Contig-U15697-1
Contig ID Contig-U15697-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15697-1 (Contig-U15697-1Q) /CSM_Contig/Contig-U15697-1Q.Seq.d
AAAATTTTAAATTTAATTGAAGTGTTTGTGCACTGTTTAATAAGATAAAA
ATCTGATGAATGTTAGATTCTCCTCTCAAAGATTCCCTGTTAATTTAGAG
GTAAAAGAGGGATCAGGATCAATATTTGGATGTGTAATTCAACCATTTAA
AAACAATTTTAGGTATCAAGAAAATTCAAAAAACATAGGTAGATGTAAAA
AATGTTTTGCTTATATAAATAATTTAGTGAAATTTGAACGTGGTGGTTGG
AGATGTAATATATGTGAATCATTAAATAAGATAAATTATACAGGTTTTAA
TATTGATAATGATAATGATAATGATAGTGATAATGATAATTATAATAATA
ACCAATACAATCAACAACAACAACAACAACAAATATCAAGATATGCAAGA
CCAAATAGAGAATCATTACCAGAATTATCAAATTATTCAATTGAATTATT
AGTTGATCAAGACCAATTTGATGGTAGTAGTAGTGGTGGTGGTGGTGATT
ATGATAATACTCAACAAGAATCATCATCGTCATCATCATTACCAGATTCA
ATACCATATTCAATGATACCATTGATAAATAATCCAATTTATATTGCAGT
TGTAGATTATTCAGGTAATGAAGAACAACATGATGCAAT----------A
GAGAAAAGATTACATATATTTAATATTAGAGTACCAGTTGCAGATACACC
AATTGAAGTATTTAATTCAATTGATTTAGAGACAACCATTTCATTACTTA
CAAATAAGATAATAAGAGAAACTTTAGAAAAAGGTATTTCAGAGGCAAGA
ATTTCACTAGTTGATTGGTTAAAGAATATCATTACAAAATATAACGAAAA
CGTTGTAATATTGTCATCGGTAACTTCATCTATTGATGTAAACTTTTCAC
AAGTCTCTCATTTAAGACCATTACCAAGATACGTATTTGCATTGATGAAA
TCACCAATACTTAGGGAACTAACAACCGATATTGAAGCATCAACCATAAA
GAAGAAATCTGATGAATGGATTTATCATCAATGTTTATATTCCAACACTA
GAGCCACGTTTATTACATCGTTCAATCTATCCAGTATTGTATAGTTATGG
TGCACCAAATAATTTAGCTTCAAAATATTTACCATTATCTCAAAATACAA
TACTCACAAGTACATCTCATATCTATTTAGTTGATAGTTTTGATCAACTT
GTGGTTTTCTATAATCTTCAAGAGGTTTCTTCACATCATCAATTCCCACC
ACCACCTGAAAGTTTAATTCGTCAAACCATTTCAAATAGTAAACAAGATC
GTTTAATTGTACCAGAAATTCCAATATCTTAAAGGTAAATTAATTGAAAA
TCCAATTGAATTCACTAAATTTTTAATTGATGAAGAAAATAATGCTGGTC
CATCATTTTATAATTTCTTAAGAGATATTTCTTCAAATGTTAAAGGTAGA
TTTTAAAAAAAAAAAAATAAATCTAATAATAATAATAATAATAATAAAAA
AAAAAAAAAAAAAAAA

Gap gap included
Contig length 1506
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 4344366
End point 4342881
Strand (PLUS/MINUS) MINUS
Number of clones 5
Number of EST 7
Link to clone list U15697
List of clone(s)

est1=SHG320F,1,608
est2=AHA567F,2,608
est3=CHO303F,28,538
est4=VFN864F,55,639
est5=AHA567Z,640,1435
est6=CHO303Z,816,1398
est7=FC-AF11Z,1004,1506
Translated Amino Acid sequence
kf*i*lkclctv**DKNLMNVRFSSQRFPVNLEVKEGSGSIFGCVIQPFKNNFRYQENSK
NIGRCKKCFAYINNLVKFERGGWRCNICESLNKINYTGFNIDNDNDNDSDNDNYNNNQYN
QQQQQQQISRYARPNRESLPELSNYSIELLVDQDQFDGSSSGGGGDYDNTQQESSSSSSL
PDSIPYSMIPLINNPIYIAVVDYSGNEEQHDA---

---EKRLHIFNIRVPVADTPIEVFNSIDLETTISLLTNKIIRETLEKGISEARISLVDWL
KNIITKYNENVVILSSVTSSIDVNFSQVSHLRPLPRYVFALMKSPILRELTTDIEASTIK
KKSDEWIYHQCLYSNTRATFITSFNLSSIV*lwctk*fsfkiftiiskynthkyisylfs
**f*stcgfl*ssrgfftssipttt*kfnssnhfk**trsfnctrnsnilkvn*lkiqln
slnf*lmkkimlvhhfiis*eiflqmlkvdfkkkkinliiiiiiikkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
kilnlievfvhclir*ksdec*illskipc*frgkrgiriniwmcnsti*kqf*vsrkfk
khr*m*kmfclyk*fsei*twwlem*ym*iik*dklyrf*y************l***piq
sttttttnikicktk*riitriiklfn*iis*srpi*w***wwww*l**ystriiiviii
trfntifndtidk*snlycscrlfr**rtt*cn---

---rekityi*y*stscrytn*si*fn*frdnhfityk*dnkrnfrkryfrgknfts*lv
keyhyki*rkrcnivignfiy*cklftslsfktitkiricideitnt*gtnnry*sinhk
eei**mdlssmfifqh*shvyyivqsiqycivmvhqii*lqniyhylkiqysqvhlisi*
livlinlwfsiifkrflhiinshhhlkv*fvkpfqivnkiv*lyqkfqylkgklienpie
ftkflideennagpsfynflrdissnvkgrf*kkknksnnnnnnnkkkkkkk

Frame B:
kf*i*lkclctv**DKNLMNVRFSSQRFPVNLEVKEGSGSIFGCVIQPFKNNFRYQENSK
NIGRCKKCFAYINNLVKFERGGWRCNICESLNKINYTGFNIDNDNDNDSDNDNYNNNQYN
QQQQQQQISRYARPNRESLPELSNYSIELLVDQDQFDGSSSGGGGDYDNTQQESSSSSSL
PDSIPYSMIPLINNPIYIAVVDYSGNEEQHDA---

---EKRLHIFNIRVPVADTPIEVFNSIDLETTISLLTNKIIRETLEKGISEARISLVDWL
KNIITKYNENVVILSSVTSSIDVNFSQVSHLRPLPRYVFALMKSPILRELTTDIEASTIK
KKSDEWIYHQCLYSNTRATFITSFNLSSIV*lwctk*fsfkiftiiskynthkyisylfs
**f*stcgfl*ssrgfftssipttt*kfnssnhfk**trsfnctrnsnilkvn*lkiqln
slnf*lmkkimlvhhfiis*eiflqmlkvdfkkkkinliiiiiiikkkkkk

Frame C:
nfkfn*svcalfnkiki**mldsplkdslli*r*krdqdqyldv*fnhlktilgikkiqk
t*vdvknvlli*ii**nlnvvvgdviyvnh*ir*iiqvlilimimimivimiiiiitnti
nnnnnnkyqdmqdqienhyqnyqiiqlny*liktnlmvvvvvvvvimiilnknhhrhhhy
qiqyhiq*yh**iiqfilql*iiqvmknnmmq---

---rkdyiylileyqlqihqlkyliqli*rqpfhylqir**ekl*kkvfqrqefh*lig*
rislqnitktl*ychr*lhllm*tfhksli*dhyqdtylh**nhqylgn*qpilkhqp*r
rnlmngfiinvyiptleprllhrsiypvlysygapnnlaskylplsqntiltstshiylv
dsfdqlvvfynlqevsshhqfppppeslirqtisnskqdrlivpeipis*r*in*ksn*i
h*ifn**rk*cwsiil*flkryffkc*r*ilkkkk*i********kkkkkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15697-1 (Contig-U15697-1Q)
/CSM_Contig/Contig-U15697-1Q.Seq.d
(1516 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15697-1 (Contig-U15697-1Q) /CSM_Contig/Conti... 2066 0.0
Contig-U03047-1 (Contig-U03047-1Q) /CSM_Contig/Conti... 56 2e-07
Contig-U15359-1 (Contig-U15359-1Q) /CSM_Contig/Conti... 52 3e-06
Contig-U15287-1 (Contig-U15287-1Q) /CSM_Contig/Conti... 52 3e-06
Contig-U12054-1 (Contig-U12054-1Q) /CSM_Contig/Conti... 52 3e-06
Contig-U10541-1 (Contig-U10541-1Q) /CSM_Contig/Conti... 50 1e-05
Contig-U16390-1 (Contig-U16390-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U15926-1 (Contig-U15926-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U15831-1 (Contig-U15831-1Q) /CSM_Contig/Conti... 48 4e-05
Contig-U15813-1 (Contig-U15813-1Q) /CSM_Contig/Conti... 48 4e-05

>Contig-U15697-1 (Contig-U15697-1Q) /CSM_Contig/Contig-U15697-1Q.Seq.d
Length = 1516

Score = 2066 bits (1042), Expect = 0.0
Identities = 1072/1072 (100%)
Strand = Plus / Plus


Query: 383 atatcaagatatgcaagaccaaatagagaatcattaccagaattatcaaattattcaatt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atatcaagatatgcaagaccaaatagagaatcattaccagaattatcaaattattcaatt 442


Query: 443 gaattattagttgatcaagaccaatttgatggtagtagtagtggtggtggtggtgattat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaattattagttgatcaagaccaatttgatggtagtagtagtggtggtggtggtgattat 502


