Contig-U15711-1 |
Contig ID |
Contig-U15711-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
gap included |
Contig length |
2507 |
Chromosome number (1..6, M) |
- |
Chromosome length |
- |
Start point |
- |
End point |
- |
Strand (PLUS/MINUS) |
- |
Number of clones |
21 |
Number of EST |
29 |
Link to clone list |
U15711 |
List of clone(s) |
est1=AHB236F,1,618 est2=SSB526F,619,872 est3=SSB529F,619,872 est4=CHE765F,629,1090 est5=SHA826F,723,1151 est6=SHA826Z,723,1138 est7=SSM230Z,783,1442 est8=SSB737Z,798,1315 est9=SHC453F,830,1250 est10=AHI571F,905,1509 est11=AFL485E,921,2085 est12=CHE765Z,952,1574 est13=SSG449Z,957,1108 est14=AHB236Z,958,1331 est15=SHK751F,958,1221 est16=SLK637F,986,1587 est17=SSB526Z,1010,1484 est18=AFF770F,1133,1694 est19=AHQ376F,1146,1820 est20=CFI791E,1245,2388 est21=CFF280F,1384,1794 est22=CHM214Z,1650,2269 est23=SHK751Z,1662,2399 est24=SSG886Z,1699,2403 est25=CFF280Z,1772,2323 est26=AFF770Z,1830,2378 est27=SSM230F,1926,2511 est28=SSJ113Z,1935,2433 est29=VSF501Z,2179,2366
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
Query= Contig-U15711-1 (Contig-U15711-1Q) /CSM_Contig/Contig-U15711-1Q.Seq.d (2517 letters)
Database: CSM 8402 sequences; 8,075,542 total letters
Score E Sequences producing significant alignments: (bits) Value
Contig-U15711-1 (Contig-U15711-1Q) /CSM_Contig/Conti... 2355 0.0 Contig-U13328-1 (Contig-U13328-1Q) /CSM_Contig/Conti... 52 4e-06 Contig-U12369-1 (Contig-U12369-1Q) /CSM_Contig/Conti... 46 3e-04 Contig-U15999-1 (Contig-U15999-1Q) /CSM_Contig/Conti... 44 0.001 Contig-U15590-1 (Contig-U15590-1Q) /CSM_Contig/Conti... 44 0.001 Contig-U15329-1 (Contig-U15329-1Q) /CSM_Contig/Conti... 44 0.001 Contig-U15074-1 (Contig-U15074-1Q) /CSM_Contig/Conti... 44 0.001 Contig-U12325-1 (Contig-U12325-1Q) /CSM_Contig/Conti... 44 0.001 Contig-U12013-1 (Contig-U12013-1Q) /CSM_Contig/Conti... 44 0.001 Contig-U10482-1 (Contig-U10482-1Q) /CSM_Contig/Conti... 38 0.065
>Contig-U15711-1 (Contig-U15711-1Q) /CSM_Contig/Contig-U15711-1Q.Seq.d Length = 2517
Score = 2355 bits (1188), Expect = 0.0 Identities = 1202/1209 (99%) Strand = Plus / Plus
Query: 1201 ttcatcaacagcaactgtaaatagtaatccaaaagtttatccatatgaaattataaagca 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ttcatcaacagcaactgtaaatagtaatccaaaagtttatccatatgaaattataaagca 1260
Query: 1261 agttggtcaaggtacatttggtaaagtttatgaagcaaaaaatcaagataataaaagagt 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 agttggtcaaggtacatttggtaaagtttatgaagcaaaaaatcaagataataaaagagt 1320
Query: 1321 ggccattaaaaaagttgaaaaatcaaatcatttcattagtagagaatacgatattcttaa 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 ggccattaaaaaagttgaaaaatcaaatcatttcattagtagagaatacgatattcttaa 1380
Query: 1381 aattgttgctcatccaaattgtttaagaattttagatatgttttatactgccgaggataa 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 aattgttgctcatccaaattgtttaagaattttagatatgttttatactgccgaggataa 1440
Query: 1441 tnnnnnnntgcaaaatttagtattcgattttattccatatactttagcaagtttattaaa 1500 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 taaaaaaatgcaaaatttagtattcgattttattccatatactttagcaagtttattaaa 1500
Query: 1501 gaaaagacaattatcaattaatttcattaaagtgctattttatcaattatgtcaagcaat 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 gaaaagacaattatcaattaatttcattaaagtgctattttatcaattatgtcaagcaat 1560
Query: 1561 taaacatattcattcaaaagcaatttgtcatagagatataactccaaataatattttatt 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 taaacatattcattcaaaagcaatttgtcatagagatataactccaaataatattttatt 1620
Query: 1621 aagttcaaaaggtgaattaacattagctgattttggaagtgctaaaattttagaatcaaa 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 aagttcaaaaggtgaattaacattagctgattttggaagtgctaaaattttagaatcaaa 1680
Query: 1681 tcatacaagtatgtcatatatttgttcaagatattatagagctcctgaattattagttgg 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 tcatacaagtatgtcatatatttgttcaagatattatagagctcctgaattattagttgg 1740
Query: 1741 ttgttcaaattatactactaaaattgatatttggtcaattggatgtattttagcagaaat 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 ttgttcaaattatactactaaaattgatatttggtcaattggatgtattttagcagaaat 1800
Query: 1801 gttaattggtaaaccattattccctggtacaaattcaaatgatcaattgggtagaattat 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 gttaattggtaaaccattattccctggtacaaattcaaatgatcaattgggtagaattat 1860
Query: 1861 tgaagtattaggatcaccaacaaaagatgatatggaagcaatgaaaccaagtaaaccata 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 tgaagtattaggatcaccaacaaaagatgatatggaagcaatgaaaccaagtaaaccata 1920
Query: 1921 ccatttacaattaccaaatattaatccaaagtttttcgaatcattacataatgttgaaga 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 ccatttacaattaccaaatattaatccaaagtttttcgaatcattacataatgttgaaga 1980
Query: 1981 taaaacagttgttgatttattatcaaaaattttcatttttgatcctgtaaagagagcatc 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 taaaacagttgttgatttattatcaaaaattttcatttttgatcctgtaaagagagcatc 2040
Query: 2041 gattgatgaaattattgcacacccatttttaagagatgtaaatataaatagtttagaatt 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 gattgatgaaattattgcacacccatttttaagagatgtaaatataaatagtttagaatt 2100
Query: 2101 atttgatgaaatgaaatgtttttcagtatcaggtaatggtaaatcatcattaacaacaaa 2160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 atttgatgaaatgaaatgtttttcagtatcaggtaatggtaaatcatcattaacaacaaa 2160
Query: 2161 ttcaacttcatcatcttcgacaactgctaatatgacctctttagcaagttcaagtagtaa 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 ttcaacttcatcatcttcgacaactgctaatatgacctctttagcaagttcaagtagtaa 2220
Query: 2221 taataaaacaacttgctctgaaacttatctttcaagactaccaacaagcgcaatcacaag 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2221 taataaaacaacttgctctgaaacttatctttcaagactaccaacaagcgcaatcacaag 2280
Query: 2281 tagtagtaatttaaaaagtatagataatagtaataatggaaaatcttcttcctcttcaaa 2340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2281 tagtagtaatttaaaaagtatagataatagtaataatggaaaatcttcttcctcttcaaa 2340
Query: 2341 taatattccaagtttaaataatagtaataatggtgtaattacaaatactatttaaagtta 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2341 taatattccaagtttaaataatagtaataatggtgtaattacaaatactatttaaagtta 2400
Query: 2401 aaactttat 2409 ||||||||| Sbjct: 2401 aaactttat 2409
Score = 1225 bits (618), Expect = 0.0 Identities = 618/618 (100%) Strand = Plus / Plus
Query: 1 cactgttggcctactggaatggtggtttaaatattagggcaacacttaaaatattgaata 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cactgttggcctactggaatggtggtttaaatattagggcaacacttaaaatattgaata 60
Query: 61 ttttagtttgttcaggtaataaattggttgaaacatttgaaagatgtctaaatgaattaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttttagtttgttcaggtaataaattggttgaaacatttgaaagatgtctaaatgaattaa 120
Query: 121 cttcaactcgtcctttcacaattattataccacaattatttgcaagattaagtcatcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cttcaactcgtcctttcacaattattataccacaattatttgcaagattaagtcatcccg 180
Query: 181 atacatttgttcaaaaatatgttgttgaaattttaaatagaattggtagagataatccaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atacatttgttcaaaaatatgttgttgaaattttaaatagaattggtagagataatccaa 240
