Contig-U15678-1 |
Contig ID |
Contig-U15678-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
gap included |
Contig length |
2470 |
Chromosome number (1..6, M) |
- |
Chromosome length |
- |
Start point |
- |
End point |
- |
Strand (PLUS/MINUS) |
- |
Number of clones |
48 |
Number of EST |
78 |
Link to clone list |
U15678 |
List of clone(s) |
est1=SFF608F,1,116 est2=AFO838F,16,142 est3=FC-AL12F,34,341 est4=SLH329F,45,333 est5=SSJ504F,165,787 est6=SSB293F,440,928 est7=AFG225Z,929,1462 est8=AFI466F,929,934 est9=AFK259Z,929,1471 est10=AFL235Z,929,1313 est11=AFO592F,929,1394 est12=AFO838Z,929,1471 est13=SFF608Z,929,1453 est14=SLC230Z,929,1507 est15=SLH329Z,929,1499 est16=SSH374Z,929,1535 est17=SFG731F,944,1533 est18=SFH304F,945,1564 est19=FC-BD13Z,955,1583 est20=AFG254F,961,1564 est21=CFA358F,961,1483 est22=SFH693F,961,1511 est23=AFA765F,964,1589 est24=AFG109F,964,1588 est25=VFJ314F,964,1532 est26=VFC566F,967,1616 est27=AFE693F,969,1592 est28=CHC196F,970,1540 est29=SFK731F,971,1518 est30=VHG213F,971,1572 est31=VHG213Z,971,1526 est32=VFE235F,973,1588 est33=AFG603F,976,1642 est34=VFE412F,976,1591 est35=SFK277F,977,1588 est36=VFB655F,986,1590 est37=FC-AL12Z,990,1579 est38=FC-AZ18Z,991,1579 est39=AFL290F,1000,1530 est40=CFJ348F,1000,1460 est41=AFA521F,1002,1438 est42=SSJ504Z,1005,1501 est43=SLI186F,1007,1229 est44=AFI466Z,1012,1448 est45=SLI838Z,1021,1512 est46=SLK677Z,1034,1506 est47=SLD425E,1072,1535 est48=SSJ612E,1093,1511 est49=AFA621F,1104,1439 est50=AFC569F,1106,1435 est51=AFC646F,1166,1649 est52=SSG708E,1206,2381 est53=SLJ738Z,1217,1512 est54=SLD538Z,1308,1535 est55=AFC569Z,1585,2375 est56=VFC566Z,1586,2378 est57=VFD640Z,1594,2382 est58=AFO592Z,1596,2335 est59=AFE693Z,1610,2376 est60=SFK731Z,1613,2377 est61=AFG109Z,1614,2362 est62=VFE412Z,1615,2378 est63=VFE235Z,1654,2311 est64=CFJ348Z,1656,2375 est65=SFH304Z,1663,2376 est66=VFB655Z,1672,2366 est67=SFG731Z,1673,2374 est68=AFA521Z,1674,2312 est69=AFA621Z,1680,2312 est70=AFA765Z,1683,2377 est71=VFJ314Z,1683,2330 est72=AFL290Z,1721,2311 est73=CFA358Z,1724,2305 est74=AFG254Z,1767,2312 est75=AFC646Z,1829,2351 est76=CHC196Z,1834,2345 est77=SLI186Z,1963,2469 est78=AFG603Z,2083,2312
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 2. 6 |
Homology vs DNA |
Query= Contig-U15678-1 (Contig-U15678-1Q) /CSM_Contig/Contig-U15678-1Q.Seq.d (2480 letters)
Database: ddbj_B 98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ346739) Dictyostelium discoideum cDNA clone:dda24j23, 3' ... 1366 0.0 3 (BJ339899) Dictyostelium discoideum cDNA clone:dda10i24, 3' ... 1296 0.0 4 (BJ342224) Dictyostelium discoideum cDNA clone:dda13a03, 3' ... 1291 0.0 5 (DQ309430) Dictyostelium discoideum COP9 signalosome complex... 1289 0.0 3 (BJ430867) Dictyostelium discoideum cDNA clone:ddv9h04, 3' e... 1289 0.0 4 (BJ430226) Dictyostelium discoideum cDNA clone:ddv6c17, 3' e... 1289 0.0 6 (BJ347574) Dictyostelium discoideum cDNA clone:dda27b16, 3' ... 1289 0.0 2 (BJ401188) Dictyostelium discoideum cDNA clone:dds22n07, 3' ... 1285 0.0 3 (BJ341428) Dictyostelium discoideum cDNA clone:dda6i17, 3' e... 1281 0.0 4 (BJ430928) Dictyostelium discoideum cDNA clone:ddv9e10, 3' e... 1245 0.0 2 (BJ340438) Dictyostelium discoideum cDNA clone:dda2i06, 3' e... 1235 0.0 1 (BJ400848) Dictyostelium discoideum cDNA clone:dds15h01, 3' ... 1231 0.0 3 (BJ375649) Dictyostelium discoideum cDNA clone:ddc19p11, 3' ... 1231 0.0 2 (BJ340437) Dictyostelium discoideum cDNA clone:dda2i05, 3' e... 1209 0.0 1 (BJ400711) Dictyostelium discoideum cDNA clone:dds14n07, 3' ... 1203 0.0 4 (BJ340521) Dictyostelium discoideum cDNA clone:dda2b17, 3' e... 1197 0.0 3 (BJ429724) Dictyostelium discoideum cDNA clone:ddv4m14, 3' e... 1195 0.0 3 (BJ432595) Dictyostelium discoideum cDNA clone:ddv19l03, 3' ... 1191 0.0 2 (C89966) Dictyostelium discoideum slug cDNA, clone SSG708. 1130 0.0 2 (BJ345462) Dictyostelium discoideum cDNA clone:dda23c24, 3' ... 1110 0.0 2 (BJ325361) Dictyostelium discoideum cDNA clone:dda14e02, 5' ... 1078 0.0 1 (BJ346412) Dictyostelium discoideum cDNA clone:dda30g23, 3' ... 823 0.0 3 (BJ430719) Dictyostelium discoideum cDNA clone:ddv8o10, 3' e... 714 0.0 3 (BJ371795) Dictyostelium discoideum cDNA clone:ddc1d15, 3' e... 1080 0.0 2 (BJ411974) Dictyostelium discoideum cDNA clone:ddv6c17, 5' e... 1051 0.0 1 (BJ342360) Dictyostelium discoideum cDNA clone:dda13k14, 3' ... 987 0.0 2 (BJ412578) Dictyostelium discoideum cDNA clone:ddv9h04, 5' e... 1001 0.0 1 (BJ411495) Dictyostelium discoideum cDNA clone:ddv4m14, 5' e... 999 0.0 1 (BJ412631) Dictyostelium discoideum cDNA clone:ddv9e10, 5' e... 995 0.0 1 (BJ390284) Dictyostelium discoideum cDNA clone:dds21i20, 5' ... 995 0.0 1 (BJ341376) Dictyostelium discoideum cDNA clone:dda6k12, 3' e... 908 0.0 2 (BJ325151) Dictyostelium discoideum cDNA clone:dda13a03, 5' ... 991 0.0 1 (BJ323492) Dictyostelium discoideum cDNA clone:dda10i24, 5' ... 991 0.0 1 (BJ325827) Dictyostelium discoideum cDNA clone:dda2b17, 5' e... 860 0.0 3 (BJ391103) Dictyostelium discoideum cDNA clone:dds15h01, 5' ... 948 0.0 2 (BJ325281) Dictyostelium discoideum cDNA clone:dda13k14, 5' ... 946 0.0 2 (BJ324454) Dictyostelium discoideum cDNA clone:dda6k12, 5' e... 914 0.0 2 (BJ390964) Dictyostelium discoideum cDNA clone:dds14n07, 5' ... 886 0.0 2 (BJ363488) Dictyostelium discoideum cDNA clone:ddc26o23, 5' ... 892 0.0 1 (BJ414436) Dictyostelium discoideum cDNA clone:ddv19l03, 5' ... 884 0.0 1 (BJ328324) Dictyostelium discoideum cDNA clone:dda23c24, 5' ... 878 0.0 1 (BJ390440) Dictyostelium discoideum cDNA clone:dds22n07, 5' ... 856 0.0 1 (BJ388943) Dictyostelium discoideum cDNA clone:dds16i24, 5' ... 842 0.0 2 (BJ378061) Dictyostelium discoideum cDNA clone:ddc26o23, 3' ... 793 0.0 2 (BJ329410) Dictyostelium discoideum cDNA clone:dda24j23, 5' ... 787 0.0 2 (BJ358433) Dictyostelium discoideum cDNA clone:ddc1d15, 5' e... 787 0.0 2 (AU053230) Dictyostelium discoideum slug cDNA, clone SLI186. 636 0.0 2 (BJ330138) Dictyostelium discoideum cDNA clone:dda27b16, 5' ... 755 0.0 2 (AJ786025) Dictyostelium discoideum mRNA for VASP protein. 672 0.0 1 (BJ361955) Dictyostelium discoideum cDNA clone:ddc19p11, 5' ... 670 0.0 1 (BJ440251) Dictyostelium discoideum cDNA clone:ddv43i04, 3' ... 664 0.0 1 (BJ421568) Dictyostelium discoideum cDNA clone:ddv43i04, 5' ... 664 0.0 1 (BJ329114) Dictyostelium discoideum cDNA clone:dda30g23, 5' ... 581 e-167 3 (BJ325754) Dictyostelium discoideum cDNA clone:dda2i05, 5' e... 561 e-155 1 (BJ325755) Dictyostelium discoideum cDNA clone:dda2i06, 5' e... 527 e-145 1 (BJ324502) Dictyostelium discoideum cDNA clone:dda6i17, 5' e... 523 e-143 1 (AU073337) Dictyostelium discoideum slug cDNA, clone SSG708. 470 e-127 1 (BJ326671) Dictyostelium discoideum cDNA clone:dda17d18, 5' ... 430 e-115 1 (BJ342449) Dictyostelium discoideum cDNA clone:dda14e02, 3' ... 383 e-109 2 (AU074092) Dictyostelium discoideum slug cDNA, clone SSJ504. 145 1e-77 4 (AU062185) Dictyostelium discoideum slug cDNA, clone SLI186. 283 2e-71 1 (AU062043) Dictyostelium discoideum slug cDNA, clone SLH329. 113 4e-64 4 (C22971) Dictyostelium discoideum gamete cDNA, clone FC-AL12. 113 1e-59 5 (FF337127) 280463803 Pea aphid whole body normalized full le... 76 8e-33 4 (GE559846) CCHT17903.b1_M12.ab1 CCHT Niger Seed Guizotia aby... 60 7e-32 8 (EF144208) Populus trichocarpa clone PX0011_D04 unknown mRNA. 50 6e-31 8 (EX939975) lb74c05.g1 Ginkgo ovule (NYBG) Ginkgo biloba cDNA... 74 1e-30 6 (EL348139) CCEL4280.b1_O13.ab1 CCE(LMS) endive Cichorium end... 60 3e-30 7 (FF316243) 280377299 Pea aphid whole body normalized full le... 76 4e-28 4 (CQ717165) Sequence 3099 from Patent WO02068579. 66 7e-28 5 (EH693416) CCIM544.b1_P15.ab1 CCI(LMS) chicory Cichorium int... 52 8e-28 7 (BG667282) DRABJB04 Rat DRG Library Rattus norvegicus cDNA c... 74 8e-28 5 (EX633756) 256591452 Pea aphid whole body normalized full le... 76 5e-26 3 (AW231135) uo40a01.y1 NCI_CGAP_Lu29 Mus musculus cDNA clone ... 66 2e-25 4 (FM090666) Rattus norvegicus EST, 5'-end sequence, clone etn... 66 2e-25 4 (EX628094) 255448531 Pea aphid whole body normalized full le... 74 2e-25 3 (EL455158) CHTM7799.b1_N05.ab1 CHT(LMS) Jerusalem artichoke ... 52 2e-25 7 (BG663876) DRAAAOG05 Rat DRG Library Rattus norvegicus cDNA ... 