Query: 503 gataatactcaacaagaatcatcatcgtcatcatcattaccagattcaataccatattca 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gataatactcaacaagaatcatcatcgtcatcatcattaccagattcaataccatattca 562


Query: 563 atgataccattgataaataatccaatttatattgcagttgtagattattcaggtaatgaa 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atgataccattgataaataatccaatttatattgcagttgtagattattcaggtaatgaa 622


Query: 623 gaacaacatgatgcaatnnnnnnnnnnagagaaaagattacatatatttaatattagagt 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaacaacatgatgcaatnnnnnnnnnnagagaaaagattacatatatttaatattagagt 682


Query: 683 accagttgcagatacaccaattgaagtatttaattcaattgatttagagacaaccatttc 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 accagttgcagatacaccaattgaagtatttaattcaattgatttagagacaaccatttc 742


Query: 743 attacttacaaataagataataagagaaactttagaaaaaggtatttcagaggcaagaat 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 attacttacaaataagataataagagaaactttagaaaaaggtatttcagaggcaagaat 802


Query: 803 ttcactagttgattggttaaagaatatcattacaaaatataacgaaaacgttgtaatatt 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ttcactagttgattggttaaagaatatcattacaaaatataacgaaaacgttgtaatatt 862


Query: 863 gtcatcggtaacttcatctattgatgtaaacttttcacaagtctctcatttaagaccatt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gtcatcggtaacttcatctattgatgtaaacttttcacaagtctctcatttaagaccatt 922


Query: 923 accaagatacgtatttgcattgatgaaatcaccaatacttagggaactaacaaccgatat 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 accaagatacgtatttgcattgatgaaatcaccaatacttagggaactaacaaccgatat 982


Query: 983 tgaagcatcaaccataaagaagaaatctgatgaatggatttatcatcaatgtttatattc 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 tgaagcatcaaccataaagaagaaatctgatgaatggatttatcatcaatgtttatattc 1042


Query: 1043 caacactagagccacgtttattacatcgttcaatctatccagtattgtatagttatggtg 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 caacactagagccacgtttattacatcgttcaatctatccagtattgtatagttatggtg 1102


Query: 1103 caccaaataatttagcttcaaaatatttaccattatctcaaaatacaatactcacaagta 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 caccaaataatttagcttcaaaatatttaccattatctcaaaatacaatactcacaagta 1162


Query: 1163 catctcatatctatttagttgatagttttgatcaacttgtggttttctataatcttcaag 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 catctcatatctatttagttgatagttttgatcaacttgtggttttctataatcttcaag 1222


Query: 1223 aggtttcttcacatcatcaattcccaccaccacctgaaagtttaattcgtcaaaccattt 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 aggtttcttcacatcatcaattcccaccaccacctgaaagtttaattcgtcaaaccattt 1282


Query: 1283 caaatagtaaacaagatcgtttaattgtaccagaaattccaatatcttaaaggtaaatta 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 caaatagtaaacaagatcgtttaattgtaccagaaattccaatatcttaaaggtaaatta 1342


Query: 1343 attgaaaatccaattgaattcactaaatttttaattgatgaagaaaataatgctggtcca 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 attgaaaatccaattgaattcactaaatttttaattgatgaagaaaataatgctggtcca 1402


Query: 1403 tcattttataatttcttaagagatatttcttcaaatgttaaaggtagatttt 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 tcattttataatttcttaagagatatttcttcaaatgttaaaggtagatttt 1454


Score = 587 bits (296), Expect = e-167
Identities = 296/296 (100%)
Strand = Plus / Plus


Query: 1 aaaattttaaatttaattgaagtgtttgtgcactgtttaataagataaaaatctgatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaattttaaatttaattgaagtgtttgtgcactgtttaataagataaaaatctgatgaa 60


Query: 61 tgttagattctcctctcaaagattccctgttaatttagaggtaaaagagggatcaggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttagattctcctctcaaagattccctgttaatttagaggtaaaagagggatcaggatc 120


Query: 121 aatatttggatgtgtaattcaaccatttaaaaacaattttaggtatcaagaaaattcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatatttggatgtgtaattcaaccatttaaaaacaattttaggtatcaagaaaattcaaa 180


Query: 181 aaacataggtagatgtaaaaaatgttttgcttatataaataatttagtgaaatttgaacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacataggtagatgtaaaaaatgttttgcttatataaataatttagtgaaatttgaacg 240


Query: 241 tggtggttggagatgtaatatatgtgaatcattaaataagataaattatacaggtt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggtggttggagatgtaatatatgtgaatcattaaataagataaattatacaggtt 296


Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 1468 taaatctaataataataataataataat 1495
||||||||||||||||||||||||||||
Sbjct: 1468 taaatctaataataataataataataat 1495


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1474 taataataataataataataa 1494
|||||||||||||||||||||
Sbjct: 1477 taataataataataataataa 1497


>Contig-U03047-1 (Contig-U03047-1Q) /CSM_Contig/Contig-U03047-1Q.Seq.d
Length = 1604

Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 470 gatggtagtagtagtggtggtggtggtg 497
||||||||||||||||||||||||||||
Sbjct: 279 gatggtagtagtagtggtggtggtggtg 306


Score = 38.2 bits (19), Expect = 0.039
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 474 gtagtagtagtggtggtggtggt 496
|||||||| ||||||||||||||
Sbjct: 286 gtagtagtggtggtggtggtggt 308


Score = 36.2 bits (18), Expect = 0.15
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 1474 taataataataataataataat 1495
||||||||||||| ||||||||
Sbjct: 8 taataataataatgataataat 29


Score = 36.2 bits (18), Expect = 0.15
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 1474 taataataataataataataat 1495
|||||||||| |||||||||||
Sbjct: 11 taataataatgataataataat 32


Score = 32.2 bits (16), Expect = 2.4
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 1476 ataataataataataataat 1495
|||||||||||||| |||||
Sbjct: 7 ataataataataatgataat 26


Score = 32.2 bits (16), Expect = 2.4
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 1474 taataataataataataata 1493
||||||| ||||||||||||
Sbjct: 14 taataatgataataataata 33


Score = 32.2 bits (16), Expect = 2.4
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 1476 ataataataataataataat 1495
||||| ||||||||||||||
Sbjct: 1 ataatgataataataataat 20


Score = 30.2 bits (15), Expect = 9.5
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 1474 taataataataataataat 1492
|||| ||||||||||||||
Sbjct: 2 taatgataataataataat 20


>Contig-U15359-1 (Contig-U15359-1Q) /CSM_Contig/Contig-U15359-1Q.Seq.d
Length = 1420

Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus


Query: 464 caatttgatggtagtagtagtggtggtggtggtg 497
||||||||| |||||||||||||||| |||||||
Sbjct: 869 caatttgatagtagtagtagtggtggaggtggtg 902