Query: 241 ataaaatagtttatcaaactattgttggttctttaaattttacaaatacaaataataata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ataaaatagtttatcaaactattgttggttctttaaattttacaaatacaaataataata 300
Query: 301 ataatagttcttgtgctgctgccactactgatgatggtttagatattgaattattacaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ataatagttcttgtgctgctgccactactgatgatggtttagatattgaattattacaaa 360
Query: 361 aacaatatccaaattatttacaaattttaaatattaaagagaatctattaaaacattcag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aacaatatccaaattatttacaaattttaaatattaaagagaatctattaaaacattcag 420
Query: 421 aattattagtaaaagagacagagacactcatttatcaattaggtaaacttacaacattgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aattattagtaaaagagacagagacactcatttatcaattaggtaaacttacaacattgt 480
Query: 481 gggatgataattggcaatatttcattgaacaaattcaaggttgggtctatattaatacta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gggatgataattggcaatatttcattgaacaaattcaaggttgggtctatattaatacta 540
Query: 541 aacaatggaatgatgactatcaacaattgaaagccacaataaagaatccaaccatactaa 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aacaatggaatgatgactatcaacaattgaaagccacaataaagaatccaaccatactaa 600
Query: 601 aacatactctaaagaaaa 618 |||||||||||||||||| Sbjct: 601 aacatactctaaagaaaa 618
Score = 420 bits (212), Expect = e-117 Identities = 212/212 (100%) Strand = Plus / Plus
Query: 732 gtgagaaaaatgatacttcaataattcttgatgatattttagatattcaacataatagaa 791 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 gtgagaaaaatgatacttcaataattcttgatgatattttagatattcaacataatagaa 791
Query: 792 aattatttccaaaaattacacatcaagatattgaaaatattagacaaattaggagaatga 851 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 aattatttccaaaaattacacatcaagatattgaaaatattagacaaattaggagaatga 851
Query: 852 atttacattcaattgttaaatcaatgtccactttaaatgttcaagatttaggtttaggaa 911 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 atttacattcaattgttaaatcaatgtccactttaaatgttcaagatttaggtttaggaa 911
Query: 912 tatttgctggtttagaagtaattataattata 943 |||||||||||||||||||||||||||||||| Sbjct: 912 tatttgctggtttagaagtaattataattata 943
Score = 44.1 bits (22), Expect = 0.001 Identities = 22/22 (100%) Strand = Plus / Plus
Query: 981 cctctatttttatcattagtag 1002 |||||||||||||||||||||| Sbjct: 981 cctctatttttatcattagtag 1002
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1091 aataataataataata 1106
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 744 atacttcaataattct 759 |||||||||||||||| Sbjct: 1868 atacttcaataattct 1853
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1013 aataataataataata 1028
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1010 aataataataataata 1025
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1031 aataataataataata 1046
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1061 aataataataataata 1076
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1007 aataataataataata 1022
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1022 aataataataataata 1037
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1103 aataataataataata 1118
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1040 aataataataataata 1055
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1115 aataataataataata 1130
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1004 aataataataataata 1019
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1019 aataataataataata 1034
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1121 aataataataataata 1136
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1046 aataataataataata 1061
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1052 aataataataataata 1067
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1133 aataataataataata 1148
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1130 aataataataataata 1145
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1136 aataataataataata 1151
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1064 aataataataataata 1079
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1076 aataataataataata 1091
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1067 aataataataataata 1082
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1073 aataataataataata 1088
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1079 aataataataataata 1094
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1097 aataataataataata 1112
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1082 aataataataataata 1097
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1088 aataataataataata 1103
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1085 aataataataataata 1100
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1025 aataataataataata 1040
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1070 aataataataataata 1085
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1094 aataataataataata 1109
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1100 aataataataataata 1115
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1109 aataataataataata 1124
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1106 aataataataataata 1121
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1112 aataataataataata 1127
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1055 aataataataataata 1070
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1028 aataataataataata 1043
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1118 aataataataataata 1133
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1124 aataataataataata 1139
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1127 aataataataataata 1142
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1034 aataataataataata 1049
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1037 aataataataataata 1052
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1058 aataataataataata 1073
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1139 aataataataataata 1154
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 1853 agaattattgaagtat 1868 |||||||||||||||| Sbjct: 759 agaattattgaagtat 744
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1043 aataataataataata 1058
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1049 aataataataataata 1064
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1016 aataataataataata 1031
>Contig-U13328-1 (Contig-U13328-1Q) /CSM_Contig/Contig-U13328-1Q.Seq.d Length = 227
Score = 52.0 bits (26), Expect = 4e-06 Identities = 26/26 (100%) Strand = Plus / Plus
Query: 281 tacaaatacaaataataataataata 306 |||||||||||||||||||||||||| Sbjct: 148 tacaaatacaaataataataataata 173
Score = 36.2 bits (18), Expect = 0.26 Identities = 24/26 (92%) Strand = Plus / Plus
Query: 281 tacaaatacaaataataataataata 306 |||||||| |||||||||||||||| Sbjct: 154 tacaaataataataataataataata 179
Score = 34.2 bits (17), Expect = 1.0 Identities = 23/25 (92%) Strand = Plus / Plus
Query: 282 acaaatacaaataataataataata 306 ||||||||||||| |||||||||| Sbjct: 143 acaaatacaaatacaaataataata 167
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 170 aataataataataata 185
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 167 aataataataataata 182