66 8e-25 4 (FM100508) Rattus norvegicus EST, 5'-end sequence, clone etn... 66 3e-24 4 (FC288217) CAGN4339.fwd CAGN Nematostella vectensis Nemve mi... 62 4e-24 5 (EE080173) S2B22029 Buds (VvS2) Vitis vinifera cDNA clone S2... 60 5e-24 6 (CO394580) AGENCOURT_26728725 NIH_MGC_255 Rattus norvegicus ... 66 6e-24 4 (EE627007) CHWS5286.b1_L02.ab1 CHW(LMS) silverleaf sunflower... 48 6e-24 7 (EE619801) CHWM703.b1_N08.ab1 CHW(LMS) silverleaf sunflower ... 48 8e-24 7 (DY553723) AGENCOURT_70350387 NIH_MGC_368 Rattus norvegicus ... 58 8e-24 5 (FM093034) Rattus norvegicus EST, 5'-end sequence, clone etn... 66 8e-24 4 (CN287015) 17000600026583 GRN_PREHEP Homo sapiens cDNA 5', m... 60 9e-24 4 (EV235619) VV_PEb21d04.b1 Vitis vinifera cv. perlette LibB V... 60 1e-23 6 (FF317070) 280389557 Pea aphid whole body normalized full le... 68 1e-23 3 (CN287008) 17000600173756 GRN_PREHEP Homo sapiens cDNA 5', m... 60 1e-23 4 (DY390908) CL__Eb0004K24.f CL__Eb Curcuma longa cDNA clone C... 54 1e-23 5 (AY133536) Arabidopsis thaliana At2g26990/T20P8.4 mRNA, comp... 56 2e-23 7 (BP315836) Homo sapiens cDNA clone: OFR09487, Sugano cDNA li... 60 3e-23 4 (DA190204) Homo sapiens cDNA clone BRAMY3012503, 5' end, mRN... 60 3e-23 4 (FM051925) Rattus norvegicus EST, 5'-end sequence, clone etc... 66 3e-23 3 (FM123157) Rattus norvegicus EST, 5'-end sequence, clone etn... 66 3e-23 3 (FM102099) Rattus norvegicus EST, 5'-end sequence, clone etn... 66 3e-23 3 (CO404422) AGENCOURT_26755127 NIH_MGC_255 Rattus norvegicus ... 66 4e-23 3 (CV076580) AGENCOURT_31475358 NIH_MGC_251 Rattus norvegicus ... 66 4e-23 3 (FF299397) 279329669 Pea aphid whole body normalized full le... 66 5e-23 3 (CU456107) Homo sapiens ORESTES from keratinocytes. 60 5e-23 4 (CO393114) AGENCOURT_27849529 NIH_MGC_252 Rattus norvegicus ... 66 5e-23 3 (CO397216) AGENCOURT_26728718 NIH_MGC_255 Rattus norvegicus ... 66 5e-23 3 (AY087622) Arabidopsis thaliana clone 37160 mRNA, complete s... 50 7e-23 8 (AY050437) Arabidopsis thaliana At2g26990/T20P8.4 mRNA, comp... 56 7e-23 7 (DW087197) CLPY10686.b1_L08.ab1 CLP(XYZ) lettuce perennis La... 82 7e-23 3 (BF790438) 602249696F1 NIH_MGC_81 Homo sapiens cDNA clone IM... 60 7e-23 4 (CU454340) Homo sapiens ORESTES from keratinocytes. 60 7e-23 4 (BU945627) AGENCOURT_10545660 NIH_MGC_127 Homo sapiens cDNA ... 60 8e-23 4 (AB081072) Rattus norvegicus Trip15 mRNA for Thyroid recepto... 66 8e-23 4 (BU198860) DCBCSE07 DCB Homo sapiens cDNA, mRNA sequence. 60 8e-23 4 (DR760789) HESC4_120_D09.g1_A037 NIH_MGC_262 Homo sapiens cD... 60 8e-23 4 (BU172345) AGENCOURT_7977747 NIH_MGC_72 Homo sapiens cDNA cl... 60 8e-23 4 (BG289019) 602381286F1 NIH_MGC_93 Homo sapiens cDNA clone IM... 60 1e-22 4 (EW777303) ST050001000E05 Normalized and subtracted western ... 76 1e-22 3 (BX370724) human full-length cDNA 5-PRIME end of clone CS0DL... 62 1e-22 4 (CN645694) ILLUMIGEN_MCQ_24743 Katze_MMPL2 Macaca mulatta cD... 60 1e-22 4 (EW761428) ST020014B20H04 Normalized and subtracted western ... 76 1e-22 3 (CF207924) CAB20002_IVa_Fa_G07 Cabernet Sauvignon Flower blo... 60 2e-22 5 (CU680379) Synthetic construct Homo sapiens gateway clone IM... 60 2e-22 4 (BU748182) CH3#018_D03T7 Canine heart normalized cDNA Librar... 60 2e-22 4 (CR542063) Homo sapiens full open reading frame cDNA clone R... 60 3e-22 4 (BJ387067) Dictyostelium discoideum cDNA clone:dds12o02, 5' ... 92 3e-22 2 (AB462991) Synthetic construct DNA, clone: pF1KB5316, Homo s... 60 3e-22 4 (AW295381) UI-H-BI2-ahv-f-08-0-UI.s1 NCI_CGAP_Sub4 Homo sapi... 60 3e-22 3 (EU446744) Synthetic construct Homo sapiens clone IMAGE:1000... 60 3e-22 4 (EU831553) Synthetic construct Homo sapiens clone HAIB:10006... 60 3e-22 4 (EU831466) Synthetic construct Homo sapiens clone HAIB:10006... 60 3e-22 4 (DA967854) Homo sapiens cDNA clone STOMA2006558, 5' end, mRN... 60 4e-22 3 (BP290215) Homo sapiens cDNA clone: LNF04362, Sugano cDNA li... 60 4e-22 3 (BP378178) Homo sapiens cDNA clone: WMD00944, Sugano cDNA li... 60 4e-22 3 (BM722591) UI-E-EO0-ahy-f-22-0-UI.r1 UI-E-EO0 Homo sapiens c... 60 4e-22 3 (DB171156) Homo sapiens cDNA clone TKIDN2005984, 5' end, mRN... 60 4e-22 3 (BU023518) QHF11I04.yg.ab1 QH_EFGHJ sunflower RHA280 Heliant... 52 4e-22 7 (AK295598) Homo sapiens cDNA FLJ52928 complete cds, highly s... 60 5e-22 4 (EH682905) CCIL7593.b1_B04.ab1 CCI(LMS) chicory Cichorium in... 54 6e-22 5 (CR604522) full-length cDNA clone CS0DL010YH09 of B cells (R... 60 7e-22 4 (CR601131) full-length cDNA clone CS0DA011YC02 of Neuroblast... 60 7e-22 4 (BC012629) Homo sapiens COP9 constitutive photomorphogenic h... 60 8e-22 4 (DV128156) CV03050A1G11.f1 CV03-normalized library Euphorbia... 56 8e-22 4 (CR614722) full-length cDNA clone CS0DI070YA02 of Placenta C... 60 9e-22 4 (DN888526) nag15f09.y1 Rabbit eye minus lens and cornea. Unn... 66 9e-22 4 (CQ730469) Sequence 16403 from Patent WO02068579. 60 9e-22 4 (CS350877) Sequence 261 from Patent WO2006013561. 60 9e-22 4 (CQ981244) Sequence 99 from Patent EP1498424. 60 9e-22 4 (AF084260) Homo sapiens signalosome subunit 2 (SGN2) mRNA, c... 60 9e-22 4 (AB209799) Homo sapiens mRNA for COP9 constitutive photomorp... 60 9e-22 4 (AF100762) Homo sapiens thyroid receptor interactor trip15 m... 60 9e-22 4 (AF212227) Homo sapiens TRIP15-ISO mRNA, complete cds. 60 1e-21 4 (BD310404) Human prostate cancer associated gene sequences a... 60 1e-21 4 (AB169606) Macaca fascicularis brain cDNA, clone: QnpA-16974... 60 1e-21 4 (AF395058) Arabidopsis thaliana CSN complex subunit 2 (CSN2)... 50 1e-21 7 (BX438344) human full-length cDNA 5-PRIME end of clone CS0DA... 60 1e-21 3 (EW592332) rssp13_p7.y1 ssp Sus scrofa cDNA 5', mRNA sequence. 60 1e-21 4 (GE547651) CCHS652.b1_G20.ab1 CCHS Espina Barnadesia spinosa... 54 3e-21 4 (FF600538) Le_emcl1_01E17_M13Reverse Little Skate (Leucoraja... 76 3e-21 5 (AF120268) Homo sapiens ALIEN (ALIEN) mRNA, complete cds. 60 4e-21 4 (FE022482) C0009255F06.P1KAM13F KN511 Ovis aries efferent ga... 54 4e-21 4 (EE779838) 020502OMGB11013064HT OMGB1 Ovis aries cDNA, mRNA ... 54 4e-21 4 (AK312643) Homo sapiens cDNA, FLJ93029, highly similar to Ho... 60 4e-21 4 (EL435006) CHTL2894.b2_K04.ab1 CHT(LMS) Jerusalem artichoke ... 48 6e-21 8 (DV690269) CGN-33602 Leaf Coffea canephora cDNA clone cccl9l... 46 7e-21 6 (CX168169) E07_69-12_09.ab1 leaf inoculated with Marssonia p... 50 1e-20 5 (CU453714) Homo sapiens ORESTES from keratinocytes. 60 1e-20 4 (BX822049) Arabidopsis thaliana Full-length cDNA Complete se... 50 1e-20 7 (AJ725171) Gallus gallus EST, clone 29h3r2. 62 1e-20 6 (DW075138) CLPX10894.b1_L11.ab1 CLP(XYZ) lettuce perennis La... 74 1e-20 3 (BC023096) Mus musculus COP9 (constitutive photomorphogenic)... 66 1e-20 4 (AB093651) Macaca fascicularis brain cDNA clone:QflA-22181, ... 60 1e-20 3 (EF468514) Sus scrofa COP9 constitutive photomorphogenic-lik... 60 2e-20 4 (DV558580) EST02070 venom gland cDNA library Deinagkistrodon... 68 2e-20 4 (CO859010) LM_SL5_004412 Locusta migratoria solitarious phas... 80 2e-20 3 (DR689639) EST1079725 Normalized pine embryo library, Lib_D ... 66 3e-20 4 (EH692641) CCIM4734.b1_L07.ab1 CCI(LMS) chicory Cichorium in... 52 3e-20 5 (DT635520) EST1150451 Normalized pine embryo library, Lib_D ... 66 4e-20 4 (DT213455) E014_F01 Embryogenic SSH library Cichorium intybu... 60 5e-20 5 (CF249567) esa001_c04 Eimeiria tenella-infected caecal tonsi... 62 5e-20 5 (DW162179) CLVY14148.b1_H10.ab1 CLV(XYZ) lettuce virosa Lact... 54 6e-20 5 (EE857766) 020731OSTA127009HT OSTA Ovis aries cDNA, mRNA seq... 54 6e-20 4 (FC250485) CAGH6384.fwd CAGH Nematostella vectensis Nemve La... 62 6e-20 4 (DR417084) gPGC_EST06926 Embryonic gonadal PGC cDNA Library ... 70 6e-20 4 (EW387492) rmed18c_h19.y1 med Sus scrofa cDNA 5', mRNA seque... 56 7e-20 4 (AJ441848) Gallus gallus EST, clone library dkfz426, clone 1... 62 7e-20 5 (DA468475) Homo sapiens cDNA clone D9OST2000497, 5' end, mRN... 60 7e-20 4 (DR429560) nax18h07.y1 Chicken eye (embryo). Unnormalized (n... 62 7e-20 5 (AY609422) Sus scrofa clone Clu_11038.scr.msk.p1.Contig1, mR... 60 9e-20 4 (DR429497) nax17g11.y1 Chicken eye (embryo). Unnormalized (n... 62 1e-19 5 (EC388886) F07_F07gm2o14_pDNRf_491065 Myzus persicae, line G... 58 1e-19 3 (EE570740) A04_A04fv3i7_pDNRf_531152 Myzus persicae, line F0... 58 1e-19 5 (DY967879) CLSM18968.b1_P13.ab1 CLS(LMS) lettuce sativa Lact... 52 2e-19 5 (AK222590) Homo sapiens mRNA for COP9 constitutive photomorp... 60 2e-19 4 (DB855358) Nilaparvata lugens mRNA, EST clone:NLNA8390, 5' e... 70 2e-19 4 (AL518661) human full-length cDNA 5-PRIME end of clone CS0DA... 60 3e-19 3 (AJ947914) Sus scrofa EST, clone C0007738p12, 5' direction. 60 6e-19 4 (AC219962) Bos taurus clone CH240-317G15, WORKING DRAFT SEQU... 48 7e-19 4 (AM488774) Vitis vinifera contig VV78X267795.15, whole genom... 60 8e-19 8 (BC114035) Bos taurus COP9 constitutive photomorphogenic hom... 48 8e-19 4 (CU654096) ovine foetal ovary tissues (Prophase I meiosis) -... 54 8e-19 4 (EE358656) LB02964.CR_A05 GC_BGC-29 Bos taurus cDNA clone IM... 48 8e-19 4 (CN787122) 4121204 BARC 8BOV Bos taurus cDNA clone 8BOV_34K1... 48 9e-19 4 (CB220876) 1Abo27D11 Bos taurus Abomasum #1 library Bos taur... 48 9e-19 4 (AW464516) BP230016A10B9 Soares normalized bovine placenta B... 48 9e-19 4 (AL552449) human full-length cDNA 5-PRIME end of clone CS0DI... 60 9e-19 3 (AU268982) Dictyostelium discoideum vegetative cDNA clone:VS... 86 1e-18 2 (BX272479) Gallus gallus multi-tissues normalized and once-s... 62 1e-18 4 (DW157917) CLVY10021.b1_I09.ab1 CLV(XYZ) lettuce virosa Lact... 48 1e-18 6 (DN384465) LIB38541_002_D03_SP6_1 LIB38541 Canis lupus famil... 54 2e-18 4 (AJ441718) Gallus gallus EST, clone library dkfz426, clone 1... 62 2e-18 4 (BC061864) Rattus norvegicus COP9 (constitutive photomorphog... 66 2e-18 4 (AJ444686) Gallus gallus EST, clone library dkfz426, clone 4... 62 2e-18 4 (AV508813) Mus musculus cDNA, Abe mouse ES cell cDNA library... 66 2e-18 3 (AI591764) vs32c03.y1 Stratagene mouse Tcell 937311 Mus musc... 66 3e-18 3 (AJ720904) Gallus gallus mRNA for hypothetical protein, clon... 62 3e-18 6 (AA215197) mu83h10.r1 Stratagene mouse melanoma (#937312) Mu... 66 3e-18 3 (CD855006) DH0AMM37ZG12ZZM1 HaDevR6 Helianthus annuus cDNA c... 52 3e-18 4 (DV657158) DS150B_G07 Eppig Hampl Solter fully-grown mouse o... 66 4e-18 3 (CF908853) A0528G08-5 NIA Mouse Mesenchymal Stem Cell cDNA L... 66 4e-18 3 (CA569723) K0446F05-5N NIA Mouse Mesenchymal Stem Cell cDNA ... 66 5e-18 3 (BG803780) 0241-75 Mouse E14.5 retina lambda ZAP II Library ... 66 5e-18 3 (BU104612) 603006083F1 CSEQCHL01 Gallus gallus cDNA clone Ch... 62 5e-18 4 (DV453089) CV02012A1B03.f1 CV02-normalized library Manihot e... 56 5e-18 5 (CX244072) NMA01885 Mus Musculus Lateral Ventricle Wall C57B... 66 5e-18 3 (CN692421) E0322F05-5 NIA Mouse E10.5 whole embryo cDNA libr... 66 5e-18 3 (CN703789) E0480A01-5 NIA Mouse E11.5 whole embryo cDNA libr... 66 5e-18 3 (EL399952) CFFS11293.b1_J15.ab1 CFF(LMS) safflower Carthamus... 52 7e-18 7 (GE503956) CCFT4070.g1_K10.ab1 CCF(STU) sunflower Helianthus... 52 8e-18 4 (BE861650) UI-M-AO1-aem-a-11-0-UI.r1 NIH_BMAP_MPG_N Mus musc... 66 8e-18 3 (CN528237) UI-M-HQ0-cpg-k-15-0-UI.r1 NIH_BMAP_HQ0 Mus muscul... 66 9e-18 3 (DV649373) DS051C_C10 Eppig Hampl Solter fully-grown mouse o... 66 9e-18 3 (DW162406) CLVY14360.b1_P13.ab1 CLV(XYZ) lettuce virosa Lact... 48 9e-18 5 (BU520508) AGENCOURT_10153315 NIH_MGC_134 Mus musculus cDNA ... 66 1e-17 3 (DW151334) CLVX3201.b1_B09.ab1 CLV(XYZ) lettuce virosa Lactu... 54 1e-17 6 (BQ923130) AGENCOURT_8933909 NCI_CGAP_Mam2 Mus musculus cDNA... 66 1e-17 3 (BP292030) Homo sapiens cDNA clone: LNG03053, Sugano cDNA li... 60 2e-17 3 (AK252791) Hordeum vulgare subsp. vulgare cDNA clone: FLbaf1... 62 2e-17 6 (EE571061) C10_C10fv4n19_pDNRf_531682 Myzus persicae, line F... 58 3e-17 5 (DW163474) CLVY1983.b1_M15.ab1 CLV(XYZ) lettuce virosa Lactu... 48 3e-17 5 (FF379722) CASL114TF CASL Manihot esculenta cDNA 5', mRNA se... 58 3e-17 4 (DB854884) Nilaparvata lugens mRNA, EST clone:NLNA7491, 5' e... 62 3e-17 4 (AY421068) Homo sapiens HCM7434 gene, VIRTUAL TRANSCRIPT, pa... 60 4e-17 4 (AK132776) Mus musculus adult male testis cDNA, RIKEN full-l... 66 5e-17 3 (AF087688) Mus musculus alien-like protein mRNA, complete cds. 66 5e-17 3 (AK146153) Mus musculus cDNA, RIKEN full-length enriched lib... 66 5e-17 3 (AF071312) Mus musculus COP9 complex subunit 2 (COPS2) mRNA,... 66 5e-17 3 (BD301487) Identification and Use of Molecules Implicated in... 66 5e-17 3 (AX683118) Sequence 92 from Patent EP1279744. 66 5e-17 3 (DY968964) CLSM20016.b1_O11.ab1 CLS(LMS) lettuce sativa Lact... 48 5e-17 4 (AK010383) Mus musculus ES cells cDNA, RIKEN full-length enr... 66 5e-17 3 (CV181958) tai81a08.x1 Hydra EST UCI 5 ALP Hydra magnipapill... 56 6e-17 5 (BJ329001) Dictyostelium discoideum cDNA clone:dda30l10, 5' ... 62 6e-17 2 (EX843512) CBNC405.fwd CBNC Phycomyces blakesleeanus NRRL155... 50 6e-17 5 (EV235620) VV_PEb21d04.g1 Vitis vinifera cv. perlette LibB V... 60 6e-17 5 (EH694784) CCIM6688.b1_P15.ab1 CCI(LMS) chicory Cichorium in... 52 7e-17 5 (FC564372) CAWF5461.fwd CAWF Lottia gigantea from mantle (H)... 66 9e-17 3 (CL958295) OsIFCC001188 Oryza sativa Express Library Oryza s... 54 1e-16 5 (BT013684) Lycopersicon esculentum clone 132506R, mRNA seque... 54 1e-16 5 (AK103258) Oryza sativa Japonica Group cDNA clone:J033124C01... 54 1e-16 5 (AK145225) Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDN... 66 1e-16 3 (AJ684876) Sus scrofa EST, clone C0001807_E07. 56 1e-16 4 (AK037757) Mus musculus 16 days neonate thymus cDNA, RIKEN f... 66 1e-16 3 (AK132207) Mus musculus 10 days embryo whole body cDNA, RIKE... 66 1e-16 3 (AK084421) Mus musculus 12 days embryo eyeball cDNA, RIKEN f... 66 1e-16 3 (EL466679) CHTS5486.b2_L03.ab1 CHT(LMS) Jerusalem artichoke ... 60 1e-16 5 (FF736123) XABT49405.fwd Gateway compatible cien cDNA librar... 72 2e-16 2 (BE437685) SFR006.D08F990622 ITEC SFR Barley Leaf Epidermis ... 62 2e-16 5 (FL865184) CCGI8804.b1 CCGI Panicum virgatum etiolated seedl... 56 2e-16 7 (EX829159) CBNB1646.fwd CBNB Phycomyces blakesleeanus NRRL15... 50 2e-16 5 (BU993644) HD14D08r HD Hordeum vulgare cDNA clone HD14D08 5-... 62 3e-16 5 (BU975504) HB31F23r BC Hordeum vulgare subsp. vulgare cDNA c... 62 4e-16 5 (EX605632) 255351847 Pea aphid whole body normalized full le... 56 4e-16 4 (DT217838) KB-EST0002922 BNS6 Homo sapiens cDNA, mRNA sequence. 60 6e-16 4 (CF211035) CAB20007_IIa_Fa_A12 Cabernet Sauvignon Flower blo... 60 6e-16 4 (CF211098) CAB20007_IIa_Ra_A12 Cabernet Sauvignon Flower blo... 60 6e-16 4 (DT217137) KB-EST0002221 BNS6 Homo sapiens cDNA, mRNA sequence. 60 8e-16 4 (EE100301) S9B07409 Ripening Berries (VvS9) Vitis vinifera c... 44 8e-16 5 (AA874272) vx04h04.r1 Soares_thymus_2NbMT Mus musculus cDNA ... 66 9e-16 3 (EX829158) CBNB1646.rev CBNB Phycomyces blakesleeanus NRRL15... 78 9e-16 2 (EH717370) CNML4010.b1_D19.ab1 CNM(LMS) spotted knapweed Cen... 60 1e-15 5 (FM062639) Rattus norvegicus EST, 5'-end sequence, clone etc... 66 1e-15 3 (ES825194) UFL_427_68 Cotton fiber 0-10 day post anthesis Go... 44 1e-15 5 (DY974560) CLSM8236.b1_H19.ab1 CLS(LMS) lettuce sativa Lactu... 48 1e-15 5 (EH678792) CCIL3798.b1_L14.ab1 CCI(LMS) chicory Cichorium in... 54 2e-15 4 (BQ461659) HD03K17r HD Hordeum vulgare cDNA clone HD03K17 5-... 62 2e-15 4 (AA071761) mm70e03.r1 Stratagene mouse macrophage (#937306) ... 66 2e-15 3 (BQ800299) EST 7334 Veraison Grape berries SuperScriptTM Pla... 52 4e-15 5 (CD771080) AGENCOURT_14727317 NIH_MGC_190 Mus musculus cDNA ... 66 4e-15 3 (CB814070) AMGNNUC:SRPB2-00040-C7-A srpb2 (10220) Rattus nor... 66 4e-15 2 (CF444748) EST681093 normalized cDNA library of onion Allium... 46 6e-15 5 (FF582489) BG03021A2C12.f1 BG03- primary and normalized libr... 62 7e-15 4 (AU071359) Dictyostelium discoideum slug cDNA, clone SSB293. 96 8e-15 1 (AU053338) Dictyostelium discoideum slug cDNA, clone SLI420. 96 8e-15 1 (AU039794) Dictyostelium discoideum slug cDNA, clone SLG441. 96 8e-15 1 (CF443665) EST680010 normalized cDNA library of onion Allium... 46 1e-14 5 (FM086905) Rattus norvegicus EST, 5'-end sequence, clone etn... 66 1e-14 3 (CF906110) A0442H04-5 NIA Mouse Osteoblast cDNA Library (Lon... 66 2e-14 3 (EB378118) nbc38f01.y1 Rabbit trigeminal nerve. Unnormalized... 60 2e-14 4 (DN151885) 5213_B09_C17 Switchgrass callus cDNA library Pani... 62 2e-14 3 (DV156984) CV03104A1E09.f1 CV03-normalized library Euphorbia... 56 2e-14 3 (EH759081) CNSL454.b2_K17.ab1 CNS(LMS) yellow starthistle Ce... 44 3e-14 7 (AV997352) Ciona intestinalis cDNA, clone:cicl44e06, 5' end,... 72 3e-14 2 (BW279800) Ciona intestinalis cDNA, clone:cigd012a12, 5' end... 72 3e-14 2 (BW290756) Ciona intestinalis cDNA, clone:cigd042f04, 5' end... 72 3e-14 2 (BW284616) Ciona intestinalis cDNA, clone:cigd025h17, 5' end... 72 3e-14 2 (BW269009) Ciona intestinalis cDNA, clone:cign051o10, 5' end... 72 3e-14 2 (CK105898) UA43BPG03.5pR Populus dormant cambium cDNA librar... 50 3e-14 3 (BW263660) Ciona intestinalis cDNA, clone:cign035a14, 5' end... 72 3e-14 2 (BW441358) Ciona intestinalis cDNA, clone:cijv045g13, 5'end,... 72 3e-14 2 (BW127169) Ciona intestinalis cDNA, clone:rcign013l03, 3' en... 72 3e-14 2 (BW440762) Ciona intestinalis cDNA, clone:cijv043k15, 5'end,... 72 3e-14 2 (FK119749) XABT161690.b1 Gateway compatible cien cDNA librar... 72 4e-14 2 (FK229728) XABT230248.b1 Gateway compatible cien cDNA librar... 72 4e-14 2 (FF941451) CBWU75238.b1 Yutaka Satou unpublished cDNA librar... 72 4e-14 2 (CN287006) 17000532190450 GRN_EB Homo sapiens cDNA 5', mRNA ... 60 5e-14 4 (GE464933) 294762759 Nasonia vitripennis Adult Female Nasoni... 70 5e-14 2 (BU819448) UA43BPG03 Populus tremula cambium cDNA library Po... 50 5e-14 3 (BU987134) HF13O08r HF Hordeum vulgare subsp. vulgare cDNA c... 62 6e-14 3 (EG605131) GUTF098385O21 POSSUM_01-POSSUM-GUT-2KB Trichosuru... 50 6e-14 4 (DY963106) CLSM13365.b1_J06.ab1 CLS(LMS) lettuce sativa Lact... 48 6e-14 5 (FC567718) CAWF730.fwd CAWF Lottia gigantea from mantle (H) ... 66 9e-14 3 (EG609898) KIDNEYF100764O3 POSSUM_01-POSSUM-KIDNEY-2KB Trich... 50 9e-14 4 (CV862448) gonad_EST09924 Embryonic gonad cDNA Library Gallu... 56 1e-13 4 (DR345539) 970519 CERES-148 Arabidopsis thaliana cDNA clone ... 50 1e-13 4 (EC358964) IMMUNEF088882M11 POSSUM_01-C-POSSUM-IMMUNE-2KB Tr... 50 1e-13 4 (DY591288) GUTF074985L8 POSSUM_01-POSSUM-GUT-2KB Trichosurus... 50 1e-13 4 (DY596078) KIDNEYF074992J23 POSSUM_01-POSSUM-KIDNEY-2KB Tric... 50 1e-13 4 (EC333693) GUTF089690E19 POSSUM_01-POSSUM-GUT-2KB Trichosuru... 50 1e-13 4 (T14894) crs372 lambdaZAPST Ricinus communis cDNA clone pcrs... 58 1e-13 3 (CU437684) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 1e-13 4 (DY600674) LIVERF031278L10 POSSUM_01-POSSUM-LIVER-2KB Tricho... 50 1e-13 4 (EY283586) 1106514228351 03BABOON-C-01-1-3KB Papio anubis cD... 60 2e-13 2 (BX404404) human full-length cDNA 5-PRIME end of clone CL0BB... 60 2e-13 2 (BX365285) human full-length cDNA 5-PRIME end of clone CS0DI... 60 2e-13 2 (BX425393) human full-length cDNA 5-PRIME end of clone CL0BB... 60 2e-13 2 (BX338652) human full-length cDNA 5-PRIME end of clone CS0DI... 60 2e-13 2 (DC850526) Macaca fascicularis mRNA, clone: QspA-06265, 5' e... 60 2e-13 2 (FC768811) CBBN466.fwd CBBN Lottia gigantea 3,4,5,6.5d Larva... 66 2e-13 2 (CJ467044) Macaca fascicularis mRNA, clone: QnpA-16477, 5' e... 60 2e-13 2 (EX843511) CBNC405.rev CBNC Phycomyces blakesleeanus NRRL155... 78 2e-13 2 (DA032130) Homo sapiens cDNA clone ASTRO2016739, 5' end, mRN... 60 2e-13 2 (AL121486) Homo sapiens mRNA; EST DKFZp762N047_r1 (from clo... 60 2e-13 2 (BM726573) UI-E-EJ0-aii-m-14-0-UI.r1 UI-E-EJ0 Homo sapiens c... 60 2e-13 2 (AW955544) EST367614 MAGE resequences, MAGD Homo sapiens cDN... 60 2e-13 2 (EL438811) CHTM14017.b1_A02.ab1 CHT(LMS) Jerusalem artichoke... 48 2e-13 5 (DY598421) KIDNEYF031281N6 POSSUM_01-POSSUM-KIDNEY-2KB Trich... 50 2e-13 4 (AY421070) Mus musculus HCM7434 gene, VIRTUAL TRANSCRIPT, pa... 66 3e-13 3 (EB865748) 6769714 ZF03 Danio rerio cDNA clone 2579551, mRNA... 58 3e-13 4 (FF343185) BG02008A2E12.f1 BG02 - primary and normalized lib... 62 4e-13 3 (AC013452) Homo sapiens chromosome 15 clone RP11-325E5 map 1... 60 4e-13 7 (AK222018) Arabidopsis thaliana mRNA for putative PCI domain... 50 4e-13 4 (CV271159) WS0153.B21_P05 PTxN-IB-A-6 Populus trichocarpa x ... 50 4e-13 3 (CO067599) Mdfr3014g24.y1 Mdfr Malus x domestica cDNA clone ... 50 5e-13 4 (EX290480) 1578633_5_P15_050 PY06 Carica papaya cDNA, mRNA s... 58 6e-13 3 (AJ944999) Sus scrofa EST, clone C0007308k22, 5' direction. 60 7e-13 2 (CK598338) AGENCOURT_17838774 NIH_MGC_238 Rattus norvegicus ... 56 7e-13 2 (EX645532) 256671018 Pea aphid whole body normalized full le... 56 7e-13 2 (FF330997) 280445190 Pea aphid whole body normalized full le... 56 7e-13 2 (FM123217) Rattus norvegicus EST, 5'-end sequence, clone etn... 56 7e-13 2 (EW057546) rpigcb_1063.y1 cty Sus scrofa cDNA 5', mRNA seque... 60 8e-13 2 (BJ329974) Dictyostelium discoideum cDNA clone:dda26m22, 5' ... 58 8e-13 2 (AC036102) Homo sapiens chromosome 15 clone CTD-2297L20 map ... 60 9e-13 6 (BU635727) 034B12 Infected Arabidopsis Leaf Arabidopsis thal... 50 9e-13 4 (FD055099) CBPO3483.b1 CBPO: Normalized channel catfish cDNA... 50 1e-12 3 (EC285935) BRAINF089478I1 POSSUM_01-POSSUM-C-BRAIN-2KB Trich... 50 1e-12 3 (EC327615) GUTF091684K1 POSSUM_01-POSSUM-GUT-2KB Trichosurus... 50 1e-12 3 (CK194545) FGAS002976 Triticum aestivum FGAS: Library 3 Gate... 62 1e-12 4 (EG607855) KIDNEYF098372L23 POSSUM_01-POSSUM-KIDNEY-2KB Tric... 50 1e-12 3 (DW058405) CLLY11031.b2_M22.ab1 CLL(XYZ) lettuce saligna Lac... 54 2e-12 4 (DV660496) DS194B_C09 Eppig Hampl Solter fully-grown mouse o... 66 2e-12 2 (AF114242) Mus musculus signalosome component COPS2 (Cops2) ... 66 2e-12 2 (EE712056) AGENCOURT_90016589 NIH_ZGC_28 Danio rerio cDNA cl... 58 2e-12 4 (EV758841) AGENCOURT_109129120 NIH_ZGC_30 Danio rerio cDNA c... 58 2e-12 4 (BE533784) 601233042F1 NCI_CGAP_Mam6 Mus musculus cDNA clone... 66 2e-12 2 (EV760985) AGENCOURT_109129216 NIH_ZGC_30 Danio rerio cDNA c... 58 2e-12 4 (AL583604) human full-length cDNA 5-PRIME end of clone CS0DI... 56 3e-12 2 (EV414684) 210738337 NGP Nasonia giraulti cDNA clone 147E17 ... 64 3e-12 2 (DV626590) 97066.1 Cold Sweetening C Solanum tuberosum cDNA ... 60 4e-12 4 (EV148259) 0137086 Brassica napus Early anther Brassica napu... 58 4e-12 3 (DR926014) EST1117553 Aquilegia cDNA library Aquilegia formo... 48 4e-12 5 (EV148615) 0137606 Brassica napus Early anther Brassica napu... 58 4e-12 3 (EV190244) 0087725 Brassica napus Cold acclimation - dark Br... 58 4e-12 3 (CN287001) 17000600020706 GRN_PRENEU Homo sapiens cDNA 5', m... 60 4e-12 3 (FG201091) AGN_PNL230dr1_h7.trimmed.seq AGN_PNL Nicotiana ta... 52 5e-12 3 (AC005623) Arabidopsis thaliana chromosome 2 clone T20P8 map... 50 5e-12 10 (EE803073) 020731ONDC230024HT ONDC Ovis aries cDNA, mRNA seq... 54 5e-12 3 (EX768458) RR3CG96JQ RR3(NY) Raphanus raphanistrum subsp. ra... 68 5e-12 3 (FG688155) G1144P34FO23.T0 Anolis carolinensis pooled normal... 68 5e-12 3 (FG663778) G1142P313FC8.T0 Anolis carolinensis pooled normal... 68 5e-12 3 (BC071025) Xenopus laevis hypothetical protein LOC432342, mR... 70 5e-12 2 (EW334851) rpliv0113_a6.y1 liv Sus scrofa cDNA 5', mRNA sequ... 56 5e-12 3 (BF140419) 601787735F1 NCI_CGAP_Lu30 Mus musculus cDNA clone... 66 6e-12 3 (AJ725177) Gallus gallus EST, clone 29h3s3. 56 6e-12 5 (CJ960266) Triticum aestivum cDNA clone:whchul22j12, 3' end. 62 6e-12 4 (BW343875) Ciona intestinalis cDNA, clone:ciem825n18, 5'end,... 64 7e-12 2 (BW597158) Lotus japonicus cDNA, clone: LjCa-010-AC12, 5' en... 48 7e-12 3 (BI746766) rm31d12.y1 Meloidogyne arenaria egg pAMP1 v1 Chia... 44 7e-12 5 (EH753106) CNSL12395.b1_F03.ab1 CNS(LMS) yellow starthistle ... 38 8e-12 6 (EL471799) CHTM28874.b1_C19.ab1 CHT(LMS) Jerusalem artichoke... 44 9e-12 5 (EL444111) CHTM21013.b1_I22.ab1 CHT(LMS) Jerusalem artichoke... 44 9e-12 5 (BE426393) WHE0334_C05_E10ZS Wheat unstressed seedling shoot... 62 9e-12 3 (BQ295249) WHE2867_H03_O05ZS Wheat unstressed root tip cDNA ... 62 1e-11 3 (EW329518) rpliv0113_b6.y1 liv Sus scrofa cDNA 5', mRNA sequ... 56 1e-11 3 (EY018248) CBAB1963.g1:P T. versicolor self root extracts re... 52 1e-11 3 (EY017130) CBAB1296.b1:P T. versicolor self root extracts re... 52 1e-11 3 (EY005419) CBAI1216.g1:P T. versicolor root tip enriched SSH... 52 1e-11 3 (EY017131) CBAB1296.g1:P T. versicolor self root extracts re... 52 1e-11 3 (AC105523) Rattus norvegicus clone CH230-211H21, WORKING DRA... 66 1e-11 6 (CJ951692) Triticum aestivum cDNA clone:whchul33o15, 5' end. 62 2e-11 3 (ES808214) UFL_304_09 Cotton fiber 0-10 day post anthesis Go... 44 2e-11 3 (DR760367) HESC4_115_C09.g1_A037 NIH_MGC_262 Homo sapiens cD... 60 2e-11 3 (DT313519) JGI_CAAX3584.fwd CAAX Pimephales promelas testis ... 50 2e-11 3 (CF749738) UI-M-HJ0-cmn-m-06-0-UI.r1 NIH_BMAP_HJ0 Mus muscul... 62 3e-11 2 (CN768453) taf67c11.y1 Hydra EST Darmstadt I Hydra magnipapi... 56 3e-11 4 (CD899114) G174.111C19F010825 G174 Triticum aestivum cDNA cl... 62 3e-11 3 (AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 54 3e-11 2 (AP000815) Oryza sativa Japonica Group genomic DNA, chromoso... 54 4e-11 2 (EA700400) Sequence 79279 from patent US 7365185. 54 4e-11 2 (CL730159) OR_BBa0061N22.f OR_BBa Oryza nivara genomic clone... 54 4e-11 2 (DU566155) OO__Ba0050B01.r OO__Ba Oryza officinalis genomic ... 54 4e-11 2 (CW636894) OA_ABa0171P09.f OA_ABa Oryza australiensis genomi... 54 4e-11 2 (CJ672574) Triticum aestivum cDNA clone whms10h04 5', Y.Ogih... 62 4e-11 2 (CJ638830) Triticum aestivum cDNA clone whec14l01 5', Y.Ogih... 62 4e-11 2 (FD499303) Ltu01b_197_C08_C012.g1 Liriodendron Flower Bud Li... 50 5e-11 3 (ES731486) Nad03b_31_G08_C005.g1 Nuphar advena flower bud li... 66 5e-11 3 (W76736) me66e11.r1 Soares mouse embryo NbME13.5 14.5 Mus mu... 66 5e-11 2 (CA540462) C0292A03-5N NIA Mouse 7.5-dpc Whole Embryo cDNA L... 66 7e-11 2 (EE792868) 020709OMLT1010029HT OMLT Ovis aries cDNA, mRNA se... 54 7e-11 3 (EH683406) CCIL8092.b1_G07.ab1 CCI(LMS) chicory Cichorium in... 54 7e-11 3 (BE849612) uw87a10.y1 Soares_mammary_gland_NMLMG Mus musculu... 66 7e-11 2 (EL396058) CFFM7353.b1_A15.ab1 CFF(LMS) safflower Carthamus ... 46 7e-11 4 (CA530680) C0301D08-5N NIA Mouse Undifferentiated ES Cell cD... 66 7e-11 2 (AA930953) vy79c11.r1 Stratagene mouse macrophage (#937306) ... 66 7e-11 2 (CV859049) gonad_EST06525 Embryonic gonad cDNA Library Gallu... 56 7e-11 4 (EL386886) CFFM2426.b1_D07.ab1 CFF(LMS) safflower Carthamus ... 46 7e-11 4 (AW908453) uf78a03.y1 Soares_mammary_gland_NMLMG Mus musculu... 66 7e-11 2 (AV505436) Mus musculus cDNA, Abe mouse ES cell cDNA library... 66 7e-11 2 (BE851181) uw93b07.y1 Soares_mammary_gland_NMLMG Mus musculu... 66 8e-11 2 (EL394174) CFFM5610.b1_C12.ab1 CFF(LMS) safflower Carthamus ... 46 8e-11 4 (EX073181) BR057825 root cDNA library KBRT Brassica rapa sub... 58 8e-11 3 (CO734321) SlLH03c08h05f1 squirrel heart library 1 Spermophi... 52 8e-11 3 (AW990342) uf37f06.y1 Soares_mammary_gland_NMLMG Mus musculu... 66 8e-11 2 (DW166028) CLVY4534.b1_L06.ab1 CLV(XYZ) lettuce virosa Lactu... 48 8e-11 4 (AA529702) vi42d10.r1 Beddington mouse embryonic region Mus ... 66 9e-11 2 (CN679498) E0125C05-5 NIA Mouse Embryonic Stem (ES) cell (Li... 66 9e-11 2 (CF909274) A0534D09-5 NIA Mouse Mesenchymal Stem Cell cDNA L... 66 1e-10 2 (CN662460) A0734D09-5 NIA Mouse Hematopoietic Stem Cell (Lin... 66 1e-10 2 (CK030748) AGENCOURT_16649445 NIH_MGC_203 Mus musculus cDNA ... 66 1e-10 2 (AC200276) Gallus gallus chromosome 10 clone CH261-109F22, *... 62 1e-10 10 (CB182513) AGENCOURT_11383171 NIH_MGC_164 Mus musculus cDNA ... 66 1e-10 2 (BM479544) AGENCOURT_6465076 NIH_MGC_92 Homo sapiens cDNA cl... 54 2e-10 2 (BE919574) EST423343 potato leaves and petioles Solanum tube... 54 2e-10 2 (FM106627) Rattus norvegicus EST, 5'-end sequence, clone etn... 56 2e-10 2 (AC182945) Bos taurus clone CH240-278C11, WORKING DRAFT SEQU... 48 2e-10 3 (FE155039) LV_LO_RA015P14r Litopenaeus vannamei lymphoid org... 54 2e-10 3 (EW714743) RS1AK79TF RS1(AR) Raphanus sativus var. oleiformi... 60 2e-10 3 (EE746636) 020502OAPP1023005HT OAPP Ovis aries cDNA, mRNA se... 48 2e-10 3 (EE376094) LB03067.CR_I14 GC_BGC-30 Bos taurus cDNA clone IM... 48 2e-10 3 (CN895709) 010626AAYA005746HT (AAYA) Royal Gala 126 DAFB fru... 42 3e-10 4 (EB683841) KR3B.113K13F.060119T7 KR3B Nicotiana tabacum cDNA... 54 3e-10 4 (CX705860) gmrtDrNS01_05-C_M13R_E10_072.s1 Water stressed 5h... 60 3e-10 3 (BU877416) V033G05 Populus flower cDNA library Populus trich... 40 3e-10 5 (DV162035) KP1B.109O17F.050727T7 KP1B Nicotiana tabacum cDNA... 54 3e-10 4 (EL443511) CHTM20460.b1_H03.ab1 CHT(LMS) Jerusalem artichoke... 44 4e-10 5 (AC189333) Brassica rapa subsp. pekinensis clone KBrB038M13,... 58 4e-10 11 (ES717655) C20R5_18_C09_E002.g1 USDA-Tifton Peanut Library C... 52 4e-10 4 (ES396456) MUS12-E06.x1d-t SHGC-MUS Mytilus californianus cD... 68 5e-10 4 (BI854723) 603381665F1 NCI_CGAP_Mam6 Mus musculus cDNA clone... 58 5e-10 2 (BM535992) EST589014 tomato breaker fruit Solanum lycopersic... 52 5e-10 3 (BE461126) EST412545 tomato breaker fruit, TIGR Solanum lyco... 52 5e-10 3 (BE433965) EST405043 tomato breaker fruit, TIGR Solanum lyco... 52 5e-10 3 (AW649595) EST328049 tomato germinating seedlings, TAMU Sola... 52 6e-10 3 (DY336852) OB_SEa04P11.r OB_SEa Ocimum basilicum cDNA clone ... 60 6e-10 2 (DN939318) 5937.2 After-Cooking Darkening A Solanum tuberosu... 60 6e-10 2 (AW030304) EST273559 tomato callus, TAMU Solanum lycopersicu... 60 6e-10 2 (BP883036) Solanum lycopersicum cDNA, clone: FA24CG03, 5' en... 60 6e-10 2 (EE598432) BT-TOMOV-030-1-F12-T3_F12 Whitefly Bemisia tabaci... 50 6e-10 2 (T34713) EST73889 Human Bone Homo sapiens cDNA 5' end simila... 60 6e-10 2 (EY018247) CBAB1963.b1:P T. versicolor self root extracts re... 52 6e-10 3 (BC071320) Danio rerio COP9 constitutive photomorphogenic ho... 58 8e-10 4 (EG949525) HA_MX0_68b06_SP6 Lobster Multiple Tissues, Normal... 62 8e-10 3 (CB358337) ZF001-P00023-DPE-F-C_E05 GISZF001 Danio rerio cDN... 58 9e-10 3 (EC927636) WIN0216.TB24_I10 Cab Sauv flower, leaf and root n... 58 9e-10 3 (AA797339) vw23h01.r1 Soares_mammary_gland_NbMMG Mus musculu... 62 1e-09 2 (DN169532) LH__Ea05D22.r LH__Ea Solanum habrochaites cDNA cl... 52 1e-09 3 (CN068735) N19_Ag2_p24_E11_M13R AG Ambystoma tigrinum tigrin... 54 1e-09 3 (EB927061) 10055831 ZF31 Danio rerio cDNA clone 3264495, mRN... 58 2e-09 3 (EH446962) FDR103-P00043-DEPE-F_E04 FDR103 Danio rerio cDNA ... 58 2e-09 4 (CA938506) sav33f09.y1 Gm-c1048 Glycine max cDNA clone SOYBE... 52 2e-09 3 (EB234508) PEG003-C-208821-501 Normalized Pedal-Pleural Gang... 46 2e-09 3 (CN899486) 010714ABAA001098HT (ABAA) Pacific Rose spur buds ... 48 2e-09 4 (BU082344) sar08b07.y1 Gm-c1049 Glycine max cDNA clone SOYBE... 52 2e-09 3 (BQ438195) AGENCOURT_7889803 NIH_MGC_71 Homo sapiens cDNA cl... 48 2e-09 2 (EB256250) CNSN01-C-002071-501 Normalized CNS library (juven... 46 3e-09 3 (AC175485) Bos taurus clone CH240-224A14, WORKING DRAFT SEQU... 44 3e-09 3 (CF966707) 9585rsiced_9787.y1 Oryza sativa cv. LYP9 trefoil ... 48 3e-09 4 (EV573611) RR4B340JQ RR4(PB) Raphanus raphanistrum subsp. la... 60 3e-09 3 (DR463297) CM116H10 Cotton Lambda Zap Express Library Gossyp... 42 3e-09 3 (CK690617) ZF101-P00053-DEPE-F2_D23 GISZF001_ra Danio rerio ... 58 4e-09 3 (CU041367) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 54 4e-09 8 (DN778995) E7091 [C3718|slt8_f10] Salinity Library Thellungi... 58 7e-09 3 (DR411935) gPGC_EST01777 Embryonic gonadal PGC cDNA Library ... 56 9e-09 5
>(BJ346739) Dictyostelium discoideum cDNA clone:dda24j23, 3' end, single read. Length = 786
Score = 1366 bits (689), Expect(3) = 0.0 Identities = 694/696 (99%) Strand = Plus / Minus
Query: 1599 agaaaggtagtcaattggttgatatttatgctttagagattccaaatgtatacagaaacc 1658 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 786 agaaaggtagtcaattggttgatatttatgctttagagatttcaaatgtatacagaaacc 727
Query: 1659 aaaaccaataagaaattaaaagatttgtataaaaaagcacttgaaatcaagagtgccatt 1718 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 aaaancaataagaaattaaaagatttgtataaaaaagcacttgaaatcaagagtgccatt 667
Query: 1719 cctcatccacgtattatgggtatcattagagaatgtggtggtaaaatgcacatggctgaa 1778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 cctcatccacgtattatgggtatcattagagaatgtggtggtaaaatgcacatggctgaa 607
Query: 1779 aaagaatgggaaaaagcacatacagacttttttgaagctttcaaaaattatgatgaagct 1838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 aaagaatgggaaaaagcacatacagacttttttgaagctttcaaaaattatgatgaagct 547
Query: 1839 ggtaactctagaagaattcaatgtcttaaatatttagttttagcatgtatgttaatgctt 1898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggtaactctagaagaattcaatgtcttaaatatttagttttagcatgtatgttaatgctt 487
Query: 1899 tcaactattaatccatttgattcaactgaagcaaaaccatataaaaatgatccagatatt 1958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 tcaactattaatccatttgattcaactgaagcaaaaccatataaaaatgatccagatatt 427
Query: 1959 ttagcaatgacaaatttagttatggcttatgaaaagaatgatatttatgcatttgaaaag 2018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 ttagcaatgacaaatttagttatggcttatgaaaagaatgatatttatgcatttgaaaag 367
Query: 2019 atcttaaaagataatcgtaaaactattatggatgatccattcattagaatgtacattgaa 2078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 atcttaaaagataatcgtaaaactattatggatgatccattcattagaatgtacattgaa 307
Query: 2079 gatttattaagaaacattagaactcaagtccttttgaaacttttgaaaccatacactaga 2138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 gatttattaagaaacattagaactcaagtccttttgaaacttttgaaaccatacactaga 247
Query: 2139 attagaatttcattcatctctaaagaattgaatattccatccagtgatgtagagtctctt 2198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 attagaatttcattcatctctaaagaattgaatattccatccagtgatgtagagtctctt 187
Query: 2199 ttagtttctttgatccttgataataagattagaggttcaattgatcaagtaaatcaacag 2258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 ttagtttctttgatccttgataataagattagaggttcaattgatcaagtaaatcaacag 127
Query: 2259 ttagaacttgatactgctaaatcttctgcttattgg 2294 |||||||||||||||||||||||||||||||||||| Sbjct: 126 ttagaacttgatactgctaaatcttctgcttattgg 91
Score = 125 bits (63), Expect(3) = 0.0 Identities = 65/66 (98%) Strand = Plus / Minus
Query: 2297 aatatacttcaattcataaatgggcaaatcaaatcggtcaacttaatggtggtataaata 2356 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 89 aatatacttcaattcataaatgggcaaatcaaatcggtcaacttaatggnggtataaata 30
Query: 2357 ataaat 2362 |||||| Sbjct: 29 ataaat 24
Score = 28.2 bits (14), Expect(3) = 0.0 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 2363 tagtttcttaaaat 2376 |||||||||||||| Sbjct: 24 tagtttcttaaaat 11
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 98226423 Number of Hits to DB: 2,848,913,598 Number of extensions: 185618616 Number of successful extensions: 17044923 Number of sequences better than 10.0: 1479 Length of query: 2480 Length of database: 98,766,808,389 Length adjustment: 25 Effective length of query: 2455 Effective length of database: 96,311,147,814 Effective search space: 236443867883370 Effective search space used: 236443867883370 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 7.17 |
Homology vs Protein |
Query= Contig-U15678-1 (Contig-U15678-1Q) /CSM_Contig/Contig-U15678-1Q.Seq.d (2480 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(O01422) RecName: Full=COP9 signalosome complex subunit 2; ... 228 e-101 AP008207_1014(AP008207|pid:none) Oryza sativa (japonica cultivar... 317 1e-84 AP000815_2(AP000815|pid:none) Oryza sativa Japonica Group genomi... 317 1e-84 EF144208_1(EF144208|pid:none) Populus trichocarpa clone PX0011_D... 317 2e-84 AC145330_16(AC145330|pid:none) Medicago truncatula clone mth2-17... 315 5e-84 AY050437_1(AY050437|pid:none) Arabidopsis thaliana At2g26990/T20... 302 4e-80 D84667(D84667)probable PCI domain protein [imported] - Arabidops... 301 8e-80 (Q8W207) RecName: Full=COP9 signalosome complex subunit 2; ... 301 8e-80 AB169606_1(AB169606|pid:none) Macaca fascicularis brain cDNA, cl... 296 3e-78 BC108778_1(BC108778|pid:none) Xenopus laevis hypothetical protei... 296 3e-78 AK146153_1(AK146153|pid:none) Mus musculus cDNA, RIKEN full-leng... 296 3e-78 (P61201) RecName: Full=COP9 signalosome complex subunit 2; ... 296 3e-78 AK010383_1(AK010383|pid:none) Mus musculus ES cells cDNA, RIKEN ... 296 3e-78 AB209799_1(AB209799|pid:none) Homo sapiens mRNA for COP9 constit... 296 3e-78 AF071312_1(AF071312|pid:none) Mus musculus COP9 complex subunit ... 296 3e-78 AK222590_1(AK222590|pid:none) Homo sapiens mRNA for COP9 constit... 294 1e-77 BC114035_1(BC114035|pid:none) Bos taurus COP9 constitutive photo... 293 2e-77 AJ720904_1(AJ720904|pid:none) Gallus gallus mRNA for hypothetica... 293 3e-77 BT077002_1(BT077002|pid:none) Caligus rogercresseyi clone crog-e... 290 2e-76 AK222018_1(AK222018|pid:none) Arabidopsis thaliana mRNA for puta... 276 3e-72 (Q94899) RecName: Full=COP9 signalosome complex subunit 2; ... 276 3e-72 FN318118_1(FN318118|pid:none) Schistosoma japonicum isolate Anhu... 267 1e-69 FN357329_20(FN357329|pid:none) Schistosoma mansoni genome sequen... 265 8e-69 CR954201_330(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 261 9e-68 CP001574_241(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 258 6e-67 AM488774_1(AM488774|pid:none) Vitis vinifera contig VV78X267795.... 252 5e-65 AM270250_1(AM270250|pid:none) Aspergillus niger contig An11c0330... 227 1e-57 (Q7SI58) RecName: Full=COP9 signalosome complex subunit 2; ... 226 4e-57 CU633899_116(CU633899|pid:none) Podospora anserina genomic DNA c... 224 9e-57 AP007167_278(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 223 3e-56 AM920435_305(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 220 2e-55 U57758_1(U57758|pid:none) Drosophila melanogaster putative thyro... 204 1e-50 AF120268_1(AF120268|pid:none) Homo sapiens ALIEN (ALIEN) mRNA, c... 184 1e-44 L40388_1(L40388|pid:none) Homo sapiens thyroid receptor interact... 184 1e-44 CR382132_699(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 152 2e-44 CR382134_479(CR382134|pid:none) Debaryomyces hansenii strain CBS... 132 2e-41 AB093651_1(AB093651|pid:none) Macaca fascicularis brain cDNA clo... 159 6e-37 AC091330_42(AC091330|pid:none) Trypanosoma brucei chromosome 3 c... 118 2e-32 FN392319_1244(FN392319|pid:none) Pichia pastoris GS115 chromosom... 114 2e-23 AY118505_1(AY118505|pid:none) Drosophila melanogaster LD10463 fu... 100 2e-19 AY230837_1(AY230837|pid:none) Arabidopsis thaliana 26S proteasom... 99 6e-19 FM992689_865(FM992689|pid:none) Candida dubliniensis CD36 chromo... 99 6e-19 AY230834_1(AY230834|pid:none) Arabidopsis thaliana 26S proteasom... 99 6e-19 A86414(A86414) hypothetical protein F28N24.15 - Arabidopsis thal... 99 6e-19 BT035753_1(BT035753|pid:none) Zea mays full-length cDNA clone ZM... 97 3e-18 AF083890_1(AF083890|pid:none) Arabidopsis thaliana 19S proteosom... 97 3e-18 (Q54UB5) RecName: Full=26S proteasome non-ATPase regulatory subu... 97 4e-18 EU969379_1(EU969379|pid:none) Zea mays clone 329471 26S proteaso... 96 5e-18 AK064788_1(AK064788|pid:none) Oryza sativa Japonica Group cDNA c... 96 5e-18 BT053774_1(BT053774|pid:none) Zea mays full-length cDNA clone ZM... 96 5e-18 AK076002_1(AK076002|pid:none) Mus musculus 10 days embryo whole ... 96 6e-18 (Q8BG32) RecName: Full=26S proteasome non-ATPase regulatory subu... 96 6e-18 BC055457_1(BC055457|pid:none) Mus musculus proteasome (prosome, ... 96 6e-18 (O00231) RecName: Full=26S proteasome non-ATPase regulatory subu... 96 6e-18 DQ000548_1(DQ000548|pid:none) Synthetic construct clone PSF:1085... 96 6e-18 BC030432_1(BC030432|pid:none) Mus musculus proteasome (prosome, ... 96 6e-18 BC168749_1(BC168749|pid:none) Rattus norvegicus cDNA clone IMAGE... 96 6e-18 AK136049_1(AK136049|pid:none) Mus musculus in vitro fertilized e... 96 6e-18 AC146468_9(AC146468|pid:none) Oryza sativa (japonica cultivar-gr... 95 1e-17 BT069707_1(BT069707|pid:none) Zea mays full-length cDNA clone ZM... 95 1e-17 BC124767_1(BC124767|pid:none) Danio rerio proteasome (prosome, m... 93 4e-17 EF146969_1(EF146969|pid:none) Populus trichocarpa clone WS01225_... 92 1e-16 AM424416_1(AM424416|pid:none) Vitis vinifera contig VV78X196128.... 91 2e-16 AK223196_1(AK223196|pid:none) Homo sapiens mRNA for proteasome 2... 91 2e-16 AE013599_2045(AE013599|pid:none) Drosophila melanogaster chromos... 89 6e-16 (P70460) RecName: Full=Vasodilator-stimulated phosphoprotein; ... 87 2e-15 EU752639_1(EU752639|pid:none) Populus tremula isolate swl28-3 NA... 87 2e-15 X98475_1(X98475|pid:none) M.musculus VASP gene. 87 2e-15 EU752646_1(EU752646|pid:none) Populus tremula isolate swl28-31 N... 87 3e-15 (P34481) RecName: Full=Uncharacterized protein F59B2.5; 86 7e-15 FN357475_9(FN357475|pid:none) Schistosoma mansoni genome sequenc... 85 1e-14 FN319010_1(FN319010|pid:none) Schistosoma japonicum isolate Anhu... 85 1e-14 (Q9P7S2) RecName: Full=Probable 26S proteasome regulatory subuni... 84 2e-14 (Q2TA49) RecName: Full=Vasodilator-stimulated phosphoprotein; ... 84 2e-14 (P50552) RecName: Full=Vasodilator-stimulated phosphoprotein; ... 84 3e-14 BC168841_1(BC168841|pid:none) Rattus norvegicus vasodilator-stim... 84 3e-14 A84509_1(A84509|pid:none) Sequence 124 from Patent WO9845704. &... 84 3e-14 BT077675_1(BT077675|pid:none) Lepeophtheirus salmonis Pacific fo... 83 4e-14 FN392321_1098(FN392321|pid:none) Pichia pastoris GS115 chromosom... 83 4e-14 BC026019_1(BC026019|pid:none) Homo sapiens vasodilator-stimulate... 82 1e-13 U13876_15(U13876|pid:none) Caenorhabditis elegans cosmid F57B9, ... 81 2e-13 U13876_16(U13876|pid:none) Caenorhabditis elegans cosmid F57B9, ... 81 2e-13 CP000078_38(CP000078|pid:none) Leishmania major strain Friedlin ... 81 2e-13 H88493(H88493)protein F57B9.10 [imported] - Caenorhabditis elegans 81 2e-13 AM502220_29(AM502220|pid:none) Leishmania infantum chromosome 2. 81 2e-13 X98534_1(X98534|pid:none) H.sapiens VASP gene, exons 4 to 13 and... 80 4e-13 AM494939_40(AM494939|pid:none) Leishmania braziliensis chromosom... 79 6e-13 AX885535_1(AX885535|pid:none) Sequence 1398 from Patent EP1033401. 79 6e-13 (P50551) RecName: Full=Vasodilator-stimulated phosphoprotein; ... 79 6e-13 FJ860120_1(FJ860120|pid:none) Cadophora finlandica isolate PRF15... 79 1e-12 CR382139_730(CR382139|pid:none) Debaryomyces hansenii strain CBS... 78 1e-12 AK170780_1(AK170780|pid:none) Mus musculus NOD-derived CD11c +ve... 77 2e-12 BX538352_42(BX538352|pid:none) Cryptosporidium parvum chromosome... 76 5e-12 AK290179_1(AK290179|pid:none) Homo sapiens cDNA FLJ77490 complet... 75 2e-11 AB017437_1(AB017437|pid:none) Gallus gallus mRNA for avena, comp... 75 2e-11 U72522_1(U72522|pid:none) Mus musculus neural variant mena++ pro... 75 2e-11 AB057641_1(AB057641|pid:none) Gallus gallus mRNA for avEna neura... 75 2e-11 U72521_1(U72521|pid:none) Mus musculus neural variant mena+ prot... 75 2e-11 BC158313_1(BC158313|pid:none) Xenopus tropicalis enabled homolog... 75 2e-11 BC073107_1(BC073107|pid:none) Xenopus laevis MGC83587 protein, m... 75 2e-11 AL356216_1(AL356216|pid:none) Human DNA sequence from clone RP4-... 75 2e-11 AL356216_2(AL356216|pid:none) Human DNA sequence from clone RP4-... 75 2e-11 BC077786_1(BC077786|pid:none) Xenopus laevis hypothetical protei... 74 2e-11 BC072836_1(BC072836|pid:none) Xenopus laevis MGC80202 protein, m... 74 2e-11 BC083927_1(BC083927|pid:none) Rattus norvegicus enabled homolog ... 73 4e-11 AE016817_680(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 73 6e-11 BC167329_1(BC167329|pid:none) Xenopus tropicalis cDNA clone MGC:... 72 7e-11 AL355930_21(AL355930|pid:none) Neurospora crassa DNA linkage gro... 72 7e-11 AL928979_1(AL928979|pid:none) Zebrafish DNA sequence from clone ... 72 1e-10 BX663502_1(BX663502|pid:none) Zebrafish DNA sequence from clone ... 72 1e-10 AE013599_2998(AE013599|pid:none) Drosophila melanogaster chromos... 72 1e-10 AE017356_88(AE017356|pid:none) Cryptococcus neoformans var. neof... 72 1e-10 (Q9UI08) RecName: Full=Ena/VASP-like protein; AltName: Full=Ena/... 72 1e-10 BC077932_1(BC077932|pid:none) Xenopus laevis vasodilator-stimula... 72 1e-10 BC065327_1(BC065327|pid:none) Danio rerio Enah/Vasp-like b, mRNA... 71 2e-10 BC155188_1(BC155188|pid:none) Danio rerio Enah/Vasp-like b, mRNA... 71 2e-10 AE013599_3003(AE013599|pid:none) Drosophila melanogaster chromos... 71 2e-10 AY084210_1(AY084210|pid:none) Drosophila melanogaster SD08336 fu... 71 2e-10 AY007501_1(AY007501|pid:none) Hirudo medicinalis enabled-like pr... 71 2e-10 (O08719) RecName: Full=Ena/VASP-like protein; AltName: Full=Ena/... 70 3e-10 (Q5R896) RecName: Full=Ena/VASP-like protein; AltName: Full=Ena/... 70 4e-10 U72519_1(U72519|pid:none) Mus musculus Ena-VASP like protein (Ev... 70 4e-10 AK295919_1(AK295919|pid:none) Homo sapiens cDNA FLJ58489 complet... 70 4e-10 AK301379_1(AK301379|pid:none) Homo sapiens cDNA FLJ61429 complet... 70 4e-10 AE013599_3002(AE013599|pid:none) Drosophila melanogaster chromos... 70 4e-10 BC059810_1(BC059810|pid:none) Mus musculus Ena-vasodilator stimu... 70 5e-10 BX000468_1(BX000468|pid:none) Zebrafish DNA sequence from clone ... 69 6e-10 BC153787_1(BC153787|pid:none) Xenopus laevis Ena/VASP-like prote... 69 8e-10 FN357388_31(FN357388|pid:none) Schistosoma mansoni genome sequen... 68 1e-09 CR382125_53(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 67 3e-09 FN317007_1(FN317007|pid:none) Schistosoma japonicum isolate Anhu... 66 5e-09 BC134961_1(BC134961|pid:none) Danio rerio zgc:162320, mRNA (cDNA... 66 5e-09 CT005264_230(CT005264|pid:none) Leishmania major strain Friedlin... 66 7e-09 BC170924_1(BC170924|pid:none) Xenopus tropicalis hypothetical pr... 65 2e-08 BC090907_1(BC090907|pid:none) Danio rerio zgc:103638, mRNA (cDNA... 64 3e-08 BC095619_1(BC095619|pid:none) Danio rerio zgc:111960, mRNA (cDNA... 63 6e-08 AM494962_179(AM494962|pid:none) Leishmania braziliensis chromoso... 62 8e-08 BC045383_1(BC045383|pid:none) Danio rerio zgc:55557, mRNA (cDNA ... 62 1e-07 AF093264_1(AF093264|pid:none) Homo sapiens homer-2b mRNA, comple... 61 2e-07 AF081530_1(AF081530|pid:none) Homo sapiens neuralized binding pr... 61 2e-07 Y19028_1(Y19028|pid:none) Homo sapiens mRNA for Homer-2 protein,... 61 2e-07 AK292772_1(AK292772|pid:none) Homo sapiens cDNA FLJ75474 complet... 61 2e-07 BC120170_1(BC120170|pid:none) Bos taurus homer 2, mRNA (cDNA clo... 61 2e-07 AF093263_1(AF093263|pid:none) Homo sapiens homer-2a mRNA, comple... 61 2e-07 AB007690_1(AB007690|pid:none) Rattus norvegicus mRNA for Vesl-2(... 61 2e-07 AY809912_1(AY809912|pid:none) Schistosoma japonicum SJCHGC07300 ... 61 2e-07 FN313997_1(FN313997|pid:none) Schistosoma japonicum isolate Anhu... 61 2e-07 (Q99JP6) RecName: Full=Homer protein homolog 3; Short=H... 60 3e-07 AF093261_1(AF093261|pid:none) Mus musculus homer-3 mRNA, partial... 60 3e-07 (Q9NSC5) RecName: Full=Homer protein homolog 3; Short=H... 60 4e-07 AC002985_3(AC002985|pid:none) Human DNA from chromosome 19-speci... 60 4e-07 CS301520_1(CS301520|pid:none) Sequence 39 from Patent EP1662255.... 60 4e-07 AY859476_1(AY859476|pid:none) Xenopus laevis homer 1b-1 mRNA, co... 60 4e-07 FN357354_54(FN357354|pid:none) Schistosoma mansoni genome sequen... 60 4e-07 Y18896_1(Y18896|pid:none) Homo sapiens mRNA for Homer-3D protein. 60 4e-07 AK124450_1(AK124450|pid:none) Homo sapiens cDNA FLJ42459 fis, cl... 60 4e-07 BC047438_1(BC047438|pid:none) Homo sapiens homer homolog 1 (Dros... 60 5e-07 BC170308_1(BC170308|pid:none) Xenopus laevis homer 1b-1, mRNA (c... 60 5e-07 AK137151_1(AK137151|pid:none) Mus musculus adult male urinary bl... 60 5e-07 (Q9Z2X5) RecName: Full=Homer protein homolog 3; Short=H... 60 5e-07 (Q9Z214) RecName: Full=Homer protein homolog 1; AltName: Full=PS... 60 5e-07 AB007688_1(AB007688|pid:none) Rattus norvegicus mRNA for Vesl-1L... 60 5e-07 (Q9Z2Y3) RecName: Full=Homer protein homolog 1; AltName: Full=VA... 60 5e-07 AB019478_1(AB019478|pid:none) Mus musculus mRNA for Vesl-1S, com... 60 5e-07 AY189941_1(AY189941|pid:none) Homo sapiens HOMER1H (HOMER1) mRNA... 60 5e-07 (Q2KJ56) RecName: Full=Homer protein homolog 1; &BC105509_1(BC1... 60 5e-07 U92079_1(U92079|pid:none) Rattus norvegicus GLGF-domain protein ... 60 5e-07 AB019479_1(AB019479|pid:none) Mus musculus mRNA for Vesl-1L, com... 60 5e-07 CS301482_1(CS301482|pid:none) Sequence 1 from Patent EP1662255. 60 5e-07 BC155436_1(BC155436|pid:none) Xenopus tropicalis homer homolog 1... 60 5e-07 BC121670_1(BC121670|pid:none) Xenopus tropicalis homer homolog 3... 59 7e-07 AE014187_22(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 59 7e-07 (Q9QWW1) RecName: Full=Homer protein homolog 2; Short=H... 59 1e-06 AB017136_1(AB017136|pid:none) Mus musculus mRNA for cupidin, com... 59 1e-06 AY888474_1(AY888474|pid:none) Synthetic construct Homo sapiens c... 57 2e-06 BC045262_1(BC045262|pid:none) Xenopus laevis homer homolog 3 (Dr... 57 2e-06 PDBN(1QC6)A MOL_ID: 1;MOL_ID: 1; MOLECULE: EVH1 DOMAIN FROM ENA/... 57 2e-06 BC076306_1(BC076306|pid:none) Danio rerio homer homolog 1 (Droso... 57 3e-06 BC070922_1(BC070922|pid:none) Rattus norvegicus homer homolog 3 ... 56 6e-06 Y18894_1(Y18894|pid:none) Homo sapiens mRNA for Homer-3B protein. 56 6e-06 AM910995_449(AM910995|pid:none) Plasmodium knowlesi strain H chr... 56 6e-06 CR626903_3(CR626903|pid:none) Zebrafish DNA sequence from clone ... 55 9e-06 CR626903_1(CR626903|pid:none) Zebrafish DNA sequence from clone ... 55 9e-06 BC077128_1(BC077128|pid:none) Danio rerio homer homolog 1 (Droso... 54 4e-05 CR626903_2(CR626903|pid:none) Zebrafish DNA sequence from clone ... 54 4e-05 (Q7RXQ1) RecName: Full=COP9 signalosome complex subunit 1; ... 54 4e-05 AE014134_1208(AE014134|pid:none) Drosophila melanogaster chromos... 53 5e-05 AE014134_1206(AE014134|pid:none) Drosophila melanogaster chromos... 53 5e-05 AE014134_1207(AE014134|pid:none) Drosophila melanogaster chromos... 53 5e-05 Y18893_1(Y18893|pid:none) Chlorocebus aethiops mRNA for COS-7 de... 49 0.001 AB378069_1(AB378069|pid:none) Gryllus bimaculatus ena gene for E... 47 0.003 AB171344_1(AB171344|pid:none) Macaca fascicularis brain cDNA clo... 47 0.003 AB173007_1(AB173007|pid:none) Macaca fascicularis brain cDNA clo... 47 0.004 AF131766_1(AF131766|pid:none) Homo sapiens clone 24860 Ena-VASP ... 47 0.004 (Q9GS00) RecName: Full=COP9 signalosome complex subunit 1; ... 46 0.006 (Q9LQR8) RecName: Full=Probable 26S proteasome non-ATPase regula... 45 0.013 (Q9VVU5) RecName: Full=COP9 signalosome complex subunit 1b; ... 44 0.022 AL590445_157(AL590445|pid:none) chromosome V of strain GB-M1 of ... 44 0.022 AC025722_6(AC025722|pid:none) Caenorhabditis elegans cosmid Y50D... 44 0.028 BT052416_1(BT052416|pid:none) Medicago truncatula clone MTYFD_FE... 43 0.063 AY814391_1(AY814391|pid:none) Schistosoma japonicum SJCHGC05532 ... 42 0.11 EF145443_1(EF145443|pid:none) Populus trichocarpa clone WS01124_... 42 0.14 (P93768) RecName: Full=Probable 26S proteasome non-ATPase regula... 41 0.18 AF129080_1(AF129080|pid:none) Drosophila melanogaster COP9 signa... 41 0.24 AF165530_1(AF165530|pid:none) Ovis aries homer protein mRNA, par... 41 0.24 AB031299_1(AB031299|pid:none) Oryza sativa Japonica Group Os21D7... 41 0.24 AE017345_56(AE017345|pid:none) Cryptococcus neoformans var. neof... 41 0.24 BC046847_1(BC046847|pid:none) Xenopus laevis homer homolog 2 (Dr... 40 0.31 EU963115_1(EU963115|pid:none) Zea mays clone 257809 26S proteaso... 40 0.31 (Q9LNU4) RecName: Full=Probable 26S proteasome non-ATPase regula... 40 0.31 DQ311361_1(DQ311361|pid:none) Bombyx mori G protein pathway supp... 40 0.31 AC022472_3(AC022472|pid:none) Sequence of BAC T20H2 from Arabido... 40 0.31 DQ423014_1(DQ423014|pid:none) Solanum lycopersicoides cultivar L... 40 0.41 DQ423008_1(DQ423008|pid:none) Solanum habrochaites cultivar LA17... 40 0.41 BC155342_1(BC155342|pid:none) Danio rerio si:ch211-255l12.2, mRN... 40 0.41 EU962333_1(EU962333|pid:none) Zea mays clone 241842 26S proteaso... 40 0.41 AF285832_1(AF285832|pid:none) Arabidopsis thaliana eukaryotic in... 40 0.54 AL137080_14(AL137080|pid:none) Arabidopsis thaliana DNA chromoso... 40 0.54 CP000584_10(CP000584|pid:none) Ostreococcus lucimarinus CCE9901 ... 39 0.70 AK223178_1(AK223178|pid:none) Homo sapiens mRNA for COP9 signalo... 39 0.70 AM910987_226(AM910987|pid:none) Plasmodium knowlesi strain H chr... 39 0.91 (Q9US13) RecName: Full=Probable 26S proteasome regulatory subuni... 39 0.91 AC146790_1(AC146790|pid:none) Medicago truncatula clone mth2-123... 39 0.91 AF129082_1(AF129082|pid:none) Drosophila melanogaster COP9 signa... 39 0.91 AB070258_1(AB070258|pid:none) Oryza sativa Japonica Group OsRPN3... 39 0.91 (Q54NQ0) RecName: Full=26S proteasome non-ATPase regulatory subu... 39 0.91 (Q9V345) RecName: Full=COP9 signalosome complex subunit 4; ... 39 0.91 AK061287_1(AK061287|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.91 AP003912_13(AP003912|pid:none) Oryza sativa Japonica Group genom... 39 0.91 CR954204_14(CR954204|pid:none) Ostreococcus tauri strain OTTH059... 39 1.2 (Q5R648) RecName: Full=COP9 signalosome complex subunit 4; ... 39 1.2 (O88544) RecName: Full=COP9 signalosome complex subunit 4; ... 39 1.2 AK001210_1(AK001210|pid:none) Homo sapiens cDNA FLJ10348 fis, cl... 39 1.2 (Q68FS2) RecName: Full=COP9 signalosome complex subunit 4; ... 39 1.2 DQ423007_1(DQ423007|pid:none) Solanum arcanum cultivar LA1708. 39 1.2 (Q3SZA0) RecName: Full=COP9 signalosome complex subunit 4; ... 39 1.2 AJ720334_1(AJ720334|pid:none) Gallus gallus mRNA for hypothetica... 39 1.2 (A7Y521) RecName: Full=COP9 signalosome complex subunit 4; ... 39 1.2 DQ423009_1(DQ423009|pid:none) Solanum lycopersicum cultivar TA20... 39 1.2 FN392319_377(FN392319|pid:none) Pichia pastoris GS115 chromosome... 38 1.6 BC123027_1(BC123027|pid:none) Xenopus tropicalis hypothetical pr... 38 1.6 DQ423010_1(DQ423010|pid:none) Solanum chilense cultivar LA2930. 38 1.6 BT034742_1(BT034742|pid:none) Zea mays full-length cDNA clone ZM... 38 2.0 AF255679_1(AF255679|pid:none) Arabidopsis thaliana eIF3e mRNA, c... 38 2.0 BT047473_1(BT047473|pid:none) Salmo salar clone ssal-eve-557-069... 37 3.5 BC131887_1(BC131887|pid:none) Xenopus laevis COP9 (constitutive ... 37 3.5 AK342420_1(AK342420|pid:none) Acyrthosiphon pisum ACYPI001319 mR... 37 3.5 CP001279_454(CP001279|pid:none) Nautilia profundicola AmH, compl... 37 3.5 BX548174_1425(BX548174|pid:none) Prochlorococcus marinus MED4 co... 37 4.5 (Q5Y171) RecName: Full=Sprouty-related, EVH1 domain-containing p... 37 4.5 CU928171_152(CU928171|pid:none) Kluyveromyces thermotolerans str... 36 5.9 CP001205_592(CP001205|pid:none) Borrelia burgdorferi ZS7, comple... 36 5.9 BX897685_6(BX897685|pid:none) Zebrafish DNA sequence from clone ... 36 5.9 (B4KT65) RecName: Full=Eukaryotic translation initiation factor ... 36 5.9 (Q54KZ8) RecName: Full=Eukaryotic translation initiation factor ... 36 7.7 AM910991_270(AM910991|pid:none) Plasmodium knowlesi strain H chr... 36 7.7 EU565585_1(EU565585|pid:none) Uncultured soil bacterium clone gl... 36 7.7
>(O01422) RecName: Full=COP9 signalosome complex subunit 2; Short=Signalosome subunit 2; &U97190_1(U97190|pid:none) Length = 495
Score = 228 bits (581), Expect(2) = e-101 Identities = 109/191 (57%), Positives = 147/191 (76%) Frame = +3
Query: 1707 KSAIPHPRIMGIIRECGGKMHMAEKEWEKAHTDFFEAFKNYDEAGNSRRIQCLKYLVLAC 1886 KSAIPHP I+G IRECGGKMH+ + + AHTDFFEAFKNYDE+G+ RR CLKYLVLA Sbjct: 225 KSAIPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAFKNYDESGSPRRTTCLKYLVLAN 284
Query: 1887 MLMLSTINPFDSTEAKPYKNDPDILAMTNLVMAYEKNDIYAFEKILKDNRKTIMDDPFIR 2066 ML+ S INPFDS EAKP+KN+P+I+AMT +V AY+ NDI AFE+I+ ++ +IM DPFIR Sbjct: 285 MLIKSDINPFDSQEAKPFKNEPEIVAMTQMVQAYQDNDIQAFEQIMAAHQDSIMADPFIR 344
Query: 2067 MYIEDLLRNIRTQVLLKLLKPYTRIRISFISKELNIPSSDVESLLVSLILDNKIRGSIDQ 2246 + E+L+ NIRTQVLL+L++PYT +RIS++S++L + +V LLV ILD+ + I++ Sbjct: 345 EHTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLVDAILDDGLEAKINE 404
Query: 2247 VNQQLELDTAK 2279 + +E+ K Sbjct: 405 ESGMIEMPKNK 415
Score = 167 bits (424), Expect(2) = e-101 Identities = 86/190 (45%), Positives = 128/190 (67%), Gaps = 1/190 (0%) Frame = +2
Query: 1112 VEIENQYYNSKGL-IDESIPDAIKSYEKVVDLENGEKGEWGFKALKKITKLYFRIGDFDN 1288 V++ENQYY +KGL D + +AIKS+EKV++LE GEKGEWGFKALK++ K+ F + Sbjct: 26 VDMENQYYTAKGLRSDGKLDEAIKSFEKVLELE-GEKGEWGFKALKQMIKITFGQNRLEK 84
Query: 1289 MLESFKKFLPYTKSSASSNYIEKGINSVLDMVSSSNTIELDMIQKVFDLTLKSLLDTKNE 1468 MLE +++ L Y KS+ + NY EK IN++LD +S+S ++D++Q ++ TL +L D KNE Sbjct: 85 MLEYYRQLLTYIKSAVTKNYSEKSINAILDYISTSR--QMDLLQHFYETTLDALKDAKNE 142
Query: 1469 RVWFRTNXXXXXXXXXXXXYGRLAKILRDLHKSCELEDGTDDQKKGSQLVDIYALEIPNV 1648 R+WF+TN + +L KI++ L SC+ E G +DQ+KG+QL++IYALEI Sbjct: 143 RLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCKNEQGEEDQRKGTQLLEIYALEIQMY 202
Query: 1649 YRNQNQ*EIK 1678 +N +K Sbjct: 203 TEQKNNKALK 212
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 2,712,951,027 Number of extensions: 44461453 Number of successful extensions: 109865 Number of sequences better than 10.0: 257 Number of HSP's gapped: 109500 Number of HSP's successfully gapped: 297 Length of query: 826 Length of database: 1,051,180,864 Length adjustment: 137 Effective length of query: 689 Effective length of database: 607,772,281 Effective search space: 418755101609 Effective search space used: 418755101609 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
1 |
VF (FL, S) |
6 |
AH (FL, L) |
0 |
AF (FL, S) |
16 |
SL (DIR, L) |
8 |
SS (DIR, S) |
5 |
SH (FL, L) |
0 |
SF (FL, S) |
6 |
CH (FL, L) |
1 |
CF (FL, S) |
2 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
3 |
FC-IC (SUB) |
0 |