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 71,678
Number of Sequences: 8402
Number of extensions: 71678
Number of successful extensions: 29169
Number of sequences better than 10.0: 2683
length of query: 1516
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1500
effective length of database: 7,941,110
effective search space: 11911665000
effective search space used: 11911665000
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 2.10
Homology vs DNA
Query= Contig-U15697-1 (Contig-U15697-1Q) /CSM_Contig/Contig-U15697-1Q.Seq.d
(1516 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ348219) Dictyostelium discoideum cDNA clone:dda32e17, 3' ... 779 0.0 4
(BJ394676) Dictyostelium discoideum cDNA clone:dds36h05, 5' ... 539 0.0 2
(BJ330728) Dictyostelium discoideum cDNA clone:dda32e17, 5' ... 537 0.0 2
(BJ417769) Dictyostelium discoideum cDNA clone:ddv28p16, 5' ... 509 0.0 2
(C23760) Dictyostelium discoideum gamete cDNA, clone FC-AF11. 872 0.0 1
(BJ384601) Dictyostelium discoideum cDNA clone:ddc50f01, 3' ... 460 0.0 4
(BJ369305) Dictyostelium discoideum cDNA clone:ddc50f01, 5' ... 486 0.0 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 40 5e-06 16
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 46 1e-05 2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 42 1e-05 12
(AE014298) Drosophila melanogaster chromosome X, complete se... 54 4e-05 2
(EY309789) CAWX21787.fwd CAWX Helobdella robusta Primary Ear... 62 6e-05 1
(EY309788) CAWX21787.rev CAWX Helobdella robusta Primary Ear... 62 6e-05 1
(EY301985) CAWX15891.rev CAWX Helobdella robusta Primary Ear... 62 6e-05 1
(AC096982) Rattus norvegicus clone CH230-168I24, *** SEQUENC... 42 2e-04 9
(GE819051) EST_scau_evk_972646 scauevk mixed_tissue Sebastes... 60 3e-04 1
(EY297101) CAWX13176.fwd CAWX Helobdella robusta Primary Ear... 52 5e-04 2
(DB938528) Manihot esculenta mRNA, clone: CAS01_052_B13, 5'end. 58 0.001 1
(DB937534) Manihot esculenta mRNA, clone: CAS01_049_F09, 5'end. 58 0.001 1
(DB934473) Manihot esculenta mRNA, clone: CAS01_040_N07, 5'end. 58 0.001 1
(DB929166) Manihot esculenta mRNA, clone: CAS01_026_F02, 5'end. 58 0.001 1
(FE832997) CCAG44373.b1 CCAG Petrolisthes cinctipes heart, g... 58 0.001 1
(FE795168) CCAG20037.b1 CCAG Petrolisthes cinctipes heart, g... 58 0.001 1
(FE791708) CCAG18291.b1 CCAG Petrolisthes cinctipes heart, g... 58 0.001 1
(FE785113) CCAG14193.b7 CCAG Petrolisthes cinctipes heart, g... 58 0.001 1
(FE768643) CCAG4470.b3 CCAG Petrolisthes cinctipes heart, gi... 58 0.001 1
(FE762823) CCAG1134.b7 CCAG Petrolisthes cinctipes heart, gi... 58 0.001 1
(AC181164) Strongylocentrotus purpuratus clone R3-16B13, WOR... 46 0.001 6
(AC114265) Dictyostelium discoideum chromosome 2 map 4520461... 40 0.001 5
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 40 0.002 12
(AC157801) Mus musculus chromosome 1 clone RP24-293O1 map 1,... 56 0.003 3
(AC201043) Strongylocentrotus purpuratus clone R3-12L6, WORK... 48 0.003 4
(AC126491) Rattus norvegicus clone CH230-298P14, *** SEQUENC... 48 0.003 6
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 48 0.003 14
(AC225444) Mus musculus FOSMID clone WI1-1248M21 from chromo... 56 0.004 1
(AC129933) Mus musculus chromosome 1, clone RP23-234P14, com... 56 0.004 1
(AX647245) Sequence 1437 from Patent EP1270724. 56 0.004 1
(CU468516) Wallaby DNA sequence from clone MEKBa-266M20AB. 56 0.004 1
(AC019043) Homo sapiens BAC clone RP11-11B21 from 7, complet... 56 0.004 1
(AC140160) Rattus norvegicus clone CH230-473E8, *** SEQUENCI... 56 0.004 1
(AC201069) Strongylocentrotus purpuratus clone R3-13A18, WOR... 56 0.004 1
(AU061065) Dictyostelium discoideum slug cDNA, clone SLC791. 56 0.004 1
(BJ387593) Dictyostelium discoideum cDNA clone:dds3h18, 5' e... 56 0.004 1
(AC217713) Solanum tuberosum chromosome 1 clone RH073J01, **... 44 0.008 5
(AC118335) Rattus norvegicus clone CH230-96I14, WORKING DRAF... 38 0.010 2
(AR553043) Sequence 8174 from patent US 6747137. 46 0.011 2
(AC109558) Rattus norvegicus clone CH230-325D11, WORKING DRA... 38 0.011 2
(AC012417) Homo sapiens chromosome 18, clone RP11-408H20, co... 40 0.011 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.013 15
(AC214067) MACACA MULATTA BAC clone CH250-231L23 from chromo... 52 0.013 3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 42 0.014 12
(AC123400) Rattus norvegicus clone CH230-404I15, *** SEQUENC... 50 0.014 4
(AC185539) Drosophila melanogaster clone BACR22O16, complete... 54 0.016 1
(AC092494) Drosophila melanogaster clone BACR23I18, complete... 54 0.016 1
(AC110100) Rattus norvegicus clone CH230-212E13, WORKING DRA... 54 0.016 1
(AC098134) Rattus norvegicus clone CH230-163E23, WORKING DRA... 54 0.016 1
(AL844506) Plasmodium falciparum chromosome 7. 54 0.016 1
(AC021704) Homo sapiens clone RP11-335F8, WORKING DRAFT SEQU... 54 0.016 1
(AC012831) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 54 0.016 1
(BU237979) Ds01_13c12_A Ds01_AAFC_ECORC_cold_stressed_Flixwe... 54 0.016 1
(EY357612) CAWZ500.rev CAWZ Helobdella robusta Primary Late ... 54 0.016 1
(EY346798) CAWZ15269.fwd CAWZ Helobdella robusta Primary Lat... 54 0.016 1
(EY346797) CAWZ15269.rev CAWZ Helobdella robusta Primary Lat... 54 0.016 1
(EY323095) CAWX8808.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY321408) CAWX7884.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY321142) CAWX7744.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY320774) CAWX7556.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY320035) CAWX7189.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY319912) CAWX7126.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY319894) CAWX7115.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY318890) CAWX6610.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY318691) CAWX6507.rev CAWX Helobdella robusta Primary Earl... 54 0.016 1
(EY317840) CAWX539.rev CAWX Helobdella robusta Primary Early... 54 0.016 1
(EY317475) CAWX27594.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY317444) CAWX27575.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY316623) CAWX26730.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY316150) CAWX26454.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY315083) CAWX25866.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY313525) CAWX25007.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY312377) CAWX23982.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY312289) CAWX23936.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY312211) CAWX23891.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY311749) CAWX23639.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY310058) CAWX21937.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY309818) CAWX21804.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY308914) CAWX21293.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY307650) CAWX20592.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY307162) CAWX20314.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY305729) CAWX19535.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY304118) CAWX17477.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY303694) CAWX16852.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY303254) CAWX16609.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY303195) CAWX16578.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY303074) CAWX16509.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY298166) CAWX13761.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY297791) CAWX13557.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY297709) CAWX13510.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY295855) CAWX12486.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY295796) CAWX12450.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY294667) CAWX11815.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY294630) CAWX11794.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY294606) CAWX11781.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY292608) CAWX10647.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(EY292352) CAWX10506.rev CAWX Helobdella robusta Primary Ear... 54 0.016 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 38 0.018 16
(AC177308) Strongylocentrotus purpuratus clone R3-1033B15, W... 44 0.020 5
(EY374186) CAXA14945.rev CAXA Helobdella robusta Subtracted ... 42 0.022 2
(CT573100) Mouse DNA sequence from clone RP23-218E7 on chrom... 44 0.025 5
(AC125758) Rattus norvegicus clone CH230-116A14, WORKING DRA... 48 0.030 4
(AB030033) Dictyostelium discoideum gene for AmiB, complete ... 38 0.032 4
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 36 0.038 2
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 36 0.039 2
(AE014850) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.039 2
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18... 36 0.039 2
(AC137107) Mus musculus chromosome 5, clone RP23-274I21, com... 38 0.039 2
(AC144815) Mus musculus BAC clone RP24-289M2 from 12, comple... 38 0.040 2
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255... 36 0.043 2
(AC181496) Strongylocentrotus purpuratus clone R3-1111E20, W... 42 0.046 6
(AC139847) Mus musculus BAC clone RP23-387P21 from chromosom... 52 0.046 6
(AC181229) Strongylocentrotus purpuratus clone R3-115L20, WO... 46 0.058 6
