370693 Global-Ocean-Sampling_GS-30-02-01-1... 46 9.2 1
(AQ277657) CITBI-E1-2518H21.TF CITBI-E1 Homo sapiens genomic... 46 9.2 1
(EJ243648) 1095333029509 Global-Ocean-Sampling_GS-27-01-01-1... 46 9.2 1
(EJ104120) 1092343130782 Global-Ocean-Sampling_GS-27-01-01-1... 46 9.2 1
(DX550242) GH_MBb0029I19f GH_MBb Gossypium hirsutum genomic ... 46 9.2 1
(DU966843) 288344 Tomato MboI BAC Library Solanum lycopersic... 46 9.2 1
(DU800078) lv01_fp004q354 Lenti virus vector integration jun... 46 9.2 1
(CZ770936) OC__Ba0128D10.r OC__Ba Oryza coarctata genomic cl... 46 9.2 1
(CT494295) A BAC library has been constructed from cultivar ... 46 9.2 1
(B79132) CIT-HSP-722B24.TV CIT-HSP Homo sapiens genomic clon... 46 9.2 1
(BH925350) odi46f06.b1 B.oleracea002 Brassica oleracea genom... 46 9.2 1
(BH899863) Ots00930 Ostreococcus tauri genomic shotgun libra... 46 9.2 1
(BH654095) BOMCA39TF BO_2_3_KB Brassica oleracea genomic clo... 46 9.2 1
(EH240530) JGI_ACAC19922.rev ACAC Phakopsora pachyrhizi TW72... 46 9.2 1
(EH239961) JGI_ACAC10334.rev ACAC Phakopsora pachyrhizi TW72... 46 9.2 1
(EH238288) JGI_ACAC18693.rev ACAC Phakopsora pachyrhizi TW72... 46 9.2 1
(EH236105) JGI_ACAC19834.rev ACAC Phakopsora pachyrhizi TW72... 46 9.2 1
(CF518572) CAP0007_IIR_G10 Vitis vinifera cv. cabernet sauvi... 46 9.2 1
(CF518487) CAP0007_IIF_G10 Vitis vinifera cv. cabernet sauvi... 46 9.2 1
(CA525447) KS12055C10 KS12 Capsicum annuum cDNA, mRNA sequence. 46 9.2 1
(AI759566) EtESTea22c05.x1 Eimeria S5-2 Sporozoite stage Eim... 46 9.2 1
(BM882771) rb29e04.y1 Meloidogyne incognita egg pAMP1 Bird M... 46 9.2 1
(EY877733) CL06-C4-501-070-C12-CT.F Rangpur lime root, plant... 46 9.2 1
(EF456687) Staphylococcus xylosus DSM20267 C2a F0F1-type ATP... 46 9.2 1
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 46 9.2 1
(CS468878) Sequence 69 from Patent EP1748080. 36 9.3 16
(CS419355) Sequence 69 from Patent WO2006094836. 36 9.3 16
(AM455156) Vitis vinifera contig VV78X092456.1, whole genome... 36 9.4 4
(CS374628) Sequence 731 from Patent WO2006034879. 38 9.4 4
(CS374356) Sequence 459 from Patent WO2006034879. 38 9.4 4
(CR318647) Zebrafish DNA sequence from clone CH211-159M16 in... 40 9.6 8
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 34 9.7 9
(AX345384) Sequence 455 from Patent WO0200928. 38 9.7 5
(AM439890) Vitis vinifera contig VV78X149540.12, whole genom... 34 9.8 4
(DD061484) Methods and nucleic acids for the analysis of he... 34 9.9 7
(AX599046) Sequence 386 from Patent WO02077272. 34 9.9 7
(AC108740) Homo sapiens 3 BAC RP11-481N16 (Roswell Park Canc... 36 10.0 10
(CT998561) Zebrafish DNA sequence from clone DKEYP-13B9 in l... 44 10.0 7