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 173 aataataataataata 188
>Contig-U12369-1 (Contig-U12369-1Q) /CSM_Contig/Contig-U12369-1Q.Seq.d Length = 1298
Score = 46.1 bits (23), Expect = 3e-04 Identities = 23/23 (100%) Strand = Plus / Plus
Query: 284 aaatacaaataataataataata 306 ||||||||||||||||||||||| Sbjct: 1200 aaatacaaataataataataata 1222
Score = 36.2 bits (18), Expect = 0.26 Identities = 24/26 (92%) Strand = Plus / Plus
Query: 281 tacaaatacaaataataataataata 306 |||||||| |||||||||||||||| Sbjct: 1203 tacaaataataataataataataata 1228
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1219 aataataataataata 1234
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1216 aataataataataata 1231
Score = 32.2 bits (16), Expect = 4.0 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 291 aataataataataata 306 |||||||||||||||| Sbjct: 1222 aataataataataata 1237
Database: CSM Posted date: Jun 21, 2004 1:35 PM Number of letters in database: 8,075,542 Number of sequences in database: 8402 Lambda K H 1.37 0.711 1.31
Gapped Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 85,507 Number of Sequences: 8402 Number of extensions: 85507 Number of successful extensions: 24499 Number of sequences better than 10.0: 2395 length of query: 2517 length of database: 8,075,542 effective HSP length: 17 effective length of query: 2500 effective length of database: 7,932,708 effective search space: 19831770000 effective search space used: 19831770000 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 16 (32.2 bits)
|
dna update |
2009. 2.11 |
Homology vs DNA |
Query= Contig-U15711-1 (Contig-U15711-1Q) /CSM_Contig/Contig-U15711-1Q.Seq.d (2517 letters)
Database: ddbj_B 98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ375465) Dictyostelium discoideum cDNA clone:ddc18f23, 3' ... 1469 0.0 1 (C90009) Dictyostelium discoideum slug cDNA, clone SSG886. 1388 0.0 1 (BJ408358) Dictyostelium discoideum cDNA clone:dds45f13, 3' ... 1382 0.0 2 (BJ330948) Dictyostelium discoideum cDNA clone:dda33g10, 5' ... 1225 0.0 1 (BJ382868) Dictyostelium discoideum cDNA clone:ddc46k04, 3' ... 1223 0.0 1 (AC116960) Dictyostelium discoideum chromosome 2 map complem... 1191 0.0 1 (BJ372277) Dictyostelium discoideum cDNA clone:ddc11o20, 3' ... 1094 0.0 1 (BJ340337) Dictyostelium discoideum cDNA clone:dda12l17, 3' ... 979 0.0 2 (BJ361801) Dictyostelium discoideum cDNA clone:ddc18f23, 5' ... 708 0.0 3 (BJ323869) Dictyostelium discoideum cDNA clone:dda12l17, 5' ... 507 0.0 3 (BJ358922) Dictyostelium discoideum cDNA clone:ddc11o20, 5' ... 706 0.0 2 (C90757) Dictyostelium discoideum slug cDNA, clone SSJ113. 531 e-164 4 (BJ364377) Dictyostelium discoideum cDNA clone:ddc31b17, 5' ... 450 e-128 2 (AU038978) Dictyostelium discoideum slug cDNA, clone SSM230. 184 1e-89 3 (AU265329) Dictyostelium discoideum vegetative cDNA clone:VS... 250 1e-69 2 (AU071451) Dictyostelium discoideum slug cDNA, clone SSB529. 272 6e-68 1 (AU071450) Dictyostelium discoideum slug cDNA, clone SSB526. 272 6e-68 1 (L34674) Dictyostelium discoideum glycogen synthase kinase 3... 46 2e-10 5 (AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 46 3e-09 10 (EC818966) SME00008568 esmbsro2 Sawyeria marylandensis cDNA,... 64 3e-09 2 (EL463415) CHTS17844.b1_H21.ab1 CHT(LMS) Jerusalem artichoke... 62 4e-08 2 (AJ758862) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 60 1e-07 2 (AJ758518) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 60 1e-07 2 (BE223187) kp73g08.y1 TBN95TM-SSFH Strongyloides stercoralis... 38 2e-07 5 (AJ759858) Gerbera hybrid cv. 'Terra Regina' EST, clone G000... 60 5e-07 2 (AF083031) Guillardia theta nucleomorph chromosome 3, comple... 40 6e-07 15 (EL439396) CHTM14555.b1_F16.ab1 CHT(LMS) Jerusalem artichoke... 68 2e-06 2 (CT764058) Paramecium tetraurelia 5-PRIME EST from clone LK0... 48 2e-06 2 (CT784789) Paramecium tetraurelia 5-PRIME EST from clone LK0... 46 7e-06 2 (CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 38 9e-06 22 (M76585) Candida albicans protein kinase (ERK1) gene, comple... 62 1e-05 3 (AL008970) Plasmodium falciparum MAL3P4. 40 1e-05 10 (AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 34 2e-05 15 (EC821584) SME00007124 esmbsro2 Sawyeria marylandensis cDNA,... 64 3e-05 1 (DY664077) SS_CP_07_H10 SS_CP Senecio squalidus subsp. squal... 64 3e-05 1 (EY092947) CAZI20980.fwd CAZI Artemisia annua normalized lea... 54 3e-05 2 (BA000016) Clostridium perfringens str. 13 DNA, complete gen... 38 3e-05 25 (AC117080) Dictyostelium discoideum chromosome 2 map complem... 42 4e-05 5 (AZ166091) SP_0083_B1_B05_SP6E Strongylocentrotus purpuratus... 52 5e-05 3 (AZ165850) SP_0083_A2_B05_SP6E Strongylocentrotus purpuratus... 52 5e-05 3 (BJ338487) Dictyostelium discoideum cDNA clone:dda61p14, 5' ... 34 6e-05 4 (BJ424664) Dictyostelium discoideum cDNA clone:ddv53l06, 5' ... 44 6e-05 3 (EH778254) CNSS17081.b1_B23.ab1 CNS(LMS) yellow starthistle ... 50 1e-04 2 (EE617540) CHWM4921.b1_B08.ab1 CHW(LMS) silverleaf sunflower... 50 1e-04 2 (EL362546) CCEM7079.b1_N17.ab1 CCE(LMS) endive Cichorium end... 62 1e-04 1 (EH789865) CNSS29908.b1_H14.ab1 CNS(LMS) yellow starthistle ... 62 1e-04 1 (BJ415438) Dictyostelium discoideum cDNA clone:ddv22g16, 5' ... 42 1e-04 4 (AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 52 2e-04 5 (CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 38 2e-04 16 (BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 2e-04 23 (AE017263) Mesoplasma florum L1 complete genome. 38 2e-04 22 (EH773305) CNSM5754.b1_D24.ab1 CNS(LMS) yellow starthistle C... 60 3e-04 2 (AL034558) Plasmodium falciparum MAL3P2. 44 3e-04 12 (EH775998) CNSM8287.b1_M08.ab1 CNS(LMS) yellow starthistle C... 60 3e-04 2 (AC115578) Dictyostelium discoideum chromosome 2 map complem... 34 4e-04 7 (BJ413883) Dictyostelium discoideum cDNA clone:ddv17d09, 5' ... 38 4e-04 3 (CO998762) pam01-17ms3-h06 Pam01 Persea americana cDNA clone... 44 4e-04 2 (AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4... 42 4e-04 10 (AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 38 5e-04 14 (AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 42 6e-04 12 (CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 40 6e-04 21 (AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 36 6e-04 12 (AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 36 7e-04 9 (CP000361) Arcobacter butzleri RM4018, complete genome. 38 8e-04 22 (BJ337293) Dictyostelium discoideum cDNA clone:dda56n20, 5' ... 44 0.001 3 (U68754) Dictyostelium discoideum putative transcription fac... 40 0.001 4 (CR382401) Plasmodium falciparum chromosome 6, complete sequ... 46 0.001 10 (AC116925) Dictyostelium discoideum chromosome 2 map 4189423... 42 0.001 7 (FC812421) Sr_pASP6_010m13_SP6 S. ratti mixed stage pAMP Str... 50 0.001 3 (DQ767687) Brassica napus AtSK12-like protein mRNA, complete... 