(CU539059) Zebrafish DNA sequence from clone CH1073-386G6 in... 52 0.062 1
(AB137413) Homo sapiens DNA, STS on chromosome 15, D15S0529i... 52 0.062 1
(AL645903) Mouse DNA sequence from clone RP23-179M4 on chrom... 52 0.062 1
(AC166798) Mus musculus chromosome 3, clone RP23-442J19, com... 52 0.062 1
(AC155846) Mus musculus 6 BAC RP24-218D17 (Roswell Park Canc... 52 0.062 1
(AC112926) Mus musculus chromosome 3, clone RP23-215M7, comp... 52 0.062 1
(AC110160) Mus musculus chromosome 1, clone RP23-66A20, comp... 52 0.062 1
(AP009661) Lotus japonicus genomic DNA, chromosome 1, clone:... 52 0.062 1
(AP007151) Aspergillus oryzae RIB40 genomic DNA, SC005. 52 0.062 1
(DJ469277) Method for analysing genome using microsatellite ... 52 0.062 1
(AX647283) Sequence 1475 from Patent EP1270724. 52 0.062 1
(AJ534950) Dictyostelium discoideum mRNA for NAD(+) ADP-ribo... 52 0.062 1
(AF247471) Coptotermes formosanus clone Cf11-1 microsatellit... 52 0.062 1
(AC124057) Homo sapiens chromosome 11, clone RP5-915F1, comp... 52 0.062 1
(AC109491) Homo sapiens chromosome 5 clone RP11-727F19, comp... 52 0.062 1
(AC091012) Homo sapiens chromosome 11, clone RP11-113A6, com... 52 0.062 1
(AC087286) Homo sapiens chromosome 15, clone RP11-815J21, co... 52 0.062 1
(AC021739) Homo sapiens chromosome 15, clone RP11-158M2, com... 52 0.062 1
(AC003693) Human Chromosome 11p15.5 PAC clone pDJ915f1 conta... 52 0.062 1
(AC146997) Arbacia punctulata clone BAP-144G2, WORKING DRAFT... 52 0.062 1
(AC135404) Rattus norvegicus clone CH230-260I14, *** SEQUENC... 52 0.062 1
(AC132999) Rattus norvegicus clone CH230-5A19, WORKING DRAFT... 52 0.062 1
(AC132708) Rattus norvegicus clone CH230-479N5, *** SEQUENCI... 52 0.062 1
(AC128626) Rattus norvegicus clone CH230-262D20, WORKING DRA... 52 0.062 1
(AC127156) Rattus norvegicus clone CH230-7B10, *** SEQUENCIN... 52 0.062 1
(AC123129) Rattus norvegicus clone CH230-244G14, WORKING DRA... 52 0.062 1
(AC119130) Rattus norvegicus clone CH230-414I23, *** SEQUENC... 52 0.062 1
(AC117579) Mus musculus chromosome 3 clone RP23-37P22 map 3,... 52 0.062 1
(AC114113) Rattus norvegicus clone CH230-186O3, WORKING DRAF... 52 0.062 1
(AC112754) Rattus norvegicus clone CH230-329J3, WORKING DRAF... 52 0.062 1
(AC112456) Rattus norvegicus clone CH230-110N23, *** SEQUENC... 52 0.062 1
(AC112086) Rattus norvegicus clone CH230-332D11, *** SEQUENC... 52 0.062 1
(AC111884) Rattus norvegicus clone CH230-26L18, WORKING DRAF... 52 0.062 1
(AC105575) Rattus norvegicus clone CH230-235C3, *** SEQUENCI... 52 0.062 1
(AC103214) Rattus norvegicus clone CH230-13K21, *** SEQUENCI... 52 0.062 1
(AC101610) Mus musculus clone RP23-198K6, LOW-PASS SEQUENCE ... 52 0.062 1
(AC095424) Rattus norvegicus clone CH230-7A8, *** SEQUENCING... 52 0.062 1
(AC068402) Homo sapiens chromosome 15 clone RP11-509N23 map ... 52 0.062 1
(AC044822) Homo sapiens chromosome 15 clone RP11-270N14 map ... 52 0.062 1
(AC026840) Homo sapiens chromosome 15 clone RP11-526M10 map ... 52 0.062 1
(AC026645) Homo sapiens chromosome 11 clone RP11-113A6, WORK... 52 0.062 1
(CU539058) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.062 1
(AC218553) Bos taurus clone CH240-311O4, WORKING DRAFT SEQUE... 52 0.062 1
(AC191385) Pan troglodytes chromosome 11 clone CH251-510M10,... 52 0.062 1
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO... 52 0.062 1
(AC180799) Strongylocentrotus purpuratus clone R3-3024C22, W... 52 0.062 1
(AC180602) Strongylocentrotus purpuratus clone R3-3092N05, W... 52 0.062 1
(AC179811) Strongylocentrotus purpuratus clone R3-1013K2, WO... 52 0.062 1
(AC179606) Strongylocentrotus purpuratus clone R3-1028P05, W... 52 0.062 1
(AC176778) Strongylocentrotus purpuratus clone R3-3104M12, W... 52 0.062 1
(AC166647) Mus musculus chromosome 3 clone RP23-5I9 map 3, *... 52 0.062 1
(AC163182) Bos taurus clone CH240-115K23, WORKING DRAFT SEQU... 52 0.062 1
(AC022221) Homo sapiens chromosome 15 clone RP11-815J21, WOR... 52 0.062 1
(AC007897) Homo sapiens clone RP11-100A1, WORKING DRAFT SEQU... 52 0.062 1
(AK278037) Gryllus bimaculatus mRNA, GBcontig24898. 52 0.062 1
(DH479879) Monosiga ovata DNA, fosmid clone: MOF-032E11, gen... 52 0.062 1
(DH478742) Monosiga ovata DNA, fosmid clone: MOF-030F09, gen... 52 0.062 1
(DH477779) Monosiga ovata DNA, fosmid clone: MOF-028J10, gen... 52 0.062 1
(DH464435) Monosiga ovata DNA, fosmid clone: MOF-005B13, gen... 52 0.062 1
(DE865192) Macropus eugenii DNA, BAC clone: MEB1-033C11_F, 5... 52 0.062 1
(DE236563) Trifolium pratense DNA, clone:RCG32026. 52 0.062 1
(EH403794) EST1916 Schizochytrium cDNA library Schizochytriu... 52 0.062 1
(EH403638) EST1760 Schizochytrium cDNA library Schizochytriu... 52 0.062 1
(EH402783) EST0906 Schizochytrium cDNA library Schizochytriu... 52 0.062 1
(EH402028) EST0145 Schizochytrium cDNA library Schizochytriu... 52 0.062 1
(EC168658) MNE00001808 Monosiga ovata Non-normalized Monosig... 52 0.062 1
(DY889917) CeleSEQ6898 Cunninghamella elegans pBluescript (E... 52 0.062 1
(DY885743) CeleSEQ1153 Cunninghamella elegans pBluescript (E... 52 0.062 1
(DC462719) Monosiga ovata cDNA, clone: MOC-018H16, 5'end. 52 0.062 1
(BJ427178) Dictyostelium discoideum cDNA clone:ddv61f14, 5' ... 52 0.062 1
(BJ422649) Dictyostelium discoideum cDNA clone:ddv46i17, 5' ... 52 0.062 1
(BJ421378) Dictyostelium discoideum cDNA clone:ddv42m12, 5' ... 52 0.062 1
(BJ418513) Dictyostelium discoideum cDNA clone:ddv33b06, 5' ... 52 0.062 1
(BJ397858) Dictyostelium discoideum cDNA clone:dds47m22, 5' ... 52 0.062 1
(BJ393456) Dictyostelium discoideum cDNA clone:dds31k09, 5' ... 52 0.062 1
(BJ392107) Dictyostelium discoideum cDNA clone:dds26m08, 5' ... 52 0.062 1
(BJ391878) Dictyostelium discoideum cDNA clone:dds25e14, 5' ... 52 0.062 1
(BJ391606) Dictyostelium discoideum cDNA clone:dds24e14, 5' ... 52 0.062 1
(BJ366162) Dictyostelium discoideum cDNA clone:ddc38b02, 5' ... 52 0.062 1
(BJ342326) Dictyostelium discoideum cDNA clone:dda13b13, 3' ... 52 0.062 1
(BJ337704) Dictyostelium discoideum cDNA clone:dda58m12, 5' ... 52 0.062 1
(BJ334304) Dictyostelium discoideum cDNA clone:dda45i20, 5' ... 52 0.062 1
(BJ330390) Dictyostelium discoideum cDNA clone:dda31k09, 5' ... 52 0.062 1
(FE747345) CAYC4272.b1 CAYC Petrolisthes cinctipes heart, ne... 52 0.062 1
(FD820947) CBGZ21591.fwd CBGZ Volvox carteri f. nagariensis ... 52 0.062 1
(FD811356) CBGZ15607.fwd CBGZ Volvox carteri f. nagariensis ... 52 0.062 1
(FD801845) CBGX637.fwd CBGX Volvox carteri f. nagariensis in... 52 0.062 1
(EY387521) CAXA6806.fwd CAXA Helobdella robusta Subtracted L... 52 0.062 1
(EY354920) CAWZ3518.fwd CAWZ Helobdella robusta Primary Late... 52 0.062 1
(EY312746) CAWX24183.rev CAWX Helobdella robusta Primary Ear... 52 0.062 1
(AC168374) Strongylocentrotus purpuratus clone R3-4013I8, WO... 44 0.069 4
(AB102778) Dictyostelium discoideum kin5 mRNA for kinesin-re... 44 0.083 2
(AC014084) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 0.087 4
(AZ183942) SP_1002_A1_H11_SP6 Strongylocentrotus purpuratus,... 48 0.090 2
(AC188122) Trichinella spiralis chromosome UNK clone TS195-4... 40 0.11 5
(Z74796) S.cerevisiae chromosome XV reading frame ORF YOL054w. 44 0.11 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 0.11 14
(Z74797) S.cerevisiae chromosome XV reading frame ORF YOL055c. 44 0.12 2
(EU302588) Abispa ephippium mitochondrion, complete genome. 42 0.12 5
(AC178262) Strongylocentrotus purpuratus clone R3-3089F21, W... 44 0.14 6
(AC113493) Mus musculus chromosome 15, clone RP23-359H23, co... 38 0.14 2
(AC127290) Mus musculus BAC clone RP23-364F13 from chromosom... 34 0.14 2
(AC116812) Mus musculus chromosome 15, clone RP24-357G13, co... 38 0.15 2
(AC204234) Macaca mulatta clone CH250-510G17, WORKING DRAFT ... 40 0.15 2
(Z11534) D.discoideum DNA for Myb DNA-Binding domain. 44 0.18 2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 46 0.18 11
(EH754023) CNSL13234.b1_D21.ab1 CNS(LMS) yellow starthistle ... 40 0.19 2
(EH760466) CNSL6567.b1_M09.ab1 CNS(LMS) yellow starthistle C... 40 0.19 2
(EY359359) CAWZ6385.fwd CAWZ Helobdella robusta Primary Late... 36 0.19 2
(FC812126) Sr_pASP6_09m10_SP6 S. ratti mixed stage pAMP Stro... 40 0.19 2
(FC817738) Sr_pAMT7_09m10_T7 S. ratti mixed stage pAMP Stron... 40 0.19 2
(EH786076) CNSS25330.b1_D22.ab1 CNS(LMS) yellow starthistle ... 40 0.19 2
(EH754598) CNSL13765.b1_J10.ab1 CNS(LMS) yellow starthistle ... 40 0.19 2
(AK247605) Solanum lycopersicum cDNA, clone: LEFL1060CG08, H... 50 0.20 2
(AF462561) Hemibagrus nemurus clone PCTB3 microsatellite seq... 34 0.20 2
(AC168471) Strongylocentrotus purpuratus clone R3-35A16, WOR... 50 0.21 8
(AC168846) Strongylocentrotus purpuratus clone R3-13A6, WORK... 46 0.22 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 38 0.23 13
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 44 0.23 9
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 48 0.24 21
(AC118874) Rattus norvegicus clone CH230-343F12, *** SEQUENC... 48 0.25 5
(CR759920) Zebrafish DNA sequence from clone DKEY-9L20 in li... 50 0.25 1
(U22657) Mus musculus genomic locus related to cellular morp... 50 0.25 1
(CU406968) Mouse DNA sequence from clone CH29-493D13 on chro... 50 0.25 1
(CT030657) Mouse DNA sequence from clone RP23-142A12 on chro... 50 0.25 1
(AL928623) Mouse DNA sequence from clone RP23-276I21 on chro... 50 0.25 1
(AL669967) Mouse DNA sequence from clone RP23-216M21 on chro... 50 0.25 1
(AL645783) Mouse DNA sequence from clone RP23-459H16 on chro... 50 0.25 1
(AL590625) Mouse DNA sequence from clone RP23-467M8 on chrom... 50 0.25 1
(AC167815) Mus musculus BAC clone RP23-463H10 from chromosom... 50 0.25 1
(AC154234) Mus musculus BAC clone RP24-345H5 from 16, comple... 50 0.25 1
(AC153814) Mus musculus chromosome 17, clone RP23-323F20, co... 50 0.25 1
(AC149052) Mus musculus BAC clone RP24-548O1 from 7, complet... 50 0.25 1
(AC138679) Mus musculus chromosome 5, clone RP23-177I4, comp... 50 0.25 1
(AC132260) Mus musculus BAC clone RP24-370C1 from chromosome... 50 0.25 1
(AC131803) Mus musculus BAC clone RP24-549I15 from chromosom... 50 0.25 1
(AC122358) Mus musculus BAC clone RP23-406B6 from chromosome... 50 0.25 1
(AC098838) Genomic sequence for Mus musculus, clone RP23-27N... 50 0.25 1
(AC084324) Mus musculus Strain C57BL6/J chromosome 2 BAC, RP... 50 0.25 1
(AM270165) Aspergillus niger contig An08c0100, complete genome. 50 0.25 1
(AM270144) Aspergillus niger contig An07c0270, complete genome. 50 0.25 1
(AM270139) Aspergillus niger contig An07c0220, complete genome. 50 0.25 1
(CS245451) Sequence 23 from Patent WO2005119251. 50 0.25 1
(CS227536) Sequence 23 from Patent EP1602926. 50 0.25 1
(AC188655) Canis Familiaris chromosome 1, clone XX-451O16, c... 50 0.25 1
(DQ993217) Haliotis midae microsatellite HmLCS18 sequence. 50 0.25 1
(AL589863) Human DNA sequence from clone RP11-310J24 on chro... 50 0.25 1
(AF254983) Homo sapiens chromosome 21 clone RP11-589M2 map p... 50 0.25 1
(AC147793) Mus musculus chromosome 13 clone RP23-310B9 map 1... 50 0.25 1
(AC142479) Rattus norvegicus clone CH230-358P1, WORKING DRAF... 50 0.25 1
(AC140736) Rattus norvegicus clone CH230-481N12, WORKING DRA... 50 0.25 1
(AC137397) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 50 0.25 1
(AC132768) Rattus norvegicus clone CH230-93L18, WORKING DRAF... 50 0.25 1
(AC131166) Rattus norvegicus clone CH230-140M11, *** SEQUENC... 50 0.25 1
(AC130958) Rattus norvegicus clone CH230-325H18, *** SEQUENC... 50 0.25 1
(AC129853) Rattus norvegicus clone CH230-229L15, *** SEQUENC... 50 0.25 1
(AC129025) Rattus norvegicus clone CH230-48O6, *** SEQUENCIN... 50 0.25 1
(AC128909) Rattus norvegicus clone CH230-321C12, WORKING DRA... 50 0.25 1
(AC128200) Rattus norvegicus clone CH230-33A7, WORKING DRAFT... 50 0.25 1
(AC126898) Rattus norvegicus clone CH230-221C23, WORKING DRA... 50 0.25 1
(AC126882) Rattus norvegicus clone CH230-18J16, WORKING DRAF... 50 0.25 1
(AC126843) Rattus norvegicus clone CH230-9P16, *** SEQUENCIN... 50 0.25 1
(AC126294) Rattus norvegicus clone CH230-156M2, WORKING DRAF... 50 0.25 1
(AC125909) Rattus norvegicus clone CH230-100N7, WORKING DRAF... 50 0.25 1
(AC123162) Rattus norvegicus clone CH230-159A11, *** SEQUENC... 50 0.25 1
(AC120923) Rattus norvegicus clone CH230-33J11, *** SEQUENCI... 50 0.25 1
(AC119680) Rattus norvegicus clone CH230-240D18, *** SEQUENC... 50 0.25 1
(AC119098) Rattus norvegicus clone CH230-183H24, WORKING DRA... 50 0.25 1
(AC119075) Rattus norvegicus clone CH230-35B8, WORKING DRAFT... 50 0.25 1
(AC118902) Rattus norvegicus clone CH230-88B5, *** SEQUENCIN... 50 0.25 1
(AC118875) Rattus norvegicus clone CH230-496L9, *** SEQUENCI... 50 0.25 1
(AC117027) Rattus norvegicus clone CH230-152G1, *** SEQUENCI... 50 0.25 1
(AC113755) Rattus norvegicus clone CH230-193C1, *** SEQUENCI... 50 0.25 1
(AC112373) Rattus norvegicus clone CH230-242I7, *** SEQUENCI... 50 0.25 1
(AC111932) Rattus norvegicus clone CH230-154O2, WORKING DRAF... 50 0.25 1
(AC109981) Rattus norvegicus clone CH230-74L8, *** SEQUENCIN... 50 0.25 1
(AC109014) Rattus norvegicus clone CH230-16N20, *** SEQUENCI... 50 0.25 1
(AC108959) Rattus norvegicus clone CH230-85G16, *** SEQUENCI... 50 0.25 1
(AC108279) Rattus norvegicus clone CH230-35F19, WORKING DRAF... 50 0.25 1
(AC107193) Rattus norvegicus clone CH230-45L15, *** SEQUENCI... 50 0.25 1
(AC106075) Rattus norvegicus clone CH230-126N13, *** SEQUENC... 50 0.25 1
(AC103513) Rattus norvegicus clone CH230-105F18, *** SEQUENC... 50 0.25 1
(AC096993) Rattus norvegicus clone CH230-2E22, *** SEQUENCIN... 50 0.25 1
(AC096408) Rattus norvegicus clone CH230-172K18, WORKING DRA... 50 0.25 1
(AC096253) Rattus norvegicus clone CH230-88E1, *** SEQUENCIN... 50 0.25 1
(AC096049) Rattus norvegicus clone CH230-11O4, *** SEQUENCIN... 50 0.25 1
(AC095987) Rattus norvegicus clone CH230-24A1, WORKING DRAFT... 50 0.25 1
(AC095303) Rattus norvegicus clone CH230-36O20, WORKING DRAF... 50 0.25 1
(AC095284) Rattus norvegicus clone CH230-10E24, *** SEQUENCI... 50 0.25 1
(AC087152) Mus musculus clone RP23-328G13, WORKING DRAFT SEQ... 50 0.25 1
(AC087148) Mus musculus clone RP23-309D18, WORKING DRAFT SEQ... 50 0.25 1
(AC073796) Mus musculus clone RP23-431K23, WORKING DRAFT SEQ... 50 0.25 1
(CR848762) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.25 1
(AL161418) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 50 0.25 1
(AC201157) Strongylocentrotus purpuratus clone R3-14G14, WOR... 50 0.25 1
(AC184570) Strongylocentrotus purpuratus clone R3-3052J6, WO... 50 0.25 1
(AC181895) Strongylocentrotus purpuratus clone R3-1016C20, W... 50 0.25 1
(AC181181) Strongylocentrotus purpuratus clone R3-3040C10, W... 50 0.25 1
(AC181041) Strongylocentrotus purpuratus clone R3-3050E4, WO... 50 0.25 1
(AC180903) Strongylocentrotus purpuratus clone R3-3064H01, W... 50 0.25 1
(AC180737) Strongylocentrotus purpuratus clone R3-3081K24, W... 50 0.25 1
(AC179802) Strongylocentrotus purpuratus clone R3-1014G19, W... 50 0.25 1
(AC179799) Strongylocentrotus purpuratus clone R3-1014G9, WO... 50 0.25 1
(AC179424) Strongylocentrotus purpuratus clone R3-1040O3, WO... 50 0.25 1
(AC178793) Strongylocentrotus purpuratus clone R3-21O13, WOR... 50 0.25 1
(AC177063) Strongylocentrotus purpuratus clone R3-4004H10, W... 50 0.25 1
(AC176542) Strongylocentrotus purpuratus clone R3-3075O11, W... 50 0.25 1
(AC176273) Strongylocentrotus purpuratus clone R3-3060C3, WO... 50 0.25 1
(AC174177) Strongylocentrotus purpuratus clone R3-3078A16, W... 50 0.25 1
(AC010912) Homo sapiens clone RP11-7C23, *** SEQUENCING IN P... 50 0.25 1
(FI052652) CHO_OF6515xj20f1.ab1 CHO_OF6 Nicotiana tabacum ge... 50 0.25 1
(FI013321) CHO_OF6914xb16r1.ab1 CHO_OF6 Nicotiana tabacum ge... 50 0.25 1
(FH125299) CHO_OF3315xf07f1.ab1 CHO_OF3 Nicotiana tabacum ge... 50 0.25 1
(ET092878) QM0AAA18DH05FM1 CCL1 Citrus clementina genomic cl... 50 0.25 1
(EK134152) 1093011493237 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.25 1
(EK118830) 1092963305170 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.25 1
(EF763004) Mus musculus C57BL/6N IST10673H5BBF1 gene trap em... 50 0.25 1
(DH807471) Rattus norvegicus DNA, BAC clone: RNB1-405F15, 3'... 50 0.25 1
(DH489849) Monosiga ovata DNA, fosmid clone: MOF-049G18, gen... 50 0.25 1
(DH398481) Oryzias latipes Fosmid clone:GOLWFno798_i20, forw... 50 0.25 1
(DE910228) Macropus eugenii DNA, BAC clone: MEB1-093G15_F, 5... 50 0.25 1
(DE238116) Trifolium pratense DNA, clone:RCG34554. 50 0.25 1
(DE237802) Trifolium pratense DNA, clone:RCG33881. 50 0.25 1
(DE226514) Trifolium pratense DNA, clone:RCG18969. 50 0.25 1
(CE071636) tigr-gss-dog-17000323089108 Dog Library Canis lup... 50 0.25 1
(EG616805) REPROTRACTF088212J6 POSSUM_01-POSSUM-C-REPROTRACT... 50 0.25 1
(DV604649) EST1207645 Glossina morsitans morsitans Fat body ... 50 0.25 1
(DC493279) Monosiga ovata cDNA, clone: MOC-062L10, 5'end. 50 0.25 1
(BG763570) 602735973F1 NIH_MGC_49 Homo sapiens cDNA clone IM... 50 0.25 1
(GE516834) CCFU2034.g1_D05.ab1 CCF(STU) sunflower Helianthus... 50 0.25 1
(GE500176) CCFT2115.g1_E02.ab1 CCF(STU) sunflower Helianthus... 50 0.25 1
(FM010745) Dicentrarchus labrax EST, clone cDN26P0006M17, 5'... 50 0.25 1
(FG202423) AGN_PNL232dr1_a4.trimmed.seq AGN_PNL Nicotiana ta... 50 0.25 1
(FE798081) CCAG21821.g1 CCAG Petrolisthes cinctipes heart, g... 50 0.25 1
(FE798080) CCAG21821.b1 CCAG Petrolisthes cinctipes heart, g... 50 0.25 1
(FE749859) CAYC657.g1 CAYC Petrolisthes cinctipes heart, ner... 50 0.25 1
(FE742709) CAYC1041.g1 CAYC Petrolisthes cinctipes heart, ne... 50 0.25 1
(FE742708) CAYC1041.b1 CAYC Petrolisthes cinctipes heart, ne... 50 0.25 1
(EY489532) CBBP17093.rev CBBP Hirudo medicinalis hermaphrodi... 50 0.25 1
(EY364740) CAWZ9700.fwd CAWZ Helobdella robusta Primary Late... 50 0.25 1
(EY357797) CAWZ5442.fwd CAWZ Helobdella robusta Primary Late... 50 0.25 1
(EY316330) CAWX26559.fwd CAWX Helobdella robusta Primary Ear... 50 0.25 1
(EY308775) CAWX21216.fwd CAWX Helobdella robusta Primary Ear... 50 0.25 1
(EY299635) CAWX14575.rev CAWX Helobdella robusta Primary Ear... 50 0.25 1
(EY253039) CATY8975.fwd CATY Aspergillus niger fungal filame... 50 0.25 1
(EY128264) CBTH1449.g1_B04.ab1:P Triphysaria pusilla root ti... 50 0.25 1
(EY128263) CBTH1449.b1_B04.ab1:P Triphysaria pusilla root ti... 50 0.25 1
(EY126888) CBTH1150.b1_L24.ab1:P Triphysaria pusilla root ti... 50 0.25 1
(EX517650) Hops-CTAB-17R_2007-06-15/Hops-CTAB-17R_C12_046_1 ... 50 0.25 1
(DJ025883) Genome-wide DNA marker of Saccharomyces cerevisiae. 44 0.26 12
(AC135566) Medicago truncatula clone mth2-22g8, WORKING DRAF... 38 0.26 7
(AC179228) Strongylocentrotus purpuratus clone R3-1106O16, W... 42 0.26 6