>(BJ373849) Dictyostelium discoideum cDNA clone:ddc5e05, 3' end,
single read.
Length = 692

Score = 1322 bits (667), Expect = 0.0
Identities = 667/667 (100%)
Strand = Plus / Minus


Query: 1279 gatgtcgagcgtgatgaaaccatcgttagattacaacgtcgtctaacagaggtgactcag 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gatgtcgagcgtgatgaaaccatcgttagattacaacgtcgtctaacagaggtgactcag 633


Query: 1339 gtgatcgtcatgaacattgaggagcgtaataaggagggtggctcatcgaccaatggtatt 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gtgatcgtcatgaacattgaggagcgtaataaggagggtggctcatcgaccaatggtatt 573


Query: 1399 ggctatttgtttggtacaatacttcaaacaaagaatgtcaaggatttgccaccggatcta 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggctatttgtttggtacaatacttcaaacaaagaatgtcaaggatttgccaccggatcta 513


Query: 1459 tcagagtttatacagattatgattaagattctatcactttggatggagagagagatgagg 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tcagagtttatacagattatgattaagattctatcactttggatggagagagagatgagg 453


Query: 1519 gacccaaaacaagtcaccaaattaaaacgtctatacatgataaccccaatcactgcgatc 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gacccaaaacaagtcaccaaattaaaacgtctatacatgataaccccaatcactgcgatc 393


Query: 1579 aaagcatccctcaatatcgccaatccagttacactcttgaaaggtatgattttaatgttt 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aaagcatccctcaatatcgccaatccagttacactcttgaaaggtatgattttaatgttt 333


Query: 1639 ttagccaaaccatttggtgcaagaaatttaatgcaaaccatttgttccgtaatggttgag 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttagccaaaccatttggtgcaagaaatttaatgcaaaccatttgttccgtaatggttgag 273


Query: 1699 gcggcaaaaactgaacgtaccgcaaagaaagctcataaaaaggccgaacaagatttatcc 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gcggcaaaaactgaacgtaccgcaaagaaagctcataaaaaggccgaacaagatttatcc 213


Query: 1759 gatttaaaacatgccgtacgtaaacaagttttagcaaaaattaaaggattcgcttacaat 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gatttaaaacatgccgtacgtaaacaagttttagcaaaaattaaaggattcgcttacaat 153


Query: 1819 tctcatcatgtttccgatgccgctggttcacccattttacaattcaaagagattccatcg 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tctcatcatgtttccgatgccgctggttcacccattttacaattcaaagagattccatcg 93


Query: 1879 gcaatttcaatacttcaatatcaatggccaggttctccatcattggatgcttcaatctta 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gcaatttcaatacttcaatatcaatggccaggttctccatcattggatgcttcaatctta 33


Query: 1939 caacaat 1945
|||||||
Sbjct: 32 caacaat 26

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 3,620,530,559
Number of extensions: 232580228
Number of successful extensions: 21613691
Number of sequences better than 10.0: 467
Length of query: 3592
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 3567
Effective length of database: 96,311,147,814
Effective search space: 343541864252538
Effective search space used: 343541864252538
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15766-1 (Contig-U15766-1Q) /CSM_Contig/Contig-U15766-1Q.Seq.d
(3592 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AM920435_641(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 80 4e-13
AP007151_1272(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 79 9e-13
CR382128_38(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 79 9e-13
AM270030_1(AM270030|pid:none) Aspergillus niger contig An02c0360... 75 1e-11
CR380957_345(CR380957|pid:none) Candida glabrata strain CBS138 c... 63 7e-08
(Q06839) RecName: Full=PX domain-containing protein YPR097W; &S... 62 2e-07
FN392321_596(FN392321|pid:none) Pichia pastoris GS115 chromosome... 59 1e-06
CU928170_462(CU928170|pid:none) Kluyveromyces thermotolerans str... 50 6e-04
AE016818_26(AE016818|pid:none) Ashbya gossypii (= Eremothecium g... 46 0.011
FM992693_291(FM992693|pid:none) Candida dubliniensis CD36 chromo... 44 0.043
AC115598_4(AC115598|pid:none) Dictyostelium discoideum chromosom... 39 1.1
CR382137_60(CR382137|pid:none) Debaryomyces hansenii strain CBS7... 38 2.4
CP000497_289(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 38 3.1

>AM920435_641(AM920435|pid:none) Penicillium chrysogenum Wisconsin
54-1255 complete genome, contig Pc00c20.
Length = 911

Score = 80.5 bits (197), Expect = 4e-13
Identities = 68/309 (22%), Positives = 137/309 (44%), Gaps = 29/309 (9%)
Frame = +1

Query: 1285 ERDETIVRLQRRLTEVTQVIVMNIE---ERNKEGGSSTNGIGYLFGTILQTKNVKDLPPD 1455
+ D + Q+R E+ + ++ ER + +NG+ LF I + + DL P
Sbjct: 385 DMDAVRIEEQKRFYEIARQRAAELDVYMERFRRDIVESNGLTKLFAEIREKPTIADLSPQ 444

Query: 1456 LSEF-----IQIMIKILSLWMEREMRDPKQVTKLKRLYMITPITAIKASLNIANPVTLLK 1620
+F I++ I L++ + P+ + KR++ + P T +K + IANP ++
Sbjct: 445 YQKFAEWLRIEVAATIYHLFLAED-NSPELFAQAKRIHGLVPYTLMKNVIRIANPAAVMS 503

Query: 1621 GMILMFLAKPFGARNLMQTICSVMVXXXXXXXXXXXXXXXXXQDLSDLKHAVRKQVLA-K 1797
G++ +F+A+PFG+R+L+Q I S+ + + + L V VL K
Sbjct: 504 GVLDLFMAQPFGSRSLLQRIFSLTL---------NDSIKDFQKSIDSLASKVEDTVLTQK 554

Query: 1798 IKGFAYNSHHVSDAAGSPILQFKEIPSAISILQYQWPGSPSL------------------ 1923
+K FA ++ + + + ++ ++IL+ + SP L
Sbjct: 555 LKSFADAEENIKNDIRAEAVA-DDVDIIVAILRSELL-SPELTPDQVGKVFNGYVAWNNA 612

Query: 1924 --DASILQQLNEEQFKSLFEYAKLEKRKKEKEDFVEILGNEEMIEIIRELLPVLYEPLGK 2097
+ Q + F + + KL R+++K + I+ +++ R+L + YEPL +
Sbjct: 613 VEHVDLEMQQGAQWFAHMKQLLKLYTRQRDKAMMLSIVEEPVTLQLFRDLFTIFYEPLVR 672

Query: 2098 LFCKANIGN 2124
++ AN+ N
Sbjct: 673 VYKSANVYN 681

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,769,576,925
Number of extensions: 65784232
Number of successful extensions: 190669
Number of sequences better than 10.0: 13
Number of HSP's gapped: 190519
Number of HSP's successfully gapped: 16
Length of query: 1197
Length of database: 1,051,180,864
Length adjustment: 140
Effective length of query: 1057
Effective length of database: 598,062,604
Effective search space: 632152172428
Effective search space used: 632152172428
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 1.05 gvh: 0.55 alm: 0.35 top: 0.60 tms: 0.00 mit: 0.50 mip: 0.00
nuc: 0.59 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

68.0 %: nuclear
16.0 %: mitochondrial
12.0 %: cytoplasmic
4.0 %: plasma membrane

>> prediction for Contig-U15766-1 is nuc

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 1
AH (FL, L) 6
AF (FL, S) 1
SL (DIR, L) 2
SS (DIR, S) 1
SH (FL, L) 9
SF (FL, S) 1
CH (FL, L) 16
CF (FL, S) 3
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0