38 0.001 2 (DY944329) CHPY12236.b1_H12.ab1 CHP(XYZ) plains sunflower He... 40 0.002 2 (EX119068) BR102898 cotyledon cDNA library KHCT Brassica rap... 38 0.002 2 (ES699219) gsb_001d_g07 Lolium perenne gsb Lolium perenne cD... 44 0.002 2 (EX122476) BR106306 mature green leaf cDNA library KHLM Bras... 38 0.002 2 (GE566726) CCHT24479.b1_M24.ab1 CCHT Niger Seed Guizotia aby... 40 0.002 2 (EV123645) 0128957 Brassica napus Root library Brassica napu... 38 0.002 2 (EE464283) BNSCS2CT_UP_025_G12_07JAN2005_084 Brassica napus ... 38 0.002 2 (FD440915) Atr02b_115_F03_C011.g1 FGP Female Amborella trich... 46 0.002 2 (CO995943) atr02-11ms1-b11 Atr02 Amborella trichopoda cDNA c... 46 0.002 2 (FD442713) Atr02b_143_D02_C011.g1 FGP Female Amborella trich... 46 0.002 2 (DN965074) 221c05w longbai no.2 one month old leaves Brassic... 38 0.002 2 (DN966497) 9g08w longbai no.2 one month old leaves Brassica ... 38 0.002 2 (EC769748) EST 6244 Guarana fruits cDNA library Paullinia cu... 48 0.002 2 (DN963574) 191C02 longbai no.2 one month old leaves Brassica... 38 0.002 2 (DN961011) 112f06w longbai no.2 one month old leaves Brassic... 38 0.002 2 (DN963789) 101g10w longbai no.2 one month old leaves Brassic... 38 0.002 2 (AM661334) Entamoeba moshkovskii FIC GSS, clone mosh108h04.p1k. 40 0.002 2 (BJ396799) Dictyostelium discoideum cDNA clone:dds44b03, 5' ... 34 0.002 4 (CF468874) P11-F3 Plasmodium yoelli 17X axenic hepatic stage... 58 0.002 1 (BG602948) EST502038 Plasmodium yoelii sporozoite cDNA Plasm... 58 0.002 1 (FF572103) TTEC107THB Tetrahymena thermophila conjugation cD... 58 0.002 1 (AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 38 0.002 11 (AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 34 0.002 16 (AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 48 0.002 3 (BJ427142) Dictyostelium discoideum cDNA clone:ddv61m08, 5' ... 36 0.003 4 (U87912) Dictyostelium discoideum MAP kinase kinase protein ... 36 0.003 5 (AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 44 0.003 4 (AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 38 0.003 13 (AF362369) Dictyostelium discoideum histidine kinase DhkG (d... 40 0.003 6 (AL844507) Plasmodium falciparum chromosome 8. 40 0.004 6 (AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 40 0.004 21 (CX574636) TTE00034612 Amplicon Express - Conjugative Form T... 40 0.004 3 (CX573763) TTE00034484 Amplicon Express - Conjugative Form T... 40 0.004 3 (CX575424) TTE00034001 Amplicon Express - Conjugative Form T... 40 0.004 3 (AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 0.005 9 (CX575521) TTE00031031 Amplicon Express - Conjugative Form T... 40 0.005 3 (AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 38 0.005 20 (AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 42 0.005 12 (CR318606) Zebrafish DNA sequence from clone CH211-207N1 in ... 38 0.005 14 (BJ423103) Dictyostelium discoideum cDNA clone:ddv48g02, 5' ... 36 0.006 4 (CX584744) TTE00032503 Amplicon Express - Conjugative Form T... 40 0.006 3 (CT766827) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.006 2 (CT769661) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.006 2 (CT765264) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.006 2 (CT770563) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.006 2 (CT769681) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.006 2 (DW106010) CLRX385.b3_A01.ab1 CLR(XYZ) lettuce serriola Lact... 44 0.006 2 (CT761734) Paramecium tetraurelia 3-PRIME EST from clone LK0... 38 0.006 2 (DW106008) CLRX385.b1_A01.ab1 CLR(XYZ) lettuce serriola Lact... 44 0.006 2 (DW106009) CLRX385.b2_A01.ab1 CLR(XYZ) lettuce serriola Lact... 44 0.006 2 (FF579804) BG03005A1B01.f1 BG03- primary and normalized libr... 44 0.006 2 (AM627716) Entamoeba dispar GSS, clone dispar24d01.q1k. 44 0.006 2 (EE615346) CHWM2794.b1_D03.ab1 CHW(LMS) silverleaf sunflower... 42 0.006 2 (BQ967766) QHB30O14.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 42 0.006 2 (CX585292) TTE00016716 Amplicon Express - Conjugative Form T... 40 0.006 3 (EE621381) CHWM8498.b1_C13.ab1 CHW(LMS) silverleaf sunflower... 42 0.006 2 (BQ914393) QHB10G21.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 42 0.006 2 (BQ917029) QHB20A22.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 42 0.006 2 (BE441145) EST408415 tomato developing/immature green fruit ... 40 0.006 2 (DT598265) ltu01-31ms1-k05 Ltu01 Liriodendron tulipifera cDN... 40 0.006 2 (DT596433) ltu01-29ms1-n11 Ltu01 Liriodendron tulipifera cDN... 40 0.006 2 (CX587155) TTE00021704 Amplicon Express - Conjugative Form T... 40 0.006 3 (AF272672) Hydra vulgaris serine/threonine kinase GSK3 mRNA,... 48 0.006 3 (CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 38 0.007 23 (AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 42 0.007 4 (DY681782) TTEAA49THB Tetrahymena thermophila EST library, c... 40 0.007 3 (CP000742) Methanococcus vannielii SB, complete genome. 36 0.007 21 (FH359253) CHO_OF4686xc06f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 0.008 4 (AF362374) Dictyostelium discoideum histidine kinase DhkM (d... 42 0.008 6 (BX537134) Zebrafish DNA sequence from clone CH211-205J6. 38 0.009 11 (AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 34 0.009 20 (CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.009 22 (BJ415752) Dictyostelium discoideum cDNA clone:ddv23i16, 5' ... 40 0.011 3 (AF482381) Dictyostelium discoideum ABC transporter AbcG2 (a... 42 0.011 4 (AX344552) Sequence 3 from Patent WO0200932. 46 0.011 14 (AA550316) 1457m3 gmbPfHB3.1, G. Roman Reddy Plasmodium falc... 36 0.011 4 (BX230916) Danio rerio genomic clone DKEY-249L22, genomic su... 36 0.012 4 (AF250284) Amsacta moorei entomopoxvirus, complete genome. 34 0.012 21 (CU183096) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 38 0.013 16 (BJ424863) Dictyostelium discoideum cDNA clone:ddv53g24, 5' ... 44 0.014 2 (AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 44 0.014 5 (EL509661) H03_PF-SAU3A-T3-S-P26.AB1 Blood stage Plasmodium ... 36 0.014 4 (BX173672) Danio rerio genomic clone DKEY-150M6, genomic sur... 36 0.015 4 (DU058789) 90678 Tomato HindIII BAC Library Solanum lycopers... 36 0.015 4 (EI895610) VUH1-77J11TR VUUBBa (VUH1) Vigna unguiculata geno... 38 0.016 4 (FH089197) CHO_OF3034xb14f1.ab1 CHO_OF3 Nicotiana tabacum ge... 32 0.016 4 (BJ419005) Dictyostelium discoideum cDNA clone:ddv34a21, 5' ... 40 0.016 2 (AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 40 0.017 12 (CJ456517) Macaca fascicularis mRNA, clone: QflA-22354, 5' e... 32 0.017 4 (AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 44 0.017 9 (BJ370390) Dictyostelium discoideum cDNA clone:ddc53o22, 5' ... 38 0.017 3 (AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.018 15 (AY170918) Dictyostelium discoideum pats1 gene, partial cds. 38 0.020 6 (AF246689) Dictyostelium discoideum ABC transporter mdrA1 (M... 42 0.021 4 (CF435544) EST671889 normalized cDNA library of onion Allium... 30 0.021 3 (CF441072) EST677417 normalized cDNA library of onion Allium... 