Contig-U15679-1
Contig ID Contig-U15679-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15679-1 (Contig-U15679-1Q) /CSM_Contig/Contig-U15679-1Q.Seq.d
AATTAACAAATTTTTTATTAAATTAAGTTAAAAATGGACTCATTGCTTAA
AATTCTAAACATAAAGTTTTTTTAAAAAAAAAATCAAAATAATAATCAAA
GACATGCACTTAAAACTGAAATTAAAACAGTTTTTAATTCAGATAGTGGT
GTTACTTATTTTTCAATTTTAATTGAAACATCATCAAAAATGTCATTGTA
TAATGTAATTATTAAGACATTTATTACTCAACTTCAAAAAGCTAATAGAG
AGTGTCAAATTCAAATCATTACCTATGGTGATAGTGTTAATACAATCTTT
GAATTTGATTCGGAACCAAATGAATTAAAAGATAGCTTAAAAGAAATTAA
ATTCTCTAAAGATAATGAAGAAGCAAAATTGGGTGAAGCAATGAGAATGT
GTTTCAATAATATCGAATCCAATTGGTCCAGTGATTTAATGTCAAAGATC
ATCATCATCAGTTCGGGTCAATCTACTGATGATTCAAGTGATGATTTAGT
TGATATCTTGAGTTTGGATAATAATAGTATCTATGGTTTGGCAGGCTGCA
ACCTAGCAAACAAATCATCCGATGAGGCTGTAAAAGATTTGCAATCACTT
TTACCAGACCAAAAAGTTATCCCATTGGGTAAGAATCCAAGCCAAGACAT
TAGATTGTTGATGAATGGTGGTGGTGGTGCTGCCAATGGTGGTGGTGCTG
CCAATGGCGCATCGTCCAGTGACGAACATTCAATTAATTGTCCAGTCAAT
ATTGAGGTTTATCCACACACAAATGAAACCAAATCGATTAAGGACGATTT
ACTATTGGATGTAGTAATTAAACCAGATGGTAACACAGCATCGGTACCAT
CAGGTACAAAGATTAAATTCTTATCAAACAAGTACTACTCTGGCTATACC
ATTCAATTGAAACAAAATTTAGTATTTGGTGAACCATATGAAGAGACTAT
TAAATTGGAGTTTAAAAAAGGTCAAATGAAAAAGACCCAATTTGAAAATT
TCCCTTCAAAAATCATTTTCCACATTGAACTCGCCAATGATAGAGACAAT
GTTCATGAGGGTTTCGTAGCTTTGAATATCTCTTACTTTTTAGGTGAATT
AAAATCAAAGTATAGATGTTGCATTGGTGTCGAGGGTGAGATTGGCAATG
GTAAAAGCACCTGCTTGAATGGTTTCGTCAATCTTTTCAACCCAGTCGGC
GAATTGGAAGAATACTTCAATGCAAATCGTACATCGGGCACTCATGTCAC
CACCAGCATCAACAATACATCACTCAAGGAGATCCTATCTGCAAAACATT
ACATTCATCCAGTTCAAGAGTCATTCCATGATATTGATATCGCTTGGTCC
GATTCTTGGGGTTTCGTCGATACCGATGTCCAATTGAGACATAAGGCCGA
GGGTAGAATTCATCATGGTGTCTCAAAGAATAATTGTATAGTTCAACAAC
CATTGGATCGTTATCGTGTCGATTGTTTTATTTTCGTTGTTTCCATTAGA
AGTTTCGGTGATAAAGATTCTATGGCAAAAATTGAAAAGAAAATTAGAGA
AGTTATTGATATGGGTATCACTCCTTTATTAGCTATTACTTTTGTTGATG
CTCTTTCTAAAAATCAATTTCAAGAACTCATTAGAACCAGAGGTGAATTA
TCAGTTCAAGAATCTAATACCTTTATCATCAATAACTATACTGAAAAGGA
AACTCATAGAGATATCTCTAAAGATATTCAATATCTTAGATTATTAACAA
AAGCTGTTCAATTATGTAAAATTTTAAAAGAAAAGCAAGCAATGAATAAA
TTAAAAGCTTTATCAATTGATGAAAATAATAATCCAACACCTGTTAAAAA
TCAACAACCATCATCATTTTTTGGTGAATGTTCTTCAACCTTCACTTCTC
CAAATAAATCGTTTCAAAGTCCAATGACTGGATCTCCAATGCAAACTCGT
CAATCTGAAACTCAACAACAACAACAACAACAACAGCAACAAATATCTTT
ACCAATTAATGTTACCGTTGATGTTGTACCAGATGCTCAAGGAACTATTT
TAACTTCATTCGAGATAGAAGCAAATCTTAATGAAACCATCTCTGAATTA
AAGAATAGATTAATCAATGAAATTGACTCCAATATTAATTCAAATGATTG
GAGCCTTACAAAAGAAAATGGTACAATTCTATTCGAGTCTGCTAAATTAC
TATTATTATCCTCTTCTTTTAAACCTTCTGAACAACCTGATTCCATTAAA
TTAGTATTAAAGAAGAAATTAAGATTATAAAATAATAATAATAATAATAA
TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA
ATAATAATAATAATAATAATAATAATAATAATAATAATCTCTATTATTTA
TTTTTTTAAATAGTTAATAAATTTAGTGAAATTTTCAAAAAAAAAAAAAA
AAAAAAAAAA----------CACTGTTGGCCTACTGGTTGGAAGAATACT
TCAATGCAAATCGTACATCGGGCACTCATGTCACCACCAGCATCAACAAT
ACATCACTCAAGGAGATCCTATCTGCAAAACATTACATTCATCCAGTTCA
AGAGTCATTCCATGATATTGATATCGCTTGGTCCGATTNTTGGGGTTTCG
TNGATACCGATGTCCAATTGAGACATAAGGCCGAGGGTAGAATTCATCAT
GGTACTAAAAAGGATGAATGCACCATCTTGCAACCAGACGACCGGTTATC
GTATCGACTGTTTCATCTTTGTCGTCTCCATTAGAAATTTCACCAATCCC
GCTTCAATGCAAAGAATTGAAAAGAAGATTAAAGAAGTACTCCAAATGAA
TATTACACCTTTATTGGCTATCACTTTCTCTGATACCCTCTCAAAGAATC
AACTTCAAGATGTAATGAAAAATAAAGTTGCCGAATTATCAGTTCAAGAG
TCAAATACCTTTATCATTAGTAATTACACTGAAAAAGAAACTCATAAAGA
TATCTCTAAAGATGTTCAATATCTTAGATTATTAACCAAAGCAGTTCAAT
TGTGTAAAGTTAAAAATGAAAAAGATATAATGAACAAAGTTAAAGGTATT
TCAAATTTATCAATTAATGATAATAATAATAGTTTTAATCAAACTCCAAT
TAAAAATCAACCTTTTTTTGAATCATCATCAACTTCTTCACCTTCACCAG
CTTTCTTTAGATCACCAATTCAACAACAACAACAACAAACCTCTACCACT
TCAACTCAATCACCATCACCATCATCTTCATCAGCATCAACACCACCACC
ACCATCACAAATGCTTAATGAACAACCAAGTAAAACTATCAATGTAACTA
TTGATGTAGTTACTGATTCAAGTGGTACCGTTTTAACTTCATTCGAAATT
GAATCTTCAACAAATGAATCTGTCTCTGAATTAAAATGTAAACTTATTAA
TGAAATTGATCCTGAAATGAATGCTAATGATTGGAGTATTACAAAAGAAT
CTGGTACAGTTTTATTCGAATCTGCAAGATTATCATCCATTATTAAATCT
TTTGATAATTCAGATTCCATTAAATTGGTTTTAAAGAAAAAACAAAAATT
ATTTTAAAAATTAACAAAACTAATAATAGTGGTAAAAAAATAAAAAAAAA
TAAAAAAATTAAAATAAATATAAAATAAAATAAATAAATAAAACCTTTTT
AAAATAAAATATCATTTTAATTAAGAACATTAAATAATTGTTTCTATTTT
AGAAAAAGAAAAAAAAANAAAAANAAAAAATAATAAACAAAAATAAGAAA
AATTA

Gap gap included
Contig length 3795
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 146
Number of EST 167
Link to clone list U15679
List of clone(s)

est1=CHE682F,1,577
est2=CHI279F,1,633
est3=VHM533F,1,545
est4=AHM223F,14,622
est5=SSK247F,28,685
est6=AHA234F,39,578
est7=SHE684F,46,648
est8=AHI541F,49,632
est9=AHA357F,57,671
est10=AHA131F,59,634
est11=AHE326F,81,607
est12=CHK873F,86,550
est13=AHH355F,98,620
est14=AHE569F,128,698
est15=CHN788F,141,747
est16=AHP568F,223,498
est17=AHL813F,247,914
est18=SFH269F,872,1493
est19=SSI430F,1326,1952
est20=AFA538Z,1447,2007
est21=AHM662Z,1609,2176
est22=AHQ803Z,1672,2231
est23=SSM610Z,1753,2460
est24=SSB795Z,1959,2439
est25=AHP732Z,1964,2280
est26=AHI420F,2191,2446
est27=SSI430Z,2209,2439
est28=AHI420Z,2250,2365
est29=CFC584F,2461,2763
est30=CHM446Z,2676,3287
est31=AHE237Z,2839,3484
est32=SLG481E,2846,3630
est33=AHA533Z,2856,3484
est34=AHH355Z,2856,3637
est35=AHI661Z,2856,3509
est36=SHG349Z,2856,3493
est37=CHI279Z,2857,3622
est38=AHB132Z,2878,3434
est39=AHJ389Z,2878,3211
est40=AHE750Z,2879,3484
est41=AHF803Z,2879,3486
est42=AHJ251Z,2879,3488
est43=AHK741Z,2879,3510
est44=AHQ448Z,2879,3532
est45=AHQ848Z,2879,3511
est46=AHR123Z,2879,3520
est47=CHO605Z,2879,3501
est48=AHD273Z,2880,3496
est49=AHE732Z,2880,3502
est50=AHF790Z,2880,3525
est51=AHI541Z,2880,3618
est52=AHJ138Z,2880,3519
est53=AHL840Z,2880,3484
est54=AHO686Z,2880,3484
est55=AHR118Z,2880,3486
est56=AHR345Z,2880,3484
est57=CHG896Z,2880,3486
est58=CHM287Z,2880,3490
est59=AHL472Z,2881,3519
est60=AHL813Z,2881,3666
est61=AHA234Z,2882,3674
est62=CHQ164Z,2882,3497
est63=AHE326Z,2885,3487
est64=AHL857Z,2886,3510
est65=SHA707Z,2889,3529
est66=CHO140Z,2894,3487
est67=CHF558Z,2895,3486
est68=CHP838Z,2897,3486
est69=AHH354Z,2900,3543
est70=AHF235Z,2901,3537
est71=AHO214Z,2905,3578
est72=AHE441Z,2906,3562
est73=CHM646Z,2907,3543
est74=AHC663Z,2908,3521
est75=CHH141Z,2915,3554
est76=SHE684Z,2915,3588
est77=CHO746Z,2918,3494
est78=AHA880Z,2919,3494
est79=AHO861Z,2922,3521
est80=AHD448Z,2924,3532
est81=AHM679Z,2924,3518
est82=CHH110Z,2925,3487
est83=AHL515Z,2927,3514
est84=VHM533Z,2929,3642
est85=CHN788Z,2931,3622
est86=CHO307Z,2937,3538
est87=AHO735Z,2950,3564
est88=AHD520Z,2951,3573
est89=CHP141Z,2955,3516
est90=AHK846Z,2957,3513
est91=CHQ473Z,2959,3486
est92=SHG881Z,2969,3482
est93=AHL674Z,2970,3513
est94=AHL356Z,2971,3491
est95=CHF803Z,2974,3523
est96=AHL627Z,2975,3522
est97=CHM566Z,2976,3553
est98=AHG642Z,2978,3520
est99=AHJ503Z,2978,3550
est100=SHA728Z,2978,3580
est101=AHA131Z,2979,3662
est102=SHJ511Z,2979,3569
est103=VHE629Z,2979,3492
est104=AHC467Z,2980,3526
est105=AHI887Z,2980,3557
est106=AHN730Z,2980,3521
est107=AHE525Z,2981,3483
est108=AHL663Z,2981,3497
est109=AHE569Z,2982,3701
est110=AHL324Z,2982,3562
est111=AHN348Z,2982,3561
est112=AHO113Z,2982,3380
est113=AHJ817Z,2983,3515
est114=VHK316Z,2998,3525
est115=CHH753Z,3002,3232
est116=CHE682Z,3003,3671
est117=AHC443Z,3012,3581
est118=AHF701Z,3012,3586
est119=AHE786Z,3014,3557
est120=AHG471Z,3015,3512
est121=AHQ737Z,3015,3558
est122=AHM101Z,3016,3533
est123=AHD224Z,3019,3384
est124=AHN466Z,3023,3499
est125=VHM388Z,3027,3504
est126=AHA106Z,3031,3578
est127=CHJ443Z,3032,3131
est128=AHN651Z,3039,3563
est129=AHA357Z,3043,3717
est130=AHI215Z,3053,3666
est131=CHF831Z,3054,3486
est132=AFL280Z,3057,3534
est133=AHB267Z,3057,3557
est134=AHP380Z,3060,3510
est135=AHP464Z,3062,3491
est136=AHG685Z,3064,3532
est137=AHP810Z,3066,3496
est138=AHG157Z,3087,3593
est139=CHM576Z,3090,3616
est140=CHN130Z,3099,3487
est141=CHP752Z,3117,3566
est142=SSK247Z,3118,3716
est143=AHM223Z,3145,3804
est144=AHP823Z,3156,3576
est145=AHP239Z,3161,3522
est146=CHK873Z,3163,3698
est147=AFN652Z,3167,3595
est148=AHP568Z,3186,3677
est149=CFI136Z,3212,3490
est150=SFI517Z,3213,3493
est151=CFH294Z,3214,3569
est152=AFJ425Z,3217,3558
est153=SFF255Z,3219,3479
est154=SFD393Z,3222,3548
est155=SFH269Z,3222,3613
est156=AFE150Z,3224,3702
est157=CFC584Z,3226,3701
est158=CHD241Z,3230,3565
est159=AFO123Z,3231,3499
est160=AFB818Z,3232,3604
est161=AFG386Z,3232,3485
est162=SFL488Z,3241,3558
est163=CHL811Z,3246,3408
est164=AHM208Z,3303,3479
est165=SSF677F,3364,3644
est166=AFO147Z,3393,3500
est167=SHB896Z,3436,3546
Translated Amino Acid sequence
n*qify*iklkmdsllkilnikff*kknqnnnqrhalkteiktvfnsdsgvtyfsiliet
sskmslynviiktfitqlqkanrecqiqiitygdsvntifefdsepnelkdslkeikfsk
dneeaklgeamrmcfnniesnwssdlmskiiiissgqstddssddlvdilsldnnsiygl
agcnlankssdeavkdlqsllpdqkviplgknpsqdirllmnggggaangggaangasss
dehsincpvnievyphtnetksikddllldvvikpdgntasvpsgtkikflsnkyysgyt
iqlkqnlvfgepyeetiklefkkgqmkktqfenfpskiifhielandrdnvhegfvalni
syflgelkskyrccigvegeigngkstclngfvnlfnpvgeleeyfnanrtsgthvttsi
nntslkeilsakhyihpvqesfhdidiawsdswgfvdtdvqlrhkaegrihhgvsknnci
vqqpldryrvdcfifvvsirsfgdkdsmakiekkirevidmgitpllaitfvdalsknqf
qelirtrgelsvqesntfiinnytekethrdiskdiqylrlltkavqlckilkekqamnk
lkalsidennnptpvknqqpssffgecsstftspnksfqspmtgspmqtrqsetqqqqqq
qqqqislpinvtvdvvpdaqgtiltsfeieanlnetiselknrlineidsninsndwslt
kengtilfesakllllsssfkpseqpdsiklvlkkklrl*nnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnlyylff*IVNKFSEIFKKKKKKKK---