(EX163682) LY_YIT_DP1804 Dermatophagoides pteronyssinus cDNA... 46 0.27 2
(AC157829) Strongylocentrotus purpuratus clone R3-13A6, WORK... 46 0.28 5
(CR222304) Reverse strand read from insert in 5'HPRT inserti... 46 0.28 2
(DN300276) PL04018B2C07 cDNA from sexually mature hermaphodi... 42 0.29 2
(DN307498) PL05014A1F03 cDNA from sexually mature hermaphodi... 42 0.30 2
(AC007772) Drosophila melanogaster clone BACR19P12, complete... 44 0.32 6
(EI224059) OR__Ba0017E17.f OR__Ba Oryza rufipogon genomic cl... 46 0.33 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 38 0.34 9
(DH467001) Monosiga ovata DNA, fosmid clone: MOF-009I11, gen... 48 0.36 2
(DT754037) EST1187886 Aquilegia cDNA library Aquilegia formo... 48 0.38 2
(EY311717) CAWX23619.fwd CAWX Helobdella robusta Primary Ear... 38 0.38 2
(EK131125) 1093009588479 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.39 2
(FG704016) G1144P37RM11.T0 Anolis carolinensis pooled normal... 38 0.40 2
(AC168730) Strongylocentrotus purpuratus clone R3-3010K13, W... 44 0.41 3
(AC180271) Strongylocentrotus purpuratus clone R3-3123M09, W... 42 0.42 5
(AC178115) Strongylocentrotus purpuratus clone R3-3073N20, W... 44 0.42 3
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 34 0.44 14
(AC131495) Lytechinus variegatus clone Lv31L12, *** SEQUENCI... 40 0.44 7
(AC212852) Populus trichocarpa clone POP106-O02, complete se... 44 0.46 5
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 32 0.50 14
(CA378313) 657102 NCCCWA 1RT Oncorhynchus mykiss cDNA clone ... 44 0.51 2
(AC118453) Rattus norvegicus clone CH230-217C17, *** SEQUENC... 34 0.53 2
(AC113626) Rattus norvegicus clone CH230-32A10, WORKING DRAF... 34 0.53 2
(AC097094) Rattus norvegicus clone CH230-207L23, WORKING DRA... 34 0.53 2
(AC173562) Strongylocentrotus purpuratus clone R3-1040C11, W... 36 0.54 2
(AC179379) Strongylocentrotus purpuratus clone R3-1101M12, W... 40 0.56 4
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 38 0.57 9
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 42 0.57 8
(EY498933) CBBP4409.rev CBBP Hirudo medicinalis hermaphrodit... 40 0.59 3
(X91067) S.cerevisiae DNA from chromosome XV (contains gpd3,... 44 0.60 2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.60 15
(DR696819) Lr_CHECF_86B07_M13R Earthworm Head Enriched libra... 44 0.61 2
(AC128437) Rattus norvegicus clone CH230-206K10, *** SEQUENC... 42 0.61 7
(AC178201) Strongylocentrotus purpuratus clone R3-3085A15, W... 48 0.61 5
(GE468078) ptcesa0_0001_D08 swimming crab eyestalk Library P... 44 0.65 2
(AP010328) Lotus japonicus genomic DNA, chromosome 3, clone:... 38 0.68 9
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 34 0.71 24
(AR557126) Sequence 12257 from patent US 6747137. 38 0.73 2
(EB396221) PMAO-aaa86g06.g1 Lamprey_EST_Embryo Petromyzon ma... 40 0.79 2
(AC176956) Strongylocentrotus purpuratus clone R3-34H01, WOR... 42 0.82 5
(AC149940) Strongylocentrotus purpuratus clone R3-15I1, WORK... 42 0.82 5
(AC094155) Rattus norvegicus clone CH230-2M19, WORKING DRAFT... 46 0.83 6
(AC207884) Zea mays chromosome 3 clone CH201-90I6; ZMMBBc009... 44 0.83 5
(AL773549) Mouse DNA sequence from clone RP23-183A1 on chrom... 46 0.87 5
(AC178918) Strongylocentrotus purpuratus clone R3-3115F1, WO... 48 0.90 5
(AC179778) Strongylocentrotus purpuratus clone R3-1015N15, W... 48 0.92 8
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 36 0.96 11
(AC200930) Strongylocentrotus purpuratus clone R3-1021N1, WO... 44 0.97 5
(CU861474) Zebrafish DNA sequence from clone CH73-129N15 in ... 48 0.97 1
(CU694321) Zebrafish DNA sequence from clone ZFOS-2733E12 in... 48 0.97 1
(CU638698) Zebrafish DNA sequence from clone CH1073-202I11 i... 48 0.97 1
(CR925795) Zebrafish DNA sequence from clone DKEY-25C9 in li... 48 0.97 1
(CR751563) Zebrafish DNA sequence from clone CH211-203C10 in... 48 0.97 1
(CR391931) Zebrafish DNA sequence from clone DKEY-267P8 in l... 48 0.97 1
(CR388001) Zebrafish DNA sequence from clone CH211-279I17 in... 48 0.97 1
(CR376850) Zebrafish DNA sequence from clone DKEY-246K9 in l... 48 0.97 1
(CR376754) Zebrafish DNA sequence from clone CH211-254O14 in... 48 0.97 1
(CR354444) Zebrafish DNA sequence from clone DKEY-158N23 in ... 48 0.97 1
(BX511223) Zebrafish DNA sequence from clone DKEYP-96B6 in l... 48 0.97 1
(BX323881) Zebrafish DNA sequence from clone CH211-274G13 in... 48 0.97 1
(AL935329) Zebrafish DNA sequence from clone CH211-253P2 in ... 48 0.97 1
(AL935296) Zebrafish DNA sequence from clone CH211-281F5. 48 0.97 1
(AL772144) Zebrafish DNA sequence from clone CH211-164J3 in ... 48 0.97 1
(BV002934) S209P6388RE4.T0 C3H/HeJ Mus musculus STS genomic,... 48 0.97 1
(X65491) M.musculus ICAM-2 gene for intercellular adhesion m... 48 0.97 1
(CT033785) Mouse DNA sequence from clone RP23-445G17 on chro... 48 0.97 1
(CT010451) Mouse DNA sequence from clone RP23-103I7 on chrom... 48 0.97 1
(CT009539) Mouse DNA sequence from clone RP23-10G6 on chromo... 48 0.97 1
(CR954965) Mouse DNA sequence from clone RP23-19H11 on chrom... 48 0.97 1
(AL844604) Mouse DNA sequence from clone RP24-318C20 on chro... 48 0.97 1
(AL833806) Mouse DNA sequence from clone RP23-425H11 on chro... 48 0.97 1
(AL773520) Mouse DNA sequence from clone RP23-350F23 on chro... 48 0.97 1
(AL772235) Mouse DNA sequence from clone RP23-155K12 on chro... 48 0.97 1
(AL732540) Mouse DNA sequence from clone RP23-170L19 on chro... 48 0.97 1
(AL691470) Mouse DNA sequence from clone RP23-160F12 on chro... 48 0.97 1
(AL670865) Mouse DNA sequence from clone RP23-395J4 on chrom... 48 0.97 1
(AL670675) Mouse DNA sequence from clone RP23-263N18 on chro... 48 0.97 1
(AL604045) Mouse DNA sequence from clone RP23-418O11 on chro... 48 0.97 1
(AL589902) Mouse DNA sequence from clone RP23-108D12 on chro... 48 0.97 1
(AF287263) Mus musculus ATP-binding cassette 1, sub-family A... 48 0.97 1
(AC166343) Mus musculus BAC clone RP23-470N9 from chromosome... 48 0.97 1
(AC166328) Mus musculus BAC clone RP23-31H5 from chromosome ... 48 0.97 1
(AC159987) Mus musculus 10 BAC RP23-475N14 (Roswell Park Can... 48 0.97 1
(AC159630) Mus musculus BAC clone RP24-173F2 from chromosome... 48 0.97 1
(AC159280) Mus musculus BAC clone RP23-347A2 from chromosome... 48 0.97 1
(AC158950) Mus musculus chromosome 1, clone RP24-215K13, com... 48 0.97 1
(AC158519) Mus musculus BAC clone RP24-87O4 from chromosome ... 48 0.97 1
(AC156271) Mus musculus 10 BAC RP24-317L8 (Roswell Park Canc... 48 0.97 1
(AC155265) Mus musculus BAC clone RP23-253O24 from chromosom... 48 0.97 1
(AC154471) Mus musculus BAC clone RP23-195D3 from chromosome... 48 0.97 1
(AC154452) Mus musculus BAC clone RP24-172H10 from 14, compl... 48 0.97 1
(AC152946) Mus musculus 10 BAC RP23-40N7 (Roswell Park Cance... 48 0.97 1
(AC147108) Mus musculus BAC clone RP24-70D19 from 13, comple... 48 0.97 1
(AC142099) Mus musculus BAC clone RP24-350H4 from 6, complet... 48 0.97 1
(AC139043) Mus musculus chromosome 3, clone RP23-321I11, com... 48 0.97 1
(AC134849) Mus musculus BAC clone RP24-207G4 from 9, complet... 48 0.97 1
(AC132459) Mus musculus BAC clone RP23-152I2 from chromosome... 48 0.97 1
(AC129602) Mus musculus BAC clone RP23-37L24 from 16, comple... 48 0.97 1
(AC124978) Mus musculus chromosome 5, clone RP24-107D19, com... 48 0.97 1
(AC123034) Mus musculus BAC clone RP24-484E17 from chromosom... 48 0.97 1
(AC121296) Mus musculus chromosome 14, clone RP23-286K8, com... 48 0.97 1
(AC120002) Mus musculus chromosome 12, clone RP24-147D14, co... 48 0.97 1
(AC116507) Mus musculus chromosome 19, clone RP24-309C17, co... 48 0.97 1
(AC116106) Mus musculus chromosome 16, clone RP23-23D5, comp... 48 0.97 1
(AC109169) Mus musculus chromosome 6, clone RP23-5D6, comple... 48 0.97 1
(AC107741) Mus musculus chromosome 3, clone RP23-335P23, com... 48 0.97 1
(AC107703) Mus musculus, clone RP23-472H1, complete sequence. 48 0.97 1
(AC103636) Mus musculus chromosome 5, clone RP24-373A18, com... 48 0.97 1
(AC102766) Mus musculus chromosome 5, clone RP23-20L22, comp... 48 0.97 1
(AC102166) Mus musculus chromosome 1, clone RP23-447B15, com... 48 0.97 1
(AC102099) Mus musculus chromosome 5, clone RP23-52A2, compl... 48 0.97 1
(BS000139) Pan troglodytes chromosome 22 clone:LA-PCR-3, map... 48 0.97 1
(AC194993) Pan troglodytes BAC clone CH251-289J24 from chrom... 48 0.97 1
(AC192120) Pan troglodytes BAC clone CH251-683F10 from chrom... 48 0.97 1
(AC187497) Rhesus macaque BAC clone CH250-65H12 from chromos... 48 0.97 1
(Y13975) Candida albicans PLC1 gene. 48 0.97 1
(EU094824) Humulus lupulus clone ACC3-C8-6 microsatellite se... 48 0.97 1
(CU638743) Podospora anserina genomic DNA chromosome 3, supe... 48 0.97 1
(AY022620) Oryza sativa microsatellite MRG4945 containing (C... 48 0.97 1
(AP008216) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.97 1
(AP008214) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.97 1
(AP008213) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.97 1
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.97 1
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 48 0.97 1
(AP007175) Aspergillus oryzae RIB40 genomic DNA, SC010. 48 0.97 1
(AP006502) Cyanidioschyzon merolae DNA, chromosome 20, compl... 48 0.97 1
(AP006500) Cyanidioschyzon merolae DNA, chromosome 18, compl... 48 0.97 1
(AP006497) Cyanidioschyzon merolae DNA, chromosome 15, compl... 48 0.97 1

>(BJ348219) Dictyostelium discoideum cDNA clone:dda32e17, 3' end,
single read.
Length = 793

Score = 779 bits (393), Expect(4) = 0.0
Identities = 393/393 (100%)
Strand = Plus / Minus


Query: 650 agagaaaagattacatatatttaatattagagtaccagttgcagatacaccaattgaagt 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 agagaaaagattacatatatttaatattagagtaccagttgcagatacaccaattgaagt 734


Query: 710 atttaattcaattgatttagagacaaccatttcattacttacaaataagataataagaga 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 atttaattcaattgatttagagacaaccatttcattacttacaaataagataataagaga 674


Query: 770 aactttagaaaaaggtatttcagaggcaagaatttcactagttgattggttaaagaatat 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aactttagaaaaaggtatttcagaggcaagaatttcactagttgattggttaaagaatat 614


Query: 830 cattacaaaatataacgaaaacgttgtaatattgtcatcggtaacttcatctattgatgt 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cattacaaaatataacgaaaacgttgtaatattgtcatcggtaacttcatctattgatgt 554


Query: 890 aaacttttcacaagtctctcatttaagaccattaccaagatacgtatttgcattgatgaa 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aaacttttcacaagtctctcatttaagaccattaccaagatacgtatttgcattgatgaa 494


Query: 950 atcaccaatacttagggaactaacaaccgatattgaagcatcaaccataaagaagaaatc 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atcaccaatacttagggaactaacaaccgatattgaagcatcaaccataaagaagaaatc 434


Query: 1010 tgatgaatggatttatcatcaatgtttatattc 1042
|||||||||||||||||||||||||||||||||
Sbjct: 433 tgatgaatggatttatcatcaatgtttatattc 401

Score = 553 bits (279), Expect(4) = 0.0
Identities = 279/279 (100%)
Strand = Plus / Minus


Query: 1043 caacactagagccacgtttattacatcgttcaatctatccagtattgtatagttatggtg 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caacactagagccacgtttattacatcgttcaatctatccagtattgtatagttatggtg 342


Query: 1103 caccaaataatttagcttcaaaatatttaccattatctcaaaatacaatactcacaagta 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 caccaaataatttagcttcaaaatatttaccattatctcaaaatacaatactcacaagta 282


Query: 1163 catctcatatctatttagttgatagttttgatcaacttgtggttttctataatcttcaag 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 catctcatatctatttagttgatagttttgatcaacttgtggttttctataatcttcaag 222


Query: 1223 aggtttcttcacatcatcaattcccaccaccacctgaaagtttaattcgtcaaaccattt 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aggtttcttcacatcatcaattcccaccaccacctgaaagtttaattcgtcaaaccattt 162


Query: 1283 caaatagtaaacaagatcgtttaattgtaccagaaattc 1321
|||||||||||||||||||||||||||||||||||||||
Sbjct: 161 caaatagtaaacaagatcgtttaattgtaccagaaattc 123

Score = 123 bits (62), Expect(4) = 0.0
Identities = 62/62 (100%)
Strand = Plus / Minus


Query: 1382 gaagaaaataatgctggtccatcattttataatttcttaagagatatttcttcaaatgtt 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gaagaaaataatgctggtccatcattttataatttcttaagagatatttcttcaaatgtt 5


Query: 1442 aa 1443
||
Sbjct: 4 aa 3

Score = 117 bits (59), Expect(4) = 0.0
Identities = 59/59 (100%)
Strand = Plus / Minus


Query: 1322 caatatcttaaaggtaaattaattgaaaatccaattgaattcactaaatttttaattga 1380
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caatatcttaaaggtaaattaattgaaaatccaattgaattcactaaatttttaattga 65

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,799,019,951
Number of extensions: 114946831
Number of successful extensions: 10852941
Number of sequences better than 10.0: 1797
Length of query: 1516
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1492
Effective length of database: 96,409,374,237
Effective search space: 143842786361604
Effective search space used: 143842786361604
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15697-1 (Contig-U15697-1Q) /CSM_Contig/Contig-U15697-1Q.Seq.d
(1516 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC006232_14(AC006232|pid:none) Arabidopsis thaliana chromosome 2... 86 4e-31
BT069063_1(BT069063|pid:none) Zea mays full-length cDNA clone ZM... 80 1e-28
BT063957_1(BT063957|pid:none) Zea mays full-length cDNA clone ZM... 78 1e-28
AM483425_6(AM483425|pid:none) Vitis vinifera contig VV78X141212.... 89 3e-25
CR855194_5(CR855194|pid:none) Oryza sativa genomic DNA, chromoso... 65 9e-21
AL662945_4(AL662945|pid:none) Oryza sativa genomic DNA, chromoso... 65 9e-21
(Q9USS7) RecName: Full=Uncharacterized protein C4.03c; &AL12186... 54 2e-05
AM910993_97(AM910993|pid:none) Plasmodium knowlesi strain H chro... 48 8e-04
(O95487) RecName: Full=Protein transport protein Sec24B; AltName... 48 0.001
AK304234_1(AK304234|pid:none) Homo sapiens cDNA FLJ54322 complet... 48 0.001
BT034740_1(BT034740|pid:none) Zea mays full-length cDNA clone ZM... 48 0.001
AK304060_1(AK304060|pid:none) Homo sapiens cDNA FLJ61651 complet... 47 0.001
(O95486) RecName: Full=Protein transport protein Sec24A; AltName... 47 0.001
AJ131244_1(AJ131244|pid:none) Homo sapiens mRNA for Sec24 protei... 47 0.001
(A6QNT8) RecName: Full=Protein transport protein Sec24A; AltName... 47 0.002
CR382131_577(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 46 0.003
AL645602_14(AL645602|pid:none) Mouse DNA sequence from clone RP2... 46 0.003
AK029139_1(AK029139|pid:none) Mus musculus 10 days neonate skin ... 46 0.003
BT060462_1(BT060462|pid:none) Zea mays full-length cDNA clone ZM... 46 0.003
CP001574_315(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 45 0.005
(Q876F4) RecName: Full=Protein transport protein SEC24-1; &AY14... 45 0.009
(Q4P9K4) RecName: Full=Protein transport protein SEC24; 44 0.012
FN357311_36(FN357311|pid:none) Schistosoma mansoni genome sequen... 44 0.016
(P53953) RecName: Full=SED5-binding protein 2; AltName: Full=SEC... 44 0.016
BT070805_1(BT070805|pid:none) Picea sitchensis clone WS02750_N05... 44 0.020
CP001141_71(CP001141|pid:none) Phaeodactylum tricornutum CCAP 10... 43 0.027
(Q6C2T4) RecName: Full=Protein transport protein SEC24; &CR3821... 43 0.027
H88859(H88859)protein ZC518.2 [imported] - Caenorhabditis elegans 43 0.035
(A4QUL1) RecName: Full=Protein transport protein SEC24; 43 0.035
(Q1E6U9) RecName: Full=Protein transport protein SEC24; 42 0.046
AC159411_38(AC159411|pid:none) Trypanosoma brucei chromosome 3 c... 42 0.059
AE013599_979(AE013599|pid:none) Drosophila melanogaster chromoso... 42 0.059
(Q54U61) RecName: Full=Protein transport protein SEC24; 42 0.077
CP000588_180(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.077
AC012395_23(AC012395|pid:none) Arabidopsis thaliana chromosome I... 41 0.10
(Q875V8) RecName: Full=Protein transport protein SEC24-1; &AY14... 41 0.13
(Q876F5) RecName: Full=Protein transport protein SEC24-2; &AY14... 40 0.23
(Q4WLP1) RecName: Full=Protein transport protein sec24; 40 0.23
FN357311_35(FN357311|pid:none) Schistosoma mansoni genome sequen... 40 0.23
(P40482) RecName: Full=Protein transport protein SEC24; AltName:... 40 0.23
(Q875Q0) RecName: Full=Protein transport protein SEC24; Flags: F... 40 0.30
(A2QSG6) RecName: Full=Protein transport protein sec24; &AM2701... 39 0.39
CU607053_35(CU607053|pid:none) Podospora anserina genomic DNA ch... 39 0.39
(Q86ZK8) RecName: Full=Protein transport protein SEC24; &BX0887... 39 0.39
(Q2ULI0) RecName: Full=Protein transport protein sec24; &AP0071... 39 0.39
(A1CUC3) RecName: Full=Protein transport protein sec24; 39 0.39
(Q5AQ76) RecName: Full=Protein transport protein SEC24; 39 0.50
BC057355_1(BC057355|pid:none) Mus musculus Sec24 related gene fa... 39 0.66
AK152339_1(AK152339|pid:none) Mus musculus bone marrow macrophag... 39 0.66
CR954208_189(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 38 0.86
CU928171_406(CU928171|pid:none) Kluyveromyces thermotolerans str... 38 0.86
CR855030_5(CR855030|pid:none) Oryza sativa genomic DNA, chromoso... 38 1.1
AL662964_17(AL662964|pid:none) Oryza sativa genomic DNA, chromos... 38 1.1
(Q0PVD8) RecName: Full=Protein transport protein SEC24; &DQ6832... 38 1.1
(Q2HH63) RecName: Full=Protein transport protein SEC24; 37 1.5
(Q5KMW6) RecName: Full=Protein transport protein SEC24; &AE0173... 37 1.5
AE017342_26(AE017342|pid:none) Cryptococcus neoformans var. neof... 37 1.5
(Q6BT80) RecName: Full=Protein transport protein SEC24; &CR3821... 37 1.9
CP000080_22(CP000080|pid:none) Leishmania major strain Friedlin ... 36 4.3
FN357467_12(FN357467|pid:none) Schistosoma mansoni genome sequen... 36 4.3
AM502247_38(AM502247|pid:none) Leishmania infantum chromosome 29. 36 4.3
FM992690_200(FM992690|pid:none) Candida dubliniensis CD36 chromo... 35 5.6
AL590442_121(AL590442|pid:none) chromosome II of strain GB-M1 of... 35 5.6
(Q875V7) RecName: Full=Protein transport protein SEC24-2; &AY14... 35 5.6
X94547_1(X94547|pid:none) S.cerevisiae 12.8 kb DNA from left arm... 35 7.3
(Q6FWD3) RecName: Full=Protein transport protein SEC24-2; &CR38... 35 7.3
DQ683201_1(DQ683201|pid:none) Pichia pastoris Sec23 gene, genomi... 35 7.3
AB019376_1(AB019376|pid:none) Irpex lacteus cel2 gene for exocel... 35 9.5
(Q6CLE0) RecName: Full=Protein transport protein SEC24; &CR3821... 35 9.5

>AC006232_14(AC006232|pid:none) Arabidopsis thaliana chromosome 2
clone F10A12 map B68, complete sequence.
&AY054495_1(AY054495|pid:none) &B84673(B84673)
&BT010339_1(BT010339|pid:none)
Length = 745

Score = 85.9 bits (211), Expect(2) = 4e-31
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Frame = +3

Query: 651 EKRLHIFNIRVPVADTPIEVFNSIDLETTISLLTNKIIRETLEKGISEARISLVDWLKNI 830
++RL I ++ A E+++S+D E +SLL +K+I +LE G+ E R L DWL +
Sbjct: 475 QRRLRIRTMQFGTAHNINEIYDSVDHEVVLSLLVHKVILASLEDGVREGRALLHDWLVIL 534

Query: 831 ITKYNENVVIL------SSVTSSIDVNFSQVSHLRPLPRYVFALMKSPILRELTTDIEAS 992
+YN+ ++ S++S ID+ FSQ L PLPR VFAL+++P+LR +
Sbjct: 535 TAQYNDAFNLVQYKNGNKSMSSQIDITFSQCPQLEPLPRLVFALLRNPLLRFHEEGVH-- 592

Query: 993 TIKKKSDEWIYHQCLYS 1043
D IY QCL+S
Sbjct: 593 -----PDYRIYLQCLFS 604

Score = 73.9 bits (180), Expect(2) = 4e-31
Identities = 38/91 (41%), Positives = 55/91 (60%)
Frame = +1

Query: 1048 LEPRLLHRSIYPVLYSYGAPNNLASKYLPLSQNTILTSTSHIYLVDSFDQLVVFYNLQEV 1227
L+P LH IYP L SY P+ LA LS+ ++TS S I+ +D++ L+VFY+
Sbjct: 606 LDPSSLHCGIYPALMSYSTPDTLAYPRHSLSRAALITSGSPIFFLDAYTTLIVFYS-STA 664

Query: 1228 SSHHQFPPPPESLIRQTISNSKQDRLIVPEI 1320
FPPP + L+RQTI+ KQ+R I P++
Sbjct: 665 DPSIPFPPPQDCLLRQTINKVKQERSITPKL 695

Score = 52.4 bits (124), Expect = 4e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +2

Query: 56 MNVRFSSQRFPVNLEVKEGSGSIFGCVIQPF----KNNF--RYQENSKNIGRCKKCFAYI 217
M VR + RFP++ + +E SG +G + PF +N N + RC+ C+AY
Sbjct: 1 MAVRATVSRFPIDSDAQEASGLPWGLTVTPFAAKDENGIGPACGSNGHLLPRCENCYAYF 60

Query: 218 NNLVKFERGGWRCNICESLN 277
N + ++ W C++C +LN
Sbjct: 61 NTYCELDQWAWNCSLCGTLN 80

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,949,250,289
Number of extensions: 35764166
Number of successful extensions: 103581
Number of sequences better than 10.0: 69
Number of HSP's gapped: 103485
Number of HSP's successfully gapped: 103
Length of query: 505
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 372
Effective length of database: 620,718,517
Effective search space: 230907288324
Effective search space used: 230907288324
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.70 gvh: 0.30 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.31 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: plasma membrane
4.0 %: peroxisomal

>> prediction for Contig-U15697-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0