30 0.021 3 (AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 36 0.021 10 (X97315) M.sativa mRNA for cdc2 kinase homologue, cdc2MsD. 44 0.021 2 (DY615454) AC0523 NOLLY Medicago truncatula cDNA 5', mRNA se... 44 0.021 2 (CT813530) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.022 2 (DN960463) 102F3w longbai no.2 one month old leaves Brassica... 38 0.022 2 (AC116100) Dictyostelium discoideum chromosome 2 map 6163571... 34 0.022 10 (EC604179) A586 YLX600 Hevea brasiliensis cDNA clone A586 5'... 42 0.022 2 (AM677905) Entamoeba terrapinae GSS, clone terra137h12.q1k. 36 0.022 4 (AL034559) Plasmodium falciparum MAL3P7. 40 0.023 11 (AX392734) Sequence 24 from Patent WO0212526. 34 0.023 10 (AR707081) Sequence 24 from patent US 6933145. 34 0.023 10 (DH297987) Oryzias latipes Fosmid clone:GOLWFno644_f02, forw... 36 0.024 4 (BJ365514) Dictyostelium discoideum cDNA clone:ddc35k14, 5' ... 36 0.024 4 (U23477) Dictyostelium discoideum phosphatidylinositol-4,5-d... 36 0.024 7 (AL844509) Plasmodium falciparum chromosome 13. 44 0.025 7 (AC156936) Mus musculus BAC clone RP24-90K8 from chromosome ... 54 0.026 1 (AC140208) Mus musculus BAC clone RP24-469B21 from chromosom... 54 0.026 1 (AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 54 0.026 1 (CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 54 0.026 1 (AC170882) Mus musculus chromosome 14 clone RP24-126H23, WOR... 54 0.026 1 (CR248806) Forward strand read from insert in 5'HPRT inserti... 54 0.026 1 (CR148505) Forward strand read from insert in 5'HPRT inserti... 54 0.026 1 (EY499515) CBBP473.rev CBBP Hirudo medicinalis hermaphrodite... 54 0.026 1 (EY489346) CBBP16988.rev CBBP Hirudo medicinalis hermaphrodi... 54 0.026 1 (EY488862) CBBP16693.rev CBBP Hirudo medicinalis hermaphrodi... 54 0.026 1 (EY484484) CBBP13612.rev CBBP Hirudo medicinalis hermaphrodi... 54 0.026 1 (EY483581) CBBP13063.rev CBBP Hirudo medicinalis hermaphrodi... 54 0.026 1 (EY478955) CBBP10003.rev CBBP Hirudo medicinalis hermaphrodi... 54 0.026 1 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.027 5 (AJ938182) Staphylococcus aureus RF122 complete genome. 38 0.027 25 (AZ166751) SP_0088_B2_G12_T7A Strongylocentrotus purpuratus,... 44 0.027 3 (BZ316872) ia77f09.b1 WGS-ZmaysF (JM107 adapted methyl filte... 36 0.028 4 (BJ336178) Dictyostelium discoideum cDNA clone:dda53c05, 5' ... 40 0.028 2 (DC223442) Plasmodium berghei strain ANKA cDNA clone:MZ00743... 36 0.028 4 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 42 0.028 5 (CG082687) PUFYE13TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 0.029 3 (CG281149) OG0AS68TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 42 0.029 3 (AC175843) Strongylocentrotus purpuratus clone R3-15M1, WORK... 36 0.029 11 (CR382398) Plasmodium falciparum chromosome 6, complete sequ... 36 0.030 9 (AY955840) Paracoccidioides brasiliensis strain Pb18 mitocho... 38 0.031 10 (AC172381) Strongylocentrotus purpuratus clone R3-1004M1, WO... 38 0.031 8 (ET108775) QM0AAC16BC01RM1 CCH3 Citrus clementina genomic cl... 38 0.031 4 (AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 0.033 8 (ET108942) QM0AAC16CC01RM1 CCH3 Citrus clementina genomic cl... 38 0.033 4 (CG324073) OGVCT01TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 36 0.033 4 (DW282483) UI-S-HH0-adj-j-11-0-UI.s1 UI-S-HH0 Euprymna scolo... 36 0.034 4 (AY160104) Dictyostelium discoideum nucleotide exchange fact... 46 0.036 7 (AC149963) Strongylocentrotus purpuratus clone R3-32B7, WORK... 52 0.036 3 (CC348691) OGPAY01TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 36 0.037 4 (AU269358) Dictyostelium discoideum vegetative cDNA clone:VS... 42 0.037 3 (EB799637) 5205719 ZF02 Danio rerio cDNA clone 2228783, mRNA... 36 0.038 4 (AU265671) Dictyostelium discoideum vegetative cDNA clone:VS... 38 0.038 3 (AP009281) Solanum lycopersicum genomic DNA, chromosome 8, c... 42 0.039 8 (BJ387337) Dictyostelium discoideum cDNA clone:dds1c22, 5' e... 32 0.043 4 (BM166487) EST569010 PyBS Plasmodium yoelii yoelii cDNA clon... 36 0.043 4 (BJ326474) Dictyostelium discoideum cDNA clone:dda16i18, 5' ... 40 0.043 3 (AC144899) Homo sapiens fosmid clone XXFOS-800385B1 from 7, ... 52 0.045 2 (AF090533) Dictyostelium discoideum unconventional myosin he... 42 0.045 4 (BX125897) Danio rerio genomic clone DKEY-74F23, genomic sur... 36 0.046 4 (C91113) Dictyostelium discoideum slug cDNA, clone SSJ587. 44 0.046 2 (FH124499) CHO_OF3044xa21f1.ab1 CHO_OF3 Nicotiana tabacum ge... 38 0.047 3 (CC342278) OGOBU37TVB ZM_0.7_1.5_KB Zea mays genomic clone Z... 36 0.048 4 (C92626) Dictyostelium discoideum slug cDNA, clone SSF544. 44 0.048 2 (CS468864) Sequence 55 from Patent EP1748080. 40 0.050 17 (CS419341) Sequence 55 from Patent WO2006094836. 40 0.050 17 (AC214282) Populus trichocarpa clone POP018-K04, complete se... 40 0.051 9 (C91552) Dictyostelium discoideum slug cDNA, clone SSK433. 44 0.051 2 (AY484462) Dictyostelium discoideum kinesin family member 8 ... 38 0.051 5 (FH677506) CHO_OF5052xf03r1.ab1 CHO_OF5 Nicotiana tabacum ge... 36 0.052 4 (U42597) Dictyostelium discoideum histidine kinase A (dhkA) ... 36 0.055 6 (AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 0.056 19 (C92035) Dictyostelium discoideum slug cDNA, clone SSC188. 44 0.056 2 (EI897328) VUH2-21M3TR VUUBBa (VUH2) Vigna unguiculata genom... 36 0.060 4 (EI897528) VUH2-21A6TR VUUBBa (VUH2) Vigna unguiculata genom... 36 0.061 4 (EI897268) VUH2-21A5TR VUUBBa (VUH2) Vigna unguiculata genom... 36 0.061 4 (CT684082) Danio rerio EST, clone ZF_mu_202j09 3'. 52 0.063 2 (AC179054) Strongylocentrotus purpuratus clone R3-4005I14, W... 42 0.063 2 (AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 42 0.063 5 (M13021) Plasmodium falciparum antigen CARP gene, partial cds. 36 0.064 4 (AC178938) Strongylocentrotus purpuratus clone R3-3115P7, WO... 42 0.064 2 (AC177311) Strongylocentrotus purpuratus clone R3-46D5, WORK... 42 0.065 2 (AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 38 0.065 21 (BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 46 0.066 23 (ET734768) CHO_OF438xe08r1.ab1 CHO_OF Nicotiana tabacum geno... 44 0.066 2 (FC818070) Sr_pAMT7_010m13_T7 S. ratti mixed stage pAMP Stro... 50 0.066 2 (AB017910) Dictyostelium discoideum myoM gene, complete cds. 42 0.068 4 (AF361475) Dictyostelium discoideum double histidine kinase ... 34 0.070 5 (CU929381) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.071 8 (CR391949) Zebrafish DNA sequence from clone CH211-149B20 in... 34 0.073 12 (AX345827) Sequence 898 from Patent WO0200928. 42 0.073 3 (L00652) Dictyostelium discoideum (crp) gene, complete cds. 44 0.074 2 (AY159040) Dictyostelium discoideum LvsD (lvsD) gene, partia... 36 0.076 7 (AC124957) Medicago truncatula clone mth2-15k14, complete se... 40 0.077 9 (CT754876) Paramecium tetraurelia 5-PRIME EST from clone LK0... 44 0.078 2 (AF185278) Debaryomyces hansenii Hog1p (HOG1) gene, complete... 36 0.079 2 (BJ416812) Dictyostelium discoideum cDNA clone:ddv27l09, 5' ... 