---LLAYWLEEYFNANRTSGTHVTTSINNTSLKEILSAKHYIHPVQESFHDIDIAWSDXW
GFVDTDVQLRHKAEGRIHHGTKKDECTILQPDDRLSYRLFHLCRLH*kfhqsrfnakn*k
ed*rstpneyytfigyhfl*yplkestsrcnek*scriissrvkylyh**lh*krns*ry
l*rcsis*iinqsssiv*s*k*kryneqs*ryfkfin******f*snsn*kstff*iiin
fftftsfl*itnstttttnlyhfnsititiifisinttttitna**ttk*nyqcny*csy
*fkwyrfnfirn*ifnk*icl*ikm*ty**n*s*nec**leyykriwysfirickiiihy
*if**frfh*igfkektkiilkinktnnsgkkikknkkikinik*nk*ikpf*nkisf*l
rtlnncfyfrkrkkxkxkk**tkirki


Translated Amino Acid sequence (All Frames)
Frame A:
n*qify*iklkmdsllkilnikff*kknqnnnqrhalkteiktvfnsdsgvtyfsiliet
sskmslynviiktfitqlqkanrecqiqiitygdsvntifefdsepnelkdslkeikfsk
dneeaklgeamrmcfnniesnwssdlmskiiiissgqstddssddlvdilsldnnsiygl
agcnlankssdeavkdlqsllpdqkviplgknpsqdirllmnggggaangggaangasss
dehsincpvnievyphtnetksikddllldvvikpdgntasvpsgtkikflsnkyysgyt
iqlkqnlvfgepyeetiklefkkgqmkktqfenfpskiifhielandrdnvhegfvalni
syflgelkskyrccigvegeigngkstclngfvnlfnpvgeleeyfnanrtsgthvttsi
nntslkeilsakhyihpvqesfhdidiawsdswgfvdtdvqlrhkaegrihhgvsknnci
vqqpldryrvdcfifvvsirsfgdkdsmakiekkirevidmgitpllaitfvdalsknqf
qelirtrgelsvqesntfiinnytekethrdiskdiqylrlltkavqlckilkekqamnk
lkalsidennnptpvknqqpssffgecsstftspnksfqspmtgspmqtrqsetqqqqqq
qqqqislpinvtvdvvpdaqgtiltsfeieanlnetiselknrlineidsninsndwslt
kengtilfesakllllsssfkpseqpdsiklvlkkklrl*nnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnlyylff*IVNKFSEIFKKKKKKKK---

---hcwptgwkntsmqivhralmsppastihhsrrsylqnitfiqfkshsmilislgpix
gvsxipmsn*dirprvefimvlkrmnapscnqttgyridcfifvvsirnftnpasmqrie
kkikevlqmnitpllaitfsdtlsknqlqdvmknkvaelsvqesntfiisnytekethkd
iskdvqylrlltkavqlckvknekdimnkvkgisnlsindnnnsfnqtpiknqpffesss
tsspspaffrspiqqqqqqtsttstqspspssssastppppsqmlneqpsktinvtidvv
tdssgtvltsfeiesstnesvselkcklineidpemnandwsitkesgtvlfesarlssi
iksfdnsdsiklvlkkkqklf*kltkliivvkk*kkikklk*i*nkink*nlfkikyhfn
*eh*iivsilekekkxkxknnkqk*ekl

Frame B:
inkffikls*kwthclkf*t*sffkkkikiiikdmhlklklkqfliqivvllifqf*lkh
hqkchcim*llrhlllnfkkliesvkfkslpmvivliqslnlirnqmn*kia*kklnslk
imkkqnwvkq*ecvsiisnpigpvi*cqrssssvrvnllmiqvmi*lis*vwiiivsmvw
qaat*qtnhpmrl*kicnhfyqtkklshwvriqaktldc**mvvvvlpmvvvlpmahrpv
tniqlivqsilrfihtqmkpnrlrtiyywm**lnqmvtqhryhqvqrlnsyqtsttlaip
fn*nki*ylvnhmkrllnwslkkvk*krpnlkislqksfstlnspmietmfmrvs*l*is
ltf*vn*nqsidvalvsrvrlamvkapa*mvssifstqsanwkntsmqivhralmsppas
tihhsrrsylqnitfiqfkshsmilislgpilgvssipmsn*dirprvefimvsqriiv*
fnnhwivivsivlfslfplevsvikilwqklkrkleklliwvslly*lllllmlflkinf
knslepevnyqfknliplssitilkrklieislkifnildy*qklfnyvkf*kkskq*in
*klyqlmkiiiqhllkinnhhhflvnvlqpsllqinrfkvq*ldlqcklvnlklnnnnnn
nsnkylyqlmlplmlyqmlkelf*lhsr*kqilmkpsln*rid*smkltpiliqmigalq
kkmvqfyssllnyyyyplllnllnnlipln*y*rrn*dykiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiisiiyffk*linlvkfskkkkkkk---

---tvgllvgrilqcksyighschhqhqqyitqgdpicktlhssssrvip*y*yrlvrxl
gfrxyrcpiet*grg*nsswy*kg*mhhlatrrpvivstvsslsspleispiplqckelk
rrlkkysk*ilhlywlslslipsqrinfkm**kiklpnyqfksqiplslvitlkkkliki
slkmfnildy*pkqfncvklkmkki**tklkvfqiyqlmiiiivliklqlkinlflnhhq
llhlhqlsldhqfnnnnnkplplqlnhhhhhlhqhqhhhhhhkclmnnqvklsm*llm*l
liqvvpf*lhsklnlqqmnlsln*nvnllmklilk*mlmigvlqknlvqfysnlqdyhpl
lnlliiqiplnwf*rknknyfkn*qn***w*knkkk*kn*nkykik*inktflk*niili
knik*lflf*kkkkkxkxkiinknkkn

Frame C:
ltnflln*vknglia*nskhkvflkkksk**sktct*n*n*nsf*fr*wcylffnfn*ni
iknviv*cny*diyystsks**rvsnsnhylw**c*ynl*i*fgtk*ikr*lkrn*il*r
**rskig*snenvfq*yriqlvq*fnvkdhhhqfgsiy**fk**fs*ylefg***ylwfg
rlqpskqiir*gckrfaitftrpksypig*eskprh*ivdewwwwccqwwwccqwrivq*
rtfn*lssqy*glsthk*nqid*grftigcsn*trw*hsigtirykd*ilikqvllwlyh
sietkfsiw*ti*rdy*igv*krsnekdpi*kfpfknhfph*trq**rqcs*gfrsfeyl
llfr*ikikv*mlhwcrg*dwqw*khllewfrqsfqpsrrigrilqcksyighschhqhq
qyitqgdpicktlhssssrvip*y*yrlvrflgfrryrcpiet*grg*nsswclke*lys
sttigslscrlfyfrcfh*kfr**rfygkn*ken*rsy*ygyhsfisyyfc*csf*ksis
rth*nqr*iissri*ylyhq*ly*kgns*ryl*rysis*iinkscsim*nfkrkasne*i
ksfin**k**sntc*ksttiiifw*mffnlhfsk*ivsksndwisnanssi*nstttttt
tatniftn*cyr*cctrcsrnyfnfirdrsks**nhl*ike*inq*n*lqy*fk*lepyk
rkwynsirvc*itiiilff*tf*tt*fh*isikeeikiik********************
***************sllfiflns**i**nfqkkkkkkk---

---LLAYWLEEYFNANRTSGTHVTTSINNTSLKEILSAKHYIHPVQESFHDIDIAWSDXW
GFVDTDVQLRHKAEGRIHHGTKKDECTILQPDDRLSYRLFHLCRLH*kfhqsrfnakn*k
ed*rstpneyytfigyhfl*yplkestsrcnek*scriissrvkylyh**lh*krns*ry
l*rcsis*iinqsssiv*s*k*kryneqs*ryfkfin******f*snsn*kstff*iiin
fftftsfl*itnstttttnlyhfnsititiifisinttttitna**ttk*nyqcny*csy
*fkwyrfnfirn*ifnk*icl*ikm*ty**n*s*nec**leyykriwysfirickiiihy
*if**frfh*igfkektkiilkinktnnsgkkikknkkikinik*nk*ikpf*nkisf*l
rtlnncfyfrkrkkxkxkk**tkirki

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15679-1 (Contig-U15679-1Q)
/CSM_Contig/Contig-U15679-1Q.Seq.d
(3805 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15679-1 (Contig-U15679-1Q) /CSM_Contig/Conti... 2508 0.0
Contig-U14367-1 (Contig-U14367-1Q) /CSM_Contig/Conti... 488 e-137
Contig-U13902-1 (Contig-U13902-1Q) /CSM_Contig/Conti... 153 2e-36
Contig-U16437-1 (Contig-U16437-1Q) /CSM_Contig/Conti... 52 7e-06
Contig-U07029-1 (Contig-U07029-1Q) /CSM_Contig/Conti... 44 0.002
Contig-U05524-1 (Contig-U05524-1Q) /CSM_Contig/Conti... 44 0.002
Contig-U14875-1 (Contig-U14875-1Q) /CSM_Contig/Conti... 42 0.006
Contig-U14181-1 (Contig-U14181-1Q) /CSM_Contig/Conti... 42 0.006
Contig-U11039-1 (Contig-U11039-1Q) /CSM_Contig/Conti... 42 0.006
Contig-U09738-1 (Contig-U09738-1Q) /CSM_Contig/Conti... 42 0.006

>Contig-U15679-1 (Contig-U15679-1Q) /CSM_Contig/Contig-U15679-1Q.Seq.d
Length = 3805

Score = 2508 bits (1265), Expect = 0.0
Identities = 1265/1265 (100%)
Strand = Plus / Plus


Query: 698 ctgccaatggcgcatcgtccagtgacgaacattcaattaattgtccagtcaatattgagg 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ctgccaatggcgcatcgtccagtgacgaacattcaattaattgtccagtcaatattgagg 757


Query: 758 tttatccacacacaaatgaaaccaaatcgattaaggacgatttactattggatgtagtaa 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tttatccacacacaaatgaaaccaaatcgattaaggacgatttactattggatgtagtaa 817


Query: 818 ttaaaccagatggtaacacagcatcggtaccatcaggtacaaagattaaattcttatcaa 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ttaaaccagatggtaacacagcatcggtaccatcaggtacaaagattaaattcttatcaa 877


Query: 878 acaagtactactctggctataccattcaattgaaacaaaatttagtatttggtgaaccat 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 acaagtactactctggctataccattcaattgaaacaaaatttagtatttggtgaaccat 937


Query: 938 atgaagagactattaaattggagtttaaaaaaggtcaaatgaaaaagacccaatttgaaa 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 atgaagagactattaaattggagtttaaaaaaggtcaaatgaaaaagacccaatttgaaa 997


Query: 998 atttcccttcaaaaatcattttccacattgaactcgccaatgatagagacaatgttcatg 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 atttcccttcaaaaatcattttccacattgaactcgccaatgatagagacaatgttcatg 1057


Query: 1058 agggtttcgtagctttgaatatctcttactttttaggtgaattaaaatcaaagtatagat 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 agggtttcgtagctttgaatatctcttactttttaggtgaattaaaatcaaagtatagat 1117


Query: 1118 gttgcattggtgtcgagggtgagattggcaatggtaaaagcacctgcttgaatggtttcg 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 gttgcattggtgtcgagggtgagattggcaatggtaaaagcacctgcttgaatggtttcg 1177


Query: 1178 tcaatcttttcaacccagtcggcgaattggaagaatacttcaatgcaaatcgtacatcgg 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 tcaatcttttcaacccagtcggcgaattggaagaatacttcaatgcaaatcgtacatcgg 1237


Query: 1238 gcactcatgtcaccaccagcatcaacaatacatcactcaaggagatcctatctgcaaaac 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 gcactcatgtcaccaccagcatcaacaatacatcactcaaggagatcctatctgcaaaac 1297


Query: 1298 attacattcatccagttcaagagtcattccatgatattgatatcgcttggtccgattctt 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 attacattcatccagttcaagagtcattccatgatattgatatcgcttggtccgattctt 1357


Query: 1358 ggggtttcgtcgataccgatgtccaattgagacataaggccgagggtagaattcatcatg 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 ggggtttcgtcgataccgatgtccaattgagacataaggccgagggtagaattcatcatg 1417


Query: 1418 gtgtctcaaagaataattgtatagttcaacaaccattggatcgttatcgtgtcgattgtt 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1418 gtgtctcaaagaataattgtatagttcaacaaccattggatcgttatcgtgtcgattgtt 1477


Query: 1478 ttattttcgttgtttccattagaagtttcggtgataaagattctatggcaaaaattgaaa 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 ttattttcgttgtttccattagaagtttcggtgataaagattctatggcaaaaattgaaa 1537


Query: 1538 agaaaattagagaagttattgatatgggtatcactcctttattagctattacttttgttg 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 agaaaattagagaagttattgatatgggtatcactcctttattagctattacttttgttg 1597


Query: 1598 atgctctttctaaaaatcaatttcaagaactcattagaaccagaggtgaattatcagttc 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 atgctctttctaaaaatcaatttcaagaactcattagaaccagaggtgaattatcagttc 1657


Query: 1658 aagaatctaatacctttatcatcaataactatactgaaaaggaaactcatagagatatct 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1658 aagaatctaatacctttatcatcaataactatactgaaaaggaaactcatagagatatct 1717


Query: 1718 ctaaagatattcaatatcttagattattaacaaaagctgttcaattatgtaaaattttaa 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1718 ctaaagatattcaatatcttagattattaacaaaagctgttcaattatgtaaaattttaa 1777


Query: 1778 aagaaaagcaagcaatgaataaattaaaagctttatcaattgatgaaaataataatccaa 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 aagaaaagcaagcaatgaataaattaaaagctttatcaattgatgaaaataataatccaa 1837


Query: 1838 cacctgttaaaaatcaacaaccatcatcattttttggtgaatgttcttcaaccttcactt 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1838 cacctgttaaaaatcaacaaccatcatcattttttggtgaatgttcttcaaccttcactt 1897


Query: 1898 ctccaaataaatcgtttcaaagtccaatgactggatctccaatgcaaactcgtcaatctg 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 ctccaaataaatcgtttcaaagtccaatgactggatctccaatgcaaactcgtcaatctg 1957


Query: 1958 aaact 1962
|||||
Sbjct: 1958 aaact 1962


Score = 1433 bits (723), Expect = 0.0
Identities = 743/750 (99%)
Strand = Plus / Plus


Query: 2471 cactgttggcctactggttggaagaatacttcaatgcaaatcgtacatcgggcactcatg 2530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2471 cactgttggcctactggttggaagaatacttcaatgcaaatcgtacatcgggcactcatg 2530


Query: 2531 tcaccaccagcatcaacaatacatcactcaaggagatcctatctgcaaaacattacattc 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2531 tcaccaccagcatcaacaatacatcactcaaggagatcctatctgcaaaacattacattc 2590


Query: 2591 atccagttcaagagtcattccatgatattgatatcgcttggtccgattnttggggtttcg 2650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2591 atccagttcaagagtcattccatgatattgatatcgcttggtccgattnttggggtttcg 2650


Query: 2651 tngataccgatgtccaattgagacataaggccgagggtagaattcatcatggtactaaaa 2710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2651 tngataccgatgtccaattgagacataaggccgagggtagaattcatcatggtactaaaa 2710


Query: 2711 aggatgaatgcaccatcttgcaaccagacgaccggttatcgtatcgactgtttcatcttt 2770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2711 aggatgaatgcaccatcttgcaaccagacgaccggttatcgtatcgactgtttcatcttt 2770


Query: 2771 gtcgtctccattagaaatttcaccaatcccgcttcaatgcaaagaattgaaaagaagatt 2830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2771 gtcgtctccattagaaatttcaccaatcccgcttcaatgcaaagaattgaaaagaagatt 2830


Query: 2831 aaagaagtactccaaatgaatattacacctttattggctatcactttctctgataccctc 2890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 aaagaagtactccaaatgaatattacacctttattggctatcactttctctgataccctc 2890


Query: 2891 tcaaagaatcaacttcaagatgtaatgaaaaataaagttgccgaattatcagttcaagag 2950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2891 tcaaagaatcaacttcaagatgtaatgaaaaataaagttgccgaattatcagttcaagag 2950


Query: 2951 tcaaatacctttatcattagtaattacactgaaaaagaaactcataaagatatctctaaa 3010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2951 tcaaatacctttatcattagtaattacactgaaaaagaaactcataaagatatctctaaa 3010


Query: 3011 gatgttcaatatcttagattattaaccaaagcagttcaattgtgtaaagttaaaaatgaa 3070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3011 gatgttcaatatcttagattattaaccaaagcagttcaattgtgtaaagttaaaaatgaa 3070


Query: 3071 aaagatataatgaacaaagttaaaggtatttcaaatttatcaattaatgataataataat 3130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3071 aaagatataatgaacaaagttaaaggtatttcaaatttatcaattaatgataataataat 3130


Query: 3131 agttttaatcaaactccaattaaaaatcaaccnnnnnnngaatcatcatcaacttcttca 3190
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3131 agttttaatcaaactccaattaaaaatcaacctttttttgaatcatcatcaacttcttca 3190


Query: 3191 ccttcaccagctttctttagatcaccaatt 3220
||||||||||||||||||||||||||||||
Sbjct: 3191 ccttcaccagctttctttagatcaccaatt 3220


Score = 1259 bits (635), Expect = 0.0
Identities = 655/665 (98%)
Strand = Plus / Plus


Query: 1 aattaacaaattttttattaaattaagttaaaaatggactcattgcttaaaattctaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattaacaaattttttattaaattaagttaaaaatggactcattgcttaaaattctaaac 60


Query: 61 ataaagtttttttnnnnnnnnnntcaaaataataatcaaagacatgcacttaaaactgaa 120
||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaagtttttttaaaaaaaaaatcaaaataataatcaaagacatgcacttaaaactgaa 120


Query: 121 attaaaacagtttttaattcagatagtggtgttacttatttttcaattttaattgaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaaaacagtttttaattcagatagtggtgttacttatttttcaattttaattgaaaca 180


Query: 181 tcatcaaaaatgtcattgtataatgtaattattaagacatttattactcaacttcaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcatcaaaaatgtcattgtataatgtaattattaagacatttattactcaacttcaaaaa 240


Query: 241 gctaatagagagtgtcaaattcaaatcattacctatggtgatagtgttaatacaatcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctaatagagagtgtcaaattcaaatcattacctatggtgatagtgttaatacaatcttt 300


Query: 301 gaatttgattcggaaccaaatgaattaaaagatagcttaaaagaaattaaattctctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaatttgattcggaaccaaatgaattaaaagatagcttaaaagaaattaaattctctaaa 360


Query: 361 gataatgaagaagcaaaattgggtgaagcaatgagaatgtgtttcaataatatcgaatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gataatgaagaagcaaaattgggtgaagcaatgagaatgtgtttcaataatatcgaatcc 420


Query: 421 aattggtccagtgatttaatgtcaaagatcatcatcatcagttcgggtcaatctactgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aattggtccagtgatttaatgtcaaagatcatcatcatcagttcgggtcaatctactgat 480


Query: 481 gattcaagtgatgatttagttgatatcttgagtttggataataatagtatctatggtttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattcaagtgatgatttagttgatatcttgagtttggataataatagtatctatggtttg 540


Query: 541 gcaggctgcaacctagcaaacaaatcatccgatgaggctgtaaaagatttgcaatcactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcaggctgcaacctagcaaacaaatcatccgatgaggctgtaaaagatttgcaatcactt 600


Query: 601 ttaccagaccaaaaagttatcccattgggtaagaatccaagccaagacattagattgttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttaccagaccaaaaagttatcccattgggtaagaatccaagccaagacattagattgttg 660


Query: 661 atgaa 665
|||||
Sbjct: 661 atgaa 665


Score = 563 bits (284), Expect = e-160
Identities = 284/284 (100%)
Strand = Plus / Plus


Query: 1993 atatctttaccaattaatgttaccgttgatgttgtaccagatgctcaaggaactatttta 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1993 atatctttaccaattaatgttaccgttgatgttgtaccagatgctcaaggaactatttta 2052


Query: 2053 acttcattcgagatagaagcaaatcttaatgaaaccatctctgaattaaagaatagatta 2112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2053 acttcattcgagatagaagcaaatcttaatgaaaccatctctgaattaaagaatagatta 2112


Query: 2113 atcaatgaaattgactccaatattaattcaaatgattggagccttacaaaagaaaatggt 2172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2113 atcaatgaaattgactccaatattaattcaaatgattggagccttacaaaagaaaatggt 2172


Query: 2173 acaattctattcgagtctgctaaattactattattatcctcttcttttaaaccttctgaa 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2173 acaattctattcgagtctgctaaattactattattatcctcttcttttaaaccttctgaa 2232


Query: 2233 caacctgattccattaaattagtattaaagaagaaattaagatt 2276
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2233 caacctgattccattaaattagtattaaagaagaaattaagatt 2276


Score = 537 bits (271), Expect = e-152
Identities = 271/271 (100%)
Strand = Plus / Plus


Query: 3309 aaatgcttaatgaacaaccaagtaaaactatcaatgtaactattgatgtagttactgatt 3368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3309 aaatgcttaatgaacaaccaagtaaaactatcaatgtaactattgatgtagttactgatt 3368


Query: 3369 caagtggtaccgttttaacttcattcgaaattgaatcttcaacaaatgaatctgtctctg 3428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3369 caagtggtaccgttttaacttcattcgaaattgaatcttcaacaaatgaatctgtctctg 3428


Query: 3429 aattaaaatgtaaacttattaatgaaattgatcctgaaatgaatgctaatgattggagta 3488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429 aattaaaatgtaaacttattaatgaaattgatcctgaaatgaatgctaatgattggagta 3488


Query: 3489 ttacaaaagaatctggtacagttttattcgaatctgcaagattatcatccattattaaat 3548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3489 ttacaaaagaatctggtacagttttattcgaatctgcaagattatcatccattattaaat 3548


Query: 3549 cttttgataattcagattccattaaattggt 3579
|||||||||||||||||||||||||||||||
Sbjct: 3549 cttttgataattcagattccattaaattggt 3579


Score = 416 bits (210), Expect = e-115
Identities = 214/216 (99%)
Strand = Plus / Plus


Query: 1204 ttggaagaatacttcaatgcaaatcgtacatcgggcactcatgtcaccaccagcatcaac 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 ttggaagaatacttcaatgcaaatcgtacatcgggcactcatgtcaccaccagcatcaac 2547


Query: 1264 aatacatcactcaaggagatcctatctgcaaaacattacattcatccagttcaagagtca 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 aatacatcactcaaggagatcctatctgcaaaacattacattcatccagttcaagagtca 2607


Query: 1324 ttccatgatattgatatcgcttggtccgattcttggggtttcgtcgataccgatgtccaa 1383
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 2608 ttccatgatattgatatcgcttggtccgattnttggggtttcgtngataccgatgtccaa 2667


Query: 1384 ttgagacataaggccgagggtagaattcatcatggt 1419
||||||||||||||||||||||||||||||||||||
Sbjct: 2668 ttgagacataaggccgagggtagaattcatcatggt 2703


Score = 416 bits (210), Expect = e-115
Identities = 214/216 (99%)
Strand = Plus / Plus


Query: 2488 ttggaagaatacttcaatgcaaatcgtacatcgggcactcatgtcaccaccagcatcaac 2547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 ttggaagaatacttcaatgcaaatcgtacatcgggcactcatgtcaccaccagcatcaac 1263


Query: 2548 aatacatcactcaaggagatcctatctgcaaaacattacattcatccagttcaagagtca 2607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 aatacatcactcaaggagatcctatctgcaaaacattacattcatccagttcaagagtca 1323


Query: 2608 ttccatgatattgatatcgcttggtccgattnttggggtttcgtngataccgatgtccaa 2667
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 1324 ttccatgatattgatatcgcttggtccgattcttggggtttcgtcgataccgatgtccaa 1383


Query: 2668 ttgagacataaggccgagggtagaattcatcatggt 2703
||||||||||||||||||||||||||||||||||||
Sbjct: 1384 ttgagacataaggccgagggtagaattcatcatggt 1419


Score = 155 bits (78), Expect = 6e-37
Identities = 114/126 (90%)
Strand = Plus / Plus


Query: 1645 gaattatcagttcaagaatctaatacctttatcatcaataactatactgaaaaggaaact 1704
||||||||||||||||| || |||||||||||||| | ||| || |||||||| ||||||
Sbjct: 2933 gaattatcagttcaagagtcaaatacctttatcattagtaattacactgaaaaagaaact 2992


Query: 1705 catagagatatctctaaagatattcaatatcttagattattaacaaaagctgttcaatta 1764
|||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 2993 cataaagatatctctaaagatgttcaatatcttagattattaaccaaagcagttcaattg 3052


Query: 1765 tgtaaa 1770
||||||
Sbjct: 3053 tgtaaa 3058


Score = 155 bits (78), Expect = 6e-37
Identities = 114/126 (90%)
Strand = Plus / Plus


Query: 2933 gaattatcagttcaagagtcaaatacctttatcattagtaattacactgaaaaagaaact 2992
||||||||||||||||| || |||||||||||||| | ||| || |||||||| ||||||
Sbjct: 1645 gaattatcagttcaagaatctaatacctttatcatcaataactatactgaaaaggaaact 1704


Query: 2993 cataaagatatctctaaagatgttcaatatcttagattattaaccaaagcagttcaattg 3052
|||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 1705 catagagatatctctaaagatattcaatatcttagattattaacaaaagctgttcaatta 1764


Query: 3053 tgtaaa 3058
||||||
Sbjct: 1765 tgtaaa 1770


Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 2408 aaatagttaataaatttagtgaaattttc 2436
|||||||||||||||||||||||||||||
Sbjct: 2408 aaatagttaataaatttagtgaaattttc 2436


Score = 50.1 bits (25), Expect = 3e-05
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 3781 taataaacaaaaataagaaaaatta 3805
|||||||||||||||||||||||||
Sbjct: 3781 taataaacaaaaataagaaaaatta 3805


Score = 44.1 bits (22), Expect = 0.002
Identities = 43/50 (86%)
Strand = Plus / Plus


Query: 3476 aatgattggagtattacaaaagaatctggtacagttttattcgaatctgc 3525
||||||||||| ||||||||||| ||||||| || ||||||| |||||
Sbjct: 2143 aatgattggagccttacaaaagaaaatggtacaattctattcgagtctgc 2192


Score = 44.1 bits (22), Expect = 0.002
Identities = 43/50 (86%)
Strand = Plus / Plus


Query: 2143 aatgattggagccttacaaaagaaaatggtacaattctattcgagtctgc 2192
||||||||||| ||||||||||| ||||||| || ||||||| |||||
Sbjct: 3476 aatgattggagtattacaaaagaatctggtacagttttattcgaatctgc 3525


Score = 42.1 bits (21), Expect = 0.006
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 3239 acctctaccacttcaactcaa 3259
|||||||||||||||||||||
Sbjct: 3239 acctctaccacttcaactcaa 3259


Score = 36.2 bits (18), Expect = 0.39
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 2239 gattccattaaattagtattaaagaa 2264
|||||||||||||| || ||||||||
Sbjct: 3563 gattccattaaattggttttaaagaa 3588


Score = 32.2 bits (16), Expect = 6.0
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 3381 ttttaacttcattcga 3396
||||||||||||||||
Sbjct: 2048 ttttaacttcattcga 2063


Score = 32.2 bits (16), Expect = 6.0
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 1530 aattgaaaagaaaattagagaagt 1553
|||||||||||| |||| ||||||
Sbjct: 2815 aattgaaaagaagattaaagaagt 2838


Score = 32.2 bits (16), Expect = 6.0
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 2048 ttttaacttcattcga 2063
||||||||||||||||
Sbjct: 3381 ttttaacttcattcga 3396


Score = 32.2 bits (16), Expect = 6.0
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 2815 aattgaaaagaagattaaagaagt 2838
|||||||||||| |||| ||||||
Sbjct: 1530 aattgaaaagaaaattagagaagt 1553


>Contig-U14367-1 (Contig-U14367-1Q) /CSM_Contig/Contig-U14367-1Q.Seq.d
Length = 496

Score = 488 bits (246), Expect = e-137
Identities = 253/254 (99%), Gaps = 1/254 (0%)
Strand = Plus / Plus


Query: 2653 gataccgatgtccaattgagacataaggccgagggtagaattcatcatggtactaaaaag 2712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gataccgatgtccaattgagacataaggccgagggtagaattcatcatggtactaaaaag 73


Query: 2713 gatgaatgcaccatcttgcaaccagacgaccggttatcgtatcgactgtttcatctttgt 2772
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 74 gatgaatgcaccatcttgcaaccagacgaccg-ttatcgtatcgactgtttcatctttgt 132


Query: 2773 cgtctccattagaaatttcaccaatcccgcttcaatgcaaagaattgaaaagaagattaa 2832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cgtctccattagaaatttcaccaatcccgcttcaatgcaaagaattgaaaagaagattaa 192


Query: 2833 agaagtactccaaatgaatattacacctttattggctatcactttctctgataccctctc 2892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agaagtactccaaatgaatattacacctttattggctatcactttctctgataccctctc 252


Query: 2893 aaagaatcaacttc 2906
||||||||||||||
Sbjct: 253 aaagaatcaacttc 266


Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Plus


Query: 3309 aaatgcttaatgaacaaccaagtaaaactatcaatgtaactattgatgtagttactgatt 3368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aaatgcttaatgaacaaccaagtaaaactatcaatgtaactattgatgtagttactgatt 364


Query: 3369 caagtggtaccgttttaacttcattcgaaattgaatcttcaacaaatgaatctgtctctg 3428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 caagtggtaccgttttaacttcattcgaaattgaatcttcaacaaatgaatctgtctctg 424


Query: 3429 aattaaaatgtaaacttattaatgaaattgatcctgaaatgaatgctaatgattggagta 3488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aattaaaatgtaaacttattaatgaaattgatcctgaaatgaatgctaatgattggagta 484


Query: 3489 ttacaaaagaat 3500
||||||||||||
Sbjct: 485 ttacaaaagaat 496


Score = 107 bits (54), Expect = 1e-22
Identities = 54/54 (100%)
Strand = Plus / Plus


Query: 1366 gtcgataccgatgtccaattgagacataaggccgagggtagaattcatcatggt 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtcgataccgatgtccaattgagacataaggccgagggtagaattcatcatggt 64


Score = 40.1 bits (20), Expect = 0.025
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 3178 atcaacttcttcaccttcaccagc 3201
||||||||||||||||||| ||||
Sbjct: 258 atcaacttcttcaccttcatcagc 281


Score = 32.2 bits (16), Expect = 6.0
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 2143 aatgattggagccttacaaaagaa 2166
||||||||||| |||||||||||
Sbjct: 472 aatgattggagtattacaaaagaa 495


Score = 32.2 bits (16), Expect = 6.0
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 2048 ttttaacttcattcga 2063
||||||||||||||||
Sbjct: 377 ttttaacttcattcga 392


Score = 32.2 bits (16), Expect = 6.0
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 1530 aattgaaaagaaaattagagaagt 1553
|||||||||||| |||| ||||||
Sbjct: 175 aattgaaaagaagattaaagaagt 198


>Contig-U13902-1 (Contig-U13902-1Q) /CSM_Contig/Contig-U13902-1Q.Seq.d
Length = 2177

Score = 153 bits (77), Expect = 2e-36
Identities = 131/149 (87%)
Strand = Plus / Plus


Query: 2933 gaattatcagttcaagagtcaaatacctttatcattagtaattacactgaaaaagaaact 2992
||||||||| ||||| | |||||||| ||||| |||| ||||||||||||||| |||||
Sbjct: 1531 gaattatcaattcaaaaatcaaatacttttattattaataattacactgaaaatgaaaca 1590


Query: 2993 cataaagatatctctaaagatgttcaatatcttagattattaaccaaagcagttcaattg 3052
||||||||| || |||||| |||||||||||||||||||||| |||||||||||| |
Sbjct: 1591 actaaagatatttcaaaagatattcaatatcttagattattaacaaaagcagttcaactt 1650


Query: 3053 tgtaaagttaaaaatgaaaaagatataat 3081
|||||| ||||||||||||||||| ||||
Sbjct: 1651 tgtaaaattaaaaatgaaaaagatttaat 1679


Score = 115 bits (58), Expect = 5e-25
Identities = 112/130 (86%)
Strand = Plus / Plus


Query: 1644 tgaattatcagttcaagaatctaatacctttatcatcaataactatactgaaaaggaaac 1703
|||||||||| ||||| |||| ||||| ||||| || ||||| || |||||||| |||||
Sbjct: 1530 tgaattatcaattcaaaaatcaaatacttttattattaataattacactgaaaatgaaac 1589


Query: 1704 tcatagagatatctctaaagatattcaatatcttagattattaacaaaagctgttcaatt 1763
|| |||||| || ||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 1590 aactaaagatatttcaaaagatattcaatatcttagattattaacaaaagcagttcaact 1649


Query: 1764 atgtaaaatt 1773
|||||||||
Sbjct: 1650 ttgtaaaatt 1659


Score = 69.9 bits (35), Expect = 3e-11
Identities = 215/275 (78%)
Strand = Plus / Plus


Query: 730 tcaattaattgtccagtcaatattgaggtttatccacacacaaatgaaaccaaatcgatt 789
||||||||||||||| | |||||||| |||| |||||| |||||||||| |||| |||
Sbjct: 617 tcaattaattgtccaattaatattgaagtttttccacattcaaatgaaactcaatcaatt 676


Query: 790 aaggacgatttactattggatgtagtaattaaaccagatggtaacacagcatcggtacca 849
|| || |||||| || || |||| | ||||||||||| || ||| ||| |||||
Sbjct: 677 aaagatgatttatatttagacatagttttaaaaccagatggaaatacatcatgtatacca 736


Query: 850 tcaggtacaaagattaaattcttatcaaacaagtactactctggctataccattcaattg 909
|| ||| |||| |||||||| ||| ||| || || ||||| || ||||| |||||| |
Sbjct: 737 tctggttcaaaaattaaatttttaccaagtaaatattactccggatatacaattcaaatt 796


Query: 910 aaacaaaatttagtatttggtgaaccatatgaagagactattaaattggagtttaaaaaa 969
||| | || | |||||||| | ||||||||||| || |||| ||| || | ||||||
Sbjct: 797 aaaaatgatattttatttggtcacccatatgaagaaacaattagattagattataaaaag 856


Query: 970 ggtcaaatgaaaaagacccaatttgaaaatttccc 1004
|||||||| |||||| ||||| | ||||||||||
Sbjct: 857 ggtcaaattgaaaagagccaatatcaaaatttccc 891


Score = 61.9 bits (31), Expect = 7e-09
Identities = 64/75 (85%)
Strand = Plus / Plus


Query: 1083 ttactttttaggtgaattaaaatcaaagtatagatgttgcattggtgtcgagggtgagat 1142
||||||||||||||| ||||||||||| |||||| || |||||||| || |||| ||
Sbjct: 970 ttactttttaggtgacttaaaatcaaaatatagagtttcaattggtgttgaaggtggtat 1029


Query: 1143 tggcaatggtaaaag 1157
||| |||||||||||
Sbjct: 1030 tggaaatggtaaaag 1044


Score = 60.0 bits (30), Expect = 3e-08
Identities = 120/150 (80%)
Strand = Plus / Plus


Query: 1303 attcatccagttcaagagtcattccatgatattgatatcgcttggtccgattcttggggt 1362
|||||||| |||||||| || || | ||||| ||||| | ||| ||||| | ||||||
Sbjct: 1190 attcatcctgttcaagaatcttttaaggatatcgatattgtatggaccgatacatggggt 1249


Query: 1363 ttcgtcgataccgatgtccaattgagacataaggccgagggtagaattcatcatggtgtc 1422
|| || ||||| ||||| | || | |||||| ||||||||||||||||||||||||
Sbjct: 1250 tttgtagatactgatgttgagttaaaacataaagccgagggtagaattcatcatggtaca 1309


Query: 1423 tcaaagaataattgtatagttcaacaacca 1452
||||| ||| ||||| || |||||| ||||
Sbjct: 1310 tcaaaaaatgattgtttaattcaactacca 1339


Score = 60.0 bits (30), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus


Query: 2641 tggggtttcgtngataccgatgtccaattgagacataaggccgagggtagaattcatcat 2700
|||||||| || ||||| ||||| | || | |||||| |||||||||||||||||||||
Sbjct: 1244 tggggttttgtagatactgatgttgagttaaaacataaagccgagggtagaattcatcat 1303


Query: 2701 ggtac 2705
|||||
Sbjct: 1304 ggtac 1308


Score = 38.2 bits (19), Expect = 0.098
Identities = 28/31 (90%)
Strand = Plus / Plus


Query: 1526 caaaaattgaaaagaaaattagagaagttat 1556
||||||||||||| |||||| |||||||||
Sbjct: 1412 caaaaattgaaaaaaaaattcaagaagttat 1442


Score = 36.2 bits (18), Expect = 0.39
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 2158 acaaaagaaaatggtacaattctatt 2183
|||||||||||||| |||||| ||||
Sbjct: 1981 acaaaagaaaatggaacaattttatt 2006


Score = 32.2 bits (16), Expect = 6.0
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 3091 taaaggtatttcaaatttat 3110
||||| ||||||||||||||
Sbjct: 561 taaagatatttcaaatttat 580


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 92,179
Number of Sequences: 8402
Number of extensions: 92179
Number of successful extensions: 18034
Number of sequences better than 10.0: 1046
length of query: 3805
length of database: 8,075,542
effective HSP length: 17
effective length of query: 3788
effective length of database: 7,932,708
effective search space: 30049097904
effective search space used: 30049097904
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 6
Homology vs DNA
Query= Contig-U15679-1 (Contig-U15679-1Q) /CSM_Contig/Contig-U15679-1Q.Seq.d
(3805 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ330420) Dictyostelium discoideum cDNA clone:dda31b15, 5' ... 1154 0.0 1
(BJ330397) Dictyostelium discoideum cDNA clone:dda31m07, 5' ... 1092 0.0 1
(BJ366422) Dictyostelium discoideum cDNA clone:ddc38m20, 5' ... 1084 0.0 2
(BJ336799) Dictyostelium discoideum cDNA clone:dda55m06, 5' ... 1068 0.0 2
(BJ369284) Dictyostelium discoideum cDNA clone:ddc49p21, 5' ... 1041 0.0 2
(BJ336498) Dictyostelium discoideum cDNA clone:dda54j04, 5' ... 831 0.0 2
(BJ380668) Dictyostelium discoideum cDNA clone:ddc38m20, 3' ... 587 0.0 3
(BJ352114) Dictyostelium discoideum cDNA clone:dda45n13, 3' ... 581 0.0 3
(BJ354590) Dictyostelium discoideum cDNA clone:dda54j04, 3' ... 539 0.0 3
(BJ394107) Dictyostelium discoideum cDNA clone:dds33g22, 5' ... 1068 0.0 2
(BJ364451) Dictyostelium discoideum cDNA clone:ddc31c22, 5' ... 973 0.0 2
(BJ347814) Dictyostelium discoideum cDNA clone:dda31c10, 3' ... 529 0.0 3
(BJ334905) Dictyostelium discoideum cDNA clone:dda48a11, 5' ... 1066 0.0 2
(BJ332724) Dictyostelium discoideum cDNA clone:dda40i17, 5' ... 1066 0.0 1
(BJ352881) Dictyostelium discoideum cDNA clone:dda48a11, 3' ... 533 0.0 3
(BJ350255) Dictyostelium discoideum cDNA clone:dda39b12, 3' ... 504 0.0 3
(BJ334255) Dictyostelium discoideum cDNA clone:dda45n13, 5' ... 1037 0.0 1
(BJ340497) Dictyostelium discoideum cDNA clone:dda2k09, 3' e... 1023 0.0 2
(BJ425593) Dictyostelium discoideum cDNA clone:ddv56a09, 5' ... 916 0.0 2
(BJ350290) Dictyostelium discoideum cDNA clone:dda39i10, 3' ... 622 0.0 3
(BJ406802) Dictyostelium discoideum cDNA clone:dds36b13, 3' ... 589 0.0 3
(BJ356070) Dictyostelium discoideum cDNA clone:dda59k04, 3' ... 494 0.0 3
(BJ403454) Dictyostelium discoideum cDNA clone:dds25n01, 3' ... 523 0.0 3
(BJ382957) Dictyostelium discoideum cDNA clone:ddc46l12, 3' ... 932 0.0 2
(BJ352991) Dictyostelium discoideum cDNA clone:dda48i16, 3' ... 589 0.0 3
(BJ391206) Dictyostelium discoideum cDNA clone:dds15i18, 5' ... 805 0.0 3
(BJ383836) Dictyostelium discoideum cDNA clone:ddc47k12, 3' ... 488 0.0 3
(BJ350874) Dictyostelium discoideum cDNA clone:dda41e10, 3' ... 484 0.0 3
(BJ348113) Dictyostelium discoideum cDNA clone:dda32a09, 3' ... 583 0.0 3
(BJ406010) Dictyostelium discoideum cDNA clone:dds33g22, 3' ... 454 0.0 4
(BJ444390) Dictyostelium discoideum cDNA clone:ddv56a09, 3' ... 509 0.0 3
(BJ352105) Dictyostelium discoideum cDNA clone:dda45l13, 3' ... 488 0.0 3
(BJ379862) Dictyostelium discoideum cDNA clone:ddc36a11, 3' ... 486 0.0 3
(BJ384890) Dictyostelium discoideum cDNA clone:ddc51i02, 3' ... 543 0.0 3
(BJ384576) Dictyostelium discoideum cDNA clone:ddc49p21, 3' ... 484 0.0 3
(BJ349813) Dictyostelium discoideum cDNA clone:dda37a20, 3' ... 541 0.0 3
(BJ350611) Dictyostelium discoideum cDNA clone:dda40p07, 3' ... 535 0.0 3
(BJ354018) Dictyostelium discoideum cDNA clone:dda52b11, 3' ... 543 0.0 3
(C93311) Dictyostelium discoideum slug cDNA, clone SSM610. 563 0.0 2
(BJ351319) Dictyostelium discoideum cDNA clone:dda42d23, 3' ... 541 0.0 3
(BJ349498) Dictyostelium discoideum cDNA clone:dda36m16, 3' ... 482 0.0 3
(BJ354470) Dictyostelium discoideum cDNA clone:dda53p18, 3' ... 539 0.0 3
(BJ357926) Dictyostelium discoideum cDNA clone:dda65m05, 3' ... 539 0.0 3
(BJ385360) Dictyostelium discoideum cDNA clone:ddc54o15, 3' ... 531 0.0 3
(BJ357409) Dictyostelium discoideum cDNA clone:dda63p12, 3' ... 533 0.0 3
(BJ351103) Dictyostelium discoideum cDNA clone:dda42f02, 3' ... 543 0.0 3
(BJ383119) Dictyostelium discoideum cDNA clone:ddc46m22, 3' ... 541 0.0 3
(BJ357715) Dictyostelium discoideum cDNA clone:dda64p12, 3' ... 529 0.0 3
(BJ353266) Dictyostelium discoideum cDNA clone:dda49e14, 3' ... 537 0.0 3
(BJ357982) Dictyostelium discoideum cDNA clone:dda65j11, 3' ... 541 0.0 3
(BJ356618) Dictyostelium discoideum cDNA clone:dda60k22, 3' ... 541 0.0 3
(BJ354697) Dictyostelium discoideum cDNA clone:dda54p10, 3' ... 541 0.0 3
(BJ355384) Dictyostelium discoideum cDNA clone:dda56k16, 3' ... 702 0.0 2
(BJ357598) Dictyostelium discoideum cDNA clone:dda64f02, 3' ... 545 0.0 2
(BJ379782) Dictyostelium discoideum cDNA clone:ddc35p24, 3' ... 541 0.0 3
(BJ354709) Dictyostelium discoideum cDNA clone:dda54b16, 3' ... 523 0.0 3
(BJ332481) Dictyostelium discoideum cDNA clone:dda39d07, 5' ... 914 0.0 2
(BJ350261) Dictyostelium discoideum cDNA clone:dda39d07, 3' ... 531 0.0 3
(BJ349735) Dictyostelium discoideum cDNA clone:dda37p12, 3' ... 450 0.0 3
(BJ350633) Dictyostelium discoideum cDNA clone:dda40d13, 3' ... 535 0.0 3
(BJ353221) Dictyostelium discoideum cDNA clone:dda49k09, 3' ... 509 0.0 4
(BJ356534) Dictyostelium discoideum cDNA clone:dda60j16, 3' ... 460 0.0 3
(BJ349921) Dictyostelium discoideum cDNA clone:dda38g05, 3' ... 492 0.0 3
(BJ357882) Dictyostelium discoideum cDNA clone:dda65c05, 3' ... 527 0.0 3
(BJ367717) Dictyostelium discoideum cDNA clone:ddc43b20, 5' ... 922 0.0 1
(BJ330355) Dictyostelium discoideum cDNA clone:dda31c10, 5' ... 916 0.0 1
(BJ384713) Dictyostelium discoideum cDNA clone:ddc50o09, 3' ... 513 0.0 3
(BJ356439) Dictyostelium discoideum cDNA clone:dda60f09, 3' ... 472 0.0 3
(BJ379009) Dictyostelium discoideum cDNA clone:ddc33c15, 3' ... 511 0.0 3
(BJ384636) Dictyostelium discoideum cDNA clone:ddc50n01, 3' ... 444 0.0 3
(BJ403503) Dictyostelium discoideum cDNA clone:dds25h07, 3' ... 509 0.0 3
(BJ347860) Dictyostelium discoideum cDNA clone:dda31m07, 3' ... 515 0.0 3
(BJ348352) Dictyostelium discoideum cDNA clone:dda32p20, 3' ... 466 0.0 3
(BJ354605) Dictyostelium discoideum cDNA clone:dda54m03, 3' ... 444 0.0 3
(BJ383546) Dictyostelium discoideum cDNA clone:ddc53l10, 3' ... 507 0.0 4
(BJ384982) Dictyostelium discoideum cDNA clone:ddc51l11, 3' ... 462 0.0 3
(BJ355555) Dictyostelium discoideum cDNA clone:dda57p11, 3' ... 496 0.0 3
(BJ353398) Dictyostelium discoideum cDNA clone:dda50e01, 3' ... 486 0.0 3
(BJ358299) Dictyostelium discoideum cDNA clone:dda56m20, 3' ... 456 0.0 3
(BJ383871) Dictyostelium discoideum cDNA clone:ddc47c17, 3' ... 472 0.0 3
(BJ407589) Dictyostelium discoideum cDNA clone:dds43e03, 3' ... 504 0.0 5
(BJ348506) Dictyostelium discoideum cDNA clone:dda33o07, 3' ... 545 0.0 3
(BJ379796) Dictyostelium discoideum cDNA clone:ddc36c03, 3' ... 446 0.0 3
(BJ354314) Dictyostelium discoideum cDNA clone:dda53p05, 3' ... 472 0.0 3
(BJ381310) Dictyostelium discoideum cDNA clone:ddc41j01, 3' ... 383 0.0 4
(BJ351082) Dictyostelium discoideum cDNA clone:dda42b01, 3' ... 509 0.0 3
(AU061885) Dictyostelium discoideum slug cDNA, clone SLG481. 609 0.0 3
(BJ353089) Dictyostelium discoideum cDNA clone:dda48n22, 3' ... 448 0.0 3
(BJ349077) Dictyostelium discoideum cDNA clone:dda35f12, 3' ... 504 0.0 3
(BJ350659) Dictyostelium discoideum cDNA clone:dda40i17, 3' ... 484 0.0 4
(BJ355841) Dictyostelium discoideum cDNA clone:dda58l07, 3' ... 428 0.0 3
(BJ354791) Dictyostelium discoideum cDNA clone:dda54c20, 3' ... 412 0.0 3
(BJ354643) Dictyostelium discoideum cDNA clone:dda54e08, 3' ... 416 0.0 3
(BJ349155) Dictyostelium discoideum cDNA clone:dda35f18, 3' ... 436 0.0 3
(BJ350749) Dictyostelium discoideum cDNA clone:dda40l21, 3' ... 488 0.0 3
(BJ351679) Dictyostelium discoideum cDNA clone:dda44c12, 3' ... 412 0.0 3
(BJ354066) Dictyostelium discoideum cDNA clone:dda52l12, 3' ... 383 0.0 3
(BJ357684) Dictyostelium discoideum cDNA clone:dda64j09, 3' ... 488 0.0 3
(BJ353392) Dictyostelium discoideum cDNA clone:dda50b06, 3' ... 398 0.0 3
(BJ378384) Dictyostelium discoideum cDNA clone:ddc31c22, 3' ... 434 0.0 4
(BJ378858) Dictyostelium discoideum cDNA clone:ddc33f02, 3' ... 385 0.0 3
(BJ354467) Dictyostelium discoideum cDNA clone:dda53p13, 3' ... 369 0.0 3
(BJ347774) Dictyostelium discoideum cDNA clone:dda31k01, 3' ... 492 0.0 3
(BJ347885) Dictyostelium discoideum cDNA clone:dda31b15, 3' ... 515 0.0 3
(BJ385374) Dictyostelium discoideum cDNA clone:ddc54b20, 3' ... 357 0.0 3
(BJ442871) Dictyostelium discoideum cDNA clone:ddv51p03, 3' ... 424 0.0 3
(BJ439407) Dictyostelium discoideum cDNA clone:ddv40i08, 3' ... 361 0.0 3
(BJ350547) Dictyostelium discoideum cDNA clone:dda40a07, 3' ... 353 0.0 3
(BJ355885) Dictyostelium discoideum cDNA clone:dda58e14, 3' ... 492 0.0 5
(BJ348539) Dictyostelium discoideum cDNA clone:dda33e18, 3' ... 488 0.0 3
(BJ351503) Dictyostelium discoideum cDNA clone:dda43n18, 3' ... 410 0.0 3
(BJ354854) Dictyostelium discoideum cDNA clone:dda55a01, 3' ... 444 0.0 4
(BJ352566) Dictyostelium discoideum cDNA clone:dda47m04, 3' ... 492 0.0 3
(BJ407187) Dictyostelium discoideum cDNA clone:dds37b22, 3' ... 361 0.0 3
(BJ351443) Dictyostelium discoideum cDNA clone:dda43a15, 3' ... 509 0.0 3
(BJ351866) Dictyostelium discoideum cDNA clone:dda44i22, 3' ... 450 0.0 3
(BJ383970) Dictyostelium discoideum cDNA clone:ddc47g19, 3' ... 515 0.0 3
(BJ355573) Dictyostelium discoideum cDNA clone:dda57d18, 3' ... 381 e-180 3
(C91436) Dictyostelium discoideum slug cDNA, clone SSK247. 515 e-177 3
(BJ353324) Dictyostelium discoideum cDNA clone:dda49b23, 3' ... 539 e-170 2
(BJ378983) Dictyostelium discoideum cDNA clone:ddc33n08, 3' ... 353 e-166 3
(BJ356941) Dictyostelium discoideum cDNA clone:dda61p19, 3' ... 371 e-166 3
(BJ354765) Dictyostelium discoideum cDNA clone:dda54m16, 3' ... 293 e-165 3
(BJ356873) Dictyostelium discoideum cDNA clone:dda61p16, 3' ... 369 e-165 3
(BJ356966) Dictyostelium discoideum cDNA clone:dda62d04, 3' ... 377 e-165 3
(BJ357019) Dictyostelium discoideum cDNA clone:dda62n06, 3' ... 515 e-163 2
(BJ382053) Dictyostelium discoideum cDNA clone:ddc43b20, 3' ... 515 e-162 2
(BJ345518) Dictyostelium discoideum cDNA clone:dda23o20, 3' ... 452 e-160 3
(BJ354923) Dictyostelium discoideum cDNA clone:dda55m06, 3' ... 504 e-157 3
(BJ360578) Dictyostelium discoideum cDNA clone:ddc6g21, 5' e... 531 e-157 2
(BJ338682) Dictyostelium discoideum cDNA clone:dda62g17, 5' ... 547 e-150 1
(BJ444311) Dictyostelium discoideum cDNA clone:ddv55p21, 3' ... 250 e-150 5
(BJ357102) Dictyostelium discoideum cDNA clone:dda62p07, 3' ... 533 e-146 1
(BJ357138) Dictyostelium discoideum cDNA clone:dda62g17, 3' ... 502 e-146 2
(AU037341) Dictyostelium discoideum slug cDNA, clone SSB795. 307 e-143 2
(AU039811) Dictyostelium discoideum slug cDNA, clone SLG481. 515 e-141 1
(BJ374167) Dictyostelium discoideum cDNA clone:ddc6g21, 3' e... 515 e-141 1
(BJ373139) Dictyostelium discoideum cDNA clone:ddc15k24, 3' ... 515 e-141 1
(BJ345710) Dictyostelium discoideum cDNA clone:dda28g14, 3' ... 515 e-141 1
(BJ342098) Dictyostelium discoideum cDNA clone:dda9c13, 3' e... 515 e-141 1
(BJ340825) Dictyostelium discoideum cDNA clone:dda4d06, 3' e... 515 e-141 1
(BJ384136) Dictyostelium discoideum cDNA clone:ddc48k07, 3' ... 355 e-140 3
(BJ401653) Dictyostelium discoideum cDNA clone:dds23p22, 3' ... 509 e-139 1
(BJ356060) Dictyostelium discoideum cDNA clone:dda59i03, 3' ... 327 e-138 3
(BJ344423) Dictyostelium discoideum cDNA clone:dda19b08, 3' ... 502 e-137 1
(BJ383210) Dictyostelium discoideum cDNA clone:ddc52a11, 3' ... 280 e-136 11
(BJ356784) Dictyostelium discoideum cDNA clone:dda61m10, 3' ... 424 e-135 2
(BJ400962) Dictyostelium discoideum cDNA clone:dds15i18, 3' ... 484 e-134 2
(BJ376367) Dictyostelium discoideum cDNA clone:ddc28a12, 3' ... 488 e-133 1
(BJ399880) Dictyostelium discoideum cDNA clone:dds7j23, 3' e... 480 e-130 1
(BJ347536) Dictyostelium discoideum cDNA clone:dda27k10, 3' ... 446 e-130 2
(BJ349649) Dictyostelium discoideum cDNA clone:dda37o06, 3' ... 268 e-128 3
(AU072998) Dictyostelium discoideum slug cDNA, clone SSF677. 391 e-103 1
(BJ346122) Dictyostelium discoideum cDNA clone:dda29m05, 3' ... 385 e-102 1
(BJ402999) Dictyostelium discoideum cDNA clone:dds18a05, 3' ... 375 8e-99 1
(BJ380273) Dictyostelium discoideum cDNA clone:ddc37j13, 3' ... 293 2e-98 2
(AU073814) Dictyostelium discoideum slug cDNA, clone SSI430. 373 3e-98 1
(BJ375070) Dictyostelium discoideum cDNA clone:ddc17g09, 3' ... 361 1e-94 1
(BJ342420) Dictyostelium discoideum cDNA clone:dda13l21, 3' ... 357 2e-93 1
(BJ398252) Dictyostelium discoideum cDNA clone:dds11m14, 3' ... 355 8e-93 1
(BJ383597) Dictyostelium discoideum cDNA clone:ddc53h13, 3' ... 113 9e-93 11
(AU074291) Dictyostelium discoideum slug cDNA, clone SSK247. 353 3e-92 1
(BJ354930) Dictyostelium discoideum cDNA clone:dda55o02, 3' ... 321 1e-82 1
(BJ347074) Dictyostelium discoideum cDNA clone:dda26d03, 3' ... 107 5e-57 4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 153 8e-48 16
(BJ402096) Dictyostelium discoideum cDNA clone:dds20a13, 3' ... 153 3e-47 3
(BJ381088) Dictyostelium discoideum cDNA clone:ddc40f12, 3' ... 192 7e-44 1
(BJ345895) Dictyostelium discoideum cDNA clone:dda29m11, 3' ... 184 2e-41 1
(BJ382535) Dictyostelium discoideum cDNA clone:ddc45f04, 3' ... 172 6e-38 1
(BJ334596) Dictyostelium discoideum cDNA clone:dda47h06, 5' ... 170 2e-37 1
(BJ401665) Dictyostelium discoideum cDNA clone:dds19c03, 3' ... 153 2e-36 3
(BJ353951) Dictyostelium discoideum cDNA clone:dda52c04, 3' ... 153 6e-36 3
(BJ347121) Dictyostelium discoideum cDNA clone:dda26m03, 3' ... 153 7e-36 3
(BJ380477) Dictyostelium discoideum cDNA clone:ddc38e09, 3' ... 153 7e-36 3
(BJ404267) Dictyostelium discoideum cDNA clone:dds27p24, 3' ... 133 7e-31 2
(BJ385390) Dictyostelium discoideum cDNA clone:ddc54e21, 3' ... 147 3e-30 2
(BJ375327) Dictyostelium discoideum cDNA clone:ddc18e11, 3' ... 62 1e-28 6
(BJ340233) Dictyostelium discoideum cDNA clone:dda12a09, 3' ... 107 5e-25 2
(BJ389505) Dictyostelium discoideum cDNA clone:dds19c03, 5' ... 62 2e-20 3
(C90227) Dictyostelium discoideum slug cDNA, clone SSI430. 101 1e-16 2
(BJ341696) Dictyostelium discoideum cDNA clone:dda7c23, 3' e... 62 1e-16 4
(C90900) Dictyostelium discoideum slug cDNA, clone SSJ285. 56 8e-07 2
(BJ398789) Dictyostelium discoideum cDNA clone:dds2c10, 3' e... 60 2e-05 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 38 2e-04 13
(AF362371) Dictyostelium discoideum histidine kinase DhkI (d... 34 0.001 6
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.002 14
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 36 0.003 14
(DY891908) CeleSEQ8657 Cunninghamella elegans pBluescript (E... 46 0.023 3
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 40 0.034 9
(CB284640) DF1411 Dermatophagoides farinae cDNA library Derm... 42 0.037 4
(CR376737) Zebrafish DNA sequence from clone CH211-14G13 in ... 54 0.040 1
(AY232272) Dictyostelium discoideum putative protein Roco10 ... 42 0.056 5
(CT027752) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 0.091 12
(BX511223) Zebrafish DNA sequence from clone DKEYP-96B6 in l... 36 0.10 13
(CN776258) tae79b01.y1 Hydra EST Darmstadt I Hydra magnipapi... 44 0.12 3
(BJ356352) Dictyostelium discoideum cDNA clone:dda60f01, 3' ... 52 0.16 1
(BJ349269) Dictyostelium discoideum cDNA clone:dda35o21, 3' ... 52 0.16 1
(EK487039) 1095500034561 Global-Ocean-Sampling_GS-32-01-01-1... 50 0.17 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 34 0.18 14
(DR436329) ACAB-aaa47c11.g1 Hydra UCI6- barcoded EST's Hydra... 44 0.19 3
(CN768927) taf21b12.x1 Hydra EST Darmstadt I Hydra magnipapi... 44 0.19 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.20 11
(EW967818) LS_13_L07_T7 Headlice composite library with all ... 42 0.28 3
(EU306659) Medicago truncatula zinc finger protein, GH1 prot... 40 0.34 2
(AC178991) Strongylocentrotus purpuratus clone R3-3122K12, W... 40 0.35 2
(AC168831) Strongylocentrotus purpuratus clone R3-13D18, WOR... 40 0.35 2
(AC181500) Strongylocentrotus purpuratus clone R3-57N16, WOR... 40 0.36 2
(AC174877) Strongylocentrotus purpuratus clone R3-1107I22, W... 40 0.36 2
(AC126010) Medicago truncatula clone mth2-20e4, complete seq... 40 0.36 2
(AP006736) Lotus japonicus genomic DNA, chromosome 1, clone:... 40 0.40 9
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 42 0.43 13
(AZ177518) SP_0147_A1_H06_T7A Strongylocentrotus purpuratus,... 40 0.46 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 34 0.51 12
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 0.56 13
(AR556265) Sequence 11396 from patent US 6747137. 50 0.62 1
(AC231221) Monodelphis domestica clone VMRC18-533K15, WORKIN... 50 0.62 1
(DV155291) CV03097B1C05.f1 CV03-normalized library Euphorbia... 50 0.62 1
(BX085193) Zebrafish DNA sequence from clone DKEY-20F20 in l... 38 1.3 2
(AC164487) Danio rerio strain Tue clone CH211-90M23, WORKING... 38 1.3 2
(BX322580) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 1.4 9
(AC210381) Populus trichocarpa clone ACSB2121-E05, complete ... 38 1.4 2
(AJ291718) Human immunodeficiency virus type 1 complete geno... 46 1.4 2
(CN753031) ApHL3LD-XI-C3 ApHL3LD Acyrthosiphon pisum cDNA cl... 48 1.5 2
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 36 1.5 7
(DE436316) Bombyx mori genomic DNA, Fosmid clone:GBMFno23_c0... 36 1.7 2
(AL035475) Plasmodium falciparum MAL4P2. 34 1.8 16
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 1.9 14
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 34 1.9 13
(BJ419005) Dictyostelium discoideum cDNA clone:ddv34a21, 5' ... 38 1.9 2
(FP017190) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 2.0 4
(CR759883) Zebrafish DNA sequence from clone DKEY-56K23 in l... 42 2.1 13
(BX005416) Zebrafish DNA sequence from clone CH211-287J19 in... 36 2.2 15
(CR847796) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 2.2 10
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 40 2.2 10
(AC121758) Homo sapiens 12 BAC RP11-74M13 (Roswell Park Canc... 48 2.5 1
(AC128108) Rattus norvegicus clone CH230-409P24, *** SEQUENC... 48 2.5 1
(AC105871) Rattus norvegicus clone CH230-150F21, *** SEQUENC... 48 2.5 1
(CU914328) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.5 1
(CU855751) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 2.5 1
(AC094159) Rattus norvegicus clone CH230-2M23, *** SEQUENCIN... 48 2.5 1
(AC220247) Bos taurus clone CH240-367H16, WORKING DRAFT SEQU... 48 2.5 1
(AC185911) Bos taurus clone RP42-128L15, WORKING DRAFT SEQUE... 48 2.5 1
(AC176685) Strongylocentrotus purpuratus clone R3-3088D24, W... 48 2.5 1
(AZ706473) RPCI-23-227A16.TV RPCI-23 Mus musculus genomic cl... 48 2.5 1
(AZ164738) SP_0076_B2_B08_SP6E Strongylocentrotus purpuratus... 48 2.5 1
(ER841895) PPTIZ26TR Solanum tuberosum RHPOTKEY BAC ends Sol... 48 2.5 1
(EJ845887) 1093017855579 Global-Ocean-Sampling_GS-30-02-01-1... 48 2.5 1
(EJ838532) 1093017815986 Global-Ocean-Sampling_GS-30-02-01-1... 48 2.5 1
(EI473990) PV_GBa0083L16.r PV_GBa Phaseolus vulgaris genomic... 48 2.5 1
(CT053732) Sus scrofa genomic clone PigE-46M16, genomic surv... 48 2.5 1
(CR898440) Sus scrofa BES. 48 2.5 1
(DV609014) EST1212010 Glossina morsitans morsitans Fat body ... 48 2.5 1
(DV608536) EST1211532 Glossina morsitans morsitans Fat body ... 48 2.5 1
(DV608453) EST1211449 Glossina morsitans morsitans Fat body ... 48 2.5 1
(DV605296) EST1208292 Glossina morsitans morsitans Fat body ... 48 2.5 1
(DV601265) EST1204260 Glossina morsitans morsitans Fat body ... 48 2.5 1
(DT333492) SusFleck_BF_0149_0152_5_pCNS_E09 SusFleck Backfat... 48 2.5 1
(BX565470) Glossina morsitans morsitans (Tseatse fly) EST fr... 48 2.5 1
(BX562491) Glossina morsitans morsitans (Tseatse fly) EST fr... 48 2.5 1
(BX562436) Glossina morsitans morsitans (Tseatse fly) EST fr... 48 2.5 1
(BX558656) Glossina morsitans morsitans (Tseatse fly) EST fr... 48 2.5 1
(BX556172) Glossina morsitans morsitans (Tseatse fly) EST fr... 48 2.5 1
(BX551247) Glossina morsitans morsitans (Tseatse fly) EST fr... 48 2.5 1
(AL672016) Zebrafish DNA sequence from clone BUSM1-63M10 in ... 36 2.5 11
(AE017308) Mycoplasma mobile 163K complete genome. 38 2.6 20
(AC002386) Homo sapiens BAC clone CTA-343H22 from 7, complet... 34 2.6 9
(CJ361625) Molgula tectiformis cDNA, cleaving embryo clone:m... 36 2.9 3
(AL672118) Zebrafish DNA sequence from clone XX-113D7 Contai... 36 2.9 7
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 3.0 23
(BJ445316) Dictyostelium discoideum cDNA clone:ddv59i06, 3' ... 42 3.0 3
(AC012439) Homo sapiens clone RP11-11G23, WORKING DRAFT SEQU... 40 3.1 12
(AF274444) Carsonella ruddii ribosomal protein L11 (rpL11), ... 30 3.4 9
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 3.8 18
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 3.8 21
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 44 3.9 9
(AM439784) Vitis vinifera contig VV78X179803.6, whole genome... 36 4.0 5
(EJ019767) 1095442006340 Global-Ocean-Sampling_GS-26-01-01-1... 42 4.2 3
(DQ866052) Cydistomyia duplonotata mitochondrion, complete g... 36 4.3 7
(EJ042059) 1095454097995 Global-Ocean-Sampling_GS-26-01-01-1... 42 4.4 3
(BJ424731) Dictyostelium discoideum cDNA clone:ddv53k09, 5' ... 36 4.6 2
(AC110410) Rattus norvegicus clone CH230-28G17, *** SEQUENCI... 34 4.6 2
(EF015439) Orpiella concavum cytochrome oxidase subunit I (C... 40 4.6 2
(AU267262) Dictyostelium discoideum vegetative cDNA clone:VS... 38 4.7 2
(EL494412) C11_PFBAMHI-M-T7-PLATE22A.AB1 Blood stage Plasmod... 36 4.7 3
(AM270382) Aspergillus niger contig An16c0300, complete genome. 34 4.8 2
(AM457890) Vitis vinifera contig VV78X177899.5, whole genome... 36 4.8 6
(AE017245) Mycoplasma synoviae 53, complete genome. 38 4.8 18
(BX649555) Zebrafish DNA sequence from clone CH211-117C13 in... 38 4.8 11
(EL495995) F08_PFBAMHI-M-T3-PLATE7A.AB1 Blood stage Plasmodi... 36 4.9 3
(AG934886) Drosophila ananassae DNA, clone: DNB1-002B15.R.fa... 44 5.1 2
(BJ332005) Dictyostelium discoideum cDNA clone:dda37j23, 5' ... 36 5.2 2
(EL493113) A09_PFBAMHI-L-T7-PLATE13A.AB1 Blood stage Plasmod... 36 5.2 3
(AU267263) Dictyostelium discoideum vegetative cDNA clone:VS... 38 5.3 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 46 5.4 11
(AP010785) Solanum lycopersicum DNA, chromosome 8, clone: C0... 36 5.7 11
(DV253897) A2FN550TV Aedes aegypti full length cDNA library,... 42 5.9 2
(CP000312) Clostridium perfringens SM101, complete genome. 38 6.0 24
(AJ860922) Brassica rapa subsp. pekinensis GSS, clone KBrH06... 34 6.1 2
(EJ581464) 1092960172453 Global-Ocean-Sampling_GS-29-01-01-1... 32 6.2 4
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 6.2 10
(DK218856) Oryzias latipes cDNA, clone: olova40d12, 3' end. 36 6.2 2
(DK033362) Oryzias latipes cDNA, clone: olbr32d12, 3' end. 36 6.2 2
(DK168735) Oryzias latipes cDNA, clone: olec30m21, 3' end. 36 6.2 2
(CZ976426) 178306 Tomato MboI BAC Library Solanum lycopersic... 32 6.2 2
(CT014460) KBrH123K13 genomic clone, KBrH (HindIII) BAC libr... 34 6.3 2
(CT011533) KBrH119K20 genomic clone, KBrH (HindIII) BAC libr... 34 6.3 2
(EL496556) G08_PFBAMHI-L-T3-PLATE3A.AB1 Blood stage Plasmodi... 36 6.4 3
(CU326380) S.lycopersicum DNA sequence from clone LE_HBa-75M... 34 6.5 11
(BJ392385) Dictyostelium discoideum cDNA clone:dds27o11, 5' ... 38 6.5 2
(AL928760) Human chromosome 14 DNA sequence Partial sequence... 36 6.7 3
(AC182910) Bos taurus clone CH240-308K10, WORKING DRAFT SEQU... 36 6.8 10
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 34 6.8 8
(EI822681) POTEC26TR Solanum tuberosum RHPOTKEY BAC ends Sol... 38 6.8 2
(EL495576) E11_PFBAMHI-M-T3-PLATE27A.AB1 Blood stage Plasmod... 36 7.1 3
(GE353681) 289174008 Nasonia vitripennis Male Pupae Nasonia ... 46 7.1 2
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 32 7.3 8
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 7.3 10
(BJ392431) Dictyostelium discoideum cDNA clone:dds27k17, 5' ... 38 7.3 2
(DV249623) A2FM419TV Aedes aegypti full length cDNA library,... 42 7.3 2
(DV249621) A2FM419TO Aedes aegypti full length cDNA library,... 42 7.4 2
(BJ442050) Dictyostelium discoideum cDNA clone:ddv48o13, 3' ... 36 7.5 3
(BV663349) S217P60181FE2.T0 Noemie Pan troglodytes troglodyt... 42 7.6 2
(DV252275) A2FNG08TV Aedes aegypti full length cDNA library,... 42 7.8 2
(DV252274) A2FNG08TO Aedes aegypti full length cDNA library,... 42 7.8 2
(CR388376) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 7.8 11
(DV240593) A2FL121TO Aedes aegypti full length cDNA library,... 42 7.8 2
(BX284625) Zebrafish DNA sequence from clone DKEYP-55F12 in ... 40 8.1 4
(AC226858) Pteropus vampyrus clone CH279-260J19, WORKING DRA... 36 8.6 12
(DV240594) A2FL121TV Aedes aegypti full length cDNA library,... 42 8.8 2
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 32 9.3 14
(BJ328890) Dictyostelium discoideum cDNA clone:dda30a03, 5' ... 36 9.3 2
(EL494952) D10_PFBAMHI-M-T7-PLATE17A.AB1 Blood stage Plasmod... 36 9.6 3
(CU138575) Zebrafish DNA sequence from clone CH211-159E5. 46 9.7 1
(CR356242) Zebrafish DNA sequence from clone DKEY-263D4 in l... 46 9.7 1
(EF025323) HIV-1 isolate 00CMNYU2541 subtype G from Cameroon... 46 9.7 1
(EF025171) HIV-1 isolate 00CMNYU2547 subtype A1G clone 4 fro... 46 9.7 1
(EF025170) HIV-1 isolate 00CMNYU2547 subtype A1G clone 3 fro... 46 9.7 1
(EF025169) HIV-1 isolate 00CMNYU2547 subtype A1G clone 2 fro... 46 9.7 1
(EF025168) HIV-1 isolate 00CMNYU2547 subtype A1G clone 1 fro... 46 9.7 1
(AY502574) HIV-1 isolate woman_57 clone 12 from Central Afri... 46 9.7 1
(AY502564) HIV-1 isolate woman_57 clone 3 from Central Afric... 46 9.7 1
(AY502528) HIV-1 isolate woman_57 clone 14 from Central Afri... 46 9.7 1
(AY502519) HIV-1 isolate woman_57 clone 2 from Central Afric... 46 9.7 1
(AY502507) HIV-1 isolate woman_57 clone 4 from Central Afric... 46 9.7 1
(AY502506) HIV-1 isolate woman_57 clone 10 from Central Afri... 46 9.7 1
(AY502491) HIV-1 isolate woman_57 clone 1 from Central Afric... 46 9.7 1
(AY502471) HIV-1 isolate woman_57 clone 10 from Central Afri... 46 9.7 1
(AY502455) HIV-1 isolate woman_57 clone 8 from Central Afric... 46 9.7 1
(AY502453) HIV-1 isolate woman_57 clone 10 from Central Afri... 46 9.7 1
(AY502451) HIV-1 isolate woman_57 clone 13 from Central Afri... 46 9.7 1
(AY502450) HIV-1 isolate woman_57 clone 12 from Central Afri... 46 9.7 1
(AY502442) HIV-1 isolate woman_57 clone 13 from Central Afri... 46 9.7 1
(AY502434) HIV-1 isolate woman_57 clone 6 from Central Afric... 46 9.7 1
(AY502378) HIV-1 isolate woman_57 clone 13 from Central Afri... 46 9.7 1
(AY502376) HIV-1 isolate woman_57 clone 6 from Central Afric... 46 9.7 1
(AY502371) HIV-1 isolate woman_57 clone 15 from Central Afri... 46 9.7 1
(AY502368) HIV-1 isolate woman_57 clone 2 from Central Afric... 46 9.7 1
(AY502365) HIV-1 isolate woman_57 clone 16 from Central Afri... 46 9.7 1
(AY502339) HIV-1 isolate woman_57 clone 9 from Central Afric... 46 9.7 1
(AY502322) HIV-1 isolate woman_57 clone 11 from Central Afri... 46 9.7 1
(AY502312) HIV-1 isolate woman_57 clone 6 from Central Afric... 46 9.7 1
(AY502300) HIV-1 isolate woman_57 clone 5 from Central Afric... 46 9.7 1
(AY502298) HIV-1 isolate woman_57 clone 7 from Central Afric... 46 9.7 1
(AY502290) HIV-1 isolate woman_57 clone 8 from Central Afric... 46 9.7 1
(AY502274) HIV-1 isolate woman_57 clone 1 from Central Afric... 46 9.7 1
(AY502267) HIV-1 isolate woman_57 clone 1 from Central Afric... 46 9.7 1
(AY502248) HIV-1 isolate woman_57 clone 16 from Central Afri... 46 9.7 1
(AY502247) HIV-1 isolate woman_57 clone 3 from Central Afric... 46 9.7 1
(AY502233) HIV-1 isolate woman_57 clone 7 from Central Afric... 46 9.7 1
(AY502231) HIV-1 isolate woman_57 clone 15 from Central Afri... 46 9.7 1
(AY502202) HIV-1 isolate woman_57 clone 14 from Central Afri... 46 9.7 1
(AY502169) HIV-1 isolate woman_57 clone 4 from Central Afric... 46 9.7 1
(AY502147) HIV-1 isolate woman_57 clone 4 from Central Afric... 46 9.7 1
(AY502141) HIV-1 isolate woman_57 clone 5 from Central Afric... 46 9.7 1
(AC158553) Mus musculus chromosome 8, clone RP23-349E13, com... 46 9.7 1
(CU928925) S.lycopersicum DNA sequence from clone SL_MboI-10... 46 9.7 1
(CP000502) Pichia stipitis CBS 6054 chromosome 8, complete s... 46 9.7 1
(AY830127) Medicago sativa heat shock protein 70 (HSP70-1) m... 46 9.7 1
(AM480149) Vitis vinifera contig VV78X133415.5, whole genome... 46 9.7 1
(AL161537) Arabidopsis thaliana DNA chromosome 4, contig fra... 46 9.7 1
(AL049656) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 46 9.7 1
(AC147536) Medicago truncatula clone mth2-9l3, complete sequ... 46 9.7 1
(AC146757) Medicago truncatula clone mth2-16n21, complete se... 46 9.7 1
(DJ386679) Diagnosis of Diseases Associated with Metastasis. 46 9.7 1
(AX348809) Sequence 267 from Patent WO0202807. 46 9.7 1
(AX346646) Sequence 1717 from Patent WO0200928. 46 9.7 1
(AX281475) Sequence 139 from Patent WO0177376. 46 9.7 1
(AP002533) Homo sapiens genomic DNA, chromosome 1q22-q23, CD... 46 9.7 1
(AL353894) Human DNA sequence from clone RP11-452O22 on chro... 46 9.7 1
(AB045360) Homo sapiens genomic DNA, chromosome 1q22-q23, cl... 46 9.7 1
(AC154997) Bos taurus clone CH240-42D23, WORKING DRAFT SEQUE... 46 9.7 1
(AC128373) Rattus norvegicus clone CH230-160K22, WORKING DRA... 46 9.7 1
(AC128192) Rattus norvegicus clone CH230-32F18, *** SEQUENCI... 46 9.7 1
(AC115225) Rattus norvegicus clone CH230-31H11, *** SEQUENCI... 46 9.7 1
(AC106475) Rattus norvegicus clone CH230-160H18, WORKING DRA... 46 9.7 1
(AC103239) Rattus norvegicus clone CH230-24C2, WORKING DRAFT... 46 9.7 1
(AC099251) Rattus norvegicus clone CH230-159B11, *** SEQUENC... 46 9.7 1
(FP015897) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 9.7 1
(CU639405) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 9.7 1
(AC094114) Rattus norvegicus clone CH230-2N4, *** SEQUENCING... 46 9.7 1
(AC073780) Mus musculus clone RP23-396E12, WORKING DRAFT SEQ... 46 9.7 1
(AC068650) Mus musculus clone RP23-73D5, WORKING DRAFT SEQUE... 46 9.7 1
(AC224584) Bos taurus clone CH240-481J11, WORKING DRAFT SEQU... 46 9.7 1
(AC221796) Bos taurus clone CH240-385H4, WORKING DRAFT SEQUE... 46 9.7 1
(AC217386) Pongo abelii chromosome UNKNOWN clone CH276-69K2,... 46 9.7 1
(AC184324) Strongylocentrotus purpuratus clone R3-1035K3, WO... 46 9.7 1
(AC173030) Bos taurus clone CH240-271I3, WORKING DRAFT SEQUE... 46 9.7 1
(AC010814) Homo sapiens clone RP11-3F3, WORKING DRAFT SEQUEN... 46 9.7 1
(AQ962045) LERGD05TR LERG Arabidopsis thaliana genomic clone... 46 9.7 1
(ER987247) CLONE66F5-5' lymphoblast cell line KCB-99002 Noma... 46 9.7 1
(EK518979) 1095515510891 Global-Ocean-Sampling_GS-32-01-01-1... 46 9.7 1
(EK035320) 1092959435395 Global-Ocean-Sampling_GS-31-01-01-1... 46 9.7 1
(EJ590948) 1092961050078 Global-Ocean-Sampling_GS-29-01-01-1... 46 9.7 1
(CZ287932) cp55d07.r Candida parapsilosis Random Genomic Lib... 46 9.7 1
(CG945350) MBEHL92TF mth2 Medicago truncatula genomic clone ... 46 9.7 1
(CG923197) MBELH06TF mth2 Medicago truncatula genomic clone ... 46 9.7 1
(BH595827) BOHKI38TR BOHK Brassica oleracea genomic clone BO... 46 9.7 1
(BH593790) BOGRR94TF BOGR Brassica oleracea genomic clone BO... 46 9.7 1
(EL916060) INIT2_98_H02.g1_A006 G5 trophont cDNA (INIT2) Ich... 46 9.7 1
(EL474648) CHUL2592.b1_O24.ab1 CHU(LMS) puzzle sunflower Hel... 46 9.7 1
(EL356730) CCEM1524.b1_H22.ab1 CCE(LMS) endive Cichorium end... 46 9.7 1
(EH123123) LB004111.CR_M18 GC_BGC-04 Bos taurus cDNA 5', mRN... 46 9.7 1
(DY809756) CTOX18306.b1_C18.ab1 CTO(XYZ) dandelion Taraxacum... 46 9.7 1
(DY809710) CTOX18258.b1_C06.ab1 CTO(XYZ) dandelion Taraxacum... 46 9.7 1
(DV144397) CV03136B1A02.f1 CV03-normalized library Euphorbia... 46 9.7 1
(DT838855) LB00446.CR_B22 GC_BGC-04 Bos taurus cDNA clone IM... 46 9.7 1
(DN641638) UMC-bof_0A01-021-f02 Ovarian follicle recruited b... 46 9.7 1
(CX735001) 437_E04_M13F_PP Sea bream estradiol-treated testi... 46 9.7 1
(CX532369) s13dNF60H09MJ076_271031 Methyl Jasmonate-Elicited... 46 9.7 1
(CX527105) s13dNF40A08AT065_514722 Aphid-Infected Shoots Med... 46 9.7 1
(CX518871) s13dNF38C01VI002_438962 Virus-Infected Leaves Med... 46 9.7 1
(CO516533) s13dSG57C0100002_446394 Glandular trichomes Medic... 46 9.7 1
(AL385466) Medicago truncatula EST MtBC28G04F1 : T3 end of c... 46 9.7 1
(AL375012) Medicago truncatula EST MtBB10G06R1 : T7 end of c... 46 9.7 1
(AL374946) Medicago truncatula EST MtBB10C11R2 : T7 end of c... 46 9.7 1
(AL374934) Medicago truncatula EST MtBB10C02R1 : T7 end of c... 46 9.7 1
(AL373765) Medicago truncatula EST MtBB02F10R1 : T7 end of c... 46 9.7 1
(AL373764) Medicago truncatula EST MtBB02F10F2 : T3 end of c... 46 9.7 1
(AL369293) Medicago truncatula EST MtBA30A07R1 : T7 end of c... 46 9.7 1
(AL369025) Medicago truncatula EST MtBA28D07R1 : T7 end of c... 46 9.7 1
(AL368528) Medicago truncatula EST MtBA25A10R1 : T7 end of c... 46 9.7 1
(AJ504379) Medicago truncatula EST, clone mtgmadc120046g10. 46 9.7 1
(CI019866) Oryza sativa Japonica Group cDNA, clone: 007-M058... 46 9.7 1
(CB894666) EST647458 HOGA Medicago truncatula cDNA clone HOG... 46 9.7 1
(BJ328360) Dictyostelium discoideum cDNA clone:dda23l19, 5' ... 46 9.7 1
(BG588408) EST490217 MHRP- Medicago truncatula cDNA clone pM... 46 9.7 1
(BG581465) EST483199 GVN Medicago truncatula cDNA clone pGVN... 46 9.7 1
(BG456570) NF082C12PL1F1088 Phosphate starved leaf Medicago ... 46 9.7 1
(BF632012) NF033H06DT1F1057 Drought Medicago truncatula cDNA... 46 9.7 1
(BE941821) EST421400 MGHG Medicago truncatula cDNA clone pMG... 46 9.7 1
(BE320945) NF028E12RT1F1087 Developing root Medicago truncat... 46 9.7 1
(GE442128) 294565010 Nasonia vitripennis Adult Female Nasoni... 46 9.7 1
(GE426272) 294516379 Nasonia vitripennis Adult Male Nasonia ... 46 9.7 1
(GE424709) 294514757 Nasonia vitripennis Adult Male Nasonia ... 46 9.7 1
(GE405418) 293794597 Nasonia vitripennis Female Pupae Nasoni... 46 9.7 1
(GE396497) 293779679 Nasonia vitripennis Female Pupae Nasoni... 46 9.7 1
(GE395666) 293777957 Nasonia vitripennis Female Pupae Nasoni... 46 9.7 1
(GE376827) 292319500 Nasonia vitripennis Male Pupae Nasonia ... 46 9.7 1
(GE372759) 292308124 Nasonia vitripennis Male Pupae Nasonia ... 46 9.7 1
(GE355812) 291525790 Nasonia vitripennis Male Pupae Nasonia ... 46 9.7 1
(GE355639) 291521186 Nasonia vitripennis Male Pupae Nasonia ... 46 9.7 1
(GE354941) 289191576 Nasonia vitripennis Male Pupae Nasonia ... 46 9.7 1
(GE354894) 289187640 Nasonia vitripennis Male Pupae Nasonia ... 46 9.7 1
(GE354153) 289176216 Nasonia vitripennis Male Pupae Nasonia ... 46 9.7 1
(GE350775) MEUAT25TR JCVI-MT2 Medicago truncatula cDNA 3', m... 46 9.7 1
(GE350734) MEUAS69TR JCVI-MT2 Medicago truncatula cDNA 3', m... 46 9.7 1
(GE345879) MEUAT25TF JCVI-MT2 Medicago truncatula cDNA 5', m... 46 9.7 1
(GE345830) MEUAS69TF JCVI-MT2 Medicago truncatula cDNA 5', m... 46 9.7 1
(FD921925) CBOX3320.fwd CBOX Volvox carteri f. nagariensis i... 46 9.7 1
(FD824428) CBGZ23561.fwd CBGZ Volvox carteri f. nagariensis ... 46 9.7 1
(FD823260) CBGZ22926.fwd CBGZ Volvox carteri f. nagariensis ... 46 9.7 1
(FD424391) RT00037R_T3_037_F03_02JUN2004_021_ab1 CrUniGene r... 46 9.7 1
(FD420526) 1_SM-JB_R15-C09_T3__C09_3100402_05_ab1 CrUniGene ... 46 9.7 1
(AW774349) EST333500 KV3 Medicago truncatula cDNA clone pKV3... 46 9.7 1
(AW696117) NF102F04ST1F1042 Developing stem Medicago truncat... 46 9.7 1
(AW329471) N200712e rootphos(-) Medicago truncatula cDNA clo... 46 9.7 1
(AW329134) N200341e rootphos(-) Medicago truncatula cDNA clo... 46 9.7 1
(EY477921) METB823TF JCVI-MT3 Medicago truncatula cDNA 5', m... 46 9.7 1
(EY388958) CAXA7587.rev CAXA Helobdella robusta Subtracted L... 46 9.7 1
(EX526648) MTGland-A072_2007-08-20/MTGland-72_C13_031_1 Medi... 46 9.7 1
(EX525623) ALF-R-5_2007-07-18_1/ALF(R)-5_G08_013_1 Alfalfa (... 46 9.7 1
(EX523059) ALF-R-09_2007-07-20_1/ALF(R)-9_K22_043_1 Alfalfa ... 46 9.7 1
(EV255351) MTYCJ84TF JCVI-MT1 Medicago truncatula cDNA 5', m... 46 9.7 1
(ES647419) NVPS105TR NVPP Nasonia vitripennis cDNA, mRNA seq... 46 9.7 1
(CP000323) Psychrobacter cryohalolentis K5, complete genome. 46 9.7 1
(AP006716) Staphylococcus haemolyticus JCSC1435 DNA, complet... 46 9.7 1
(AF179379) Mycoplasma fermentans orfH1 gene (partial cds), I... 46 9.7 1

>(BJ330420) Dictyostelium discoideum cDNA clone:dda31b15, 5' end,
single read.
Length = 615

Score = 1154 bits (582), Expect = 0.0
Identities = 582/582 (100%)
Strand = Plus / Plus


Query: 84 tcaaaataataatcaaagacatgcacttaaaactgaaattaaaacagtttttaattcaga 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 tcaaaataataatcaaagacatgcacttaaaactgaaattaaaacagtttttaattcaga 87


Query: 144 tagtggtgttacttatttttcaattttaattgaaacatcatcaaaaatgtcattgtataa 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tagtggtgttacttatttttcaattttaattgaaacatcatcaaaaatgtcattgtataa 147


Query: 204 tgtaattattaagacatttattactcaacttcaaaaagctaatagagagtgtcaaattca 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tgtaattattaagacatttattactcaacttcaaaaagctaatagagagtgtcaaattca 207


Query: 264 aatcattacctatggtgatagtgttaatacaatctttgaatttgattcggaaccaaatga 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aatcattacctatggtgatagtgttaatacaatctttgaatttgattcggaaccaaatga 267


Query: 324 attaaaagatagcttaaaagaaattaaattctctaaagataatgaagaagcaaaattggg 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 attaaaagatagcttaaaagaaattaaattctctaaagataatgaagaagcaaaattggg 327


Query: 384 tgaagcaatgagaatgtgtttcaataatatcgaatccaattggtccagtgatttaatgtc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgaagcaatgagaatgtgtttcaataatatcgaatccaattggtccagtgatttaatgtc 387


Query: 444 aaagatcatcatcatcagttcgggtcaatctactgatgattcaagtgatgatttagttga 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaagatcatcatcatcagttcgggtcaatctactgatgattcaagtgatgatttagttga 447


Query: 504 tatcttgagtttggataataatagtatctatggtttggcaggctgcaacctagcaaacaa 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tatcttgagtttggataataatagtatctatggtttggcaggctgcaacctagcaaacaa 507


Query: 564 atcatccgatgaggctgtaaaagatttgcaatcacttttaccagaccaaaaagttatccc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atcatccgatgaggctgtaaaagatttgcaatcacttttaccagaccaaaaagttatccc 567


Query: 624 attgggtaagaatccaagccaagacattagattgttgatgaa 665
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 attgggtaagaatccaagccaagacattagattgttgatgaa 609

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 4,030,954,011
Number of extensions: 249886250
Number of successful extensions: 23149148
Number of sequences better than 10.0: 492
Length of query: 3805
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 3780
Effective length of database: 96,311,147,814
Effective search space: 364056138736920
Effective search space used: 364056138736920
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15679-1 (Contig-U15679-1Q) /CSM_Contig/Contig-U15679-1Q.Seq.d
(3805 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC116305_17(AC116305|pid:none) Dictyostelium discoideum chromoso... 721 0.0
AJ299405_1(AJ299405|pid:none) Mus musculus mRNA for microtubule ... 40 0.86
(Q8BV66) RecName: Full=Interferon-induced protein 44; AltName: F... 40 0.86
BX293980_294(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 38 2.5
CP000627_2468(CP000627|pid:none) Vibrio cholerae O395 chromosome... 38 3.3
AY249914_1(AY249914|pid:none) Coxiella burnetii strain Henzerlin... 38 3.3
AY249913_1(AY249913|pid:none) Coxiella burnetii strain Xinqiao 3... 38 3.3
CP001019_1711(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 38 3.3
AE003852_168(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 38 3.3
CP000510_540(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 38 3.3
CP000733_1824(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 38 3.3
BC160745_1(BC160745|pid:none) Xenopus laevis hypothetical protei... 37 4.3
CR378663_83(CR378663|pid:none) Photobacterium profundum SS9; seg... 37 7.3
(Q7A5Q9) RecName: Full=Putative oligopeptide transport ATP-bindi... 36 9.5
AY849931_1(AY849931|pid:none) Escherichia coli strain REL606 Nad... 36 9.5
(Q54U65) RecName: Full=Seven transmembrane domain-containing ser... 36 9.5
CU468135_674(CU468135|pid:none) Erwinia tasmaniensis strain ET1/... 36 9.5

>AC116305_17(AC116305|pid:none) Dictyostelium discoideum chromosome 2
map 1005175-1418323 strain AX4, complete sequence.
Length = 690

Score = 721 bits (1861), Expect = 0.0
Identities = 383/694 (55%), Positives = 483/694 (69%), Gaps = 1/694 (0%)
Frame = +1

Query: 100 RHALKTEIKTVFNSDSGVTYFSILIETSSKMSLYNVIIKTFITQLQKANRECQIQIITYG 279
R ALKTEIK++ N +S YFSIL+E + M+LYNV IKTFI LQK +E +IQIITY
Sbjct: 5 RQALKTEIKSLQNVESDKLYFSILVENTLNMALYNVSIKTFIQNLQKTQKESEIQIITYN 64

Query: 280 DSVNTIFEFDSEPNELKDSLKEIKFSKDNEEAKLGEAMRMCFNNIESNWSSDLMSKXXXX 459
+ V IFEFD +P L+DS+KEIKFSK + +A G A++ C+ NIES S +S
Sbjct: 65 EEVLQIFEFDQQPILLRDSIKEIKFSKTSNQANFGLALQECYKNIESFRSDTSISNIIIF 124

Query: 460 XXXXXXXXXXXXXXXXXXXXNNSIYGLAGCNLANKSSDEAVKDLQSLLPDQKVIPLGKNP 639
NN IYG+AGC +E VK+LQ+LLPD VIP KNP
Sbjct: 125 SSGISSDDSSDGLVEIMSLENNFIYGIAGCG------EEGVKNLQTLLPDIVVIPFSKNP 178

Query: 640 SQDIRLLMXXXXXXXXXXXXXXXXSSSDEHSINCPVNIEVYPHTNETKSIKDDLLLDVVI 819
S+DI L+ +S SINCP+NIEV+PH+NET+SIKDDL LD+V+
Sbjct: 179 SKDISNLLKSSDL-----------NSEQGSSINCPINIEVFPHSNETQSIKDDLYLDIVL 227

Query: 820 KPDGNTASVPSGTKIKFLSNKYYSGYTIQLKQNLVFGEPYEETIKLEFKKGQMKKTQFEN 999
KPDGNT+ +PSG+KIKFL +KYYSGYTIQ+K +++FG PYEETI+L++KKGQ++K+Q++N
Sbjct: 228 KPDGNTSCIPSGSKIKFLPSKYYSGYTIQIKNDILFGHPYEETIRLDYKKGQIEKSQYQN 287

Query: 1000 FPSKIIFHIELANDRDNVHEGFVALNISYFLGELKSKYRCCIGVEGEIGNGKSTCLNGFV 1179
FPS I F+IEL ND++N+ EGF+ LNI YFLG+LKSKYR IGVEG IGNGKSTCLNGFV
Sbjct: 288 FPSHIEFNIELFNDKENIIEGFIWLNICYFLGDLKSKYRVSIGVEGGIGNGKSTCLNGFV 347

Query: 1180 NLFNPVGELEEYFNANRTSGTHVTTSINNTSLKEILSAKHYIHPVQESFHDIDIAWSDSW 1359
NLFNP + EYF ANR++G HVT S++ TSLKEIL +K+ IHPVQESF DIDI W+D+W
Sbjct: 348 NLFNPTFDFVEYFIANRSNGDHVTRSVDCTSLKEILQSKYDIHPVQESFKDIDIVWTDTW 407

Query: 1360 GFVDTDVQLRHKAEGRIHHGVSKNNCIVQQPLDRYRVDCFIFVVSIRSFGDKDSMAKIEK 1539
GFVDTDV+L+HKAEGRIHHG SKN+C++Q P + YR+DCFIFVVSIR+F D +M+KIEK
Sbjct: 408 GFVDTDVELKHKAEGRIHHGTSKNDCLIQLPNEEYRIDCFIFVVSIRNFNDATAMSKIEK 467

Query: 1540 KIREVIDMGITPLLAITFVDALSKNQFQELIRTRGELSVQESNTFIINNYTEKETHRDIS 1719
KI+EVI +GITPL+AITFVD+L+KN FQEL+ ELS+Q+SNTFIINNYTE ET +DIS
Sbjct: 468 KIQEVIKVGITPLMAITFVDSLTKNVFQELLNKVNELSIQKSNTFIINNYTENETTKDIS 527

Query: 1720 KDIQYLRLLTKAVQLCKILKEKQAMNKLKALSIDENNNPTPVKNQQPSSFFGECSSTFTS 1899
KDIQYLRLLTKAVQLCKI EK + + K ++N N P K+ + +SF + S
Sbjct: 528 KDIQYLRLLTKAVQLCKIKNEKDLITQSK----NQNQNLAPSKSNE-TSFLQSTINNIIS 582

Query: 1900 PNKSFQSPMTGSPMQTRQSETXXXXXXXXXXISLPINVTVDVVPDAQG-TILTSFEIEAN 2076
P K T P+ + + +T I VT+D++ D L +FEIEA
Sbjct: 583 PIK---HTTTKQPIFSIEPKT--------------ITVTIDIIQDINSEKFLQTFEIEAI 625

Query: 2077 LNETISELKNRLXXXXXXXXXXXXWSLTKENGTI 2178
L+ T ELK+ L W+LTKENGTI
Sbjct: 626 LDHTFLELKDILRNEIDPNINISDWNLTKENGTI 659

Score = 166 bits (419), Expect(2) = 1e-70
Identities = 81/116 (69%), Positives = 102/116 (87%)
Frame = +2

Query: 2747 YRIDCFIFVVSIRNFTNPASMQRIEKKIKEVLQMNITPLLAITFSDTLSKNQLQDVMKNK 2926
YRIDCFIFVVSIRNF + +M +IEKKI+EV+++ ITPL+AITF D+L+KN Q+++ NK
Sbjct: 442 YRIDCFIFVVSIRNFNDATAMSKIEKKIQEVIKVGITPLMAITFVDSLTKNVFQELL-NK 500

Query: 2927 VAELSVQESNTFIISNYTEKETHKDISKDVQYLRLLTKAVQLCKVKNEKDIMNKVK 3094
V ELS+Q+SNTFII+NYTE ET KDISKD+QYLRLLTKAVQLCK+KNEKD++ + K
Sbjct: 501 VNELSIQKSNTFIINNYTENETTKDISKDIQYLRLLTKAVQLCKIKNEKDLITQSK 556

Score = 127 bits (320), Expect(2) = 1e-70
Identities = 59/89 (66%), Positives = 73/89 (82%)
Frame = +1

Query: 2494 EYFNANRTSGTHVTTSINNTSLKEILSAKHYIHPVQESFHDIDIAWSDXWGFVDTDVQLR 2673
EYF ANR++G HVT S++ TSLKEIL +K+ IHPVQESF DIDI W+D WGFVDTDV+L+
Sbjct: 358 EYFIANRSNGDHVTRSVDCTSLKEILQSKYDIHPVQESFKDIDIVWTDTWGFVDTDVELK 417

Query: 2674 HKAEGRIHHGTKKDECTILQPDDRLSYRL 2760
HKAEGRIHHGT K++C I P++ YR+
Sbjct: 418 HKAEGRIHHGTSKNDCLIQLPNE--EYRI 444

Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/74 (51%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +2

Query: 3332 KTINVTIDVVTD-SSGTVLTSFEIESSTNESVSELKCKLINEIDPEMNANDWSITKESGT 3508
KTI VTID++ D +S L +FEIE+ + + ELK L NEIDP +N +DW++TKE+GT
Sbjct: 599 KTITVTIDIIQDINSEKFLQTFEIEAILDHTFLELKDILRNEIDPNINISDWNLTKENGT 658

Query: 3509 VLFESARLSSIIKS 3550
+L +S++LSSI K+
Sbjct: 659 ILLDSSKLSSICKN 672

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 4,805,363,959
Number of extensions: 89025015
Number of successful extensions: 247223
Number of sequences better than 10.0: 17
Number of HSP's gapped: 247104
Number of HSP's successfully gapped: 20
Length of query: 1268
Length of database: 1,051,180,864
Length adjustment: 141
Effective length of query: 1127
Effective length of database: 594,826,045
Effective search space: 670368952715
Effective search space used: 670368952715
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.27 gvh: 0.30 alm: 0.60 top: 0.53 tms: 0.00 mit: 0.24 mip: 0.00
nuc: 0.20 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.50 vac: 0.00 rnp: 0.00
act: 0.00 caa: 1.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

28.0 %: nuclear
24.0 %: plasma membrane
20.0 %: cytoplasmic
8.0 %: extracellular, including cell wall
8.0 %: Golgi
8.0 %: vesicles of secretory system
4.0 %: mitochondrial

>> prediction for Contig-U15679-1 is nuc

VS (DIR, S) 0
VH (FL, L) 4
VF (FL, S) 0
AH (FL, L) 83
AF (FL, S) 9
SL (DIR, L) 1
SS (DIR, S) 5
SH (FL, L) 7
SF (FL, S) 5
CH (FL, L) 29
CF (FL, S) 3
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0