Contig-U15690-1
Contig ID Contig-U15690-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15690-1 (Contig-U15690-1Q) /CSM_Contig/Contig-U15690-1Q.Seq.d
TGGCCTACTGGAAAAATTTATTTTTTATTTTTTTTTTATGTTGTAGTTAA
TAATTTATTTATTTATTTATTTCTCTATTTATTTGTATTTATTTTTTTAA
AAAAAATTTAAAAAATTTTTTAATGTATAATAATAATTAAAAAAAAAAAA
AAAAAAAATTTTAACCCCATTTAAAAAAAAAAAAAAAATTTTNCAATTTT
GGGGTTTAAAAAAAAAA----------ACTGTTGGCCTACTGGCTTTTTT
ATTTTTTTTATATTTTCTCTTTTTAATAATTAATTTTATTTTAATATAAA
ACTCATAATTTTATATATAAAATAAAAAAATAAAATAAAAATGAACAAAG
AAGAATATTCAGATATTTCAGACTCTGAATCAGAGGAAGTTCATGAAACA
AACAATCATAATGAACACGAACACGAAGAAGAAGATGACACACCAGAAAT
TGTTGTACCAGAACGTAAATTCTTAAAAGAAGATGAAGATTATTCAGTTC
CATTCCCAGTCATGCGTGAATGTTTGGTCCTTTTGTTGCAATCAAGAAGA
ATCTTAAGAGATATGATGTATTATAGATTCAAAATGGATAGATTCCTTTC
TGGTAATCTCTCTGTATTTGAAATTCAAAATCTATTACATTCACAAAGAG
AAGATAAAGAATCTGATTGGATTGCTGAAATTCAAGAATTAAAACGTAAT
TTAGTTAGTGAAGTTAGAAGAAATCATACATTAGAAAGAGATCTTAATCG
TCTTGATAAGAGAATTGCACTTTTAATTAAAAATCGTGGTAATATTCAAG
ATGTATTAGCAGACAAAGCTGGTCTTAAAGCACCAAAACATAAGGGAGAT
CAAAAGAAACCAGAGCTTATTAATGATCCAAAGAAATTAGAAGCCTATCA
AAATCTCTTTTACTTACTTCAAACAGAACCAAAATATTTGGCAGGTTTGG
TTTATTTGATTCAACCAGAGCAAATGGAGTCCTTCTTGGGTACCGTCATC
TTGACATTGTTTGGTGATGCATTCACACCAAGAGAAGAGTTTCTCTTACT
CTCTCTCTATAGACTTTCAATTCAAAAGGNGATGGCAAACATTGCAACCG
TTGGTGATTTCCTCAAGGCTGACACTGTCGTTCCAAAGATGATTATCACC
TACAACAAACGTAAACAAGGTACCGACTATTTGAAGGCTGTCATTGGTCC
AATCTTGTCTAATGTCATCAAACAAGAGTTGAATCTCGAGTTGAAACCAA
ATTTAGTCTATGCTGCCATCATCTCTGAACAAGAGATTAGAACCGGTGAA
AAGAGTACACTCGATAGAAATGTCTCACATGAGAAAGCTTTAGAAGTTCC
AGAGGTTACCAAAACTATCAAGGCTCGTGTCGATCAATTGATCTCCATTT
GTGAACAATTCCTCGATGGTATCATTAGTTCATTGAATCGTCTTCCATAT
GGTATTCGTTGGATTTGTAAACAAATCTATCAAATCGCTGAAAAGAATTT
CACCAAATCAACTCAAGATGAAATTCTCAAGGTCATTGGTTACTTTATTT
ACTATCGTTTCATTCAAGTTGCCATGGTCTCTCCAGAGGAATATGATTTG
GTCGGTCGTGAAATTCATCCAACCGCCCGTAAGAATTTAATCAATGTATC
AAAAGTATTACAAGCACTTTTCAATTTTGCTCAATTTGGTTCCTCTGAAA
AACACTTTATTCCTTTGAATGGTTGGATCACCTCTCATATGGGTGACATT
AAAAATTATCTCCAAGAGATCATTGAAGTCGGTGAACCAGAAGATTATCT
CCAAGTTGATAAATATATGGAACTCACTCAAAAAACTAAACCAGTCATTA
TCATCTCCCTTCCAGAGATTTGTAATACTCATCAACTCATCTCAAAGAAT
TTAGATTCACTCGTTGCCAAAGGTGAAAAGGATGATCCAATGAGAATCAT
TATGAAGGAACTCGATGAATTTGGTCCACCACCAGATATTGCTGCCGATG
ATGATCGTGAAGTTCAATTGACTCTTTCCAATAAATTCCAAAAAACCATT
GAAGAGGAATTATCACCAGGTGAAAGTCTTCTCTCTCAAACCAAAGAGAT
GGTCATCTCTTTACTTCGTGCTCTTCCAACTCTTCCAGAACAAAAAGACC
AATCTGATGAACCACCCCAATCTTGTCGATGTTTTAAACAAGGCTCGTCA
AGCTGATCCATCTTTGGAGCCAGAAATCAAAAAGATCCTTGATAACCTCA
AAAAACTTGAAGAATATAATCTCACCACCTCTGCCGATAATTATTCCTCT
TTCCTCAAGGCAGTCGCACTCGAAGTAGTTAATCGTGCTGAAATTCGTGA
ACAACAAAAGAAGGAGAAACAAAGATTAACCACCTCTTTGAATAATCTTC
GTAAACATCAAAAATATCTCAACGAACAAATCGCTCAATACAATCAATAC
CTCCAAGATTGTCGTCTCAAACATTATCAAAACAAGAGCAAAAAGAAGAA
GAAGGGAGATGGTGCCAAAGTTGGTCCTTTCAAATTCAGTTTCAGCGAAC
TTCACAAGAAAGGTGTCATCGTCGACTCTGAAGTTCCTCAAATCACCAGA
AAGAAGATTAAATTTGTCATTAGCTCTGATACCGTTGGTGTGTTTGATGT
CTCTGCTAAAATGGCTGGTATCGATGTTCAAACTATGCGTTTGGAACTTG
ATGACCTTTTAGAACTCAATTCAATTGGCACCACAACTTTAGAATTAGAT
CAAATCACTTTAGATGTTAATATGACCATACATTTATTAAACAAACTTTT
CTTATATTAGTCAACTTAATAAATAAAAAATAAATAAAAAAATATTGTTG
TATTAAAGAATAAAAAAAAAAAAAAAAAAAAA

Gap gap included
Contig length 2872
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 496308
End point 499167
Strand (PLUS/MINUS) PLUS
Number of clones 135
Number of EST 205
Link to clone list U15690
List of clone(s)

est1=AHL747F,1,185
est2=AHB228F,9,185
est3=AHA387F,13,217
est4=SHL213F,13,183
est5=AHH288F,16,185
est6=AHK138F,17,185
est7=AHN580F,20,185
est8=SHJ423F,20,183
est9=SHE603F,21,183
est10=SHE892F,21,183
est11=AHL881F,24,185
est12=SHE715F,27,183
est13=SHK352F,30,183
est14=AHA310F,38,217
est15=AHE639F,38,217
est16=AHH312F,38,185
est17=AHN283F,38,185
est18=AHQ686F,38,185
est19=CFI666F,38,183
est20=CHH486F,38,183
est21=SHD883F,38,217
est22=VHE881F,43,182
est23=CHF696F,45,217
est24=AHK611F,51,185
est25=SHH462F,53,217
est26=AHP413F,57,185
est27=AHA626F,60,217
est28=VHL189F,60,182
est29=AHN228F,65,217
est30=SHI207F,79,217
est31=CHK187F,81,183
est32=SHC461F,89,217
est33=SHB795F,218,837
est34=CHH333F,225,848
est35=CHH143F,233,816
est36=CHI475F,233,843
est37=CHJ737F,233,835
est38=SHE521F,233,847
est39=VHA255F,233,848
est40=CHN271F,250,821
est41=SHD326F,250,850
est42=SHD756F,250,850
est43=CHP248F,252,846
est44=SHB644F,255,872
est45=CHR303F,260,847
est46=SHK407F,260,845
est47=SFI348F,261,827
est48=CHH352F,265,848
est49=CHM205F,265,855
est50=SHL214F,265,853
est51=SHH161F,266,849
est52=CHK170F,267,919
est53=CHG413F,268,699
est54=CHM212F,268,867
est55=VHP536F,268,846
est56=CHI317F,272,852
est57=CHO171F,272,848
est58=CHQ132F,272,699
est59=SHA237F,272,918
est60=SHD812F,272,872
est61=VHF466F,272,847
est62=VHM805F,272,917
est63=SHC344F,273,915
est64=SHK836F,273,849
est65=SHL120F,278,915
est66=SHH875F,283,779
est67=CHI145F,286,849
est68=CHM216F,287,830
est69=CHM370F,288,851
est70=VHH220F,325,919
est71=VHF617F,363,693
est72=CHI422F,394,1021
est73=CHM724F,403,680
est74=VHN252F,682,1169
est75=FC-AI17F,1074,1660
est76=AFI608F,1166,1778
est77=AFH492F,1172,1774
est78=AFN776F,1239,1779
est79=SLB820F,1312,2009
est80=CFI666Z,1350,1770
est81=AHF182Z,1725,2247
est82=VHE881Z,1725,2160
est83=VHE781Z,1876,2159
est84=CHM205Z,2028,2842
est85=CHM216Z,2066,2849
est86=AHH590Z,2072,2612
est87=AHH312Z,2073,2621
est88=SHA237Z,2073,2852
est89=SHD883Z,2073,2650
est90=SHG228Z,2073,2623
est91=AHB795Z,2074,2841
est92=AHE243Z,2088,2852
est93=SHL214Z,2089,2799
est94=AHL870Z,2091,2855
est95=AHN241Z,2091,2842
est96=CHR303Z,2092,2769
est97=VHA255Z,2096,2847
est98=VHP536Z,2106,2855
est99=SHL120Z,2107,2837
est100=AHE432Z,2109,2862
est101=AHE493Z,2111,2862
est102=AHL521Z,2111,2746
est103=SHC344Z,2111,2851
est104=SHG171Z,2111,2722
est105=SHK836Z,2111,2852
est106=AHE179Z,2112,2854
est107=CHI475Z,2112,2852
est108=AHB228Z,2122,2673
est109=AHK138Z,2122,2634
est110=AFI608Z,2123,2854
est111=CHQ588Z,2123,2657
est112=AHE639Z,2125,2653
est113=AHH292Z,2125,2628
est114=AHN665Z,2127,2854
est115=SHE603Z,2127,2656
est116=CHH143Z,2128,2853
est117=SHJ771Z,2128,2618
est118=SHG164Z,2132,2749
est119=AFN776Z,2133,2842
est120=CHI422Z,2133,2863
est121=AHB559Z,2134,2840
est122=SHC461Z,2134,2708
est123=CHL363Z,2135,2654
est124=SHC460Z,2143,2670
est125=AHH288Z,2148,2634
est126=CHM370Z,2150,2842
est127=AHK611Z,2153,2671
est128=AHB711Z,2157,2855
est129=AHK179Z,2159,2854
est130=AHF166Z,2160,2654
est131=SHK407Z,2160,2849
est132=VHL189Z,2160,2669
est133=AHA355Z,2161,2839
est134=CHI317Z,2161,2843
est135=VHH220Z,2161,2812
est136=VHN252Z,2161,2795
est137=AHA164Z,2162,2855
est138=AHL821Z,2162,2834
est139=SHD812Z,2162,2852
est140=AHC250Z,2163,2651
est141=AHL747Z,2163,2638
est142=AHO628Z,2163,2842
est143=CHG413Z,2163,2843
est144=SHD326Z,2163,2851
est145=SHE521Z,2163,2833
est146=SHE715Z,2163,2647
est147=SHK352Z,2163,2643
est148=AHC449Z,2164,2632
est149=AHN414Z,2164,2850
est150=CHI145Z,2164,2861
est151=CHM212Z,2164,2855
est152=CHN271Z,2164,2843
est153=CHO171Z,2164,2837
est154=AHQ686Z,2165,2652
est155=AHA387Z,2166,2619
est156=SHL673Z,2166,2641
est157=CHR103Z,2167,2794
est158=SFI348Z,2173,2851
est159=AHN275Z,2178,2841
est160=CHE714Z,2178,2856
est161=AHQ253Z,2182,2841
est162=CHH352Z,2198,2856
est163=VHF617Z,2199,2809
est164=AHJ755Z,2200,2756
est165=AHR240Z,2201,2854
est166=SHE892Z,2201,2647
est167=CHH486Z,2204,2654
est168=AHN283Z,2205,2654
est169=AHN580Z,2206,2636
est170=AHQ582Z,2206,2855
est171=CHJ373Z,2206,2864
est172=CHP755Z,2207,2739
est173=AFH492Z,2208,2855
est174=CHH333Z,2208,2838
est175=CHQ132Z,2208,2843
est176=VHM805Z,2235,2795
est177=VHF466Z,2239,2835
est178=CHJ538Z,2242,2705
est179=SLB820Z,2242,2861
est180=SHH161Z,2244,2851
est181=CHJ737Z,2247,2856
est182=CHK187Z,2247,2696
est183=FC-AI17Z,2248,2872
est184=AHP493Z,2262,2648
est185=SHD756Z,2268,2860
est186=AHG741Z,2271,2649
est187=AHN228Z,2273,2699
est188=AHP452Z,2277,2695
est189=AHP563Z,2289,2874
est190=CHJ579Z,2289,2841
est191=SHB795Z,2294,2837
est192=SHB644Z,2299,2861
est193=AHP414Z,2302,2840
est194=CHK170Z,2303,2827
est195=AHL881Z,2304,2641
est196=SHH462Z,2304,2656
est197=AFC844Z,2316,2834
est198=AHG467Z,2361,2646
est199=FC-AX08Z,2371,2853
est200=CHP248Z,2405,2725
est201=AHG661Z,2471,2794
est202=SLB137E,2491,2866
est203=AHE886Z,2503,2637
est204=SLA577E,2606,2866
est205=SLD864Z,2609,2866
Translated Amino Acid sequence
gllekfifyfffml*liiylfiyfsiylylff*kkfkkffnv***LKKKKKKILTPFKKK
KKIXQFWGLKKK---

---TVGLLAFLFFLYFLFLIINFILI*ns*fyi*nkkik*k*tkkniqifqtlnqrkfmk
qtiimntntkkkmthqkllyqnvns*kkmkiiqfhsqscvnvwsfccnqees*ei*ciid
skwidsflvislylkfkiyyihkekiknligllkfkn*nvi*lvkleeiih*keilivli
relhf*lkivvifkmy*qtklvlkhqnireikrnqsllmiqrn*kpikisftyfkqnqni
wqvwfi*fnqskwspswvpss*hclvmhshqeksfsyslsidfqfkrxwqtlqplvissr
ltlsfqr*lspttnvnkvpti*rlslvqsclmssnks*iss*nqi*smlpsslnkrlepv
krvhsiemshmrkl*kfqrlpklsrlvsin*spfvnnssmvslvh*ivfhmvfvgfvnks
ikslkrispnqlkmkfsrslvtlftivsfklpwslqrnmiwsvvkfiqppvri*smyqky
ykhfsillnlvplkntlfl*mvgspliwvtlkiiskrslksvnqkiiskliniwnslkkl
nqslsspfqrfvilinssqri*ihslpkvkrmiq*esl*rnsmnlvhhqillpmmivkfn
*lfpinskkplkrnyhqvkvfslkpkrwsslyfvlfqlfqnkktnlmnhpnlvdvlnkar
qadpslepeikkildnlkkleeynlttsadnyssflkavalevvnraeireqqkkekqrl
ttslnnlrkhqkylneqiaqynqylqdcrlkhyqnkskkkkkgdgakvgpfkfsfselhk
kgvivdsevpqitrkkikfvissdtvgvfdvsakmagidvqtmrlelddllelnsigttt
leldqitldvnmtihllnklfly*st**iknk*knivvlknkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
wptgkiyflfffyvvvnnlfiylflylfvfiflkki*kif*ciiiikkkkkknfnpi*kk
kknfxilgfkkk---

---TVGLLAFLFFLYFLFLIINFILI*ns*fyi*nkkik*k*tkkniqifqtlnqrkfmk
qtiimntntkkkmthqkllyqnvns*kkmkiiqfhsqscvnvwsfccnqees*ei*ciid
skwidsflvislylkfkiyyihkekiknligllkfkn*nvi*lvkleeiih*keilivli
relhf*lkivvifkmy*qtklvlkhqnireikrnqsllmiqrn*kpikisftyfkqnqni
wqvwfi*fnqskwspswvpss*hclvmhshqeksfsyslsidfqfkrxwqtlqplvissr
ltlsfqr*lspttnvnkvpti*rlslvqsclmssnks*iss*nqi*smlpsslnkrlepv
krvhsiemshmrkl*kfqrlpklsrlvsin*spfvnnssmvslvh*ivfhmvfvgfvnks
ikslkrispnqlkmkfsrslvtlftivsfklpwslqrnmiwsvvkfiqppvri*smyqky
ykhfsillnlvplkntlfl*mvgspliwvtlkiiskrslksvnqkiiskliniwnslkkl
nqslsspfqrfvilinssqri*ihslpkvkrmiq*esl*rnsmnlvhhqillpmmivkfn
*lfpinskkplkrnyhqvkvfslkpkrwsslyfvlfqlfqnkktnlmnhpnlvdvlnkar
qadpslepeikkildnlkkleeynlttsadnyssflkavalevvnraeireqqkkekqrl
ttslnnlrkhqkylneqiaqynqylqdcrlkhyqnkskkkkkgdgakvgpfkfsfselhk
kgvivdsevpqitrkkikfvissdtvgvfdvsakmagidvqtmrlelddllelnsigttt
leldqitldvnmtihllnklfly*st**iknk*knivvlknkkkkkkk

Frame B:
gllekfifyfffml*liiylfiyfsiylylff*kkfkkffnv***LKKKKKKILTPFKKK
KKIXQFWGLKKK---

---llaywlfyffyifsf**lilf*ykthnfiykikk*nkneqrrifryfrl*irgss*n
kqs**trtrrrr*htrncctrt*ilkrr*rlfssipsha*mfgpfvaikknlkrydvl*i
qng*ipfw*slci*nsksitftkrr*ri*ldc*nsrikt*fs**s*kksyirkrs*ss**
enctfn*ksw*ysrcisrqsws*stkt*grsketray**skeirslsksllltsnrtkif
grfglfdstrangvllgyrhldivw*cihtkrrvsltlsl*tfnskgdgkhcnrw*fpqg
*hcrskddyhlqqt*tryrlfegchwsnlv*chqtrvesrvetkfslcchhl*trd*nr*
keytr*kclt*esfrssrgyqnyqgscrsidlhl*tiprwyh*fiesssiwysldl*tnl
snr*kefhqinsr*nsqghwllyllsfhsschglsrgi*fgrs*nssnrp*efnqciksi
tstfqfcsiwfl*ktlysfewldhlsyg*h*klsprdh*sr*trrlsps**iygthskn*
tshyhlpsrdl*yssthlkefrftrcqr*kg*snenhyegtr*iwsttryccr**s*ssi
dsfq*ipknh*rgiitr*ksslsnqrdghlftscssnssrtkrpi**ttpilsmf*trlv
klihlwsqkskrslitsknlkniispplpiiiplssrqshsk*livlkfvnnkrrrnkd*
ppl*iifvniknistnkslntintskivvsniiktrakrrrremvpklvlsnsvsanftr
kvssstlkflksperrlnlslaliplvclmsllkwlvsmfklcvwnlmtf*nsiqlapql
*n*iksl*mli*pyiy*tnfsyisqlnk*kinkkilly*rikkkkkk

Frame C:
aywknlffifflccs**fiylfislficiyffkknlknflmynnn*kkkkkkf*phlkkk
kkfxnfgv*kk---

---cwptgffiffifslfnn*fyfnikliilyik*knkikmnkeeysdisdseseevhet
nnhneheheeeddtpeivvperkflkededysvpfpvmreclvlllqsrrilrdmmyyrf
kmdrflsgnlsvfeiqnllhsqredkesdwiaeiqelkrnlvsevrrnhtlerdlnrldk
rialliknrgniqdvladkaglkapkhkgdqkkpelindpkkleayqnlfyllqtepkyl
aglvyliqpeqmesflgtviltlfgdaftpreeflllslyrlsiqkxmaniatvgdflka
dtvvpkmiitynkrkqgtdylkavigpilsnvikqelnlelkpnlvyaaiiseqeirtge
kstldrnvshekalevpevtktikarvdqlisiceqfldgiisslnrlpygirwickqiy
qiaeknftkstqdeilkvigyfiyyrfiqvamvspeeydlvgreihptarknlinvskvl
qalfnfaqfgssekhfiplngwitshmgdiknylqeiievgepedylqvdkymeltqktk
pviiislpeicnthqlisknldslvakgekddpmriimkeldefgpppdiaadddrevql
tlsnkfqktieeelspgesllsqtkemvisllralptlpeqkdqsdeppqscrcfkqgss
s*sifgarnqkdp**pqkt*ri*shhlcr*lflfpqgsrtrss*sc*ns*ttkegetkin
hlfe*ss*tskisqrtnrsiqsipprlssqtlskqeqkeeegrwcqswsfqiqfqrtsqe
rchrrl*sssnhqked*ich*l*yrwcv*clc*ngwyrcsnyafgt**pfrtqfnwhhnf
rirsnhfrc*ydhtfikqtflilvnlinkk*ikkyccike*kkkkkk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15690-1 (Contig-U15690-1Q)
/CSM_Contig/Contig-U15690-1Q.Seq.d
(2882 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15690-1 (Contig-U15690-1Q) /CSM_Contig/Conti... 4898 0.0
Contig-U14152-1 (Contig-U14152-1Q) /CSM_Contig/Conti... 860 0.0
Contig-U13702-1 (Contig-U13702-1Q) /CSM_Contig/Conti... 56 3e-07
Contig-U15945-1 (Contig-U15945-1Q) /CSM_Contig/Conti... 52 5e-06
Contig-U11197-1 (Contig-U11197-1Q) /CSM_Contig/Conti... 48 8e-05
Contig-U03598-1 (Contig-U03598-1Q) /CSM_Contig/Conti... 40 0.019
Contig-U16241-1 (Contig-U16241-1Q) /CSM_Contig/Conti... 38 0.074
Contig-U15325-1 (Contig-U15325-1Q) /CSM_Contig/Conti... 38 0.074
Contig-U14342-1 (Contig-U14342-1Q) /CSM_Contig/Conti... 38 0.074
Contig-U13927-1 (Contig-U13927-1Q) /CSM_Contig/Conti... 38 0.074

>Contig-U15690-1 (Contig-U15690-1Q) /CSM_Contig/Contig-U15690-1Q.Seq.d
Length = 2882

Score = 4898 bits (2471), Expect = 0.0
Identities = 2474/2474 (100%)
Strand = Plus / Plus


Query: 342 tgaacaaagaagaatattcagatatttcagactctgaatcagaggaagttcatgaaacaa 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgaacaaagaagaatattcagatatttcagactctgaatcagaggaagttcatgaaacaa 401


Query: 402 acaatcataatgaacacgaacacgaagaagaagatgacacaccagaaattgttgtaccag 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 acaatcataatgaacacgaacacgaagaagaagatgacacaccagaaattgttgtaccag 461


Query: 462 aacgtaaattcttaaaagaagatgaagattattcagttccattcccagtcatgcgtgaat 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aacgtaaattcttaaaagaagatgaagattattcagttccattcccagtcatgcgtgaat 521


Query: 522 gtttggtccttttgttgcaatcaagaagaatcttaagagatatgatgtattatagattca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtttggtccttttgttgcaatcaagaagaatcttaagagatatgatgtattatagattca 581


Query: 582 aaatggatagattcctttctggtaatctctctgtatttgaaattcaaaatctattacatt 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aaatggatagattcctttctggtaatctctctgtatttgaaattcaaaatctattacatt 641


Query: 642 cacaaagagaagataaagaatctgattggattgctgaaattcaagaattaaaacgtaatt 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 cacaaagagaagataaagaatctgattggattgctgaaattcaagaattaaaacgtaatt 701


Query: 702 tagttagtgaagttagaagaaatcatacattagaaagagatcttaatcgtcttgataaga 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tagttagtgaagttagaagaaatcatacattagaaagagatcttaatcgtcttgataaga 761


Query: 762 gaattgcacttttaattaaaaatcgtggtaatattcaagatgtattagcagacaaagctg 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gaattgcacttttaattaaaaatcgtggtaatattcaagatgtattagcagacaaagctg 821


Query: 822 gtcttaaagcaccaaaacataagggagatcaaaagaaaccagagcttattaatgatccaa 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gtcttaaagcaccaaaacataagggagatcaaaagaaaccagagcttattaatgatccaa 881


Query: 882 agaaattagaagcctatcaaaatctcttttacttacttcaaacagaaccaaaatatttgg 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 agaaattagaagcctatcaaaatctcttttacttacttcaaacagaaccaaaatatttgg 941


Query: 942 caggtttggtttatttgattcaaccagagcaaatggagtccttcttgggtaccgtcatct 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 caggtttggtttatttgattcaaccagagcaaatggagtccttcttgggtaccgtcatct 1001


Query: 1002 tgacattgtttggtgatgcattcacaccaagagaagagtttctcttactctctctctata 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tgacattgtttggtgatgcattcacaccaagagaagagtttctcttactctctctctata 1061


Query: 1062 gactttcaattcaaaaggngatggcaaacattgcaaccgttggtgatttcctcaaggctg 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 gactttcaattcaaaaggngatggcaaacattgcaaccgttggtgatttcctcaaggctg 1121


Query: 1122 acactgtcgttccaaagatgattatcacctacaacaaacgtaaacaaggtaccgactatt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 acactgtcgttccaaagatgattatcacctacaacaaacgtaaacaaggtaccgactatt 1181


Query: 1182 tgaaggctgtcattggtccaatcttgtctaatgtcatcaaacaagagttgaatctcgagt 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 tgaaggctgtcattggtccaatcttgtctaatgtcatcaaacaagagttgaatctcgagt 1241


Query: 1242 tgaaaccaaatttagtctatgctgccatcatctctgaacaagagattagaaccggtgaaa 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 tgaaaccaaatttagtctatgctgccatcatctctgaacaagagattagaaccggtgaaa 1301


Query: 1302 agagtacactcgatagaaatgtctcacatgagaaagctttagaagttccagaggttacca 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 agagtacactcgatagaaatgtctcacatgagaaagctttagaagttccagaggttacca 1361


Query: 1362 aaactatcaaggctcgtgtcgatcaattgatctccatttgtgaacaattcctcgatggta 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 aaactatcaaggctcgtgtcgatcaattgatctccatttgtgaacaattcctcgatggta 1421


Query: 1422 tcattagttcattgaatcgtcttccatatggtattcgttggatttgtaaacaaatctatc 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 tcattagttcattgaatcgtcttccatatggtattcgttggatttgtaaacaaatctatc 1481


Query: 1482 aaatcgctgaaaagaatttcaccaaatcaactcaagatgaaattctcaaggtcattggtt 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 aaatcgctgaaaagaatttcaccaaatcaactcaagatgaaattctcaaggtcattggtt 1541


Query: 1542 actttatttactatcgtttcattcaagttgccatggtctctccagaggaatatgatttgg 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 actttatttactatcgtttcattcaagttgccatggtctctccagaggaatatgatttgg 1601


Query: 1602 tcggtcgtgaaattcatccaaccgcccgtaagaatttaatcaatgtatcaaaagtattac 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 tcggtcgtgaaattcatccaaccgcccgtaagaatttaatcaatgtatcaaaagtattac 1661


Query: 1662 aagcacttttcaattttgctcaatttggttcctctgaaaaacactttattcctttgaatg 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1662 aagcacttttcaattttgctcaatttggttcctctgaaaaacactttattcctttgaatg 1721


Query: 1722 gttggatcacctctcatatgggtgacattaaaaattatctccaagagatcattgaagtcg 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 gttggatcacctctcatatgggtgacattaaaaattatctccaagagatcattgaagtcg 1781


Query: 1782 gtgaaccagaagattatctccaagttgataaatatatggaactcactcaaaaaactaaac 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1782 gtgaaccagaagattatctccaagttgataaatatatggaactcactcaaaaaactaaac 1841


Query: 1842 cagtcattatcatctcccttccagagatttgtaatactcatcaactcatctcaaagaatt 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 cagtcattatcatctcccttccagagatttgtaatactcatcaactcatctcaaagaatt 1901


Query: 1902 tagattcactcgttgccaaaggtgaaaaggatgatccaatgagaatcattatgaaggaac 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 tagattcactcgttgccaaaggtgaaaaggatgatccaatgagaatcattatgaaggaac 1961


Query: 1962 tcgatgaatttggtccaccaccagatattgctgccgatgatgatcgtgaagttcaattga 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1962 tcgatgaatttggtccaccaccagatattgctgccgatgatgatcgtgaagttcaattga 2021


Query: 2022 ctctttccaataaattccaaaaaaccattgaagaggaattatcaccaggtgaaagtcttc 2081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2022 ctctttccaataaattccaaaaaaccattgaagaggaattatcaccaggtgaaagtcttc 2081


Query: 2082 tctctcaaaccaaagagatggtcatctctttacttcgtgctcttccaactcttccagaac 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2082 tctctcaaaccaaagagatggtcatctctttacttcgtgctcttccaactcttccagaac 2141


Query: 2142 aaaaagaccaatctgatgaaccaccccaatcttgtcgatgttttaaacaaggctcgtcaa 2201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 aaaaagaccaatctgatgaaccaccccaatcttgtcgatgttttaaacaaggctcgtcaa 2201


Query: 2202 gctgatccatctttggagccagaaatcaaaaagatccttgataacctcaaaaaacttgaa 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2202 gctgatccatctttggagccagaaatcaaaaagatccttgataacctcaaaaaacttgaa 2261


Query: 2262 gaatataatctcaccacctctgccgataattattcctctttcctcaaggcagtcgcactc 2321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2262 gaatataatctcaccacctctgccgataattattcctctttcctcaaggcagtcgcactc 2321


Query: 2322 gaagtagttaatcgtgctgaaattcgtgaacaacaaaagaaggagaaacaaagattaacc 2381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2322 gaagtagttaatcgtgctgaaattcgtgaacaacaaaagaaggagaaacaaagattaacc 2381


Query: 2382 acctctttgaataatcttcgtaaacatcaaaaatatctcaacgaacaaatcgctcaatac 2441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2382 acctctttgaataatcttcgtaaacatcaaaaatatctcaacgaacaaatcgctcaatac 2441


Query: 2442 aatcaatacctccaagattgtcgtctcaaacattatcaaaacaagagcaaaaagaagaag 2501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2442 aatcaatacctccaagattgtcgtctcaaacattatcaaaacaagagcaaaaagaagaag 2501


Query: 2502 aagggagatggtgccaaagttggtcctttcaaattcagtttcagcgaacttcacaagaaa 2561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2502 aagggagatggtgccaaagttggtcctttcaaattcagtttcagcgaacttcacaagaaa 2561


Query: 2562 ggtgtcatcgtcgactctgaagttcctcaaatcaccagaaagaagattaaatttgtcatt 2621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2562 ggtgtcatcgtcgactctgaagttcctcaaatcaccagaaagaagattaaatttgtcatt 2621


Query: 2622 agctctgataccgttggtgtgtttgatgtctctgctaaaatggctggtatcgatgttcaa 2681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2622 agctctgataccgttggtgtgtttgatgtctctgctaaaatggctggtatcgatgttcaa 2681


Query: 2682 actatgcgtttggaacttgatgaccttttagaactcaattcaattggcaccacaacttta 2741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2682 actatgcgtttggaacttgatgaccttttagaactcaattcaattggcaccacaacttta 2741


Query: 2742 gaattagatcaaatcactttagatgttaatatgaccatacatttattaaacaaacttttc 2801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2742 gaattagatcaaatcactttagatgttaatatgaccatacatttattaaacaaacttttc 2801


Query: 2802 ttatattagtcaac 2815
||||||||||||||
Sbjct: 2802 ttatattagtcaac 2815


Score = 40.1 bits (20), Expect = 0.019
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1 tggcctactggaaaaattta 20
||||||||||||||||||||
Sbjct: 1 tggcctactggaaaaattta 20


Score = 34.2 bits (17), Expect = 1.2
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 228 actgttggcctactggc 244
|||||||||||||||||
Sbjct: 228 actgttggcctactggc 244


Score = 34.2 bits (17), Expect = 1.2
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 122 aatgtataataataatt 138
|||||||||||||||||
Sbjct: 122 aatgtataataataatt 138


Score = 32.2 bits (16), Expect = 4.6
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 189 ttttncaattttggggttt 207
|||||||||||||||||||
Sbjct: 189 ttttncaattttggggttt 207


>Contig-U14152-1 (Contig-U14152-1Q) /CSM_Contig/Contig-U14152-1Q.Seq.d
Length = 591

Score = 860 bits (434), Expect = 0.0
Identities = 446/449 (99%), Gaps = 1/449 (0%)
Strand = Plus / Plus


Query: 1984 agatattgctgccgatgatgatcgtgaagttcaattgactctttccaataaattccaaaa 2043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 agatattgctgccgatgatgatcgtgaagttcaattgactctttccaataaattccaaaa 70


Query: 2044 aaccattgaagaggaattatcaccaggtgaaagtcttctctctcaaaccaaagagatggt 2103
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 71 aaccattgaagaggaattatcaccaggtgaaagtcttntctctcaaaccaaagagatggt 130


Query: 2104 catctctttacttcgtgctcttccaactcttccagaacaaaaagaccaatctgatgaacc 2163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 catctctttacttcgtgctcttccaactcttccagaacaaaaagaccaatctgatgaacc 190


Query: 2164 accccaatcttgtcgatgttttaaacaaggctcgtcaagctgatccatctttggagccag 2223
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 accc-aatcttgtcgatgttttaaacaaggctcgtcaagctgatccatctttggagccag 249


Query: 2224 aaatcaaaaagatccttgataacctcaaaaaacttgaagaatataatctcaccacctctg 2283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaatcaaaaagatccttgataacctcaaaaaacttgaagaatataatctcaccacctctg 309


Query: 2284 ccgataattattcctctttcctcaaggcagtcgcactcgaagtagttaatcgtgctgaaa 2343
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 310 ccgataattattcctctttcctcaaggcagtcgcactcgaagtagttaatcgtgctgaga 369


Query: 2344 ttcgtgaacaacaaaagaaggagaaacaaagattaaccacctctttgaataatcttcgta 2403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttcgtgaacaacaaaagaaggagaaacaaagattaaccacctctttgaataatcttcgta 429


Query: 2404 aacatcaaaaatatctcaacgaacaaatc 2432
|||||||||||||||||||||||||||||
Sbjct: 430 aacatcaaaaatatctcaacgaacaaatc 458


Score = 252 bits (127), Expect = 3e-66
Identities = 135/139 (97%)
Strand = Plus / Plus


Query: 2589 caaatcaccagaaagaagattaaatttgtcattagctctgataccgttggtgtgtttgat 2648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 caaatcaccagaaagaagattaaatttgtcattagctctgataccgttggtgtgtttgat 512


Query: 2649 gtctctgctaaaatggctggtatcgatgttcaaactatgcgtttggaacttgatgacctt 2708
|| | || |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gtntntgntaaaatggntggtatcgatgttcaaactatgcgtttggaacttgatgacctt 572


Query: 2709 ttagaactcaattcaattg 2727
|||||||||||||||||||
Sbjct: 573 ttagaactcaattcaattg 591


>Contig-U13702-1 (Contig-U13702-1Q) /CSM_Contig/Contig-U13702-1Q.Seq.d
Length = 510

Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus


Query: 663 ctgattggattgctgaaattcaagaattaaaa 694
|||||||||| |||||||||||||||||||||
Sbjct: 426 ctgattggatcgctgaaattcaagaattaaaa 457


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 48,982
Number of Sequences: 8402
Number of extensions: 48982
Number of successful extensions: 4349
Number of sequences better than 10.0: 665
length of query: 2882
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2865
effective length of database: 7,932,708
effective search space: 22727208420
effective search space used: 22727208420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2.10
Homology vs DNA
Query= Contig-U15690-1 (Contig-U15690-1Q) /CSM_Contig/Contig-U15690-1Q.Seq.d
(2882 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(L75794) Dictyostelium discoideum RasGTPase-activating prote... 3598 0.0 2
(U81156) Dictyostelium discoideum RasGAP1 (rgaA) gene, compl... 3590 0.0 2
(BJ403195) Dictyostelium discoideum cDNA clone:dds24i10, 3' ... 1455 0.0 1
(BJ354761) Dictyostelium discoideum cDNA clone:dda54l18, 3' ... 1419 0.0 1
(BJ350271) Dictyostelium discoideum cDNA clone:dda39e12, 3' ... 1417 0.0 1
(AU060870) Dictyostelium discoideum slug cDNA, clone SLB820. 1384 0.0 1
(BJ404378) Dictyostelium discoideum cDNA clone:dds28h11, 3' ... 1380 0.0 1
(BJ350322) Dictyostelium discoideum cDNA clone:dda39p08, 3' ... 1376 0.0 1
(BJ380631) Dictyostelium discoideum cDNA clone:ddc38f20, 3' ... 1364 0.0 1
(BJ348841) Dictyostelium discoideum cDNA clone:dda34e15, 3' ... 1322 0.0 1
(BJ408515) Dictyostelium discoideum cDNA clone:dds46g05, 3' ... 1291 0.0 2
(BJ408292) Dictyostelium discoideum cDNA clone:dds45h10, 3' ... 1291 0.0 2
(BJ382859) Dictyostelium discoideum cDNA clone:ddc46i02, 3' ... 1291 0.0 2
(BJ380439) Dictyostelium discoideum cDNA clone:ddc38l06, 3' ... 1291 0.0 2
(BJ379880) Dictyostelium discoideum cDNA clone:ddc36e11, 3' ... 1291 0.0 2
(BJ355482) Dictyostelium discoideum cDNA clone:dda57a12, 3' ... 1291 0.0 2
(BJ350453) Dictyostelium discoideum cDNA clone:dda39m19, 3' ... 1291 0.0 2
(BJ348965) Dictyostelium discoideum cDNA clone:dda34n23, 3' ... 1291 0.0 2
(BJ345790) Dictyostelium discoideum cDNA clone:dda28h19, 3' ... 1291 0.0 2
(BJ344344) Dictyostelium discoideum cDNA clone:dda18o02, 3' ... 1291 0.0 2
(BJ350443) Dictyostelium discoideum cDNA clone:dda39j24, 3' ... 1285 0.0 2
(BJ446308) Dictyostelium discoideum cDNA clone:ddv62g09, 3' ... 1283 0.0 2
(BJ407950) Dictyostelium discoideum cDNA clone:dds44n02, 3' ... 1283 0.0 1
(BJ440903) Dictyostelium discoideum cDNA clone:ddv45g06, 3' ... 1281 0.0 1
(BJ348702) Dictyostelium discoideum cDNA clone:dda34f03, 3' ... 1281 0.0 1
(BJ347940) Dictyostelium discoideum cDNA clone:dda31n13, 3' ... 1281 0.0 1
(BJ405257) Dictyostelium discoideum cDNA clone:dds31h04, 3' ... 1279 0.0 1
(BJ383034) Dictyostelium discoideum cDNA clone:ddc46l17, 3' ... 1279 0.0 1
(BJ353922) Dictyostelium discoideum cDNA clone:dda51m19, 3' ... 1279 0.0 1
(BJ404991) Dictyostelium discoideum cDNA clone:dds30d07, 3' ... 1277 0.0 1
(BJ382851) Dictyostelium discoideum cDNA clone:ddc46g04, 3' ... 1277 0.0 1
(BJ380496) Dictyostelium discoideum cDNA clone:ddc38i11, 3' ... 1277 0.0 1
(BJ356443) Dictyostelium discoideum cDNA clone:dda60g08, 3' ... 1277 0.0 1
(BJ380385) Dictyostelium discoideum cDNA clone:ddc38b05, 3' ... 1275 0.0 1
(BJ355457) Dictyostelium discoideum cDNA clone:dda57l04, 3' ... 1275 0.0 1
(BJ408534) Dictyostelium discoideum cDNA clone:dds46k04, 3' ... 1273 0.0 2
(BJ379211) Dictyostelium discoideum cDNA clone:ddc34j04, 3' ... 1273 0.0 1
(BJ347948) Dictyostelium discoideum cDNA clone:dda31o15, 3' ... 1273 0.0 1
(BJ354592) Dictyostelium discoideum cDNA clone:dda54j06, 3' ... 1271 0.0 1
(BJ384223) Dictyostelium discoideum cDNA clone:ddc48m18, 3' ... 1269 0.0 1
(BJ332531) Dictyostelium discoideum cDNA clone:dda39p08, 5' ... 1267 0.0 1
(BJ444827) Dictyostelium discoideum cDNA clone:ddv57g14, 3' ... 1259 0.0 1
(BJ402605) Dictyostelium discoideum cDNA clone:dds17p11, 3' ... 1257 0.0 1
(BJ405818) Dictyostelium discoideum cDNA clone:dds33i05, 3' ... 1251 0.0 1
(BJ366209) Dictyostelium discoideum cDNA clone:ddc38l06, 5' ... 1245 0.0 1
(BJ378493) Dictyostelium discoideum cDNA clone:ddc31l03, 3' ... 1243 0.0 1
(BJ357451) Dictyostelium discoideum cDNA clone:dda63i14, 3' ... 1219 0.0 1
(BJ336656) Dictyostelium discoideum cDNA clone:dda54l18, 5' ... 1215 0.0 1
(BJ339466) Dictyostelium discoideum cDNA clone:dda65o10, 5' ... 1205 0.0 1
(BJ326835) Dictyostelium discoideum cDNA clone:dda18o02, 5' ... 1205 0.0 1
(BJ358004) Dictyostelium discoideum cDNA clone:dda65o10, 3' ... 1201 0.0 1
(BJ406867) Dictyostelium discoideum cDNA clone:dds36o15, 3' ... 1197 0.0 1
(BJ326225) Dictyostelium discoideum cDNA clone:dda15h24, 5' ... 1195 0.0 1
(BJ379968) Dictyostelium discoideum cDNA clone:ddc36h13, 3' ... 1193 0.0 1
(BJ385288) Dictyostelium discoideum cDNA clone:ddc54o07, 3' ... 1191 0.0 1
(BJ384778) Dictyostelium discoideum cDNA clone:ddc50m17, 3' ... 1185 0.0 2
(BJ379865) Dictyostelium discoideum cDNA clone:ddc36b09, 3' ... 1185 0.0 1
(BJ343017) Dictyostelium discoideum cDNA clone:dda15h24, 3' ... 1179 0.0 1
(BJ381200) Dictyostelium discoideum cDNA clone:ddc40b19, 3' ... 1176 0.0 1
(BJ357805) Dictyostelium discoideum cDNA clone:dda64c21, 3' ... 1170 0.0 1
(BJ336499) Dictyostelium discoideum cDNA clone:dda54j06, 5' ... 1166 0.0 1
(AU284288) Dictyostelium discoideum gamete cDNA clone:FC-AI1... 1164 0.0 1
(BJ422168) Dictyostelium discoideum cDNA clone:ddv45g06, 5' ... 1164 0.0 1
(BJ367417) Dictyostelium discoideum cDNA clone:ddc42k17, 5' ... 1164 0.0 1
(BJ425557) Dictyostelium discoideum cDNA clone:ddv56j02, 5' ... 1162 0.0 1
(BJ391554) Dictyostelium discoideum cDNA clone:dds24i10, 5' ... 1162 0.0 1
(BJ397378) Dictyostelium discoideum cDNA clone:dds46g05, 5' ... 1156 0.0 1
(BJ392623) Dictyostelium discoideum cDNA clone:dds28h11, 5' ... 1156 0.0 1
(BJ332658) Dictyostelium discoideum cDNA clone:dda39j24, 5' ... 1134 0.0 1
(BJ382885) Dictyostelium discoideum cDNA clone:ddc46o04, 3' ... 1126 0.0 1
(BJ331146) Dictyostelium discoideum cDNA clone:dda34f03, 5' ... 1126 0.0 2
(BJ355869) Dictyostelium discoideum cDNA clone:dda58a18, 3' ... 1124 0.0 3
(AU034026) Dictyostelium discoideum slug cDNA, clone SLB820. 1120 0.0 1
(BJ381390) Dictyostelium discoideum cDNA clone:ddc41j09, 3' ... 1116 0.0 1
(AU284289) Dictyostelium discoideum gamete cDNA clone:FC-AI1... 1108 0.0 1
(BJ436601) Dictyostelium discoideum cDNA clone:ddv31m14, 3' ... 1106 0.0 3
(BJ407452) Dictyostelium discoideum cDNA clone:dds38i15, 3' ... 1098 0.0 1
(BJ354586) Dictyostelium discoideum cDNA clone:dda54i05, 3' ... 1098 0.0 2
(BJ439895) Dictyostelium discoideum cDNA clone:ddv42a06, 3' ... 1092 0.0 1
(BJ404467) Dictyostelium discoideum cDNA clone:dds28j16, 3' ... 1092 0.0 2
(BJ406859) Dictyostelium discoideum cDNA clone:dds36m17, 3' ... 1063 0.0 2
(BJ355652) Dictyostelium discoideum cDNA clone:dda57e20, 3' ... 999 0.0 2
(BJ405474) Dictyostelium discoideum cDNA clone:dds31f22, 3' ... 914 0.0 3
(BJ352916) Dictyostelium discoideum cDNA clone:dda48h12, 3' ... 914 0.0 4
(BJ385760) Dictyostelium discoideum cDNA clone:ddc56f01, 3' ... 876 0.0 4
(BJ444358) Dictyostelium discoideum cDNA clone:ddv56j02, 3' ... 1041 0.0 2
(BJ357561) Dictyostelium discoideum cDNA clone:dda63n22, 3' ... 521 0.0 3
(BJ338949) Dictyostelium discoideum cDNA clone:dda63i14, 5' ... 1072 0.0 1
(BJ328612) Dictyostelium discoideum cDNA clone:dda28h19, 5' ... 1072 0.0 1
(BJ392349) Dictyostelium discoideum cDNA clone:dds27g12, 5' ... 1070 0.0 2
(BJ393370) Dictyostelium discoideum cDNA clone:dds31h04, 5' ... 1070 0.0 1
(BJ353570) Dictyostelium discoideum cDNA clone:dda50n13, 3' ... 1070 0.0 1
(BJ337383) Dictyostelium discoideum cDNA clone:dda57a12, 5' ... 1070 0.0 1
(BJ405446) Dictyostelium discoideum cDNA clone:dds31p13, 3' ... 1068 0.0 1
(BJ406752) Dictyostelium discoideum cDNA clone:dds36g08, 3' ... 918 0.0 2
(BJ368289) Dictyostelium discoideum cDNA clone:ddc46g04, 5' ... 1061 0.0 1
(BJ351938) Dictyostelium discoideum cDNA clone:dda45h03, 3' ... 914 0.0 2
(BJ385755) Dictyostelium discoideum cDNA clone:ddc56e01, 3' ... 410 0.0 6
(BJ352441) Dictyostelium discoideum cDNA clone:dda46c23, 3' ... 896 0.0 2
(BJ383625) Dictyostelium discoideum cDNA clone:ddc53n13, 3' ... 1041 0.0 1
(BJ368295) Dictyostelium discoideum cDNA clone:ddc46i02, 5' ... 1037 0.0 1
(BJ381561) Dictyostelium discoideum cDNA clone:ddc41m19, 3' ... 1033 0.0 1
(BJ334941) Dictyostelium discoideum cDNA clone:dda48h12, 5' ... 1033 0.0 1
(BJ357167) Dictyostelium discoideum cDNA clone:dda62m15, 3' ... 1031 0.0 1
(BJ332490) Dictyostelium discoideum cDNA clone:dda39e12, 5' ... 1031 0.0 1
(BJ405799) Dictyostelium discoideum cDNA clone:dds33e02, 3' ... 991 0.0 2
(BJ393545) Dictyostelium discoideum cDNA clone:dds31p13, 5' ... 1027 0.0 1
(BJ393143) Dictyostelium discoideum cDNA clone:dds30d07, 5' ... 1027 0.0 1
(BJ385728) Dictyostelium discoideum cDNA clone:ddc55o21, 3' ... 977 0.0 2
(BJ418105) Dictyostelium discoideum cDNA clone:ddv31m14, 5' ... 1025 0.0 1
(BJ397395) Dictyostelium discoideum cDNA clone:dds46k04, 5' ... 1025 0.0 1
(BJ395365) Dictyostelium discoideum cDNA clone:dds38i15, 5' ... 1025 0.0 1
(BJ366265) Dictyostelium discoideum cDNA clone:ddc38i11, 5' ... 1025 0.0 1
(BJ338162) Dictyostelium discoideum cDNA clone:dda60h08, 5' ... 1025 0.0 1
(BJ369464) Dictyostelium discoideum cDNA clone:ddc50m17, 5' ... 1023 0.0 1
(BJ366165) Dictyostelium discoideum cDNA clone:ddc38b05, 5' ... 1023 0.0 1
(BJ365783) Dictyostelium discoideum cDNA clone:ddc36h13, 5' ... 1023 0.0 1
(BJ365686) Dictyostelium discoideum cDNA clone:ddc36b09, 5' ... 1023 0.0 1
(BJ337722) Dictyostelium discoideum cDNA clone:dda58a18, 5' ... 1023 0.0 1
(BJ427405) Dictyostelium discoideum cDNA clone:ddv62g09, 5' ... 1021 0.0 1
(BJ421046) Dictyostelium discoideum cDNA clone:ddv41d18, 5' ... 1021 0.0 1
(BJ368424) Dictyostelium discoideum cDNA clone:ddc46l17, 5' ... 1021 0.0 1
(BJ337361) Dictyostelium discoideum cDNA clone:dda57l04, 5' ... 1021 0.0 1
(BJ330473) Dictyostelium discoideum cDNA clone:dda31n13, 5' ... 1021 0.0 1
(BJ396849) Dictyostelium discoideum cDNA clone:dds44n02, 5' ... 1017 0.0 2
(BJ397177) Dictyostelium discoideum cDNA clone:dds45h10, 5' ... 1017 0.0 1
(BJ331252) Dictyostelium discoideum cDNA clone:dda34e15, 5' ... 674 0.0 2
(BJ330481) Dictyostelium discoideum cDNA clone:dda31o15, 5' ... 1015 0.0 1
(BJ370945) Dictyostelium discoideum cDNA clone:ddc56f01, 5' ... 1013 0.0 1
(BJ353959) Dictyostelium discoideum cDNA clone:dda52e04, 3' ... 1013 0.0 1
(BJ443676) Dictyostelium discoideum cDNA clone:ddv53a23, 3' ... 1011 0.0 1
(BJ333952) Dictyostelium discoideum cDNA clone:dda44i16, 5' ... 1011 0.0 1
(BJ356694) Dictyostelium discoideum cDNA clone:dda61l04, 3' ... 1005 0.0 1
(BJ366390) Dictyostelium discoideum cDNA clone:ddc38f20, 5' ... 714 0.0 2
(BJ351020) Dictyostelium discoideum cDNA clone:dda41c21, 3' ... 844 0.0 2
(BJ350599) Dictyostelium discoideum cDNA clone:dda40m10, 3' ... 906 0.0 3
(BJ439765) Dictyostelium discoideum cDNA clone:ddv41d18, 3' ... 991 0.0 1
(BJ404458) Dictyostelium discoideum cDNA clone:dds28h16, 3' ... 975 0.0 3
(BJ367100) Dictyostelium discoideum cDNA clone:ddc41j09, 5' ... 989 0.0 1
(BJ353777) Dictyostelium discoideum cDNA clone:dda51k09, 3' ... 940 0.0 2
(BJ368316) Dictyostelium discoideum cDNA clone:ddc46o04, 5' ... 987 0.0 1
(BJ335887) Dictyostelium discoideum cDNA clone:dda51m19, 5' ... 987 0.0 1
(BJ324445) Dictyostelium discoideum cDNA clone:dda6h12, 5' e... 985 0.0 1
(BJ389090) Dictyostelium discoideum cDNA clone:dds17p11, 5' ... 981 0.0 2
(BJ382421) Dictyostelium discoideum cDNA clone:ddc44n15, 3' ... 914 0.0 3
(BJ381783) Dictyostelium discoideum cDNA clone:ddc42k17, 3' ... 977 0.0 1
(BJ341363) Dictyostelium discoideum cDNA clone:dda6h12, 3' e... 971 0.0 1
(BJ352156) Dictyostelium discoideum cDNA clone:dda45g24, 3' ... 928 0.0 2
(BJ346849) Dictyostelium discoideum cDNA clone:dda25d07, 3' ... 967 0.0 1
(BJ348465) Dictyostelium discoideum cDNA clone:dda33g08, 3' ... 916 0.0 2
(BJ365700) Dictyostelium discoideum cDNA clone:ddc36e11, 5' ... 959 0.0 1
(BJ349138) Dictyostelium discoideum cDNA clone:dda35c14, 3' ... 959 0.0 1
(BJ369907) Dictyostelium discoideum cDNA clone:ddc52o12, 5' ... 811 0.0 4
(BJ368945) Dictyostelium discoideum cDNA clone:ddc48m18, 5' ... 954 0.0 1
(BJ407802) Dictyostelium discoideum cDNA clone:dds43n17, 3' ... 916 0.0 2
(BJ408063) Dictyostelium discoideum cDNA clone:dds44h13, 3' ... 952 0.0 1
(BJ332667) Dictyostelium discoideum cDNA clone:dda39m19, 5' ... 660 0.0 2
(BJ350944) Dictyostelium discoideum cDNA clone:dda41c17, 3' ... 906 0.0 2
(BJ425936) Dictyostelium discoideum cDNA clone:ddv57g14, 5' ... 942 0.0 1
(BJ352189) Dictyostelium discoideum cDNA clone:dda45o22, 3' ... 940 0.0 1
(BJ393914) Dictyostelium discoideum cDNA clone:dds33i05, 5' ... 813 0.0 3
(BJ405836) Dictyostelium discoideum cDNA clone:dds33n03, 3' ... 900 0.0 2
(BJ392517) Dictyostelium discoideum cDNA clone:dds27n23, 5' ... 912 0.0 2
(BJ357845) Dictyostelium discoideum cDNA clone:dda64k22, 3' ... 890 0.0 2
(BJ354689) Dictyostelium discoideum cDNA clone:dda54n11, 3' ... 928 0.0 1
(BJ381396) Dictyostelium discoideum cDNA clone:ddc41k09, 3' ... 914 0.0 1
(BJ404257) Dictyostelium discoideum cDNA clone:dds27n23, 3' ... 607 0.0 2
(BJ409013) Dictyostelium discoideum cDNA clone:dds47a20, 3' ... 900 0.0 1
(BJ349134) Dictyostelium discoideum cDNA clone:dda35b14, 3' ... 892 0.0 1
(BJ381864) Dictyostelium discoideum cDNA clone:ddc42m21, 3' ... 886 0.0 1
(BJ406017) Dictyostelium discoideum cDNA clone:dds33h24, 3' ... 884 0.0 1
(BJ355654) Dictyostelium discoideum cDNA clone:dda57e22, 3' ... 880 0.0 1
(BJ395691) Dictyostelium discoideum cDNA clone:dds39f20, 5' ... 878 0.0 1
(AU284461) Dictyostelium discoideum gamete cDNA clone:FC-AX0... 864 0.0 1
(BJ380070) Dictyostelium discoideum cDNA clone:ddc36l22, 3' ... 817 0.0 2
(BJ404098) Dictyostelium discoideum cDNA clone:dds27g12, 3' ... 850 0.0 1
(BJ337529) Dictyostelium discoideum cDNA clone:dda57e20, 5' ... 839 0.0 1
(BJ375384) Dictyostelium discoideum cDNA clone:ddc18c18, 3' ... 835 0.0 1
(BJ348020) Dictyostelium discoideum cDNA clone:dda31n21, 3' ... 791 0.0 2
(BJ339276) Dictyostelium discoideum cDNA clone:dda64c21, 5' ... 827 0.0 1
(BJ356833) Dictyostelium discoideum cDNA clone:dda61h14, 3' ... 823 0.0 1
(BJ355508) Dictyostelium discoideum cDNA clone:dda57g08, 3' ... 805 0.0 1
(BJ356008) Dictyostelium discoideum cDNA clone:dda58o19, 3' ... 797 0.0 2
(BJ439529) Dictyostelium discoideum cDNA clone:ddv40b22, 3' ... 747 0.0 2
(BJ356919) Dictyostelium discoideum cDNA clone:dda61j24, 3' ... 761 0.0 1
(BJ409768) Dictyostelium discoideum cDNA clone:dds42n06, 3' ... 733 0.0 1
(BJ351672) Dictyostelium discoideum cDNA clone:dda44b11, 3' ... 733 0.0 1
(BJ370529) Dictyostelium discoideum cDNA clone:ddc54o07, 5' ... 728 0.0 1
(BJ365095) Dictyostelium discoideum cDNA clone:ddc34j04, 5' ... 728 0.0 1
(BJ407466) Dictyostelium discoideum cDNA clone:dds38l16, 3' ... 353 0.0 2
(AU033530) Dictyostelium discoideum slug cDNA, clone SLB137. 628 e-175 1
(BJ421259) Dictyostelium discoideum cDNA clone:ddv42a06, 5' ... 460 e-173 2
(BJ338704) Dictyostelium discoideum cDNA clone:dda62m15, 5' ... 563 e-166 2
(BJ354787) Dictyostelium discoideum cDNA clone:dda54b22, 3' ... 597 e-166 1
(BJ368564) Dictyostelium discoideum cDNA clone:ddc47p05, 5' ... 529 e-145 1
(BJ338366) Dictyostelium discoideum cDNA clone:dda61l04, 5' ... 511 e-140 1
(BJ439528) Dictyostelium discoideum cDNA clone:ddv40b21, 3' ... 402 e-135 2
(BJ351470) Dictyostelium discoideum cDNA clone:dda43f18, 3' ... 278 e-125 3
(BJ351789) Dictyostelium discoideum cDNA clone:dda44i16, 3' ... 442 e-119 1
(AU052740) Dictyostelium discoideum slug cDNA, clone SLD864. 394 e-105 1
(AU052128) Dictyostelium discoideum slug cDNA, clone SLA577. 373 3e-98 1
(BJ383277) Dictyostelium discoideum cDNA clone:ddc52o12, 3' ... 272 1e-82 2
(D88027) Dictyostelium discoideum gene for GAPA, complete cds. 80 3e-38 9
(BJ350750) Dictyostelium discoideum cDNA clone:dda40l22, 3' ... 109 8e-36 3
(C92665) Dictyostelium discoideum slug cDNA, clone SSF806. 48 0.001 2
(EL569496) Physarum02619 Physarum polycephalum starvation st... 38 0.022 3
(EL571919) Physarum10500 Physarum polycephalum starvation st... 38 0.024 3
(EL572148) Physarum10496 Physarum polycephalum starvation st... 38 0.035 3
(EL577466) Physarum10495 Physarum polycephalum starvation st... 38 0.039 3
(CU302322) Zebrafish DNA sequence from clone DKEY-83D6 in li... 52 0.12 1
(CR936281) Zebrafish DNA sequence from clone DKEY-246L3 in l... 52 0.12 1
(BX323566) Zebrafish DNA sequence from clone DKEYP-67A8 in l... 52 0.12 1
(BX005156) Zebrafish DNA sequence from clone CH211-165F21 in... 52 0.12 1
(CU855909) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.12 1
(C23716) Dictyostelium discoideum gamete cDNA, clone FC-AB15. 52 0.12 1
(EC826193) SME00009501 esmbsro2 Sawyeria marylandensis cDNA,... 40 0.31 2
(AC217418) Pan troglodytes BAC clone CH251-672D8 from chromo... 48 1.9 1
(AC145988) Pan troglodytes BAC clone RP43-166E1 from chromos... 48 1.9 1
(AC073137) Homo sapiens BAC clone RP11-703P11 from 7, comple... 48 1.9 1
(AC027569) Homo sapiens chromosome 17 clone RP11-134J11 map ... 48 1.9 1
(CT025580) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 1.9 1
(AC206960) Zea mays chromosome 2 clone CH201-360H18; ZMMBBc0... 48 1.9 1
(DW131035) CLSX7673.b1_B24.ab1 CLS(XYZ) lettuce sativa Lactu... 48 1.9 1
(AU267877) Dictyostelium discoideum vegetative cDNA clone:VS... 48 1.9 1
(DT043362) Mdrtp1011E01.g1 Apple_EST_Mdrtp Malus x domestica... 48 1.9 1
(BW248505) Ciona intestinalis cDNA, clone:citb078a01, 5' end... 48 1.9 1
(AM263198) Listeria welshimeri serovar 6b str. SLCC5334 comp... 48 1.9 1
(AC017280) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 38 2.6 6
(AM808850) Nicotiana tabacum EST, clone nt005131046. 38 3.1 2
(BI503944) BB170031B20H05.5 Bee Brain Normalized/Subtracted ... 32 3.9 4
(EL577330) Physarum10497 Physarum polycephalum starvation st... 38 4.9 3
(BZ600628) WHACM55TR Human MCF7 breast cancer cell line libr... 36 5.0 3
(DU963343) 235896 Tomato MboI BAC Library Solanum lycopersic... 40 5.3 2
(AC157456) Rhinolophus ferrumequinum clone VMRC7-115C5, WORK... 40 6.9 6
(DR420462) gPGC_EST10304 Embryonic gonadal PGC cDNA Library ... 36 7.1 2
(AL669921) Mouse DNA sequence from clone RP23-67P9 on chromo... 46 7.4 1
(CR380949) Candida glabrata strain CBS138 chromosome C compl... 46 7.4 1
(AY646926) Candida glabrata epithelial adhesin 7 (EPA7) gene... 46 7.4 1
(BH552536) BOHCC63TF BOHC Brassica oleracea genomic clone BO... 46 7.4 1
(EJ772125) 1092970403799 Global-Ocean-Sampling_GS-30-02-01-1... 46 7.4 1
(EJ746122) 1092962061668 Global-Ocean-Sampling_GS-30-02-01-1... 46 7.4 1
(DY967430) CLSM18541.b1_J03.ab1 CLS(LMS) lettuce sativa Lact... 46 7.4 1
(DW072068) CLLZ3494.b2_K09.ab1 CLL(XYZ) lettuce saligna Lact... 46 7.4 1
(FG922228) UCRVU09_CCNT5191_g1 Cowpea UCR 707 Mixed Tissue a... 46 7.4 1
(FG922227) UCRVU09_CCNT5191_b1 Cowpea UCR 707 Mixed Tissue a... 46 7.4 1
(FG888642) UCRVU08_CCNS10308_g1 Cowpea IT97K-461-4 Mixed Tis... 46 7.4 1
(FG888641) UCRVU08_CCNS10308_b1 Cowpea IT97K-461-4 Mixed Tis... 46 7.4 1
(FG867991) UCRVU07_CCNP4902_g1 Cowpea UCR 779 Mixed Tissue a... 46 7.4 1
(FG842985) UCRVU05_CCNN5492_g1 Cowpea IT84S-2049 Mixed Tissu... 46 7.4 1
(FG842984) UCRVU05_CCNN5492_b1 Cowpea IT84S-2049 Mixed Tissu... 46 7.4 1
(FG821172) UCRVU04_CCNI6348_g1 Cowpea 524B Mixed Tissue and ... 46 7.4 1
(FG821171) UCRVU04_CCNI6348_b1 Cowpea 524B Mixed Tissue and ... 46 7.4 1
(FG815609) UCRVU04_CCNI3074_g1 Cowpea 524B Mixed Tissue and ... 46 7.4 1
(FG815608) UCRVU04_CCNI3074_b1 Cowpea 524B Mixed Tissue and ... 46 7.4 1
(FG808459) UCRVU04_CCNI10460_g1 Cowpea 524B Mixed Tissue and... 46 7.4 1
(FG808458) UCRVU04_CCNI10460_b1 Cowpea 524B Mixed Tissue and... 46 7.4 1
(FF555227) MOPFK04TF MOP Vigna unguiculata cDNA 5', mRNA seq... 46 7.4 1
(FF554429) MOPFW85TF MOP Vigna unguiculata cDNA 5', mRNA seq... 46 7.4 1
(FF390809) MOOBN60TF MOO Vigna unguiculata cDNA 5', mRNA seq... 46 7.4 1
(FF389318) MOOBP55TF MOO Vigna unguiculata cDNA 5', mRNA seq... 46 7.4 1
(FD689772) CBHY2434.fwd CBHY Mycosphaerella fijiensis MfEST5... 46 7.4 1
(FD689771) CBHY2434.rev CBHY Mycosphaerella fijiensis MfEST5... 46 7.4 1
(FD681956) CBHW747.rev CBHW Mycosphaerella fijiensis MfEST4 ... 46 7.4 1
(FD681900) CBHW717.rev CBHW Mycosphaerella fijiensis MfEST4 ... 46 7.4 1
(FD680197) CBHW396.rev CBHW Mycosphaerella fijiensis MfEST4 ... 46 7.4 1
(FD679925) CBHW3049.rev CBHW Mycosphaerella fijiensis MfEST4... 46 7.4 1
(FD505746) Pam01b_67_B04_C013.g1 Persea americana flower bud... 46 7.4 1
(CP000879) Petrotoga mobilis SJ95, complete genome. 46 7.4 1
(DB734007) Apis mellifera head cDNA, RIKEN full-length enric... 32 7.8 4
(BI516752) BB160023A20D09.5 Bee Brain Normalized Library, BB... 32 8.3 4
(AC018555) Homo sapiens chromosome 16 clone RP11-486F10, com... 42 9.9 7

>(L75794) Dictyostelium discoideum RasGTPase-activating protein gene,
complete cds.
Length = 2567

Score = 3598 bits (1815), Expect(2) = 0.0
Identities = 1823/1826 (99%)
Strand = Plus / Plus


Query: 342 tgaacaaagaagaatattcagatatttcagactctgaatcagaggaagttcatgaaacaa 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tgaacaaagaagaatattcagatatttcagactctgaatcagaggaagttcatgaaacaa 100


Query: 402 acaatcataatgaacacgaacacgaagaagaagatgacacaccagaaattgttgtaccag 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 acaatcataatgaacacgaacacgaagaagaagatgacacaccagaaattgttgtaccag 160


Query: 462 aacgtaaattcttaaaagaagatgaagattattcagttccattcccagtcatgcgtgaat 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aacgtaaattcttaaaagaagatgaagattattcagttccattcccagtcatgcgtgaat 220


Query: 522 gtttggtccttttgttgcaatcaagaagaatcttaagagatatgatgtattatagattca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtttggtccttttgttgcaatcaagaagaatcttaagagatatgatgtattatagattca 280


Query: 582 aaatggatagattcctttctggtaatctctctgtatttgaaattcaaaatctattacatt 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aaatggatagattcctttctggtaatctctctgtatttgaaattcaaaatctattacatt 340


Query: 642 cacaaagagaagataaagaatctgattggattgctgaaattcaagaattaaaacgtaatt 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cacaaagagaagataaagaatctgattggattgctgaaattcaagaattaaaacgtaatt 400


Query: 702 tagttagtgaagttagaagaaatcatacattagaaagagatcttaatcgtcttgataaga 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tagttagtgaagttagaagaaatcatacattagaaagagatcttaatcgtcttgataaga 460


Query: 762 gaattgcacttttaattaaaaatcgtggtaatattcaagatgtattagcagacaaagctg 821
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 461 gaattgcacttttaattaaaaatcgcggtaatattcaagatgtattagcagacaaagctg 520


Query: 822 gtcttaaagcaccaaaacataagggagatcaaaagaaaccagagcttattaatgatccaa 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtcttaaagcaccaaaacataagggagatcaaaagaaaccagagcttattaatgatccaa 580


Query: 882 agaaattagaagcctatcaaaatctcttttacttacttcaaacagaaccaaaatatttgg 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 agaaattagaagcctatcaaaatctcttttacttacttcaaacagaaccaaaatatttgg 640


Query: 942 caggtttggtttatttgattcaaccagagcaaatggagtccttcttgggtaccgtcatct 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 caggtttggtttatttgattcaaccagagcaaatggagtccttcttgggtaccgtcatct 700


Query: 1002 tgacattgtttggtgatgcattcacaccaagagaagagtttctcttactctctctctata 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tgacattgtttggtgatgcattcacaccaagagaagagtttctcttactctctctctata 760


Query: 1062 gactttcaattcaaaaggngatggcaaacattgcaaccgttggtgatttcctcaaggctg 1121
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gactttcaattcaaaaggagatggcaaacattgcaaccgttggtgatttcctcaaggctg 820


Query: 1122 acactgtcgttccaaagatgattatcacctacaacaaacgtaaacaaggtaccgactatt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 acactgtcgttccaaagatgattatcacctacaacaaacgtaaacaaggtaccgactatt 880


Query: 1182 tgaaggctgtcattggtccaatcttgtctaatgtcatcaaacaagagttgaatctcgagt 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tgaaggctgtcattggtccaatcttgtctaatgtcatcaaacaagagttgaatctcgagt 940


Query: 1242 tgaaaccaaatttagtctatgctgccatcatctctgaacaagagattagaaccggtgaaa 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tgaaaccaaatttagtctatgctgccatcatctctgaacaagagattagaaccggtgaaa 1000


Query: 1302 agagtacactcgatagaaatgtctcacatgagaaagctttagaagttccagaggttacca 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 agagtacactcgatagaaatgtctcacatgagaaagctttagaagttccagaggttacca 1060


Query: 1362 aaactatcaaggctcgtgtcgatcaattgatctccatttgtgaacaattcctcgatggta 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 aaactatcaaggctcgtgtcgatcaattgatctccatttgtgaacaattcctcgatggta 1120


Query: 1422 tcattagttcattgaatcgtcttccatatggtattcgttggatttgtaaacaaatctatc 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 tcattagttcattgaatcgtcttccatatggtattcgttggatttgtaaacaaatctatc 1180


Query: 1482 aaatcgctgaaaagaatttcaccaaatcaactcaagatgaaattctcaaggtcattggtt 1541
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1181 aaatcgctgaaaagaatttcaccaaatcaactcaagatgaaactctcaaggtcattggtt 1240


Query: 1542 actttatttactatcgtttcattcaagttgccatggtctctccagaggaatatgatttgg 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 actttatttactatcgtttcattcaagttgccatggtctctccagaggaatatgatttgg 1300


Query: 1602 tcggtcgtgaaattcatccaaccgcccgtaagaatttaatcaatgtatcaaaagtattac 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 tcggtcgtgaaattcatccaaccgcccgtaagaatttaatcaatgtatcaaaagtattac 1360


Query: 1662 aagcacttttcaattttgctcaatttggttcctctgaaaaacactttattcctttgaatg 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 aagcacttttcaattttgctcaatttggttcctctgaaaaacactttattcctttgaatg 1420


Query: 1722 gttggatcacctctcatatgggtgacattaaaaattatctccaagagatcattgaagtcg 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 gttggatcacctctcatatgggtgacattaaaaattatctccaagagatcattgaagtcg 1480


Query: 1782 gtgaaccagaagattatctccaagttgataaatatatggaactcactcaaaaaactaaac 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 gtgaaccagaagattatctccaagttgataaatatatggaactcactcaaaaaactaaac 1540


Query: 1842 cagtcattatcatctcccttccagagatttgtaatactcatcaactcatctcaaagaatt 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 cagtcattatcatctcccttccagagatttgtaatactcatcaactcatctcaaagaatt 1600


Query: 1902 tagattcactcgttgccaaaggtgaaaaggatgatccaatgagaatcattatgaaggaac 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 tagattcactcgttgccaaaggtgaaaaggatgatccaatgagaatcattatgaaggaac 1660


Query: 1962 tcgatgaatttggtccaccaccagatattgctgccgatgatgatcgtgaagttcaattga 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 tcgatgaatttggtccaccaccagatattgctgccgatgatgatcgtgaagttcaattga 1720


Query: 2022 ctctttccaataaattccaaaaaaccattgaagaggaattatcaccaggtgaaagtcttc 2081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 ctctttccaataaattccaaaaaaccattgaagaggaattatcaccaggtgaaagtcttc 1780


Query: 2082 tctctcaaaccaaagagatggtcatctctttacttcgtgctcttccaactcttccagaac 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 tctctcaaaccaaagagatggtcatctctttacttcgtgctcttccaactcttccagaac 1840


Query: 2142 aaaaagaccaatctgatgaaccaccc 2167
||||||||||||||||||||||||||
Sbjct: 1841 aaaaagaccaatctgatgaaccaccc 1866

Score = 1291 bits (651), Expect(2) = 0.0
Identities = 651/651 (100%)
Strand = Plus / Plus


Query: 2166 cccaatcttgtcgatgttttaaacaaggctcgtcaagctgatccatctttggagccagaa 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 cccaatcttgtcgatgttttaaacaaggctcgtcaagctgatccatctttggagccagaa 1923


Query: 2226 atcaaaaagatccttgataacctcaaaaaacttgaagaatataatctcaccacctctgcc 2285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 atcaaaaagatccttgataacctcaaaaaacttgaagaatataatctcaccacctctgcc 1983


Query: 2286 gataattattcctctttcctcaaggcagtcgcactcgaagtagttaatcgtgctgaaatt 2345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1984 gataattattcctctttcctcaaggcagtcgcactcgaagtagttaatcgtgctgaaatt 2043


Query: 2346 cgtgaacaacaaaagaaggagaaacaaagattaaccacctctttgaataatcttcgtaaa 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2044 cgtgaacaacaaaagaaggagaaacaaagattaaccacctctttgaataatcttcgtaaa 2103


Query: 2406 catcaaaaatatctcaacgaacaaatcgctcaatacaatcaatacctccaagattgtcgt 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2104 catcaaaaatatctcaacgaacaaatcgctcaatacaatcaatacctccaagattgtcgt 2163


Query: 2466 ctcaaacattatcaaaacaagagcaaaaagaagaagaagggagatggtgccaaagttggt 2525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2164 ctcaaacattatcaaaacaagagcaaaaagaagaagaagggagatggtgccaaagttggt 2223


Query: 2526 cctttcaaattcagtttcagcgaacttcacaagaaaggtgtcatcgtcgactctgaagtt 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2224 cctttcaaattcagtttcagcgaacttcacaagaaaggtgtcatcgtcgactctgaagtt 2283


Query: 2586 cctcaaatcaccagaaagaagattaaatttgtcattagctctgataccgttggtgtgttt 2645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2284 cctcaaatcaccagaaagaagattaaatttgtcattagctctgataccgttggtgtgttt 2343


Query: 2646 gatgtctctgctaaaatggctggtatcgatgttcaaactatgcgtttggaacttgatgac 2705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2344 gatgtctctgctaaaatggctggtatcgatgttcaaactatgcgtttggaacttgatgac 2403


Query: 2706 cttttagaactcaattcaattggcaccacaactttagaattagatcaaatcactttagat 2765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2404 cttttagaactcaattcaattggcaccacaactttagaattagatcaaatcactttagat 2463


Query: 2766 gttaatatgaccatacatttattaaacaaacttttcttatattagtcaact 2816
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2464 gttaatatgaccatacatttattaaacaaacttttcttatattagtcaact 2514

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 3,107,983,804
Number of extensions: 183505596
Number of successful extensions: 14743995
Number of sequences better than 10.0: 271
Length of query: 2882
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2857
Effective length of database: 96,311,147,814
Effective search space: 275160949304598
Effective search space used: 275160949304598
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15690-1 (Contig-U15690-1Q) /CSM_Contig/Contig-U15690-1Q.Seq.d
(2882 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

U81156_1(U81156|pid:none) Dictyostelium discoideum RasGAP1 (rgaA... 1103 0.0
BT072767_1(BT072767|pid:none) Salmo salar clone ssal-rgf-539-307... 265 1e-91
AY168005_1(AY168005|pid:none) Emericella nidulans Ras-GAP gene, ... 227 4e-76
BC150958_1(BC150958|pid:none) Mus musculus IQ motif containing G... 279 4e-73
AK142813_1(AK142813|pid:none) Mus musculus 15 days embryo head c... 279 4e-73
(Q3UQ44) RecName: Full=Ras GTPase-activating-like protein IQGAP2; 279 4e-73
AK302981_1(AK302981|pid:none) Homo sapiens cDNA FLJ52376 complet... 274 2e-71
AK303054_1(AK303054|pid:none) Homo sapiens cDNA FLJ50398 complet... 274 2e-71
(Q13576) RecName: Full=Ras GTPase-activating-like protein IQGAP2... 274 2e-71
AY351902_1(AY351902|pid:none) Homo sapiens testis specific IQ mo... 274 2e-71
CR382366_2(CR382366|pid:none) Zebrafish DNA sequence from clone ... 272 4e-71
AK302510_1(AK302510|pid:none) Homo sapiens cDNA FLJ51769 partial... 272 4e-71
AB093560_1(AB093560|pid:none) Xenopus laevis XIQGAP1 mRNA for IQ... 271 1e-70
AB093561_1(AB093561|pid:none) Xenopus laevis XIQGAP2 mRNA for IQ... 270 2e-70
AM270365_18(AM270365|pid:none) Aspergillus niger contig An16c013... 215 7e-70
AP007151_1071(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 214 2e-69
D29640_1(D29640|pid:none) Homo sapiens KIAA0051 mRNA, partial cds. 262 5e-68
(P46940) RecName: Full=Ras GTPase-activating-like protein IQGAP1... 262 5e-68
BC139731_1(BC139731|pid:none) Homo sapiens IQ motif containing G... 262 5e-68
BC169057_1(BC169057|pid:none) Rattus norvegicus IQ motif contain... 262 6e-68
AK129044_1(AK129044|pid:none) Mus musculus mRNA for mKIAA0051 pr... 261 1e-67
AK029631_1(AK029631|pid:none) Mus musculus adult male testis cDN... 261 1e-67
(P33277) RecName: Full=GTPase-activating protein; AltName: Full=... 226 9e-65
BC146242_1(BC146242|pid:none) Bos taurus IQ motif containing GTP... 248 9e-64
AB105103_1(AB105103|pid:none) Homo sapiens IQGAP3 mRNA, complete... 245 8e-63
BC131536_1(BC131536|pid:none) Homo sapiens IQ motif containing G... 245 8e-63
AK122653_1(AK122653|pid:none) Homo sapiens cDNA FLJ16086 fis, cl... 245 8e-63
(Q86VI3) RecName: Full=Ras GTPase-activating-like protein IQGAP3... 245 8e-63
BC151102_1(BC151102|pid:none) Mus musculus IQ motif containing G... 241 1e-61
BC156520_1(BC156520|pid:none) Synthetic construct Mus musculus c... 239 3e-61
AF139186_1(AF139186|pid:none) Hydra vulgaris IQGAP mRNA, partial... 238 1e-60
CU633901_222(CU633901|pid:none) Podospora anserina genomic DNA c... 222 7e-56
AM920427_1561(AM920427|pid:none) Penicillium chrysogenum Wiscons... 221 9e-56
CR382131_369(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 207 1e-51
AK077354_1(AK077354|pid:none) Mus musculus adult male pituitary ... 206 4e-51
AM920433_528(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 202 7e-50
CR382128_171(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 198 8e-49
(O14188) RecName: Full=Ras GTPase-activating-like protein rng2; ... 182 5e-44
AK042038_1(AK042038|pid:none) Mus musculus 3 days neonate thymus... 164 2e-38
AB179106_1(AB179106|pid:none) Macaca fascicularis testis cDNA cl... 163 3e-38
AE017342_259(AE017342|pid:none) Cryptococcus neoformans var. neo... 162 5e-38
FM992694_168(FM992694|pid:none) Candida dubliniensis CD36 chromo... 134 2e-29
AB076897_1(AB076897|pid:none) Ciona intestinalis Ci-IQGAP mRNA f... 130 4e-28
FN392319_895(FN392319|pid:none) Pichia pastoris GS115 chromosome... 124 2e-26
AE014297_4054(AE014297|pid:none) Drosophila melanogaster chromos... 86 8e-15
AE014297_4053(AE014297|pid:none) Drosophila melanogaster chromos... 86 8e-15
AE014297_4055(AE014297|pid:none) Drosophila melanogaster chromos... 86 8e-15
AK298000_1(AK298000|pid:none) Homo sapiens cDNA FLJ55816 complet... 86 1e-14
E87998(E87998)protein F09C3.1 [imported] - Caenorhabditis elegans 83 5e-14
AL670543_8(AL670543|pid:none) Neurospora crassa DNA linkage grou... 82 9e-14
CU638744_159(CU638744|pid:none) Podospora anserina genomic DNA c... 76 8e-12
CR382122_261(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 74 3e-11
AM270115_10(AM270115|pid:none) Aspergillus niger contig An06c009... 71 2e-10
M61213_1(M61213|pid:none) Human neurofibromatosis type 1 (NF1) m... 69 7e-10
M38107_1(M38107|pid:none) Human neurofibromatosis type 1 (NF-1) ... 69 7e-10
U17690_2(U17690|pid:none) Human neurofibromatosis 1 (NF1) gene, ... 69 7e-10
AB209336_1(AB209336|pid:none) Homo sapiens mRNA for neurofibromi... 69 7e-10
M60915_2(M60915|pid:none) Human neurofibromatosis protein type I... 69 7e-10
(P97526) RecName: Full=Neurofibromin; AltName: Full=Neurofibroma... 69 1e-09
AK033829_1(AK033829|pid:none) Mus musculus adult male epididymis... 67 3e-09
CR382137_522(CR382137|pid:none) Debaryomyces hansenii strain CBS... 67 4e-09
(P33314) RecName: Full=Inhibitory regulator protein BUD2/CLA2; A... 64 3e-08
X74130_2(X74130|pid:none) S.cerevisiae CLA2 gene. 64 3e-08
AC116956_58(AC116956|pid:none) Dictyostelium discoideum chromoso... 64 4e-08
DQ233254_1(DQ233254|pid:none) Homo sapiens Rab5-activating prote... 62 9e-08
CU928168_243(CU928168|pid:none) Kluyveromyces thermotolerans str... 62 9e-08
AL354710_10(AL354710|pid:none) Human DNA sequence from clone RP1... 62 2e-07
AK294542_1(AK294542|pid:none) Homo sapiens cDNA FLJ52111 complet... 62 2e-07
AB040954_1(AB040954|pid:none) Homo sapiens mRNA for KIAA1521 pro... 62 2e-07
(Q9P207) RecName: Full=GTPase-activating protein and VPS9 domain... 62 2e-07
AL354710_9(AL354710|pid:none) Human DNA sequence from clone RP11... 62 2e-07
AL354710_7(AL354710|pid:none) Human DNA sequence from clone RP11... 62 2e-07
CU928179_147(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 61 3e-07
U17690_1(U17690|pid:none) Human neurofibromatosis 1 (NF1) gene, ... 60 5e-07
CU633455_99(CU633455|pid:none) Podospora anserina genomic DNA ch... 60 5e-07
I78852(I78852;A48116;I52261) neurofibromatosis protein type 1 - ... 60 5e-07
(A5D794) RecName: Full=GTPase-activating protein and VPS9 domain... 60 6e-07
AK315928_1(AK315928|pid:none) Homo sapiens cDNA, FLJ78827 comple... 59 1e-06
X78937_1(X78937|pid:none) S.cerevisiae (S288C) IRA1, YBR1118 and... 59 1e-06
AL845262_9(AL845262|pid:none) Mouse DNA sequence from clone RP23... 59 1e-06
AK165047_1(AK165047|pid:none) Mus musculus 0 day neonate eyeball... 59 1e-06
AB011110_1(AB011110|pid:none) Homo sapiens mRNA for KIAA0538 pro... 59 1e-06
I54352(I54352;S11510) neurofibromin - mouse (fragment) &L10370_... 59 1e-06
AC105052_1(AC105052|pid:none) Homo sapiens BAC clone RP11-577H5 ... 59 1e-06
FN357416_37(FN357416|pid:none) Schistosoma mansoni genome sequen... 59 1e-06
AM920437_405(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 59 1e-06
BC048847_1(BC048847|pid:none) Mus musculus GTPase activating pro... 59 1e-06
AK150026_1(AK150026|pid:none) Mus musculus bone marrow macrophag... 59 1e-06
AJ276372_1(AJ276372|pid:none) Sparus aurata partial mRNA for Ras... 59 1e-06
CP000501_285(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 58 2e-06
AK296589_1(AK296589|pid:none) Homo sapiens cDNA FLJ50019 complet... 56 7e-06
(Q12280) RecName: Full=Ras GTPase-activating-like protein IQG1; ... 56 7e-06
Z46266_8(Z46266|pid:none) Caenorhabditis elegans Cosmid C07B5, c... 56 9e-06
D89610(D89610;A89610) ras GTPase-activating protein ZK899.8a - C... 56 9e-06
Z37979_6(Z37979|pid:none) Caenorhabditis elegans Cosmid T19C11, ... 56 9e-06
Z46266_10(Z46266|pid:none) Caenorhabditis elegans Cosmid C07B5, ... 56 9e-06
T19042(T19042;T24987) ras GTPase-activating protein ZK899.8b - C... 56 9e-06
CR382130_960(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 56 9e-06
T19046(T19046;T24991) ras GTPase-activating protein ZK899.8f - C... 56 9e-06
T19043(T19043;T19044;T24988;T24989;T00254;T37299;T37301;) ras GT... 56 9e-06
CR380956_447(CR380956|pid:none) Candida glabrata strain CBS138 c... 56 9e-06
(Q9UAI0) RecName: Full=Ras GTPase-activating protein gap-2; ... 56 9e-06
T19040(T19040) hypothetical protein ZK899.8g - Caenorhabditis el... 56 9e-06
AK290308_1(AK290308|pid:none) Homo sapiens cDNA FLJ77041 partial... 55 1e-05
AL035702_1(AL035702|pid:none) Human DNA sequence from clone RP4-... 55 1e-05
BC120902_1(BC120902|pid:none) Mus musculus RAS protein activator... 55 2e-05
BC110611_1(BC110611|pid:none) Homo sapiens RAS protein activator... 53 7e-05
BC021119_1(BC021119|pid:none) Homo sapiens GTPase activating pro... 52 1e-04
AL354710_11(AL354710|pid:none) Human DNA sequence from clone RP1... 52 1e-04
CU928174_242(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 52 2e-04
AK000126_1(AK000126|pid:none) Homo sapiens cDNA FLJ20119 fis, cl... 51 3e-04
M86655_1(M86655|pid:none) Drosophila melanogaster GTPase activat... 50 4e-04
CR380955_337(CR380955|pid:none) Candida glabrata strain CBS138 c... 50 4e-04
(P48423) RecName: Full=GTPase-activating protein; AltName: Full=... 50 4e-04
(Q9VZ08) RecName: Full=Receptor-mediated endocytosis protein 6 h... 50 4e-04
AX710523_1(AX710523|pid:none) Sequence 15 from Patent WO03018626. 50 6e-04
AE016818_371(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 50 6e-04
FM992688_1148(FM992688|pid:none) Candida dubliniensis CD36 chrom... 50 6e-04
AL845262_12(AL845262|pid:none) Mouse DNA sequence from clone RP2... 49 0.001
(P19158) RecName: Full=Inhibitory regulator protein IRA2; &RGBY... 49 0.001
M33779_1(M33779|pid:none) S.cerevisiae IRA2 protein gene, comple... 49 0.001
AK129381_1(AK129381|pid:none) Mus musculus premature mRNA for mK... 49 0.001
DQ334112_1(DQ334112|pid:none) Drosophila miranda CG1657 gene, pa... 49 0.001
AB046077_1(AB046077|pid:none) Macaca fascicularis brain cDNA, cl... 48 0.002
(Q29HW3) RecName: Full=Receptor-mediated endocytosis protein 6 h... 47 0.003
AE016815_232(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 47 0.003
BC020549_1(BC020549|pid:none) Homo sapiens IQ motif containing G... 47 0.004
BC052916_1(BC052916|pid:none) Mus musculus IQ motif containing G... 47 0.005
AL365274_3(AL365274|pid:none) Human DNA sequence from clone RP11... 46 0.007
AL365274_4(AL365274|pid:none) Human DNA sequence from clone RP11... 46 0.007
(Q5VWQ8) RecName: Full=Disabled homolog 2-interacting protein; ... 46 0.007
AE014298_2728(AE014298|pid:none) Drosophila melanogaster chromos... 46 0.009
BT059023_1(BT059023|pid:none) Salmo salar clone ssal-rgf-520-340... 45 0.012
BT055091_1(BT055091|pid:none) Zea mays full-length cDNA clone ZM... 45 0.015
AK134776_1(AK134776|pid:none) Mus musculus adult male medulla ob... 45 0.015
BX293980_181(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 45 0.015
(Q3UHC7) RecName: Full=Disabled homolog 2-interacting protein; ... 45 0.015
AL929076_3(AL929076|pid:none) Mouse DNA sequence from clone RP23... 45 0.015
AL929241_5(AL929241|pid:none) Mouse DNA sequence from clone RP23... 45 0.015
AL596139_2(AL596139|pid:none) BAC A of library A from Tetraodon ... 45 0.015
AY305656_1(AY305656|pid:none) Mus musculus DAB2IP (Dab2ip) mRNA,... 45 0.015
AK147593_1(AK147593|pid:none) Mus musculus adult male brain UNDE... 45 0.015
AL929241_7(AL929241|pid:none) Mouse DNA sequence from clone RP23... 45 0.015
AK122548_1(AK122548|pid:none) Mus musculus mRNA for mKIAA1743 pr... 45 0.015
AL662799_16(AL662799|pid:none) Human DNA sequence from clone XXb... 45 0.020
AL713634_1(AL713634|pid:none) Homo sapiens mRNA; cDNA DKFZp761G1... 45 0.020
(Q9QUH6) RecName: Full=Ras GTPase-activating protein SynGAP; Alt... 45 0.020
BC037685_1(BC037685|pid:none) Mus musculus IQ motif containing G... 45 0.020
AL662799_15(AL662799|pid:none) Human DNA sequence from clone XXb... 45 0.020
AL031187_1(AL031187|pid:none) Arabidopsis thaliana DNA chromosom... 45 0.020
AF048976_1(AF048976|pid:none) Rattus norvegicus synaptic ras GTP... 45 0.020
AB016962_1(AB016962|pid:none) Rattus norvegicus mRNA for synGAP-... 45 0.020
BC148357_1(BC148357|pid:none) Synthetic construct Homo sapiens c... 45 0.020
DQ473307_1(DQ473307|pid:none) Mus musculus disabled 2 interactin... 45 0.020
BC077377_1(BC077377|pid:none) Xenopus laevis hypothetical protei... 45 0.020
AF058790_1(AF058790|pid:none) Rattus norvegicus SynGAP-b mRNA, c... 45 0.020
AK175713_1(AK175713|pid:none) Arabidopsis thaliana mRNA for kine... 44 0.026
AX879556_1(AX879556|pid:none) Sequence 14461 from Patent EP10746... 44 0.026
AF367051_1(AF367051|pid:none) Homo sapiens DOC-2/DAB2 interactiv... 44 0.026
AF236130_1(AF236130|pid:none) Rattus norvegicus DOC2/DAB2 intera... 44 0.026
CR450800_1(CR450800|pid:none) Zebrafish DNA sequence from clone ... 44 0.034
(Q5HPA2) RecName: Full=Extracellular matrix-binding protein ebh;... 42 0.098
(Q8CP76) RecName: Full=Extracellular matrix-binding protein ebh;... 42 0.098
CP000029_988(CP000029|pid:none) Staphylococcus epidermidis RP62A... 42 0.098
FN357472_6(FN357472|pid:none) Schistosoma mansoni genome sequenc... 42 0.17
BC140572_1(BC140572|pid:none) Bos taurus RAS p21 protein activat... 42 0.17
AL929337_3(AL929337|pid:none) Zebrafish DNA sequence from clone ... 42 0.17
(Q28013) RecName: Full=Ras GTPase-activating protein 3; AltName:... 42 0.17
BX005265_2(BX005265|pid:none) Zebrafish DNA sequence from clone ... 42 0.17
AL929337_2(AL929337|pid:none) Zebrafish DNA sequence from clone ... 42 0.17
CR380959_436(CR380959|pid:none) Candida glabrata strain CBS138 c... 42 0.17
CP000497_212(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 40 0.37
D78155_1(D78155|pid:none) Homo sapiens mRNA for rasGTPase activa... 40 0.49
AC148405_25(AC148405|pid:none) Medicago truncatula clone mth2-37... 40 0.49
AK292016_1(AK292016|pid:none) Homo sapiens cDNA FLJ76675 complet... 40 0.49
AE014187_169(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.49
(Q9QYJ2) RecName: Full=Ras GTPase-activating protein 3; AltName:... 40 0.49
AK301015_1(AK301015|pid:none) Homo sapiens cDNA FLJ60904 complet... 40 0.49
D82880_1(D82880|pid:none) Human brain mRNA for human ras GTPase-... 40 0.49
(Q15283) RecName: Full=Ras GTPase-activating protein 2; AltName:... 40 0.49
CP001087_1431(CP001087|pid:none) Desulfobacterium autotrophicum ... 40 0.64
CP001080_384(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 40 0.64
CP000232_254(CP000232|pid:none) Moorella thermoacetica ATCC 3907... 40 0.64
CP000473_2183(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 39 1.4
FB882703_1(FB882703|pid:none) Sequence 101976 from Patent WO2008... 39 1.4
(Q60790) RecName: Full=Ras GTPase-activating protein 3; AltName:... 39 1.4
AK147896_1(AK147896|pid:none) Mus musculus melanocyte cDNA, RIKE... 39 1.4
CP001147_1005(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 38 1.8
CP001318_69(CP001318|pid:none) Borrelia garinii Far04 plasmid Fa... 38 2.4
CP000444_336(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 37 3.2
AP009608_890(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 37 3.2
(Q63713) RecName: Full=Ras GTPase-activating protein 2; AltName:... 37 3.2
AB024032_2(AB024032|pid:none) Arabidopsis thaliana genomic DNA, ... 37 3.2
AM263198_292(AM263198|pid:none) Listeria welshimeri serovar 6b s... 37 4.1
AM440046_1(AM440046|pid:none) Vitis vinifera contig VV78X271304.... 37 4.1
AJ576102_38(AJ576102|pid:none) Bacillus amyloliquefaciens partia... 37 4.1
CP001186_1543(CP001186|pid:none) Bacillus cereus G9842, complete... 31 5.3
AF063866_194(AF063866|pid:none) Melanoplus sanguinipes entomopox... 37 5.4
AJ786369_3(AJ786369|pid:none) Borrelia garinii lp54 plasmid, iso... 37 5.4
AE014297_762(AE014297|pid:none) Drosophila melanogaster chromoso... 37 5.4
L06487_1(L06487|pid:none) Saccharomyces cerevisiae ZIP1 protein ... 37 5.4
AE008691_499(AE008691|pid:none) Thermoanaerobacter tengcongensis... 36 7.0
AF083875_1(AF083875|pid:none) Streptococcus pyogenes strain CL37... 36 7.0
AM910983_84(AM910983|pid:none) Plasmodium knowlesi strain H chro... 36 7.0
AF401205_1(AF401205|pid:none) Homo sapiens IQGAP1 protein mRNA, ... 36 7.0
AC151823_16(AC151823|pid:none) Medicago truncatula clone mth2-45... 36 7.0
AE014186_35(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 36 9.2
AL132714_1(AL132714|pid:none) S.pombe chromosome I cosmid c11H11... 36 9.2
AM910991_160(AM910991|pid:none) Plasmodium knowlesi strain H chr... 36 9.2
AJ721105_1(AJ721105|pid:none) Gallus gallus mRNA for hypothetica... 36 9.2
AY099792_1(AY099792|pid:none) Arabidopsis thaliana MAP kinase, p... 36 9.2
DQ334158_1(DQ334158|pid:none) Drosophila miranda CG32560 gene, p... 36 9.2
AC034107_16(AC034107|pid:none) Sequence of BAC T10F20 from Arabi... 36 9.2
BT011114_1(BT011114|pid:none) Drosophila melanogaster LD17675 fu... 36 9.2
AP008934_272(AP008934|pid:none) Staphylococcus saprophyticus sub... 36 9.2
AE007869_353(AE007869|pid:none) Agrobacterium tumefaciens str. C... 36 9.2

>U81156_1(U81156|pid:none) Dictyostelium discoideum RasGAP1 (rgaA)
gene, complete cds.
Length = 822

Score = 1103 bits (2853), Expect = 0.0
Identities = 563/578 (97%), Positives = 563/578 (97%)
Frame = +2

Query: 434 DDTPEIVVPERKFLKEDEDYSVPFPVMRECLVLLLQSRRILRDMMYYRFKMDRFLSGNLS 613
DDTPEIVVPERKFLKEDEDYSVP PVMRECLVLLLQSRRILRDMMYYRFKMDRFLSGNLS
Sbjct: 32 DDTPEIVVPERKFLKEDEDYSVPIPVMRECLVLLLQSRRILRDMMYYRFKMDRFLSGNLS 91

Query: 614 VFEIQNLLHSQREDKESDWIAEIQELKRNLVSEVRRNHTLERDLNRLDKRIALLIKNRGN 793
VFEIQNLLHSQREDKESDWIAEIQELKRNLVSEVRRNHTLERDLNRLDKRIALLIKNRGN
Sbjct: 92 VFEIQNLLHSQREDKESDWIAEIQELKRNLVSEVRRNHTLERDLNRLDKRIALLIKNRGN 151

Query: 794 IQDVLADKAGLKAPKHKGDQKKPELINDPKKLEAYQNLFYLLQTEPKYLAGLVYLIQPEQ 973
IQDVLADKAGLKAPKHKGDQKKPELINDPKKLEAYQNLFYLLQTEPKYLAGLVYLIQPEQ
Sbjct: 152 IQDVLADKAGLKAPKHKGDQKKPELINDPKKLEAYQNLFYLLQTEPKYLAGLVYLIQPEQ 211

Query: 974 MESFLGTVILTLFGDAFTPREEFLLLSLYRLSIQKXMANIATVGDFLKADTVVPKMIITY 1153
MESFLGTVILTLFGDAFTPREEFLLLSLYRLSIQK MANIATVGDFLKADTVVPKMIITY
Sbjct: 212 MESFLGTVILTLFGDAFTPREEFLLLSLYRLSIQKEMANIATVGDFLKADTVVPKMIITY 271

Query: 1154 NKRKQGTDYLKAVIGPILSNVIKQELNLELKPNLVYAAIISEQEIRTGEKSTLDRNVSHE 1333
NKRKQGTDYLKAVIGPILSNVIKQELNLELKPNLVYAAIISEQEIRTGEKSTLDRNVSHE
Sbjct: 272 NKRKQGTDYLKAVIGPILSNVIKQELNLELKPNLVYAAIISEQEIRTGEKSTLDRNVSHE 331

Query: 1334 KALEVPEVTKTIKARVDQLISICEQFLDGIISSLNRLPYGIRWICKQIYQIAEKNFTKST 1513
KALEVPEVTKTIKARVDQLISICEQFLDGIISS NRLPYGIRWICKQIYQIAEKNFTKST
Sbjct: 332 KALEVPEVTKTIKARVDQLISICEQFLDGIISSWNRLPYGIRWICKQIYQIAEKNFTKST 391

Query: 1514 QDEILKVIGYFIYYRFIQVAMVSPEEYDLVGREIHPTARKNLINVSKVLQALFNFAQFGS 1693
QDEILKVIGYFIYYRFIQVAMVSPEEYDLVGREIHPTARKNLINVSKVLQALFNFAQFGS
Sbjct: 392 QDEILKVIGYFIYYRFIQVAMVSPEEYDLVGREIHPTARKNLINVSKVLQALFNFAQFGS 451

Query: 1694 SEKHFIPLNGWITSHMGDIKNYLQEIIEVGEPEDYLQVDKYMELTQKTKPVIIISLPEIC 1873
SEKHFIPLNGWITSHMGDIKNYLQEIIEVGEPEDYLQVDKYMELTQKTKPVIIISLPEIC
Sbjct: 452 SEKHFIPLNGWITSHMGDIKNYLQEIIEVGEPEDYLQVDKYMELTQKTKPVIIISLPEIC 511

Query: 1874 NTHQLISKNLDSLVAKGEKDDPMRIIMKELDEFGPPPDIAADDDREVQLTLSNKFQKTIX 2053
NTHQLISKNLDSLVAKGEKDDPMRIIMKELDEFGPPPDIAADDDREVQLTLSNKFQKTI
Sbjct: 512 NTHQLISKNLDSLVAKGEKDDPMRIIMKELDEFGPPPDIAADDDREVQLTLSNKFQKTIE 571

Query: 2054 XXXXXXXXXXXQTKEMVISLLRALPTLPEQKDQSDEPP 2167
QTKEMVISLLRALPTLPEQKDQSDEPP
Sbjct: 572 EELSPGESLLSQTKEMVISLLRALPTLPEQKDQSDEPP 609

Score = 371 bits (953), Expect = e-101
Identities = 195/214 (91%), Positives = 195/214 (91%)
Frame = +3

Query: 2166 PNLVDVLNKARQADPSLEPEIKKILDNLKKLEEYNLTTSADNYSSFLKAVALEVVNRAEI 2345
PNLVDVLNKARQADPSLEPEIKKILDNLKKLEEYNLTTSADNYSSFLKAVALEVVNRAEI
Sbjct: 609 PNLVDVLNKARQADPSLEPEIKKILDNLKKLEEYNLTTSADNYSSFLKAVALEVVNRAEI 668

Query: 2346 REQQKKEKQRLTTSLNNLRKHQKYLNEQIAQYNQYLQDCRLXXXXXXXXXXXXXXXXXXX 2525
REQQKKEKQRLTTSLNNLRKHQKYLNEQIAQYNQYLQDCRL
Sbjct: 669 REQQKKEKQRLTTSLNNLRKHQKYLNEQIAQYNQYLQDCRLKHYQNKSKKKKKGDGAKVG 728

Query: 2526 PFKFSFSELHKKGVIVDSEVPQITRKKIKFVISSDTVGVFDVSAKMAGIDVQTMRLELDD 2705
PFKFSFSELHKKGVIVDSEVPQITRKKIKFVISSDTVGVFDVSAKMAGIDVQTMRLELDD
Sbjct: 729 PFKFSFSELHKKGVIVDSEVPQITRKKIKFVISSDTVGVFDVSAKMAGIDVQTMRLELDD 788

Query: 2706 LLELNSIGTTTLELDQITLDVNMTIHLLNKLFLY 2807
LLELNSIGTTTLELDQITLDVNMTIHLLNKLFLY
Sbjct: 789 LLELNSIGTTTLELDQITLDVNMTIHLLNKLFLY 822

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 4,079,913,197
Number of extensions: 80257497
Number of successful extensions: 220572
Number of sequences better than 10.0: 216
Number of HSP's gapped: 220128
Number of HSP's successfully gapped: 259
Length of query: 960
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 822
Effective length of database: 604,535,722
Effective search space: 496928363484
Effective search space used: 496928363484
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.59 gvh: 0.62 alm: 0.14 top: 0.00 tms: 0.07 mit: 0.36 mip: 0.00
nuc: 0.59 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

20.0 %: cytoplasmic
20.0 %: nuclear
12.0 %: Golgi
12.0 %: endoplasmic reticulum
12.0 %: mitochondrial
8.0 %: vacuolar
4.0 %: extracellular, including cell wall
4.0 %: cytoskeletal
4.0 %: peroxisomal
4.0 %: vesicles of secretory system

>> prediction for Contig-U15690-1 is cyt

VS (DIR, S) 0
VH (FL, L) 10
VF (FL, S) 0
AH (FL, L) 52
AF (FL, S) 4
SL (DIR, L) 4
SS (DIR, S) 0
SH (FL, L) 30
SF (FL, S) 1
CH (FL, L) 31
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 2
FC-IC (SUB) 0