38 0.079 3 (DW168475) CLVY6826.b1_D04.ab1 CLV(XYZ) lettuce virosa Lactu... 40 0.081 2 (CT803590) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.081 2 (Z98551) Plasmodium falciparum MAL3P6. 34 0.081 12 (CT782447) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.081 2 (CT746186) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.081 2 (DW168316) CLVY6677.b1_J13.ab1 CLV(XYZ) lettuce virosa Lactu... 40 0.081 2 (DY671155) STRBO05JX cold-stressed Fragaria vesca seedlings ... 40 0.081 2 (EX029175) BR013819 callus cDNA library KBCG Brassica rapa s... 38 0.081 2 (CT778129) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.081 2 (EV175592) 0160961 Brassica napus Etiolated seedlings (Uni-Z... 38 0.081 2 (EL361323) CCEM5960.b1_O02.ab1 CCE(LMS) endive Cichorium end... 40 0.081 2 (BQ870954) QGI10H24.yg.ab1 QG_ABCDI lettuce salinas Lactuca ... 40 0.081 2 (EX026052) BR010696 callus cDNA library KBCG Brassica rapa s... 38 0.081 2 (CT796918) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.081 2 (BQ852593) QGB18H04.yg.ab1 QG_ABCDI lettuce salinas Lactuca ... 40 0.082 2 (CT800008) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.082 2 (BQ855564) QGB27A10.yg.ab1 QG_ABCDI lettuce salinas Lactuca ... 40 0.082 2 (CX575907) TTE00034618 Amplicon Express - Conjugative Form T... 40 0.082 2 (EV041392) BNSCS3CT_UP_061_E08_04MAY2007_056 Brassica napus ... 38 0.082 2 (EV023929) BNSCS2CT_UP_112_C01_20APR2007_011 Brassica napus ... 38 0.082 2 (BJ439556) Dictyostelium discoideum cDNA clone:ddv40h22, 3' ... 40 0.082 2 (AI899007) EST268450 tomato ovary, TAMU Solanum lycopersicum... 40 0.082 2 (AI489461) EST247800 tomato ovary, TAMU Solanum lycopersicum... 40 0.083 2 (AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 38 0.083 10 (BP885298) Solanum lycopersicum cDNA, clone: FA31AD02, 5' en... 40 0.083 2 (AC179378) Strongylocentrotus purpuratus clone R3-1101L22, W... 36 0.086 7 (AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 40 0.088 4 (AC100797) Homo sapiens chromosome 8, clone RP11-43A14, comp... 52 0.088 8 (EL505445) G06_2272_1.AB1 Blood stage Plasmodium falciparum ... 36 0.089 4 (BJ364827) Dictyostelium discoideum cDNA clone:ddc33j04, 5' ... 36 0.092 3 (CP000882) Hemiselmis andersenii chromosome 2, complete sequ... 36 0.093 14 (AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 44 0.093 3 (AC219885) Bos taurus clone CH240-319E5, WORKING DRAFT SEQUE... 42 0.095 7 (AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 40 0.097 8 (BJ443577) Dictyostelium discoideum cDNA clone:ddv53j12, 3' ... 36 0.100 4 (EG405173) SAAH-aaa20a03.b1 Agen 0058 Schmidtea mediterranea... 34 0.100 4 (AM442180) Vitis vinifera contig VV78X054778.6, whole genome... 44 0.10 4 (AC181328) Strongylocentrotus purpuratus clone R3-4018C20, W... 36 0.10 9 (EL456862) CHTM9933.b1_J12.ab1 CHT(LMS) Jerusalem artichoke ... 40 0.10 3 (EU285446) Spea bombifrons clone Sb49 microsatellite sequence. 52 0.10 1 (CT573264) Zebrafish DNA sequence from clone DKEY-262J3 in l... 52 0.10 1 (BX323030) Zebrafish DNA sequence from clone DKEYP-77D7 in l... 52 0.10 1 (AL845512) Zebrafish DNA sequence from clone CH211-286M4 in ... 52 0.10 1 (BV254302) S235P647RH2.T0 ItalianGreyhound Canis familiaris ... 52 0.10 1 (AC134446) Mus musculus BAC clone RP24-173D10 from chromosom... 52 0.10 1 (AC120779) Mus musculus strain C57BL/6J clone rp23-194d11 ma... 52 0.10 1 (AC118543) Mus musculus strain C57BL/6J clone rp23-254b17 ma... 52 0.10 1 (AC196498) Pan troglodytes BAC clone CH251-338M21 from chrom... 52 0.10 1 (AC192576) Pan troglodytes BAC clone CH251-401O12 from chrom... 52 0.10 1 (AC184847) Pan troglodytes BAC clone CH251-382L20 from chrom... 52 0.10 1 (AC123979) Papio anubis clone rp41-59o15, complete sequence. 52 0.10 1 (AM443371) Vitis vinifera contig VV78X049528.2, whole genome... 52 0.10 1 (CS604694) Sequence 3680 from Patent WO2007039234. 52 0.10 1 (CS603046) Sequence 2032 from Patent WO2007039234. 52 0.10 1 (AF310894) Dictyostelium discoideum prespore-specific protei... 52 0.10 1 (AF104350) Dictyostelium discoideum prespore-specific protei... 52 0.10 1 (AP003733) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 52 0.10 1 (AL590703) Human DNA sequence from clone RP11-120J8 on chrom... 52 0.10 1 (AL138753) Human DNA sequence from clone RP11-3L8 on chromos... 52 0.10 1 (AL121758) Human DNA sequence from clone RP5-850E9 on chromo... 52 0.10 1 (AC211507) Homo sapiens BAC clone CH17-20M4 from chromosome ... 52 0.10 1 (AC211469) Homo sapiens BAC clone CH17-278H3 from chromosome... 52 0.10 1 (AC095044) Homo sapiens BAC clone RP11-132B16 from 7, comple... 52 0.10 1 (AC091738) Homo sapiens BAC clone RP11-535E8 from 7, complet... 52 0.10 1 (AC136924) Mus musculus chromosome 17 clone RP23-219G8 map 1... 52 0.10 1 (AC134973) Homo sapiens chromosome 17 clone RP11-60C11 map 1... 52 0.10 1 (AC117932) Papio anubis clone RP41-424P4, WORKING DRAFT SEQU... 52 0.10 1 (AC113847) Rattus norvegicus clone CH230-136N18, WORKING DRA... 52 0.10 1 (AC104559) Mus musculus chromosome 17 clone RP24-160C12 map ... 52 0.10 1 (AC087451) Homo sapiens chromosome 11 clone RP11-810P12 map ... 52 0.10 1 (AC051664) Homo sapiens chromosome 11 clone RP11-810P12, WOR... 52 0.10 1 (AP000425) Homo sapiens genomic DNA, chromosome 8q23, clone:... 52 0.10 1 (AC204236) Macaca mulatta clone CH250-49B21, WORKING DRAFT S... 52 0.10 1 (AC184432) Strongylocentrotus purpuratus clone R3-3090B11, W... 52 0.10 1 (AC179120) Strongylocentrotus purpuratus clone R3-4011I7, WO... 52 0.10 1 (AC177306) Strongylocentrotus purpuratus clone R3-46B7, WORK... 52 0.10 1 (AC174516) Strongylocentrotus purpuratus clone R3-1115G21, W... 52 0.10 1 (AC168635) Strongylocentrotus purpuratus clone R3-3018J9, WO... 52 0.10 1 (AC168045) Mus musculus chromosome 7 clone RP23-68O19 map 7,... 52 0.10 1 (AC021454) Homo sapiens chromosome 11 clone RP11-135C4 map 1... 52 0.10 1 (AC009814) Homo sapiens clone RP11-115G17, WORKING DRAFT SEQ... 52 0.10 1 (AC004588) Homo sapiens, *** SEQUENCING IN PROGRESS ***, 19 ... 52 0.10 1 (ED488989) MUGQ_CH252P118A19Sp6_CN78_080 CHORI-252 Vervet Mo... 52 0.10 1 (AG987684) Hemicentrotus pulcherrimus BAC clone: BUB1-10L08_... 52 0.10 1 (EH637594) EST8702 LK04 Laupala kohalensis cDNA clone 106102... 52 0.10 1 (EH012903) USDA-FP_182176 Lysiphlebus testaceipes adult whol... 52 0.10 1 (EG356013) P2004061802_SSH-SYN-Plate4_B8_T7p_A10_080 Onu-t15... 52 0.10 1 (DV175209) CV04001X1A01.f1 CV04-normalized library Cirsium a... 52 0.10 1 (AU061200) Dictyostelium discoideum slug cDNA, clone SLD526. 52 0.10 1 (GE780888) EST_ssal_rgf_847222 ssalrgf mixed_tissue full-len... 52 0.10 1 (EY339738) CAWY9867.fwd CAWY Helobdella robusta Subtracted E... 52 0.10 1 (EY339348) CAWY9611.fwd CAWY Helobdella robusta Subtracted E... 52 0.10 1 (EY330330) CAWY3398.fwd CAWY Helobdella robusta Subtracted E... 52 0.10 1 (EY329835) CAWY3020.fwd CAWY Helobdella robusta Subtracted E... 52 0.10 1 (EY328998) CAWY2006.fwd CAWY Helobdella robusta Subtracted E... 52 0.10 1 (EY327292) CAWY12524.fwd CAWY Helobdella robusta Subtracted ... 