Contig-U15754-1
Contig ID Contig-U15754-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15754-1 (Contig-U15754-1Q) /CSM_Contig/Contig-U15754-1Q.Seq.d
CACTGTTGGCCTACTGGATTTTCATTTTCATTTTCATCACAATAATAATG
GAACAAAAAAGATTAGATGATTCATTATTAAGAAATTCTGATTGGAAGAA
TTGGGGTACCTATGTAAGTGATAGACAATGGGCAACTGTTCGTGAAGATT
ATGGTGGTGAACCATGGACCTACTTTCCACACGATCATGCTAGATCACGT
GCATATAGATGGTCAGAGGATAGTATTGGTGGATTTTGTAATAGATTTCA
AAATATTTGTTTAGGTTTAGCATTTTGGAATGAAAAAGATCCAATTATTA
AAGAGAGATTTTTTGGACTTGGTGGACCAGAAGGAAATCATGGTGAAGAT
GTAAAAGAACATTATTTCTATTTAGATAATACACCAACACATTCCTATGC
CAAAATGTTATATAAATATCCAATGAATGAATATCCATATAGTGATTTAG
TATCAACCAATGCACAACGTGGTAAACAAGATCCAGAGTATGAAATTGAA
GATACTGGTATCTTTGATAAGGATGAATATTTCGATTGTTACATTGAATA
TGCTAAAGGAGATCAAGAAGATGATATTTTATGTAAAGTTACCGTACATA
ATCGTTCAACCCGATAGAGAAGCAACCATTCATGTACTTCCACATCTTTG
GTATCGTAATACTTGGTCATGGGGTTATTCAGATCGTCGTCCATATATTC
ATCGTCATACACATAATCAATTGGTTAGTGAAGAAGTTCATATTGGTAAA
AGATATTATATCGTGGAAACATCTGATGCAGCAGCAGCAACAGGAAAAAA
GAA----------TTTAGCTTTTCAAATGATACCAATGATGTTATTAGAT
ATTGAATGGACAAAACGTCAATTGATTCTAATTACTCGTGAATGGTATTC
TCATTCAAGTGGTGCACTTTGCGCATATGAATGGGATTTTGGTGATGTAA
ATCCACCAGTACATGCATGGGCAACCTTGGAAGTCTATAAACATATAGAG
AAAACAACCGGTGTTAAAGATATCGAATTTTTGGAGCAAATTTTCCATAA
ACTTTTATTAAATTTCACTTGGTGGGTCAATAAAAAAGATATCAAAGGTA
ATAACATTTTTGAAGGTGGTTTCTTAGGTCTTGATAATATTGGTGTATTC
GATAGATCAACACCATTGAAAGATGGTGCTAAACTTCAACAAGCCGATGG
TACATCATGGATGGCATTCTATAGTGCCAATATGTTGAAAATCTCCTTGA
TTTTAGCACGTGAAAGAAACTCTTATGAATCAATCGCCACTAAATTCCTC
GAACATTTCATTAGCATTGCCAAGAGTATCACCTCAAAAACTGGTTTATG
GAGTAATGAGGATGGTTTCTTCTTTGATTCAATCATTTCACCAGGTTCTC
ATCAACATCAACTCAAAGTCTATTCATTCGTTGGTTTAATACCATTGTTT
GCTGCTGAAATTTTGGATTATGATACACTTCAAGCTTTACCAAAATTCAA
AGAACGTTTGGATTGGTTCGTAAAGTATAGACCAAATTTAGTGAAAAACA
TTGCTCCATTCACTGCTTTGGGTCAAAATAAATCACGTTTACTCTCAATT
GTAAATCGTGAGAAATTGGAATTAATCTTAAAGAAAATGTTGGATGAAGA
TTGGTTCCTCTCTGAAAATGGTATTAGATCATTATCAAAACATCACAAGG
ATCATCCATTCACTTTTGCTGAGATGGATGCTTGTGTTGGTTATGTACCT
GGCGAGAGTGATGTTCATATCATGGGTTCAAATAGTAATTGGAGAGGTCC
AGTTTGGTTTGCCGTAAATTATCTCATGATTCAATCACTTCGTACCTATC
ATGAATACTATGGTGATGAATTCCAAATTGAATATCCAACAAACTCTGGT
AACCTCGTAACTTTGGATATCGTAGCCGATGATATCTCTAAACGTCTCAT
TAGTATCTTCCAAGAGAATCAAGATGGTACTAGAAAATTTGCTGGTGGTA
AACCAATTTTCGCAAAAAAACATTGGAAAGATCATATATTGTTCAATGAA
TATTTCCATGGTGATAGTGGTGCTGGTCTTGGTGCTTCTCACCAGACTGG
TTGGACTGCCTTGGTCGCCAAGTTAATTAATGAAATTAAAAAATAAAAAA
TTAAAAATTAAAAATTAAAAAATAAAAAATAATAAAATCTTAAAATTTT

Gap gap included
Contig length 2189
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 2684089
End point 2681917
Strand (PLUS/MINUS) MINUS
Number of clones 46
Number of EST 90
Link to clone list U15754
List of clone(s)

est1=VHB280F,1,567
est2=AHF733F,18,608
est3=VHA209F,18,603
est4=VHA832F,18,618
est5=VHE202F,18,674
est6=VHE831F,18,673
est7=VHH153F,18,578
est8=VHH413F,18,676
est9=VHL223F,18,603
est10=VHL283F,18,618
est11=VHM739F,18,619
est12=VHB680F,20,675
est13=AHF215F,24,673
est14=VHA821F,24,670
est15=VHB246F,24,615
est16=VHF272F,24,529
est17=VHL253F,24,668
est18=VHC593F,30,671
est19=VHE380F,30,719
est20=VHM565F,30,672
est21=VHN363F,30,619
est22=VHP462F,30,672
est23=VHG890F,32,676
est24=CHE595F,36,670
est25=VHB585F,36,716
est26=VHD431F,36,618
est27=VHH196F,36,617
est28=VHK382F,36,618
est29=VHK716F,36,219
est30=VHN717F,36,674
est31=VHI240F,37,673
est32=VHL133F,37,608
est33=VHH592F,38,620
est34=VHK170F,38,717
est35=VHE706F,40,675
est36=VHO401F,41,677
est37=VHJ364F,43,608
est38=VHF830F,46,588
est39=VHN241F,46,671
est40=VHN728F,46,618
est41=VHO294F,46,672
est42=CHG838F,108,727
est43=VHH211F,181,802
est44=VFN758F,804,1374
est45=FC-AB14F,952,1394
est46=VHA832Z,1338,2087
est47=VHN728Z,1345,2087
est48=VHA209Z,1361,2154
est49=VHM565Z,1361,2087
est50=VHB280Z,1362,2161
est51=VHB585Z,1362,2133
est52=VHK170Z,1362,2088
est53=VHB680Z,1363,2087
est54=VHN241Z,1363,2087
est55=VHP462Z,1363,2087
est56=VHI240Z,1364,2161
est57=AHF733Z,1365,2087
est58=VHD431Z,1365,2154
est59=AHF215Z,1366,2170
est60=VHA821Z,1366,2087
est61=VHM739Z,1366,2087
est62=VHN717Z,1366,2147
est63=VHL223Z,1394,2087
est64=VHB246Z,1411,2189
est65=VHJ364Z,1411,2172
est66=VHC593Z,1412,2161
est67=VHH592Z,1412,2157
est68=VHL253Z,1422,2176
est69=VHE380Z,1429,2087
est70=VHF830Z,1433,2086
est71=VHL133Z,1436,2087
est72=VHE831Z,1437,2171
est73=VHL283Z,1438,2165
est74=CHG838Z,1441,2211
est75=VHK382Z,1443,2185
est76=CHE595Z,1454,2187
est77=VHE202Z,1454,2154
est78=VHN363Z,1455,2170
est79=VHO294Z,1456,2137
est80=VHH211Z,1486,2161
est81=VHF272Z,1507,2099
est82=VHE706Z,1510,2188
est83=VHO401Z,1511,2148
est84=AHP832Z,1518,2166
est85=VHH153Z,1533,2120
est86=VHG890Z,1567,2188
est87=VFN758Z,1602,2023
est88=VHH196Z,1605,2188
est89=VHH413Z,1622,2170
est90=FC-AB14Z,1724,2164
Translated Amino Acid sequence
hcwptgfsfsfssq**wnkkd*mihy*eiligrigvpm*vidngqlfvkimvvnhgptfh
timldhvhidgqrivlvdfvidfkifv*v*hfgmkkiqllkrdfldlvdqkeimvkm*kn
iisi*iihqhipmpkcyiniq*mnihivi*YQPMHNVVNKIQSMKLKILVSLIRMNISIV
TLNMLKEIKKMIFYVKLPYIIVQPDREATIHVLPHLWYRNTWSWGYSDRRPYIHRHTHNQ
LVSEEVHIGKRYYIVETSDAAAATGKK---

---LAFQMIPMMLLDIEWTKRQLILITREWYSHSSGALCAYEWDFGDVNPPVHAWATLEV
YKHIEKTTGVKDIEFLEQIFHKLLLNFTWWVNKKDIKGNNIFEGGFLGLDNIGVFDRSTP
LKDGAKLQQADGTSWMAFYSANMLKISLILARERNSYESIATKFLEHFISIAKSITSKTG
LWSNEDGFFFDSIISPGSHQHQLKVYSFVGLIPLFAAEILDYDTLQALPKFKERLDWFVK
YRPNLVKNIAPFTALGQNKSRLLSIVNREKLELILKKMLDEDWFLSENGIRSLSKHHKDH
PFTFAEMDACVGYVPGESDVHIMGSNSNWRGPVWFAVNYLMIQSLRTYHEYYGDEFQIEY
PTNSGNLVTLDIVADDISKRLISIFQENQDGTRKFAGGKPIFAKKHWKDHILFNEYFHGD
SGAGLGASHQTGWTALVAKLINEIKK*kikn*klknkk**nlki


Translated Amino Acid sequence (All Frames)
Frame A:
hcwptgfsfsfssq**wnkkd*mihy*eiligrigvpm*vidngqlfvkimvvnhgptfh
timldhvhidgqrivlvdfvidfkifv*v*hfgmkkiqllkrdfldlvdqkeimvkm*kn
iisi*iihqhipmpkcyiniq*mnihivi*YQPMHNVVNKIQSMKLKILVSLIRMNISIV
TLNMLKEIKKMIFYVKLPYIIVQPDREATIHVLPHLWYRNTWSWGYSDRRPYIHRHTHNQ
LVSEEVHIGKRYYIVETSDAAAATGKK---

---fsfsndtndviry*mdktsidsnys*mvfsfkwctlri*mgfw*ckststcmgnlgs
l*tyrennrc*ryrifganfp*tfikfhlvgq*kryqr**hf*rwflrs**ywcir*int
ierwc*tstsrwyimdgil*cqyvenlldfst*kkll*inrh*iprtfh*hcqeyhlknw
fme**gwfll*fnhftrfsststqslfirwfntivcc*nfgl*ytssftkiqrtfglvrk
v*tkfsekhcsihcfgsk*itftlncks*eiginlkenvg*rlvpl*kwy*iiiktsqgs
sihfc*dgclcwlctwre*csyhgfk**lersslvcrklshdsitsyls*ilw**ipn*i
snklw*prnfgyrsr*yl*tsh*ylpresrwy*kicww*tnfrkktlersyivq*ifpw*
*wcwswcfspdwldclgrqvn**n*kikn*klkikk*kiiks*nf

Frame B:
tvglldfhfhfhhnnngtkkir*fiikkf*leelgylck**tmgncs*rlww*tmdllst
rsc*itci*mvrg*ywwil**iskylfrfsile*krsny*reifwtwwtrrksw*rckrt
lflfr*ytntflcqnvi*isne*isi**fsinqcttw*trsrv*n*rywyl**g*ifrll
h*ic*rrsrr*yfm*syrt*sfnpiekqpfmyfhifgivilghgviqivvhifivihiin
wlvkkfilvkdiiswkhlmqqqqqekr---

---LAFQMIPMMLLDIEWTKRQLILITREWYSHSSGALCAYEWDFGDVNPPVHAWATLEV
YKHIEKTTGVKDIEFLEQIFHKLLLNFTWWVNKKDIKGNNIFEGGFLGLDNIGVFDRSTP
LKDGAKLQQADGTSWMAFYSANMLKISLILARERNSYESIATKFLEHFISIAKSITSKTG
LWSNEDGFFFDSIISPGSHQHQLKVYSFVGLIPLFAAEILDYDTLQALPKFKERLDWFVK
YRPNLVKNIAPFTALGQNKSRLLSIVNREKLELILKKMLDEDWFLSENGIRSLSKHHKDH
PFTFAEMDACVGYVPGESDVHIMGSNSNWRGPVWFAVNYLMIQSLRTYHEYYGDEFQIEY
PTNSGNLVTLDIVADDISKRLISIFQENQDGTRKFAGGKPIFAKKHWKDHILFNEYFHGD
SGAGLGASHQTGWTALVAKLINEIKK*kikn*klknkk**nlki

Frame C:
llaywifififitiimeqkrlddsllrnsdwknwgtyvsdrqwatvredyggepwtyfph
dharsrayrwsedsiggfcnrfqniclglafwnekdpiikerffglggpegnhgedvkeh
yfyldntpthsyakmlykypmneypysdlvstnaqrgkqdpeyeiedtgifdkdeyfdcy
ieyakgdqeddilckvtvhnrstr*rsnhsctstslvs*ylvmglfrsssiysssyt*si
g**rssyw*kilyrgni*csssnrkke---

---*lfk*yq*cy*ilngqnvn*f*llvngiliqvvhfahmngilvm*ihqymhgqpwks
ini*rkqpvlkisnfwskfsinfy*islggsikkiskvitflkvvs*vliilvysidqhh
*kmvlnfnkpmvhhgwhsivpic*ksp*f*hvketlmnqsplnssnislalprvspqklv
ygvmrmvssliqsfhqvlininsksihslv*yhclllkfwimihfklyqnsknvwigs*s
idqi**ktllhsllwvkinhvysql*ivrnwn*s*rkcwmkigsslkmvldhyqnitrii
hslllrwmlvlvmylarvmfiswvqivigevqfglp*iis*fnhfvpimntmvmnsklni
qqtlvts*lwis*pmislnvslvsskrikmvlenllvvnqfsqknigkiiycsmnismvi
vvlvlvlltrlvglpwsps*lmklknkklkikn*kiknnkilkf

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15754-1 (Contig-U15754-1Q)
/CSM_Contig/Contig-U15754-1Q.Seq.d
(2199 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15754-1 (Contig-U15754-1Q) /CSM_Contig/Conti... 4125 0.0
Contig-U13964-1 (Contig-U13964-1Q) /CSM_Contig/Conti... 52 4e-06
Contig-U14188-1 (Contig-U14188-1Q) /CSM_Contig/Conti... 48 6e-05
Contig-U14174-1 (Contig-U14174-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U16504-1 (Contig-U16504-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U16074-1 (Contig-U16074-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U15333-1 (Contig-U15333-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U14931-1 (Contig-U14931-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U13565-1 (Contig-U13565-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U12284-1 (Contig-U12284-1Q) /CSM_Contig/Conti... 44 0.001

>Contig-U15754-1 (Contig-U15754-1Q) /CSM_Contig/Contig-U15754-1Q.Seq.d
Length = 2199

Score = 4125 bits (2081), Expect = 0.0
Identities = 2125/2132 (99%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggattttcattttcattttcatcacaataataatggaacaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggattttcattttcattttcatcacaataataatggaacaaaaaa 60


Query: 61 gattagatgattcattattaagaaattctgattggaagaattggggtacctatgtaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattagatgattcattattaagaaattctgattggaagaattggggtacctatgtaagtg 120


Query: 121 atagacaatgggcaactgttcgtgaagattatggtggtgaaccatggacctactttccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagacaatgggcaactgttcgtgaagattatggtggtgaaccatggacctactttccac 180


Query: 181 acgatcatgctagatcacgtgcatatagatggtcagaggatagtattggtggattttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgatcatgctagatcacgtgcatatagatggtcagaggatagtattggtggattttgta 240


Query: 241 atagatttcaaaatatttgtttaggtttagcattttggaatgaaaaagatccaattatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagatttcaaaatatttgtttaggtttagcattttggaatgaaaaagatccaattatta 300


Query: 301 aagagagattttttggacttggtggaccagaaggaaatcatggtgaagatgtaaaagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagagagattttttggacttggtggaccagaaggaaatcatggtgaagatgtaaaagaac 360


Query: 361 attatttctatttagataatacaccaacacattcctatgccaaaatgttatataaatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attatttctatttagataatacaccaacacattcctatgccaaaatgttatataaatatc 420


Query: 421 caatgaatgaatatccatatagtgatttagtatcaaccaatgcacaacgtggtaaacaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caatgaatgaatatccatatagtgatttagtatcaaccaatgcacaacgtggtaaacaag 480


Query: 481 atccagagtatgaaattgaagatactggtatctttgataaggatgaatatttcgattgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atccagagtatgaaattgaagatactggtatctttgataaggatgaatatttcgattgtt 540


Query: 541 acattgaatatgctaaaggagatcaagaagatgatattttatgtaaagttaccgtacata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acattgaatatgctaaaggagatcaagaagatgatattttatgtaaagttaccgtacata 600


Query: 601 atcgttcaacccgatagagaagcaaccattcatgtacttccacatctttggtatcgtaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcgttcaacccgatagagaagcaaccattcatgtacttccacatctttggtatcgtaat 660


Query: 661 acttggtcatggggttattcagatcgtcgtccatatattcatcgtcatacacataatcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acttggtcatggggttattcagatcgtcgtccatatattcatcgtcatacacataatcaa 720


Query: 721 ttggttagtgaagaagttcatattggtaaaagatattatatcgtggaaacatctgatgca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttggttagtgaagaagttcatattggtaaaagatattatatcgtggaaacatctgatgca 780


Query: 781 gcagcagcaacaggaaaaaagaannnnnnnnnntttagcttttcaaatgataccaatgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcagcagcaacaggaaaaaagaannnnnnnnnntttagcttttcaaatgataccaatgat 840


Query: 841 gttattagatattgaatggacaaaacgtcaattgattctaattactcgtgaatggtattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gttattagatattgaatggacaaaacgtcaattgattctaattactcgtgaatggtattc 900


Query: 901 tcattcaagtggtgcactttgcgcatatgaatgggattttggtgatgtaaatccaccagt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tcattcaagtggtgcactttgcgcatatgaatgggattttggtgatgtaaatccaccagt 960


Query: 961 acatgcatgggcaaccttggaagtctataaacatatagagaaaacaaccggtgttaaaga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 acatgcatgggcaaccttggaagtctataaacatatagagaaaacaaccggtgttaaaga 1020


Query: 1021 tatcgaatttttggagcaaattttccataaacttttattaaatttcacttggtgggtcaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tatcgaatttttggagcaaattttccataaacttttattaaatttcacttggtgggtcaa 1080


Query: 1081 taaaaaagatatcaaaggtaataacatttttgaaggtggtttcttaggtcttgataatat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 taaaaaagatatcaaaggtaataacatttttgaaggtggtttcttaggtcttgataatat 1140


Query: 1141 tggtgtattcgatagatcaacaccattgaaagatggtgctaaacttcaacaagccgatgg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tggtgtattcgatagatcaacaccattgaaagatggtgctaaacttcaacaagccgatgg 1200


Query: 1201 tacatcatggatggcattctatagtgccaatatgttgaaaatctccttgattttagcacg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tacatcatggatggcattctatagtgccaatatgttgaaaatctccttgattttagcacg 1260


Query: 1261 tgaaagaaactcttatgaatcaatcgccactaaattcctcgaacatttcattagcattgc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tgaaagaaactcttatgaatcaatcgccactaaattcctcgaacatttcattagcattgc 1320


Query: 1321 caagagtatcacctcaaaaactggtttatggagtaatgaggatggtttcttctttgattc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 caagagtatcacctcaaaaactggtttatggagtaatgaggatggtttcttctttgattc 1380


Query: 1381 aatcatttcaccaggttctcatcaacatcaactcaaagtctattcattcgttggtttaat 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 aatcatttcaccaggttctcatcaacatcaactcaaagtctattcattcgttggtttaat 1440


Query: 1441 accattgtttgctgctgaaattttggattatgatacacttcaagctttaccaaaattcaa 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 accattgtttgctgctgaaattttggattatgatacacttcaagctttaccaaaattcaa 1500


Query: 1501 agaacgtttggattggttcgtaaagtatagaccaaatttagtgaaaaacattgctccatt 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 agaacgtttggattggttcgtaaagtatagaccaaatttagtgaaaaacattgctccatt 1560


Query: 1561 cactgctttgggtcaaaataaatcacgtttactctcaattgtaaatcgtgagaaattgga 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 cactgctttgggtcaaaataaatcacgtttactctcaattgtaaatcgtgagaaattgga 1620


Query: 1621 attaatcttaaagaaaatgttggatgaagattggttcctctctgaaaatggtattagatc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 attaatcttaaagaaaatgttggatgaagattggttcctctctgaaaatggtattagatc 1680


Query: 1681 attatcaaaacatcacaaggatcatccattcacttttgctgagatggatgcttgtgttgg 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 attatcaaaacatcacaaggatcatccattcacttttgctgagatggatgcttgtgttgg 1740


Query: 1741 ttatgtacctggcgagagtgatgttcatatcatgggttcaaatagtaattggagaggtcc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ttatgtacctggcgagagtgatgttcatatcatgggttcaaatagtaattggagaggtcc 1800


Query: 1801 agtttggtttgccgtaaattatctcatgattcaatcacttcgtacctatcatgaatacta 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 agtttggtttgccgtaaattatctcatgattcaatcacttcgtacctatcatgaatacta 1860


Query: 1861 tggtgatgaattccaaattgaatatccaacaaactctggtaacctcgtaactttggatat 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 tggtgatgaattccaaattgaatatccaacaaactctggtaacctcgtaactttggatat 1920


Query: 1921 cgtagccgatgatatctctaaacgtctcattagtatcttccaagagaatcaagatggtac 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 cgtagccgatgatatctctaaacgtctcattagtatcttccaagagaatcaagatggtac 1980


Query: 1981 tagaaaatttgctggtggtaaaccaattttcgcnnnnnnncattggaaagatcatatatt 2040
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1981 tagaaaatttgctggtggtaaaccaattttcgcaaaaaaacattggaaagatcatatatt 2040


Query: 2041 gttcaatgaatatttccatggtgatagtggtgctggtcttggtgcttctcaccagactgg 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 gttcaatgaatatttccatggtgatagtggtgctggtcttggtgcttctcaccagactgg 2100


Query: 2101 ttggactgccttggtcgccaagttaattaatg 2132
||||||||||||||||||||||||||||||||
Sbjct: 2101 ttggactgccttggtcgccaagttaattaatg 2132


>Contig-U13964-1 (Contig-U13964-1Q) /CSM_Contig/Contig-U13964-1Q.Seq.d
Length = 1300

Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggattttcatt 26
||||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggattttcatt 26


>Contig-U14188-1 (Contig-U14188-1Q) /CSM_Contig/Contig-U14188-1Q.Seq.d
Length = 2091

Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggattttca 24
||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggattttca 24


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 33,603
Number of Sequences: 8402
Number of extensions: 33603
Number of successful extensions: 4138
Number of sequences better than 10.0: 688
length of query: 2199
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2182
effective length of database: 7,932,708
effective search space: 17309168856
effective search space used: 17309168856
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2.14
Homology vs DNA
Query= Contig-U15754-1 (Contig-U15754-1Q) /CSM_Contig/Contig-U15754-1Q.Seq.d
(2199 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ436861) Dictyostelium discoideum cDNA clone:ddv32p08, 3' ... 1320 0.0 3
(BJ445064) Dictyostelium discoideum cDNA clone:ddv58h07, 3' ... 1306 0.0 3
(BJ436377) Dictyostelium discoideum cDNA clone:ddv31a04, 3' ... 1275 0.0 2
(BJ443013) Dictyostelium discoideum cDNA clone:ddv51k17, 3' ... 1273 0.0 3
(BJ437628) Dictyostelium discoideum cDNA clone:ddv34i21, 3' ... 1273 0.0 4
(BJ437338) Dictyostelium discoideum cDNA clone:ddv33o20, 3' ... 1273 0.0 2
(BJ441667) Dictyostelium discoideum cDNA clone:ddv47o10, 3' ... 1269 0.0 2
(BJ438604) Dictyostelium discoideum cDNA clone:ddv37n08, 3' ... 1267 0.0 3
(BJ351160) Dictyostelium discoideum cDNA clone:dda42b09, 3' ... 1267 0.0 2
(BJ444959) Dictyostelium discoideum cDNA clone:ddv58b05, 3' ... 1265 0.0 3
(BJ444456) Dictyostelium discoideum cDNA clone:ddv56n09, 3' ... 1265 0.0 3
(BJ436752) Dictyostelium discoideum cDNA clone:ddv32j06, 3' ... 1265 0.0 3
(BJ350833) Dictyostelium discoideum cDNA clone:dda41m04, 3' ... 1265 0.0 2
(BJ446100) Dictyostelium discoideum cDNA clone:ddv61l16, 3' ... 1263 0.0 2
(BJ437655) Dictyostelium discoideum cDNA clone:ddv34o20, 3' ... 1263 0.0 3
(BJ427204) Dictyostelium discoideum cDNA clone:ddv61l16, 5' ... 1261 0.0 1
(BJ364491) Dictyostelium discoideum cDNA clone:ddc31m23, 5' ... 1259 0.0 1
(BJ425833) Dictyostelium discoideum cDNA clone:ddv57a12, 5' ... 1241 0.0 1
(BJ443518) Dictyostelium discoideum cDNA clone:ddv53m06, 3' ... 1209 0.0 3
(BJ424852) Dictyostelium discoideum cDNA clone:ddv53e22, 5' ... 1178 0.0 1
(BJ420347) Dictyostelium discoideum cDNA clone:ddv39c02, 5' ... 1178 0.0 2
(BJ437161) Dictyostelium discoideum cDNA clone:ddv33k12, 3' ... 1176 0.0 2
(BJ422181) Dictyostelium discoideum cDNA clone:ddv45j04, 5' ... 1172 0.0 2
(BJ442388) Dictyostelium discoideum cDNA clone:ddv49p15, 3' ... 1168 0.0 2
(BJ438254) Dictyostelium discoideum cDNA clone:ddv36i23, 3' ... 1166 0.0 2
(BJ424793) Dictyostelium discoideum cDNA clone:ddv53i14, 5' ... 1166 0.0 2
(BJ419070) Dictyostelium discoideum cDNA clone:ddv34o20, 5' ... 1166 0.0 2
(BJ418609) Dictyostelium discoideum cDNA clone:ddv33k12, 5' ... 1166 0.0 1
(BJ333010) Dictyostelium discoideum cDNA clone:dda41m04, 5' ... 1166 0.0 2
(BJ424669) Dictyostelium discoideum cDNA clone:ddv53m06, 5' ... 1162 0.0 1
(BJ441475) Dictyostelium discoideum cDNA clone:ddv46g23, 3' ... 1158 0.0 2
(BJ443638) Dictyostelium discoideum cDNA clone:ddv53i14, 3' ... 1154 0.0 2
(BJ425677) Dictyostelium discoideum cDNA clone:ddv56a17, 5' ... 1154 0.0 2
(BJ420640) Dictyostelium discoideum cDNA clone:ddv39p19, 5' ... 1154 0.0 2
(BJ419682) Dictyostelium discoideum cDNA clone:ddv36i23, 5' ... 1154 0.0 2
(BJ422081) Dictyostelium discoideum cDNA clone:ddv44d24, 5' ... 1150 0.0 2
(BJ425970) Dictyostelium discoideum cDNA clone:ddv57n15, 5' ... 1142 0.0 1
(BJ422449) Dictyostelium discoideum cDNA clone:ddv45o23, 5' ... 1142 0.0 1
(BJ419854) Dictyostelium discoideum cDNA clone:ddv37n08, 5' ... 1142 0.0 1
(BJ419044) Dictyostelium discoideum cDNA clone:ddv34i21, 5' ... 1142 0.0 2
(BJ439280) Dictyostelium discoideum cDNA clone:ddv39p19, 3' ... 1140 0.0 3
(BJ425659) Dictyostelium discoideum cDNA clone:ddv56n09, 5' ... 1140 0.0 1
(BJ422916) Dictyostelium discoideum cDNA clone:ddv47o10, 5' ... 1140 0.0 2
(BJ418353) Dictyostelium discoideum cDNA clone:ddv32p08, 5' ... 1140 0.0 1
(BJ418247) Dictyostelium discoideum cDNA clone:ddv32j06, 5' ... 1140 0.0 2
(BJ422717) Dictyostelium discoideum cDNA clone:ddv46g23, 5' ... 1138 0.0 1
(BJ426127) Dictyostelium discoideum cDNA clone:ddv58b05, 5' ... 1136 0.0 2
(BJ424685) Dictyostelium discoideum cDNA clone:ddv53a09, 5' ... 1134 0.0 1
(BJ424223) Dictyostelium discoideum cDNA clone:ddv51d21, 5' ... 1134 0.0 1
(BJ420701) Dictyostelium discoideum cDNA clone:ddv40l01, 5' ... 1134 0.0 2
(BJ420785) Dictyostelium discoideum cDNA clone:ddv40n08, 5' ... 1132 0.0 2
(BJ417708) Dictyostelium discoideum cDNA clone:ddv28d15, 5' ... 1132 0.0 1
(BJ424180) Dictyostelium discoideum cDNA clone:ddv51k17, 5' ... 1130 0.0 2
(BJ443531) Dictyostelium discoideum cDNA clone:ddv53a09, 3' ... 1126 0.0 2
(BJ417899) Dictyostelium discoideum cDNA clone:ddv31a04, 5' ... 1124 0.0 1
(BJ443693) Dictyostelium discoideum cDNA clone:ddv53e22, 3' ... 1122 0.0 3
(BJ426687) Dictyostelium discoideum cDNA clone:ddv59k24, 5' ... 1114 0.0 2
(BJ426239) Dictyostelium discoideum cDNA clone:ddv58h07, 5' ... 1114 0.0 1
(BJ423585) Dictyostelium discoideum cDNA clone:ddv49p15, 5' ... 1114 0.0 1
(BJ443060) Dictyostelium discoideum cDNA clone:ddv51d21, 3' ... 1112 0.0 2
(BJ439427) Dictyostelium discoideum cDNA clone:ddv40n08, 3' ... 1112 0.0 2
(BJ438958) Dictyostelium discoideum cDNA clone:ddv39c02, 3' ... 1090 0.0 2
(BJ444866) Dictyostelium discoideum cDNA clone:ddv57n15, 3' ... 1088 0.0 3
(BJ445568) Dictyostelium discoideum cDNA clone:ddv59k24, 3' ... 1070 0.0 3
(BJ426441) Dictyostelium discoideum cDNA clone:ddv59b02, 5' ... 1065 0.0 3
(BJ444473) Dictyostelium discoideum cDNA clone:ddv56a17, 3' ... 1043 0.0 4
(BJ444714) Dictyostelium discoideum cDNA clone:ddv57a12, 3' ... 1039 0.0 4
(BJ378431) Dictyostelium discoideum cDNA clone:ddc31m23, 3' ... 1039 0.0 3
(BJ440891) Dictyostelium discoideum cDNA clone:ddv45e04, 3' ... 1027 0.0 2
(BJ365444) Dictyostelium discoideum cDNA clone:ddc35l10, 5' ... 999 0.0 2
(BJ379603) Dictyostelium discoideum cDNA clone:ddc35l10, 3' ... 995 0.0 4
(BJ439340) Dictyostelium discoideum cDNA clone:ddv40l01, 3' ... 967 0.0 2
(BJ357103) Dictyostelium discoideum cDNA clone:dda62p08, 3' ... 963 0.0 2
(BJ439818) Dictyostelium discoideum cDNA clone:ddv41o18, 3' ... 942 0.0 2
(BJ441077) Dictyostelium discoideum cDNA clone:ddv45i13, 3' ... 934 0.0 3
(BJ440024) Dictyostelium discoideum cDNA clone:ddv42l08, 3' ... 894 0.0 3
(BJ422158) Dictyostelium discoideum cDNA clone:ddv45e04, 5' ... 842 0.0 2
(BJ333316) Dictyostelium discoideum cDNA clone:dda42b09, 5' ... 644 0.0 2
(BJ418773) Dictyostelium discoideum cDNA clone:ddv33o20, 5' ... 1053 0.0 2
(BJ445276) Dictyostelium discoideum cDNA clone:ddv59b02, 3' ... 969 0.0 3
(BJ422337) Dictyostelium discoideum cDNA clone:ddv45i13, 5' ... 1074 0.0 1
(BJ440804) Dictyostelium discoideum cDNA clone:ddv44d24, 3' ... 866 0.0 2
(BJ421369) Dictyostelium discoideum cDNA clone:ddv42l08, 5' ... 1037 0.0 1
(BJ421098) Dictyostelium discoideum cDNA clone:ddv41o18, 5' ... 989 0.0 1
(BJ441193) Dictyostelium discoideum cDNA clone:ddv45o23, 3' ... 791 0.0 2
(BJ440919) Dictyostelium discoideum cDNA clone:ddv45j04, 3' ... 757 0.0 2
(C23714) Dictyostelium discoideum gamete cDNA, clone FC-AB14. 870 0.0 1
(BJ435818) Dictyostelium discoideum cDNA clone:ddv28d15, 3' ... 791 0.0 1
(C23715) Dictyostelium discoideum gamete cDNA, clone FC-AB14. 502 0.0 5
(BJ424367) Dictyostelium discoideum cDNA clone:ddv52p03, 5' ... 359 3e-94 1
(DJ131410) Method for identification of useful proteins deri... 74 1e-26 3
(AR546234) Sequence 1365 from patent US 6747137. 48 2e-26 8
(AL426224) clone BA0AB011E05 of library BA0AB from strain CL... 62 2e-13 4
(AL396096) T7 end of clone AR0AA028B06 of library AR0AA from... 72 1e-11 2
(BH394410) AG-ND-150M18.TR ND-TAM Anopheles gambiae genomic ... 68 5e-10 3
(DJ207446) Method for identification of useful proteins deri... 54 6e-10 4
(CP000393) Trichodesmium erythraeum IMS101, complete genome. 72 8e-10 2
(BX908798) Parachlamydia-related symbiont UWE25, complete ge... 52 7e-09 2
(CR380954) Candida glabrata strain CBS138 chromosome H compl... 60 2e-08 2
(CR380958) Candida glabrata strain CBS138 chromosome L compl... 52 3e-08 2
(DQ331173) Synthetic construct Saccharomyces cerevisiae clon... 54 1e-07 3
(AP009552) Microcystis aeruginosa NIES-843 DNA, complete gen... 48 1e-06 2
(AL439056) T3 end of clone BD0AA002B09 of library BD0AA from... 68 2e-06 1
(EC757313) PPE00008939 Agencourt Biosciences Agen-0020 Non-n... 52 7e-06 2
(CP000117) Anabaena variabilis ATCC 29413, complete genome. 52 7e-06 2
(Z47815) S.cerevisiae chromosome XIII cosmid 9646. 54 9e-06 4
(AL440335) T3 end of clone BD0AA011F08 of library BD0AA from... 52 2e-05 2
(AL439899) T7 end of clone BD0AA008F10 of library BD0AA from... 52 2e-05 2
(AR546235) Sequence 1366 from patent US 6747137. 46 3e-05 3
(AL439900) T3 end of clone BD0AA008F10 of library BD0AA from... 60 8e-05 2
(CR382122) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 62 9e-05 1
(FC852052) CBHN7153.fwd CBHN Metridium senile tentacle Metri... 42 4e-04 2
(AZ932125) 474.dhz95a05.s1 Saccharomyces unisporus NRRL Y-15... 42 6e-04 2
(BZ298554) CG4251.r1 Candida glabrata Random Genomic Library... 50 0.003 3
(CR382136) Debaryomyces hansenii strain CBS767 chromosome A ... 40 0.004 2
(AR551978) Sequence 7109 from patent US 6747137. 56 0.006 1
(EK467374) 1095469430370 Global-Ocean-Sampling_GS-32-01-01-1... 56 0.006 1
(EH303888) UAHYP_15B_F_D09 UaHyphae_ARS Uromyces appendicula... 50 0.011 2
(EH303874) UAHYP_15B_R_D09 UaHyphae_ARS Uromyces appendicula... 50 0.011 2
(CJ472022) Macaca fascicularis mRNA, clone: QorA-11761, 5' e... 50 0.017 3
(DJ025881) Genome-wide DNA marker of Saccharomyces cerevisiae. 54 0.023 1
(AC132582) Mus musculus BAC clone RP24-319N10 from chromosom... 52 0.091 1
(AC124420) Mus musculus BAC clone RP24-322N8 from chromosome... 52 0.091 1
(BJ416412) Dictyostelium discoideum cDNA clone:ddv26i10, 5' ... 52 0.091 1
(BJ327473) Dictyostelium discoideum cDNA clone:dda20g13, 5' ... 52 0.091 1
(FK075547) XABT133219.b1 Gateway compatible cien cDNA librar... 40 0.13 3
(BJ415765) Dictyostelium discoideum cDNA clone:ddv23l15, 5' ... 48 0.13 2
(BJ415797) Dictyostelium discoideum cDNA clone:ddv23d21, 5' ... 44 0.14 2
(EA701188) Sequence 80067 from patent US 7365185. 40 0.17 2
(GE294692) CCAH3343.b1 CCAH Trichoderma atroviride mycoparas... 36 0.17 3
(CJ483811) Macaca fascicularis mRNA, clone: QtsA-11325, 5' e... 44 0.18 2
(BX070438) Single read from an extremity of a full-length cD... 50 0.36 1
(BX062551) Single read from an extremity of a full-length cD... 50 0.36 1
(EH301394) UAHYP_11B_F_D05 UaHyphae_ARS Uromyces appendicula... 50 0.36 1
(EH301393) UAHYP_11B_R_D05 UaHyphae_ARS Uromyces appendicula... 50 0.36 1
(CJ466344) Macaca fascicularis mRNA, clone: QnpA-15702, 5' e... 50 0.36 1
(CP000903) Bacillus weihenstephanensis KBAB4, complete genome. 50 0.36 1
(CP000383) Cytophaga hutchinsonii ATCC 33406, complete genome. 50 0.36 1
(BJ327260) Dictyostelium discoideum cDNA clone:dda19e21, 5' ... 44 0.39 3
(BJ326603) Dictyostelium discoideum cDNA clone:dda17m03, 5' ... 38 0.45 3
(CT531541) A BAC library has been constructed from cultivar ... 40 0.52 2
(FK089205) XABT141822.b1 Gateway compatible cien cDNA librar... 38 0.55 3
(BJ369911) Dictyostelium discoideum cDNA clone:ddc52p10, 5' ... 46 0.56 2
(BJ333478) Dictyostelium discoideum cDNA clone:dda42k24, 5' ... 48 0.58 2
(BJ439871) Dictyostelium discoideum cDNA clone:ddv41l24, 3' ... 44 0.59 2
(CJ483451) Macaca fascicularis mRNA, clone: QtsA-10935, 5' e... 48 0.66 2
(EK529968) 1095516005675 Global-Ocean-Sampling_GS-32-01-01-1... 44 0.79 2
(BX649520) Zebrafish DNA sequence from clone DKEY-174E3 in l... 48 1.4 1
(AJ296703) Picea abies ATC microsatellite DNA, clone EATC1F03B. 48 1.4 1
(FB701774) Sequence 1 from Patent WO2007126975. 48 1.4 1
(EJ950085) 1093018939081 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.4 1
(EJ949580) 1093018935817 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.4 1
(CE001857) tigr-gss-dog-17000320814479 Dog Library Canis lup... 48 1.4 1
(EG404801) SAAH-aab90a08.b1 Agen 0058 Schmidtea mediterranea... 48 1.4 1
(DT319968) SusFleck_BF_0017_0020_5_pCNS_P11 SusFleck Backfat... 48 1.4 1
(CJ491411) Macaca fascicularis mRNA, clone: QtsA-19344, 5' e... 48 1.4 1
(CJ485159) Macaca fascicularis mRNA, clone: QtsA-12732, 5' e... 48 1.4 1
(CJ481514) Macaca fascicularis mRNA, clone: QtrA-17205, 5' e... 48 1.4 1
(CJ471987) Macaca fascicularis mRNA, clone: QorA-11725, 5' e... 48 1.4 1
(CJ470622) Macaca fascicularis mRNA, clone: QorA-10156, 5' e... 48 1.4 1
(CJ458788) Macaca fascicularis mRNA, clone: QmoA-10854, 5' e... 48 1.4 1
(CJ456443) Macaca fascicularis mRNA, clone: QflA-22276, 5' e... 48 1.4 1
(CJ445237) Macaca fascicularis mRNA, clone: QflA-10370, 5' e... 48 1.4 1
(CJ445222) Macaca fascicularis mRNA, clone: QflA-10355, 5' e... 48 1.4 1
(BJ417243) Dictyostelium discoideum cDNA clone:ddv29p21, 5' ... 48 1.4 1
(BJ415751) Dictyostelium discoideum cDNA clone:ddv23i15, 5' ... 48 1.4 1
(BJ411460) Dictyostelium discoideum cDNA clone:ddv4e13, 5' e... 48 1.4 1
(CP000880) Salmonella enterica subsp. arizonae serovar 62:z4... 48 1.4 1
(CP000394) Granulibacter bethesdensis CGDNIH1, complete genome. 48 1.4 1
(BJ326331) Dictyostelium discoideum cDNA clone:dda16h06, 5' ... 44 1.8 2
(CJ440540) Macaca fascicularis mRNA, clone: QccE-17862, 5' e... 40 2.3 2
(CI254760) Oryza sativa Japonica Group cDNA, clone: 044-M052... 36 2.4 2
(AR383482) Sequence 211 from patent US 6610836. 40 2.5 2
(CJ486772) Macaca fascicularis mRNA, clone: QtsA-14413, 5' e... 40 2.5 2
(CJ483315) Macaca fascicularis mRNA, clone: QtsA-10780, 5' e... 44 2.6 2
(CJ487163) Macaca fascicularis mRNA, clone: QtsA-14820, 5' e... 44 2.6 2
(CJ467776) Macaca fascicularis mRNA, clone: QnpA-17370, 5' e... 36 2.6 2
(CJ430661) Macaca fascicularis mRNA, clone: QbsA-10590, 5' e... 36 2.6 2
(AM206260) Paracentrotus lividus EST, clone MPMGp1172P178Q, ... 36 2.6 3
(CJ454597) Macaca fascicularis mRNA, clone: QflA-20344, 5' e... 42 2.6 2
(CJ445571) Macaca fascicularis mRNA, clone: QflA-10720, 5' e... 44 2.7 2
(CJ489678) Macaca fascicularis mRNA, clone: QtsA-17439, 5' e... 46 2.7 2
(CJ444926) Macaca fascicularis mRNA, clone: QflA-10047, 5' e... 44 2.7 2
(BH163961) ENTPY41TFB Entamoeba histolytica Sheared DNA Enta... 34 3.1 3
(BH148604) ENTPM26TF Entamoeba histolytica Sheared DNA Entam... 34 3.1 3
(AV157088) Mus musculus 12-day embryo head cDNA, partial seq... 40 3.1 2
(BJ338465) Dictyostelium discoideum cDNA clone:dda61k13, 5' ... 44 3.4 2
(FK075548) XABT133219.g1 Gateway compatible cien cDNA librar... 36 3.8 2
(BX044666) Single read from an extremity of a full-length cD... 36 3.9 3
(FK115599) XABT159169.b1 Gateway compatible cien cDNA librar... 34 4.7 3
(BJ416311) Dictyostelium discoideum cDNA clone:ddv25a24, 5' ... 40 4.8 3
(BW052551) Ciona intestinalis cDNA, clone:cibd075m20, 5' end... 34 5.0 3
(G86075) S209P6154FG9.T0 C3H/HeJ Mus musculus STS genomic, s... 46 5.6 1
(AC132844) Mus musculus chromosome 17, clone RP24-481P13, co... 46 5.6 1
(AC130283) Mus musculus chromosome 15, clone RP23-136E18, co... 46 5.6 1
(AC194986) Pan troglodytes BAC clone CH251-658D13 from chrom... 46 5.6 1
(BD101202) Novel genes cloned in humanneuroblastoma and frag... 46 5.6 1
(BD100162) Novel genes cloned in humanneuroblastoma and frag... 46 5.6 1
(BD021264) Novel gene and novel gene fragment cloned in huma... 46 5.6 1
(BD020224) Novel gene and novel gene fragment cloned in huma... 46 5.6 1
(AC090989) Homo sapiens chromosome 18, clone RP11-265C19, co... 46 5.6 1
(AC079163) Homo sapiens BAC clone RP11-707K3 from 2, complet... 46 5.6 1
(AC073597) Homo sapiens Xp BAC RP11-793P1 (Roswell Park Canc... 46 5.6 1
(AC010798) Homo sapiens, clone RP11-470B24, complete sequence. 46 5.6 1
(AC004827) Homo sapiens PAC clone RP1-44L15 from Xq23, compl... 46 5.6 1
(AC149725) Bos taurus clone CH240-165A20, WORKING DRAFT SEQU... 46 5.6 1
(AC131606) Rattus norvegicus clone CH230-2H20, *** SEQUENCIN... 46 5.6 1
(AC097154) Rattus norvegicus clone CH230-217G16, *** SEQUENC... 46 5.6 1
(CU929622) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.6 1
(CU928898) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.6 1
(CU855863) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.6 1
(AP001203) Homo sapiens genomic DNA, chromosome 18q12 clone:... 46 5.6 1
(AC182056) Bos taurus clone CH240-343L22, WORKING DRAFT SEQU... 46 5.6 1
(AC179197) Strongylocentrotus purpuratus clone R3-4019G13, W... 46 5.6 1
(AC177493) Strongylocentrotus purpuratus clone R3-1027N13, W... 46 5.6 1
(AC177038) Strongylocentrotus purpuratus clone R3-38L2, WORK... 46 5.6 1
(AC175926) Strongylocentrotus purpuratus clone R3-15M23, WOR... 46 5.6 1
(AC175879) Strongylocentrotus purpuratus clone R3-15D21, WOR... 46 5.6 1
(AC175870) Strongylocentrotus purpuratus clone R3-15F19, WOR... 46 5.6 1
(AC172690) Bos taurus clone CH240-212G5, WORKING DRAFT SEQUE... 46 5.6 1
(AC169113) Bos taurus clone CH240-216N14, WORKING DRAFT SEQU... 46 5.6 1
(AC025045) Homo sapiens chromosome N/A clone RP11-265C19, 21... 46 5.6 1
(BX061427) Single read from an extremity of a full-length cD... 46 5.6 1
(BX043166) Single read from an extremity of a full-length cD... 46 5.6 1
(BX037488) Single read from an extremity of a full-length cD... 46 5.6 1
(CL365735) RPCI44_355B7.r RPCI-44 Sus scrofa genomic clone R... 46 5.6 1
(DY909307) CHAX4231.b1_M01.ab1 CHA(XYZ) common wild sunflowe... 46 5.6 1
(DT110679) JGI_ANNO993.rev ANNO Pimephales promelas Whole (M... 46 5.6 1
(DC241670) Petunia x hybrida cDNA, clone: PET04SEQ04905C. 46 5.6 1
(DC240305) Petunia x hybrida cDNA, clone: PET04SEQ01306A. 46 5.6 1
(DC121408) Xenopus laevis NBRP cDNA clone:xl294a08, 5' end. 46 5.6 1
(DC120502) Xenopus laevis NBRP cDNA clone:xl290j10, 5' end. 46 5.6 1
(DC105262) Xenopus laevis NBRP cDNA clone:xl238i11, 5' end. 46 5.6 1
(CK206190) FGAS017769 Triticum aestivum FGAS: Library 5 GATE... 46 5.6 1
(CJ491751) Macaca fascicularis mRNA, clone: QtsA-19701, 5' e... 46 5.6 1
(CJ488409) Macaca fascicularis mRNA, clone: QtsA-16118, 5' e... 46 5.6 1
(CJ487050) Macaca fascicularis mRNA, clone: QtsA-14703, 5' e... 46 5.6 1
(CJ486404) Macaca fascicularis mRNA, clone: QtsA-14029, 5' e... 46 5.6 1
(CJ486196) Macaca fascicularis mRNA, clone: QtsA-13813, 5' e... 46 5.6 1
(CJ486116) Macaca fascicularis mRNA, clone: QtsA-13729, 5' e... 46 5.6 1
(CJ485374) Macaca fascicularis mRNA, clone: QtsA-12955, 5' e... 46 5.6 1
(CJ484985) Macaca fascicularis mRNA, clone: QtsA-12550, 5' e... 46 5.6 1
(CJ484357) Macaca fascicularis mRNA, clone: QtsA-11892, 5' e... 46 5.6 1
(CJ483575) Macaca fascicularis mRNA, clone: QtsA-11063, 5' e... 46 5.6 1
(CJ483301) Macaca fascicularis mRNA, clone: QtsA-10765, 5' e... 46 5.6 1
(CJ482810) Macaca fascicularis mRNA, clone: QtsA-10211, 5' e... 46 5.6 1
(CJ482474) Macaca fascicularis mRNA, clone: QtrA-18524, 5' e... 46 5.6 1
(CJ482090) Macaca fascicularis mRNA, clone: QtrA-17889, 5' e... 46 5.6 1
(CJ481993) Macaca fascicularis mRNA, clone: QtrA-17766, 5' e... 46 5.6 1
(CJ481984) Macaca fascicularis mRNA, clone: QtrA-17755, 5' e... 46 5.6 1
(CJ480925) Macaca fascicularis mRNA, clone: QtrA-16503, 5' e... 46 5.6 1
(CJ480663) Macaca fascicularis mRNA, clone: QtrA-16193, 5' e... 46 5.6 1
(CJ479293) Macaca fascicularis mRNA, clone: QtrA-14542, 5' e... 46 5.6 1
(CJ479245) Macaca fascicularis mRNA, clone: QtrA-14481, 5' e... 46 5.6 1
(CJ479007) Macaca fascicularis mRNA, clone: QtrA-14212, 5' e... 46 5.6 1
(CJ478910) Macaca fascicularis mRNA, clone: QtrA-14107, 5' e... 46 5.6 1
(CJ477593) Macaca fascicularis mRNA, clone: QtrA-12444, 5' e... 46 5.6 1
(CJ477490) Macaca fascicularis mRNA, clone: QtrA-12329, 5' e... 46 5.6 1
(CJ477236) Macaca fascicularis mRNA, clone: QtrA-12033, 5' e... 46 5.6 1
(CJ476760) Macaca fascicularis mRNA, clone: QtrA-11230, 5' e... 46 5.6 1
(CJ476478) Macaca fascicularis mRNA, clone: QtrA-10820, 5' e... 46 5.6 1
(CJ474827) Macaca fascicularis mRNA, clone: QorA-15004, 5' e... 46 5.6 1
(CJ474020) Macaca fascicularis mRNA, clone: QorA-14088, 5' e... 46 5.6 1
(CJ472516) Macaca fascicularis mRNA, clone: QorA-12348, 5' e... 46 5.6 1
(CJ472003) Macaca fascicularis mRNA, clone: QorA-11742, 5' e... 46 5.6 1
(CJ471903) Macaca fascicularis mRNA, clone: QorA-11631, 5' e... 46 5.6 1
(CJ468511) Macaca fascicularis mRNA, clone: QnpA-18378, 5' e... 46 5.6 1
(CJ467536) Macaca fascicularis mRNA, clone: QnpA-17066, 5' e... 46 5.6 1
(CJ466994) Macaca fascicularis mRNA, clone: QnpA-16420, 5' e... 46 5.6 1
(CJ466666) Macaca fascicularis mRNA, clone: QnpA-16061, 5' e... 46 5.6 1
(CJ466487) Macaca fascicularis mRNA, clone: QnpA-15858, 5' e... 46 5.6 1
(CJ466427) Macaca fascicularis mRNA, clone: QnpA-15790, 5' e... 46 5.6 1
(CJ464014) Macaca fascicularis mRNA, clone: QnpA-12622, 5' e... 46 5.6 1
(CJ463319) Macaca fascicularis mRNA, clone: QnpA-11520, 5' e... 46 5.6 1
(CJ462715) Macaca fascicularis mRNA, clone: QnpA-10386, 5' e... 46 5.6 1
(CJ461454) Macaca fascicularis mRNA, clone: QmoA-14384, 5' e... 46 5.6 1
(CJ459425) Macaca fascicularis mRNA, clone: QmoA-11640, 5' e... 46 5.6 1
(CJ459191) Macaca fascicularis mRNA, clone: QmoA-11341, 5' e... 46 5.6 1
(CJ458991) Macaca fascicularis mRNA, clone: QmoA-11105, 5' e... 46 5.6 1
(CJ458582) Macaca fascicularis mRNA, clone: QmoA-10606, 5' e... 46 5.6 1
(CJ455435) Macaca fascicularis mRNA, clone: QflA-21219, 5' e... 46 5.6 1
(CJ454216) Macaca fascicularis mRNA, clone: QflA-19947, 5' e... 46 5.6 1
(CJ453991) Macaca fascicularis mRNA, clone: QflA-19714, 5' e... 46 5.6 1
(CJ453231) Macaca fascicularis mRNA, clone: QflA-18922, 5' e... 46 5.6 1
(CJ450720) Macaca fascicularis mRNA, clone: QflA-16294, 5' e... 46 5.6 1
(CJ450374) Macaca fascicularis mRNA, clone: QflA-15933, 5' e... 46 5.6 1
(CJ450310) Macaca fascicularis mRNA, clone: QflA-15862, 5' e... 46 5.6 1
(CJ450004) Macaca fascicularis mRNA, clone: QflA-15544, 5' e... 46 5.6 1
(CJ449562) Macaca fascicularis mRNA, clone: QflA-15082, 5' e... 46 5.6 1
(CJ449492) Macaca fascicularis mRNA, clone: QflA-15012, 5' e... 46 5.6 1
(CJ449198) Macaca fascicularis mRNA, clone: QflA-14706, 5' e... 46 5.6 1
(CJ448325) Macaca fascicularis mRNA, clone: QflA-13692, 5' e... 46 5.6 1
(CJ448234) Macaca fascicularis mRNA, clone: QflA-13601, 5' e... 46 5.6 1
(CJ447832) Macaca fascicularis mRNA, clone: QflA-13179, 5' e... 46 5.6 1
(CJ447435) Macaca fascicularis mRNA, clone: QflA-12765, 5' e... 46 5.6 1
(CJ446726) Macaca fascicularis mRNA, clone: QflA-12028, 5' e... 46 5.6 1
(CJ446687) Macaca fascicularis mRNA, clone: QflA-11985, 5' e... 46 5.6 1
(CJ445161) Macaca fascicularis mRNA, clone: QflA-10290, 5' e... 46 5.6 1
(CJ444268) Macaca fascicularis mRNA, clone: QccE-21860, 5' e... 46 5.6 1
(CJ443591) Macaca fascicularis mRNA, clone: QccE-21155, 5' e... 46 5.6 1
(CJ442423) Macaca fascicularis mRNA, clone: QccE-19938, 5' e... 46 5.6 1
(CJ442223) Macaca fascicularis mRNA, clone: QccE-19729, 5' e... 46 5.6 1
(CJ439009) Macaca fascicularis mRNA, clone: QccE-16256, 5' e... 46 5.6 1
(CJ436250) Macaca fascicularis mRNA, clone: QccE-13335, 5' e... 46 5.6 1
(CJ432123) Macaca fascicularis mRNA, clone: QbsB-10607, 5' e... 46 5.6 1
(CI280958) Oryza sativa Japonica Group cDNA, clone: 083-M120... 46 5.6 1
(CI173617) Oryza sativa Japonica Group cDNA, clone: 033-M079... 46 5.6 1
(CI034432) Oryza sativa Japonica Group cDNA, clone: 009-M122... 46 5.6 1
(CI031819) Oryza sativa Japonica Group cDNA, clone: 009-M091... 46 5.6 1
(CI031425) Oryza sativa Japonica Group cDNA, clone: 009-M087... 46 5.6 1
(BJ387309) Dictyostelium discoideum cDNA clone:dds1e16, 5' e... 46 5.6 1
(BJ363400) Dictyostelium discoideum cDNA clone:ddc26o08, 5' ... 46 5.6 1
(EY145395) CBTH9870.g1_K20.ab1:P Triphysaria pusilla root ti... 46 5.6 1
(U62007) Serratia marcescens IncHI2 plasmid R478 RepHI1A(R4... 46 5.6 1
(EF382672) Klebsiella pneumoniae strain NK29 plasmid pK29, c... 46 5.6 1
(BX664015) Serratia marcescens plasmid R478. 46 5.6 1
(AE016877) Bacillus cereus ATCC 14579, complete genome. 46 5.6 1
(BJ389039) Dictyostelium discoideum cDNA clone:dds17b09, 5' ... 42 6.2 2
(AC176530) Strongylocentrotus purpuratus clone R3-3075J19, W... 40 6.2 7
(BZ389669) EINBS89TF EI_10_12_KB Entamoeba invadens genomic ... 42 6.8 2
(BJ418709) Dictyostelium discoideum cDNA clone:ddv33p17, 5' ... 36 6.9 2
(BH135495) ENTNS07TR Entamoeba histolytica Sheared DNA Entam... 34 7.2 3
(AM285308) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 7.2 6
(EG352426) SAAH-aad23d05.b1 Agen 0058 Schmidtea mediterranea... 36 7.4 2
(BJ335268) Dictyostelium discoideum cDNA clone:dda49g15, 5' ... 44 7.7 2
(EG407647) SAAH-aac48g01.b1 Agen 0058 Schmidtea mediterranea... 36 7.9 2
(EG411270) SAAH-aaa78c11.b1 Agen 0058 Schmidtea mediterranea... 36 7.9 2
(AM615485) Entamoeba invadens IP1 GSS, clone inv062e12.q1k. 42 8.1 2
(AC180278) Strongylocentrotus purpuratus clone R3-3008N14, W... 42 8.3 6
(EG350109) SAAH-aad08h04.b1 Agen 0058 Schmidtea mediterranea... 36 8.4 2
(AC146708) Medicago truncatula chromosome 8 clone mth2-80a22... 36 8.7 9
(AM614425) Entamoeba invadens IP1 GSS, clone inv048e10.q1k. 42 8.8 2
(BZ394444) EINAV90TR EI_10_12_KB Entamoeba invadens genomic ... 42 8.9 2
(BW480696) Ciona intestinalis cDNA, clone:cima038j05, 5'end,... 34 8.9 3
(CJ450668) Macaca fascicularis mRNA, clone: QflA-16242, 5' e... 40 9.0 3
(BJ371559) Dictyostelium discoideum cDNA clone:ddc58d17, 5' ... 38 9.0 2
(AM601416) Entamoeba invadens IP1 GSS, clone inv008a10.q1k. 42 9.1 2
(BZ395053) EINBO94TF EI_10_12_KB Entamoeba invadens genomic ... 42 9.1 2
(AM617681) Entamoeba invadens IP1 GSS, clone inv100h11.q1k. 42 9.2 2
(CJ465746) Macaca fascicularis mRNA, clone: QnpA-14877, 5' e... 42 9.2 2
(BZ387428) EINBG50TF EI_10_12_KB Entamoeba invadens genomic ... 42 9.2 2
(CJ437799) Macaca fascicularis mRNA, clone: QccE-14983, 5' e... 44 9.3 2
(CJ465245) Macaca fascicularis mRNA, clone: QnpA-14301, 5' e... 40 9.3 2
(BZ386596) EINBF71TR EI_10_12_KB Entamoeba invadens genomic ... 42 9.4 2
(BZ386006) EINCN91TF EI_10_12_KB Entamoeba invadens genomic ... 42 9.4 2
(CJ463630) Macaca fascicularis mRNA, clone: QnpA-12029, 5' e... 36 9.4 2
(CJ484451) Macaca fascicularis mRNA, clone: QtsA-11990, 5' e... 44 9.4 2
(CJ463635) Macaca fascicularis mRNA, clone: QnpA-12038, 5' e... 36 9.5 2
(BZ392292) EINCO75TR EI_10_12_KB Entamoeba invadens genomic ... 42 9.5 2
(BZ390149) EINBO44TF EI_10_12_KB Entamoeba invadens genomic ... 42 9.5 2
(CJ458089) Macaca fascicularis mRNA, clone: QmoA-10003, 5' e... 38 9.5 2
(CJ457010) Macaca fascicularis mRNA, clone: QflA-22869, 5' e... 44 9.6 2
(CJ448232) Macaca fascicularis mRNA, clone: QflA-13595, 5' e... 42 9.6 2
(CJ490597) Macaca fascicularis mRNA, clone: QtsA-18394, 5' e... 42 9.6 2
(CJ467493) Macaca fascicularis mRNA, clone: QnpA-17022, 5' e... 44 9.7 2
(CJ488026) Macaca fascicularis mRNA, clone: QtsA-15719, 5' e... 40 9.7 2
(CJ477737) Macaca fascicularis mRNA, clone: QtrA-12615, 5' e... 40 9.7 2
(CJ481368) Macaca fascicularis mRNA, clone: QtrA-17026, 5' e... 44 9.7 2
(CJ476049) Macaca fascicularis mRNA, clone: QtrA-10042, 5' e... 44 9.8 2
(BZ396196) EINBR96TF EI_10_12_KB Entamoeba invadens genomic ... 42 9.8 2
(CJ488565) Macaca fascicularis mRNA, clone: QtsA-16278, 5' e... 44 9.9 2
(BZ392551) EINBK67TR EI_10_12_KB Entamoeba invadens genomic ... 42 9.9 2
(ER609894) 1093016301366 Global-Ocean-Sampling_GS-36-01-01-2... 40 9.9 2
(FH130049) CHO_OF3500xj13f1.ab1 CHO_OF3 Nicotiana tabacum ge... 42 9.9 2
(CJ471994) Macaca fascicularis mRNA, clone: QorA-11733, 5' e... 42 10.0 2
(CJ449111) Macaca fascicularis mRNA, clone: QflA-14614, 5' e... 36 10.0 2

>(BJ436861) Dictyostelium discoideum cDNA clone:ddv32p08, 3' end,
single read.
Length = 749

Score = 1320 bits (666), Expect(3) = 0.0
Identities = 666/666 (100%)
Strand = Plus / Minus


Query: 1348 atggagtaatgaggatggtttcttctttgattcaatcatttcaccaggttctcatcaaca 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 atggagtaatgaggatggtttcttctttgattcaatcatttcaccaggttctcatcaaca 690


Query: 1408 tcaactcaaagtctattcattcgttggtttaataccattgtttgctgctgaaattttgga 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tcaactcaaagtctattcattcgttggtttaataccattgtttgctgctgaaattttgga 630


Query: 1468 ttatgatacacttcaagctttaccaaaattcaaagaacgtttggattggttcgtaaagta 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttatgatacacttcaagctttaccaaaattcaaagaacgtttggattggttcgtaaagta 570


Query: 1528 tagaccaaatttagtgaaaaacattgctccattcactgctttgggtcaaaataaatcacg 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tagaccaaatttagtgaaaaacattgctccattcactgctttgggtcaaaataaatcacg 510


Query: 1588 tttactctcaattgtaaatcgtgagaaattggaattaatcttaaagaaaatgttggatga 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tttactctcaattgtaaatcgtgagaaattggaattaatcttaaagaaaatgttggatga 450


Query: 1648 agattggttcctctctgaaaatggtattagatcattatcaaaacatcacaaggatcatcc 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agattggttcctctctgaaaatggtattagatcattatcaaaacatcacaaggatcatcc 390


Query: 1708 attcacttttgctgagatggatgcttgtgttggttatgtacctggcgagagtgatgttca 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 attcacttttgctgagatggatgcttgtgttggttatgtacctggcgagagtgatgttca 330


Query: 1768 tatcatgggttcaaatagtaattggagaggtccagtttggtttgccgtaaattatctcat 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tatcatgggttcaaatagtaattggagaggtccagtttggtttgccgtaaattatctcat 270


Query: 1828 gattcaatcacttcgtacctatcatgaatactatggtgatgaattccaaattgaatatcc 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gattcaatcacttcgtacctatcatgaatactatggtgatgaattccaaattgaatatcc 210


Query: 1888 aacaaactctggtaacctcgtaactttggatatcgtagccgatgatatctctaaacgtct 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aacaaactctggtaacctcgtaactttggatatcgtagccgatgatatctctaaacgtct 150


Query: 1948 cattagtatcttccaagagaatcaagatggtactagaaaatttgctggtggtaaaccaat 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 cattagtatcttccaagagaatcaagatggtactagaaaatttgctggtggtaaaccaat 90


Query: 2008 tttcgc 2013
||||||
Sbjct: 89 tttcgc 84

Score = 105 bits (53), Expect(3) = 0.0
Identities = 53/53 (100%)
Strand = Plus / Minus


Query: 2021 cattggaaagatcatatattgttcaatgaatatttccatggtgatagtggtgc 2073
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 cattggaaagatcatatattgttcaatgaatatttccatggtgatagtggtgc 24

Score = 46.1 bits (23), Expect(3) = 0.0
Identities = 23/23 (100%)
Strand = Plus / Minus


Query: 2075 ggtcttggtgcttctcaccagac 2097
|||||||||||||||||||||||
Sbjct: 23 ggtcttggtgcttctcaccagac 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,513,993,674
Number of extensions: 147348860
Number of successful extensions: 11803767
Number of sequences better than 10.0: 371
Length of query: 2199
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 2175
Effective length of database: 96,409,374,237
Effective search space: 209690388965475
Effective search space used: 209690388965475
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15754-1 (Contig-U15754-1Q) /CSM_Contig/Contig-U15754-1Q.Seq.d
(2199 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CP000473_7027(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 498 e-139
CP001344_4154(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 493 e-137
CP000393_1667(CP000393|pid:none) Trichodesmium erythraeum IMS101... 483 e-134
CP000117_2755(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 477 e-133
AM270007_32(AM270007|pid:none) Aspergillus niger contig An02c012... 476 e-132
AP007159_335(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 469 e-130
CP001053_2231(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 464 e-129
CR382128_90(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 464 e-129
AL355926_4(AL355926|pid:none) Neurospora crassa DNA linkage grou... 461 e-128
FN392321_1119(FN392321|pid:none) Pichia pastoris GS115 chromosom... 457 e-127
BX908798_121(BX908798|pid:none) Parachlamydia-related symbiont U... 457 e-127
BA000045_1113(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 455 e-126
CP001053_3010(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 454 e-126
BX294151_247(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 450 e-124
CR380958_452(CR380958|pid:none) Candida glabrata strain CBS138 c... 449 e-124
CP000271_2761(CP000271|pid:none) Burkholderia xenovorans LB400 c... 449 e-124
CR380954_23(CR380954|pid:none) Candida glabrata strain CBS138 ch... 446 e-123
CU928165_223(CU928165|pid:none) Kluyveromyces thermotolerans str... 437 e-121
CP000383_3377(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 437 e-121
FM992690_321(FM992690|pid:none) Candida dubliniensis CD36 chromo... 437 e-120
(Q04336) RecName: Full=Uncharacterized protein YMR196W; &S50925... 436 e-120
CP000394_503(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 433 e-119
CR382122_416(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 432 e-119
CP000473_7467(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 429 e-118
CP001344_1586(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 424 e-117
CP000698_2591(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 424 e-117
AY212801_4(AY212801|pid:none) Uncultured bacterium clone VIIC10 ... 422 e-116
CP001197_2072(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 420 e-115
CP000076_3621(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 414 e-114
AM236080_63(AM236080|pid:none) Rhizobium leguminosarum bv. vicia... 413 e-113
CP000473_2853(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 413 e-113
CP001287_390(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 407 e-112
CP001001_3336(CP001001|pid:none) Methylobacterium radiotolerans ... 399 e-109
AM746676_7435(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 398 e-109
CP000750_4394(CP000750|pid:none) Kineococcus radiotolerans SRS30... 396 e-108
CT978603_1932(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 379 e-103
CP000103_669(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 356 2e-96
CP000435_1878(CP000435|pid:none) Synechococcus sp. CC9311, compl... 353 1e-95
AY120852_6(AY120852|pid:none) Synechococcus sp. PCC 7942 PacS, d... 323 2e-86
CT573073_696(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 248 1e-70
CR382125_469(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 56 6e-06
(P53008) RecName: Full=Mannosyl-oligosaccharide glucosidase; ... 52 7e-05
CP000312_338(CP000312|pid:none) Clostridium perfringens SM101, c... 52 9e-05
CR380947_54(CR380947|pid:none) Candida glabrata strain CBS138 ch... 52 1e-04
CP000139_292(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 50 3e-04
(O14255) RecName: Full=Probable mannosyl-oligosaccharide glucosi... 47 0.003
CP001133_373(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 46 0.005
CP000021_339(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 46 0.005
FN392319_524(FN392319|pid:none) Pichia pastoris GS115 chromosome... 46 0.005
AE016795_1629(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 45 0.008
CP000048_364(CP000048|pid:none) Borrelia hermsii DAH, complete g... 45 0.011
CP000826_1963(CP000826|pid:none) Serratia proteamaculans 568, co... 45 0.011
CP000931_92(CP000931|pid:none) Shewanella halifaxensis HAW-EB4, ... 45 0.011
CP000821_4423(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 44 0.025
CP000976_367(CP000976|pid:none) Borrelia duttonii Ly, complete g... 43 0.042
AL451013_6(AL451013|pid:none) Neurospora crassa DNA linkage grou... 43 0.042
CP000851_4132(CP000851|pid:none) Shewanella pealeana ATCC 700345... 42 0.072
(P94250) RecName: Full=Uncharacterized protein BB_0381; &CP0012... 42 0.072
U49938_5(U49938|pid:none) Borrelia burgdorferi potential virulen... 42 0.072
AE000783_380(AE000783|pid:none) Borrelia burgdorferi B31, comple... 42 0.072
D70147(D70147)conserved hypothetical protein BB0381 - Lyme disea... 42 0.072
BX005288_1(BX005288|pid:none) Zebrafish DNA sequence from clone ... 42 0.12
CP000049_366(CP000049|pid:none) Borrelia turicatae 91E135, compl... 42 0.12
CP000013_374(CP000013|pid:none) Borrelia garinii PBi, complete g... 41 0.21
CU640366_624(CU640366|pid:none) Podospora anserina genomic DNA c... 41 0.21
CP000034_3028(CP000034|pid:none) Shigella dysenteriae Sd197, com... 41 0.21
FM180568_3373(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 40 0.27
AY449460_17(AY449460|pid:none) Oikopleura dioica clone BACOIKO00... 40 0.27
CP000472_4809(CP000472|pid:none) Shewanella piezotolerans WP3, c... 40 0.27
CP000247_3141(CP000247|pid:none) Escherichia coli 536, complete ... 40 0.36
DQ295807_1(DQ295807|pid:none) Candida albicans strain SC5314 Cwh... 40 0.36
BC161695_1(BC161695|pid:none) Xenopus laevis hypothetical protei... 40 0.36
CP000970_3235(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 40 0.47
AE014075_3752(AE014075|pid:none) Escherichia coli CFT073, comple... 40 0.47
CU651637_2981(CU651637|pid:none) Escherichia coli LF82 chromosom... 40 0.47
CU928162_3656(CU928162|pid:none) Escherichia coli ED1a chromosom... 40 0.47
CP000243_3456(CP000243|pid:none) Escherichia coli UTI89, complet... 40 0.47
CU928145_3419(CU928145|pid:none) Escherichia coli 55989 chromoso... 39 0.61
CU928164_3556(CU928164|pid:none) Escherichia coli IAI39 chromoso... 39 0.61
AE014073_2857(AE014073|pid:none) Shigella flexneri 2a str. 2457T... 39 0.61
AP009240_3361(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 39 0.61
CU928163_3491(CU928163|pid:none) Escherichia coli UMN026 chromos... 39 0.61
FM992691_536(FM992691|pid:none) Candida dubliniensis CD36 chromo... 39 0.79
CP000790_2139(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 39 1.0
EU895315_1(EU895315|pid:none) Escherichia coli strain 493/89 put... 39 1.0
A85969(A85969) probable isomerase ygjK [imported] - Escherichia ... 39 1.0
CP000946_608(CP000946|pid:none) Escherichia coli ATCC 8739, comp... 39 1.0
(P42592) RecName: Full=Uncharacterized protein ygjK; Flags: Prec... 39 1.0
CR382136_525(CR382136|pid:none) Debaryomyces hansenii strain CBS... 39 1.0
BA000032_102(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 38 1.4
(A2BW03) RecName: Full=3-dehydroquinate synthase; EC=4.... 38 1.8
BC100610_1(BC100610|pid:none) Xenopus tropicalis glucosidase 1, ... 38 1.8
CP000431_3500(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 37 3.9
AC002396_26(AC002396|pid:none) Arabidopsis thaliana chromosome I... 36 5.1
CP000606_3738(CP000606|pid:none) Shewanella loihica PV-4, comple... 36 6.7
AF047839_1(AF047839|pid:none) Pseudoalteromonas sp. S9 putative ... 36 6.7
Z68748_11(Z68748|pid:none) Caenorhabditis elegans Cosmid F13H10,... 36 6.7
Z68748_12(Z68748|pid:none) Caenorhabditis elegans Cosmid F13H10,... 36 6.7
CP000688_549(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 36 6.7
AP003707_4(AP003707|pid:none) Oryza sativa Japonica Group genomi... 35 8.8
AP008207_3493(AP008207|pid:none) Oryza sativa (japonica cultivar... 35 8.8

>CP000473_7027(CP000473|pid:none) Solibacter usitatus Ellin6076,
complete genome.
Length = 880

Score = 498 bits (1283), Expect = e-139
Identities = 241/442 (54%), Positives = 311/442 (70%), Gaps = 7/442 (1%)
Frame = +2

Query: 815 LAFQMIPMMLLDIEWTKRQLILITREWYSHSSGALCAYEWDFGDVNPPVHAWATLEVYKH 994
LAF +P+ L+D E+ K QL L+ REWY H +G L AYEW GDVNPPVHAWA VYK
Sbjct: 431 LAFHCLPLALIDSEFAKDQLTLLLREWYLHPNGQLPAYEWALGDVNPPVHAWAAWRVYKI 490

Query: 995 IEKTTGVKDIEFLEQIFHKLLLNFTWWVNKKDIKGNNIFEGGFLGLDNIGVFDRSTPLKD 1174
+K G D +FLE++FHKLLLNFTWWVN+KD +G NIF+GGFLGLDNIGVFDRS PL
Sbjct: 491 EQKREGRADRKFLERVFHKLLLNFTWWVNRKDAQGMNIFQGGFLGLDNIGVFDRSAPLPS 550

Query: 1175 GAKLQQADGTSWMAFYSANMLKISLILARERNSYESIATKFLEHFISIAKSI----TSKT 1342
G ++QADGT WMA YS N+L+I+L LARE ++YE +A+KF EHF+ IAK++ +
Sbjct: 551 GEFIEQADGTGWMAMYSLNLLRIALELAREDSAYEDVASKFWEHFLYIAKAMNHLGSDGV 610

Query: 1343 GLWSNEDGFFFDSIISPGSHQHQLKVYSFVGLIPLFAAEILDYDTLQALPKFKERLDWFV 1522
G+W DGFF+D++ P LK+ S VGLIPLFA E L+ + P FK R+ WF+
Sbjct: 611 GMWDEADGFFYDALNMPDGRHMPLKIRSIVGLIPLFAVETLEPRQIDQFPGFKRRMQWFI 670

Query: 1523 KYRPNLVKNIAPFTALGQNKSRLLSIVNREKLELILKKMLDEDWFLSENGIRSLSKHHKD 1702
+ RP+L N+A G+ + RLLSIV+ ++L ILK+ LDE+ FLS GIR +S+ H D
Sbjct: 671 ENRPDLTYNVASMEVPGKGQRRLLSIVDPDQLRRILKRTLDEEEFLSPYGIRGISRAHGD 730

Query: 1703 HPFTFA--EMDACVGYVPGESDVHIMGSNSNWRGPVWFAVNYLMIQSLRTYHEYYGDEFQ 1876
HP+ A + VGY P ES + G NSNWRGPVWF +NYL+I+SL+ +H Y GD+++
Sbjct: 731 HPYVLAVDGEEHRVGYEPAESRTALFGGNSNWRGPVWFPLNYLLIESLQKFHHYLGDDYK 790

Query: 1877 IEYPTNSGNLVTLDIVADDISKRLISIFQENQDGTRKFAGGKPIF-AKKHWKDHILFNEY 2053
+E PT SG ++TL VA +IS+RL IF + +G R GG P+F A HW+DH+LF EY
Sbjct: 791 VECPTGSGRMMTLWEVAAEISRRLSGIFLRDANGRRAVNGGNPLFDADPHWRDHVLFYEY 850

Query: 2054 FHGDSGAGLGASHQTGWTALVA 2119
FHG++G GLGASHQTGWT LVA
Sbjct: 851 FHGENGMGLGASHQTGWTGLVA 872

Score = 231 bits (590), Expect(2) = 1e-69
Identities = 105/187 (56%), Positives = 128/187 (68%), Gaps = 2/187 (1%)
Frame = +3

Query: 51 EQKRLDDSLLRNSDWKNWGTYVSDRQWATVREDYG--GEPWTYFPHDHARSRAYRWSEDS 224
E+ R++DS LR + W WG Y+S+R W TVREDY G W YFP DHA SR YRW+ED
Sbjct: 15 ERARMEDSRLRKAHWNRWGPYLSERAWGTVREDYSASGTAWDYFPFDHAASRTYRWNEDG 74

Query: 225 IGGFCNRFQNICLGLAFWNEKDPIIKERFFGLGGPEGNHGEDVKEHYFYLDNTPTHSYAK 404
I G C+R Q +C + WN +DPI+KER FGL G EGNHGEDVKE+YFYLDNTPTHSY K
Sbjct: 75 IAGICDRHQFLCFAIVLWNGRDPILKERLFGLNGNEGNHGEDVKEYYFYLDNTPTHSYMK 134

Query: 405 MLYKYPMNEYPYSDLVSTNAQRGKQDPEYEIEDTGIFDKDEYFDCYIEYAKGDQEDDILC 584
LYKYP +PY L N + + D EYE+ DTGIF ++ YFD ++EYAK E DI
Sbjct: 135 CLYKYPQAIFPYEQLRLENRRCCRLDSEYELLDTGIFKENRYFDVFVEYAKASPE-DISI 193

Query: 585 KVTVHNR 605
++ NR
Sbjct: 194 RIQAFNR 200

Score = 57.8 bits (138), Expect(2) = 1e-69
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1

Query: 622 ATIHVLPHLWYRNTWSWGYSDRRPYIHRHTHNQLVSEEVHIGKRYYIVETS 774
AT+H+LP +W+RNTWSWG + ++P +HR N + +E + GKRY VE S
Sbjct: 205 ATLHLLPTIWFRNTWSWGCAVQKPELHR-ASNGIEIDEPNYGKRYLYVEGS 254

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,737,423,353
Number of extensions: 79368026
Number of successful extensions: 194361
Number of sequences better than 10.0: 101
Number of HSP's gapped: 192650
Number of HSP's successfully gapped: 180
Length of query: 733
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 597
Effective length of database: 611,008,840
Effective search space: 364772277480
Effective search space used: 364772277480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.66 gvh: 0.37 alm: 0.33 top: 0.53 tms: 0.00 mit: 0.38 mip: 0.05
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: mitochondrial
24.0 %: cytoplasmic
24.0 %: nuclear
4.0 %: cytoskeletal
4.0 %: peroxisomal
4.0 %: extracellular, including cell wall
4.0 %: vacuolar
4.0 %: plasma membrane

>> prediction for Contig-U15754-1 is mit

VS (DIR, S) 0
VH (FL, L) 39
VF (FL, S) 1
AH (FL, L) 3
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 2
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0