52 0.10 1 (EY325839) CAWY11196.fwd CAWY Helobdella robusta Subtracted ... 52 0.10 1 (EY325797) CAWY11168.fwd CAWY Helobdella robusta Subtracted ... 52 0.10 1 (DY886751) CeleSEQ2521 Cunninghamella elegans pBluescript (E... 40 0.11 3 (AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 36 0.11 7 (EL502365) B12_PFLAB1-M-PLATE6B.AB1 Blood stage Plasmodium f... 36 0.11 4 (AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.12 12 (EI911910) VUH2-40I5TV VUUBBa (VUH2) Vigna unguiculata genom... 32 0.12 4 (AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 38 0.12 12 (AU262327) Dictyostelium discoideum vegetative cDNA clone:VS... 36 0.12 3 (BX120011) Zebrafish DNA sequence from clone DKEY-18O5 in li... 38 0.13 12 (CT027792) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.13 6 (BJ422384) Dictyostelium discoideum cDNA clone:ddv45b19, 5' ... 38 0.13 3 (CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 36 0.13 24 (BJ396592) Dictyostelium discoideum cDNA clone:dds43p04, 5' ... 38 0.13 2 (AC176653) Strongylocentrotus purpuratus clone R3-3080P17, W... 42 0.13 8 (BJ365225) Dictyostelium discoideum cDNA clone:ddc34f17, 5' ... 42 0.13 2 (CS468863) Sequence 54 from Patent EP1748080. 40 0.13 16 (CS419340) Sequence 54 from Patent WO2006094836. 40 0.13 16 (BJ396805) Dictyostelium discoideum cDNA clone:dds44c05, 5' ... 38 0.14 2 (BJ392489) Dictyostelium discoideum cDNA clone:dds27h19, 5' ... 38 0.14 2 (DU515168) 1098609790355 CHORI-243 Ovis aries genomic clone ... 46 0.14 2 (CR405705) Zebrafish DNA sequence from clone DKEY-64E13 in l... 34 0.14 12 (BJ397067) Dictyostelium discoideum cDNA clone:dds44n19, 5' ... 38 0.14 2 (AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 44 0.14 3 (BJ396951) Dictyostelium discoideum cDNA clone:dds44e16, 5' ... 40 0.14 3 (BJ393907) Dictyostelium discoideum cDNA clone:dds33g06, 5' ... 38 0.14 2 (BJ370209) Dictyostelium discoideum cDNA clone:ddc53f09, 5' ... 38 0.14 2 (BJ397005) Dictyostelium discoideum cDNA clone:dds44a21, 5' ... 38 0.14 2 (BJ392150) Dictyostelium discoideum cDNA clone:dds26h13, 5' ... 38 0.14 2 (AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 42 0.14 7 (X02893) Candida glabrata mitochondrial gene for ribosomal p... 32 0.15 4 (BJ433594) Dictyostelium discoideum cDNA clone:ddv22i10, 3' ... 32 0.15 4 (DD010735) Diagnosis of known genetic Parameters within the ... 46 0.15 15 (AY232269) Dictyostelium discoideum putative protein Roco7 (... 32 0.15 7 (CP001056) Clostridium botulinum B str. Eklund 17B, complete... 38 0.16 18 (FH612397) CHO_OF4937xk19f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 0.16 4 (BQ739500) PfESToab46g03.y1 Plasmodium falciparum 3D7 asexua... 40 0.16 3 (AM454954) Vitis vinifera contig VV78X069115.6, whole genome... 42 0.16 3 (AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 40 0.16 5 (AX346829) Sequence 1900 from Patent WO0200928. 32 0.17 7 (ED368605) AUAC-aaj18d09.g1 Ascaris suum whole genome shotgu... 34 0.17 4 (EU254636) Plasmodium sp. myna caseinolytic protease C (clpc... 32 0.17 4 (BJ392492) Dictyostelium discoideum cDNA clone:dds27h24, 5' ... 40 0.17 2 (EL893837) CGF2003834_D08 WLN-02: walnut leaf from plants i... 42 0.17 2 (BJ392345) Dictyostelium discoideum cDNA clone:dds27f12, 5' ... 40 0.17 3 (AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61... 34 0.17 14 (CR749764) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 0.17 10 (AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 42 0.18 4 (AX392735) Sequence 25 from Patent WO0212526. 32 0.18 12 (AR707082) Sequence 25 from patent US 6933145. 32 0.18 12 (BJ392445) Dictyostelium discoideum cDNA clone:dds27n14, 5' ... 34 0.18 3 (AY232268) Dictyostelium discoideum putative protein Roco6 (... 32 0.18 7 (C91067) Dictyostelium discoideum slug cDNA, clone SSJ443. 32 0.18 4 (BX528377) RZPD Mus musculus cDNA clone IMAGp998L076274 = IM... 44 0.18 2 (BJ326689) Dictyostelium discoideum cDNA clone:dda17k16, 5' ... 36 0.19 3 (FH125702) CHO_OF3317xb03f1.ab1 CHO_OF3 Nicotiana tabacum ge... 30 0.20 4 (EY327858) CAWY12912.fwd CAWY Helobdella robusta Subtracted ... 36 0.20 3 (AL495218) T. brucei sheared genomic DNA clone 367a11, rever... 32 0.20 4 (CU466273) Zebrafish DNA sequence from clone DKEY-147B12 in ... 44 0.20 8 (BJ425457) Dictyostelium discoideum cDNA clone:ddv55d21, 5' ... 38 0.21 3 (AC100799) Homo sapiens chromosome 8, clone RP11-1082F24, co... 38 0.21 11 (BQ966031) QHB23M07.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 40 0.21 3 (AC115581) Dictyostelium discoideum chromosome 2 map complem... 44 0.21 9 (AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 36 0.21 9 (AC117082) Dictyostelium discoideum chromosome 2 map complem... 34 0.22 8 (BH945333) obv09e12.b1 B.oleracea002 Brassica oleracea genom... 38 0.22 2 (EJ555823) 1092959497583 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.22 2 (CJ356036) Molgula tectiformis cDNA, cleaving embryo clone:m... 50 0.22 2 (CT755306) Paramecium tetraurelia 5-PRIME EST from clone LK0... 40 0.22 2 (CT794353) Paramecium tetraurelia 5-PRIME EST from clone LK0... 40 0.23 2 (AC133862) Medicago truncatula clone mth2-30d7, complete seq... 40 0.23 8 (CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 34 0.23 23 (AR555258) Sequence 10389 from patent US 6747137. 34 0.23 4 (CR548621) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 0.23 2 (AC084159) Caenorhabditis elegans cosmid Y73B3A, complete se... 44 0.23 7 (AC136659) Rattus norvegicus clone CH230-183D6, *** SEQUENCI... 36 0.23 2 (EJ232874) 1092404037787 Global-Ocean-Sampling_GS-27-01-01-1... 42 0.24 2 (AU039138) Dictyostelium discoideum slug cDNA, clone SSM436. 44 0.24 4 (AL935166) Zebrafish DNA sequence from clone CH211-199C19 in... 36 0.24 2 (G37855) ARA3 Plasmodium falciparum haploid Plasmodium falci... 36 0.24 3 (AC180568) Strongylocentrotus purpuratus clone R3-3094P13, W... 36 0.24 10 (AE017243) Mycoplasma hyopneumoniae J, complete genome. 34 0.24 21 (EF067921) Thalassiosira pseudonana chloroplast, complete ge... 34 0.24 12 (CT742507) Paramecium tetraurelia 5-PRIME EST from clone LK0... 40 0.25 2 (EE621263) CHWM8389.b1_J10.ab1 CHW(LMS) silverleaf sunflower... 40 0.25 3 (AU039559) Dictyostelium discoideum slug cDNA, clone SLE748. 32 0.25 4 (CT779181) Paramecium tetraurelia 5-PRIME EST from clone LK0... 40 0.25 2 (AB265777) Brassica rapa DNA, clone: BrSTS-78(A9709), sequen... 38 0.25 2 (N98025) 2075C3 czapPFDd2.1, Debopam Chakrabarti Plasmodium ... 36 0.25 4 (AB265778) Brassica rapa DNA, clone: BrSTS-78(N-WMR-3), sequ... 38 0.25 2 (AM469302) Vitis vinifera contig VV78X049259.4, whole genome... 42 0.25 3 (AL034557) Plasmodium falciparum MAL4P1. 38 0.25 10 (EE621691) CHWM8784.b1_P12.ab1 CHW(LMS) silverleaf sunflower... 40 0.26 3 (DY886873) CeleSEQ2693 Cunninghamella elegans pBluescript (E... 40 0.26 2 (EE620594) CHWM7764.b1_G21.ab1 CHW(LMS) silverleaf sunflower... 40 0.26 3 (AC210332) Populus trichocarpa clone POP017-D18, complete se... 40 0.26 8 (AC202346) Medicago truncatula clone mth2-2n5, WORKING DRAFT... 34 0.26 10 (BQ972051) QHB9J17.yg.ab1 QH_ABCDI sunflower RHA801 Helianth... 40 0.26 3 (AL355478) Human DNA sequence from clone RP11-459J23 on chro... 40 0.27 11 (BJ392316) Dictyostelium discoideum cDNA clone:dds27p02, 5' ... 32 0.27 4 (AC188119) Trichinella spiralis chromosome UNK clone TS195-1... 36 0.28 10 (CU571152) M.truncatula DNA sequence from clone MTH2-44F3 on... 36 0.28 10 (CR931809) Medicago truncatula chromosome 5 clone mth2-35j21... 38 0.28 9 (BJ396037) Dictyostelium discoideum cDNA clone:dds41k06, 5' ... 36 0.28 4 (BJ446028) Dictyostelium discoideum cDNA clone:ddv61m08, 3' ... 36 0.28 3 (AY484460) Dictyostelium discoideum kinesin family member 3 ... 34 0.28 5 (AF036171) Dictyostelium discoideum homeobox-containing prot... 36 0.29 3 (AP008093) Lotus japonicus genomic DNA, chromosome 4, clone:... 36 0.29 6 (AM180355) Clostridium difficile 630 complete genome. 38 0.29 21 (X00466) Trypanosome VSG117 gene 5'-barren region. 36 0.29 4 (CJ456979) Macaca fascicularis mRNA, clone: QflA-22838, 5' e... 38 0.29 3 (AB113574) Lotus japonicus mRNA for Ser/Thr protein kinase, ... 38 0.30 2 (DX084228) AU_BAC004A1A01_Sp6 CHORI212 Ictalurus punctatus g... 38 0.30 3 (CJ453894) Macaca fascicularis mRNA, clone: QflA-19613, 5' e... 36 0.30 3 (AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 36 0.30 12 (DV986040) GQ0202.B3_G22 GQ020: Clean ROOTS systems -Diurnal... 38 0.30 2 (DV981985) GQ0167.B3_H21 GQ016: Primary, secondary SHOOT -N ... 38 0.30 2 (DV986039) GQ0207.B3_C18 GQ020: Clean ROOTS systems -Diurnal... 38 0.30 2 (AZ693147) ENTKV69TF Entamoeba histolytica Sheared DNA Entam... 38 0.30 2 (EX397304) GQ03409.B7_P12 GQ034 - Needles - Mid-season Picea... 38 0.30 2 (AZ691640) ENTJS64TF Entamoeba histolytica Sheared DNA Entam... 40 0.30 2 (BH135316) ENTOA57TF Entamoeba histolytica Sheared DNA Entam... 40 0.30 2 (DV981160) GQ0167.B3_M09 GQ016: Primary, secondary SHOOT -N ... 38 0.30 2 (DY918532) CHAY1874.b1_D14.ab1 CHA(XYZ) common wild sunflowe... 36 0.30 2 (EV525800) RR1AG08TF RR1(CS) Raphanus raphanistrum subsp. ma... 38 0.30 2 (EV525682) RR1AE76TF RR1(CS) Raphanus raphanistrum subsp. ma... 38 0.30 2 (EX392957) GQ03324.B7_B16 GQ033 - Terminal leader (Normalize... 38 0.30 2 (FH059695) CHO_OF3493xc09f1.ab1 CHO_OF3 Nicotiana tabacum ge... 38 0.30 2 (EX401703) GQ03502.B7_P12 GQ035 - Needles - End of season Pi... 38 0.30 2 (DR568712) WS02622.BR_J16 WS-PP-N-A-12 Picea glauca cDNA clo... 38 0.30 2 (EX898986) RS2BM56JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 38 0.30 2 (DV121859) CV03030A2D10.f1 CV03-normalized library Euphorbia... 38 0.30 2 (DN964665) 213g01w longbai no.2 one month old leaves Brassic... 38 0.30 2 (EE648745) CHEM8695.b1_M14.ab1 CHE(LMS) serpentine sunflower... 36 0.31 2 (AM676410) Entamoeba terrapinae GSS, clone terra118g10.q1k. 34 0.31 2 (AY159037) Dictyostelium discoideum LvsF (lvsF) gene, comple... 36 0.31 4 (CT816226) Paramecium tetraurelia 5-PRIME EST from clone LK0... 38 0.31 2 (FH528980) CHO_OF4359xk03r1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 0.31 2 (CT800536) Paramecium tetraurelia 5-PRIME EST from clone LK0... 36 0.31 2 (FG466196) 011124KAKA001560HT (KAKA) Dormant kiwifruit buds ... 40 0.31 2 (ER559140) 1093015734753 Global-Ocean-Sampling_GS-36-01-01-2... 50 0.31 2 (AC181155) Strongylocentrotus purpuratus clone R3-16C24, WOR... 40 0.31 8
>(BJ375465) Dictyostelium discoideum cDNA clone:ddc18f23, 3' end, single read. Length = 744
Score = 1469 bits (741), Expect = 0.0 Identities = 743/744 (99%) Strand = Plus / Minus
Query: 1655 ggaagtgctaaaattttagaatcaaatcatacaagtatgtcatatatttgttcaagatat 1714 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaagtgctaaaattttagaatcaaatcatacaagtatgtcatatatttgttcaagatat 685
Query: 1715 tatagagctcctgaattattagttggttgttcaaattatactactaaaattgatatttgg 1774 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 tatagagctcctgaattattagttggttgttcaaattatactactaaaattgatatttgg 625
Query: 1775 tcaattggatgtattttagcagaaatgttaattggtaaaccattattccctggtacaaat 1834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 tcaattggatgtattttagcagaaatgttaattggtaaaccattattccctggtacaaat 565
Query: 1835 tcaaatgatcaattgggtagaattattgaagtattaggatcaccaacaaaagatgatatg 1894 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 tcaaatgatcaattgggtagaattattgaagtattaggatcaccaacaaaagatgatatg 505
Query: 1895 gaagcaatgaaaccaagtaaaccataccatttacaattaccaaatattaatccaaagttt 1954 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 gaagcaatgaaaccaagtaaaccataccatttacaattaccaaatattaatccaaagttt 445
Query: 1955 ttcgaatcattacataatgttgaagataaaacagttgttgatttattatcaaaaattttc 2014 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ttcgaatcattacataatgttgaagataaaacagttgttgatttattatcaaaaattttc 385
Query: 2015 atttttgatcctgtaaagagagcatcgattgatgaaattattgcacacccatttttaaga 2074 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 atttttgatcctgtaaagagagcatcgattgatgaaattattgcacacccatttttaaga 325
Query: 2075 gatgtaaatataaatagtttagaattatttgatgaaatgaaatgtttttcagtatcaggt 2134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 gatgtaaatataaatagtttagaattatttgatgaaatgaaatgtttttcagtatcaggt 265
Query: 2135 aatggtaaatcatcattaacaacaaattcaacttcatcatcttcgacaactgctaatatg 2194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 aatggtaaatcatcattaacaacaaattcaacttcatcatcttcgacaactgctaatatg 205
Query: 2195 acctctttagcaagttcaagtagtaataataaaacaacttgctctgaaacttatctttca 2254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 acctctttagcaagttcaagtagtaataataaaacaacttgctctgaaacttatctttca 145
Query: 2255 agactaccaacaagcgcaatcacaagtagtagtaatttaaaaagtatagataatagtaat 2314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 agactaccaacaagcgcaatcacaagtagtagtaatttaaaaagtatagataatagtaat 85
Query: 2315 aatggaaaatcttcttcctcttcaaataatattccaagtttaaataatagtaataatggt 2374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 aatggaaaatcttcttcctcttcaaataatattccaagtttaaataatagtaataatggt 25
Query: 2375 gtaattacaaatactatttaaagt 2398 | |||||||||||||||||||||| Sbjct: 24 gnaattacaaatactatttaaagt 1
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 98226423 Number of Hits to DB: 2,965,455,599 Number of extensions: 198709099 Number of successful extensions: 21874004 Number of sequences better than 10.0: 2302 Length of query: 2517 Length of database: 98,766,808,389 Length adjustment: 25 Effective length of query: 2492 Effective length of database: 96,311,147,814 Effective search space: 240007380352488 Effective search space used: 240007380352488 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 7.17 |
Homology vs Protein |
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
3 |
AF (FL, S) |
2 |
SL (DIR, L) |
1 |
SS (DIR, S) |
7 |
SH (FL, L) |
3 |
SF (FL, S) |
0 |
CH (FL, L) |
2 |
CF (FL, S) |
2 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |