Contig-U15654-1
Contig ID Contig-U15654-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15654-1 (Contig-U15654-1Q) /CSM_Contig/Contig-U15654-1Q.Seq.d
TATTAAAACAACAAGAGGAGTTTTTAAAAAGCGGATCTAAACCCTCAGTT
TCGACAGTCACAAGAGGACCACCACCAATTGTTCTTTCAAAATCACAAGC
AAAACAAAGAGAACAAGAAACTACTGTTAATACATCAACATCATCAACAG
CAACAGCAACAGTAACAAGTAAATTTAAGCATCAAAAATTATCAAATAAT
GGTATACCAATTATAGATGAACCAATGGGAGAAAGAGATGTTGTATCGTT
ATCCGATGATTTAAATCATTTAAAATCAAAATCTTCAAACTTAACATCAA
CTTCAAGATTTAAATTAAATAGTCAAAAAAAAAAACAACAACAACAAGAT
GAACCAACAATTGAAGAAATGGATGATGTACAAGAGGAGGAGGAAGATGT
ATTCGATGAGAAAAGAGATGTTCATATTACAAGTGTAATTACAAATATTT
ATGAAAGAGAT----------GGATTTAAAGAAACAATATTAAATTTTAG
AGAGTGGAGATTTAATTTCACAGGTGAAATCATTCAAAGAGGATCAAGTA
CACCAACATCACAAGGATTACATCATCATGGATCAGAAGCAGGTGAAGCA
GGTTATACATTGAATGAAATAATTATGTTAATTAAAAGTTCAAATCATTC
TCAAAAATGTATTGCATTAAAAACTTTAACTTTTATTTTACAAAAAGTTC
ATAATGGTTCATATGGTTCATTTAATAAATTACAATTAATTGATGAAATA
TTAAAATTAAAGATACCAAGATTATTAAGAATTTCAATTGATTCACAAGT
ACCATCAATATTGATATCTGCATTAACATGTATTCATGCATTGATTGTAC
CAACTATTAAAGAGAATGCATATGAAATGATTGAATCACGTAGTCATAGA
GCATATGAAACCATTTCAATTAAACCAATATCAATGGAATCAAAGAAACA
AAAGAATGAAGAAGAGGAACCAGAGAAAGATGATGATGAAAAATGTCAAT
TGGATTTAATTAGAGGTTTAGTTGATATGGGTATAACAAATAGGTTGGTC
TATTTAATGGATAATGAAGCTAAATCATCAGATACTTTATCAATGGTTAC
AAGATCCATTCTTTAAATCATTCTTATCAAGATTAAATTTAATTTTAGAT
ATTTTCATTCATTTCACTAGACATTCAAATCAAATCACTGAAGAGATATT
CAATAGTGGTGGTAATAATACAACTGATTTAATATTTAATTCAATTAAAT
ATTCATTAACAGATTTAGAGCTATCATTACGTTATTTAATTAATGAAAAT
AGTAGTAGTGGTGCTGGTAGTGGTGGTGCTGATCAACAGAATGAAAATGA
AATTGGATTAATTAAAATTTTAAAGAATATTCAAATTAAAAGTATTAGAT
TATTAAGAAGAGTATCACAATCATCAAAACATTGTGCTGATATAATGACA
GCATCATCATATGATCTATTTACATTTATAAAGGAAAAGTTTTTACAATG
TAATGATAATCAAATCTTAATGGAATATATTAAATTATTTAGAATTTGGT
TCATTTATCGTATTGAAGTACCATCATTCTTTTCAGAGATTTTACCAACT
TTAAATCGTTATGTTTTAGAATTTACNAAATTTTAAATGTGAAGCTTATC
ATTTATCAATACAAAACCATTTTCATCAGAGAACAACAAGA

Gap gap included
Contig length 1681
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 3076085
End point 3074401
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 4
Link to clone list U15654
List of clone(s)

est1=AFL375F,1,337
est2=SLD149F,183,461
est3=SLD149Z,462,995
est4=AFL375Z,785,1681
Translated Amino Acid sequence
LKQQEEFLKSGSKPSVSTVTRGPPPIVLSKSQAKQREQETTVNTSTSSTATATVTSKFKH
QKLSNNGIPIIDEPMGERDVVSLSDDLNHLKSKSSNLTSTSRFKLNSQKKKQQQQDEPTI
EEMDDVQEEEEDVFDEKRDVHITSVITNIYERD---

---GFKETILNFREWRFNFTGEIIQRGSSTPTSQGLHHHGSEAGEAGYTLNEIIMLIKSS
NHSQKCIALKTLTFILQKVHNGSYGSFNKLQLIDEILKLKIPRLLRISIDSQVPSILISA
LTCIHALIVPTIKENAYEMIESRSHRAYETISIKPISMESKKQKNEEEEPEKDDDEKCQL
DLIRGLVDMGITNRLVYLMDNEAKSSDTLSMVTRSIL*iilikikfnfryfhsfh*tfks
nh*rdiq*ww**yn*fni*fn*ifinrfraiitlfn**k***wcw*wwc*ste*k*nwin
*nfkeysn*ky*iikksitiiktlc*yndsiii*siyiykgkvftm***snlngiy*ii*
nlvhlsy*stiilfrdftnfkslcfriyxilnvkliiyqyktifireqq


Translated Amino Acid sequence (All Frames)
Frame A:
y*nnkrsf*kadlnpqfrqsqedhhqlffqnhkqnkenkklllihqhhqqqqqq*qvnls
iknyqimvyql*mnqwekemlyrypmi*ii*nqnlqt*hqlqdln*ivkkknnnnkmnqq
lkkwmmykrrrkmysmrkemfilqv*lqifmke---

---GFKETILNFREWRFNFTGEIIQRGSSTPTSQGLHHHGSEAGEAGYTLNEIIMLIKSS
NHSQKCIALKTLTFILQKVHNGSYGSFNKLQLIDEILKLKIPRLLRISIDSQVPSILISA
LTCIHALIVPTIKENAYEMIESRSHRAYETISIKPISMESKKQKNEEEEPEKDDDEKCQL
DLIRGLVDMGITNRLVYLMDNEAKSSDTLSMVTRSIL*iilikikfnfryfhsfh*tfks
nh*rdiq*ww**yn*fni*fn*ifinrfraiitlfn**k***wcw*wwc*ste*k*nwin
*nfkeysn*ky*iikksitiiktlc*yndsiii*siyiykgkvftm***snlngiy*ii*
nlvhlsy*stiilfrdftnfkslcfriyxilnvkliiyqyktifireqq

Frame B:
ikttrgvfkkri*tlsfdshkrtttncsfkitsktkrtrnyc*yiniinsnsnsnk*i*a
skiik*wytnyr*tngrkrccivir*fksfkikifklninfki*ik*skkkttttr*tnn
*rng*ctrgggrcir*ekrcsyykcnykyl*kr---

---dlkkqy*ilesgdlisqvksfkedqvhqhhkdyiimdqkqvkqvih*mk*lc*lkvq
iilknvlh*kl*llfykkfimvhmvhlinyn*lmky*n*ryqdy*efqlihkyhqy*ylh
*hvfmh*lyqllkrmhmk*lnhvviehmkpfqlnqyqwnqrnkrmkkrnqrkmmmknvnw
i*lev*liwv*qigwsi*wimklnhqilyqwlqdpffksflsrlnlildifihftrhsnq
iteeifnsggnnttdlifnsikysltdlelslrylinensssgagsggadqqneneigli
kilkniqiksirllrrvsqsskhcadimtassydlftfikekflqcndnqilmeyiklfr
iwfiyrievpsffseilptlnryvleftkf*m*slsfintkpfssennk

Frame C:
LKQQEEFLKSGSKPSVSTVTRGPPPIVLSKSQAKQREQETTVNTSTSSTATATVTSKFKH
QKLSNNGIPIIDEPMGERDVVSLSDDLNHLKSKSSNLTSTSRFKLNSQKKKQQQQDEPTI
EEMDDVQEEEEDVFDEKRDVHITSVITNIYERD---

---i*rnnikf*rvei*fhr*nhskrikytnitritsswirsr*srlyie*nnyvn*kfk
sfskmyciknfnfyftkss*wfiwfi**itin**nikikdtkiiknfn*ftstinidici
nmyscidctny*reci*nd*it*s*si*nhfn*tningiketke*rrgtrer***kmsig
fn*rfs*ygynk*vglfng**s*iiryfingykihslnhsyqd*i*f*ifsfisldiqik
slkrysivvviiqli*yliqlnih*qi*syhyvi*lmkivvvvlvvvvlinrmkmkld*l
kf*rifklkvldy*eeyhnhqnivli**qhhhmiylhl*rksfynvmiiks*wnilnyle
fgsfivlkyhhsfqrfyql*ivmf*nlxnfkceayhlsiqnhfhqrttr

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15654-1 (Contig-U15654-1Q)
/CSM_Contig/Contig-U15654-1Q.Seq.d
(1691 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15654-1 (Contig-U15654-1Q) /CSM_Contig/Conti... 3221 0.0
Contig-U08006-1 (Contig-U08006-1Q) /CSM_Contig/Conti... 48 5e-05
Contig-U10875-1 (Contig-U10875-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U10512-1 (Contig-U10512-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U14511-1 (Contig-U14511-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U04099-1 (Contig-U04099-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U01465-1 (Contig-U01465-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U15813-1 (Contig-U15813-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U15603-1 (Contig-U15603-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U13396-1 (Contig-U13396-1Q) /CSM_Contig/Conti... 42 0.003

>Contig-U15654-1 (Contig-U15654-1Q) /CSM_Contig/Contig-U15654-1Q.Seq.d
Length = 1691

Score = 3221 bits (1625), Expect = 0.0
Identities = 1680/1691 (99%)
Strand = Plus / Plus


Query: 1 tattaaaacaacaagaggagtttttaaaaagcggatctaaaccctcagtttcgacagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattaaaacaacaagaggagtttttaaaaagcggatctaaaccctcagtttcgacagtca 60


Query: 61 caagaggaccaccaccaattgttctttcaaaatcacaagcaaaacaaagagaacaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagaggaccaccaccaattgttctttcaaaatcacaagcaaaacaaagagaacaagaaa 120


Query: 121 ctactgttaatacatcaacatcatcaacagcaacagcaacagtaacaagtaaatttaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctactgttaatacatcaacatcatcaacagcaacagcaacagtaacaagtaaatttaagc 180


Query: 181 atcaaaaattatcaaataatggtataccaattatagatgaaccaatgggagaaagagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcaaaaattatcaaataatggtataccaattatagatgaaccaatgggagaaagagatg 240


Query: 241 ttgtatcgttatccgatgatttaaatcatttaaaatcaaaatcttcaaacttaacatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtatcgttatccgatgatttaaatcatttaaaatcaaaatcttcaaacttaacatcaa 300


Query: 301 cttcaagatttaaattaaatagtcnnnnnnnnnnncaacaacaacaagatgaaccaacaa 360
|||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 301 cttcaagatttaaattaaatagtcaaaaaaaaaaacaacaacaacaagatgaaccaacaa 360


Query: 361 ttgaagaaatggatgatgtacaagaggaggaggaagatgtattcgatgagaaaagagatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgaagaaatggatgatgtacaagaggaggaggaagatgtattcgatgagaaaagagatg 420


Query: 421 ttcatattacaagtgtaattacaaatatttatgaaagagatnnnnnnnnnnggatttaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcatattacaagtgtaattacaaatatttatgaaagagatnnnnnnnnnnggatttaaa 480


Query: 481 gaaacaatattaaattttagagagtggagatttaatttcacaggtgaaatcattcaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaacaatattaaattttagagagtggagatttaatttcacaggtgaaatcattcaaaga 540


Query: 541 ggatcaagtacaccaacatcacaaggattacatcatcatggatcagaagcaggtgaagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggatcaagtacaccaacatcacaaggattacatcatcatggatcagaagcaggtgaagca 600


Query: 601 ggttatacattgaatgaaataattatgttaattaaaagttcaaatcattctcaaaaatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggttatacattgaatgaaataattatgttaattaaaagttcaaatcattctcaaaaatgt 660


Query: 661 attgcattaaaaactttaacttttattttacaaaaagttcataatggttcatatggttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attgcattaaaaactttaacttttattttacaaaaagttcataatggttcatatggttca 720


Query: 721 tttaataaattacaattaattgatgaaatattaaaattaaagataccaagattattaaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tttaataaattacaattaattgatgaaatattaaaattaaagataccaagattattaaga 780


Query: 781 atttcaattgattcacaagtaccatcaatattgatatctgcattaacatgtattcatgca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atttcaattgattcacaagtaccatcaatattgatatctgcattaacatgtattcatgca 840


Query: 841 ttgattgtaccaactattaaagagaatgcatatgaaatgattgaatcacgtagtcataga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttgattgtaccaactattaaagagaatgcatatgaaatgattgaatcacgtagtcataga 900


Query: 901 gcatatgaaaccatttcaattaaaccaatatcaatggaatcaaagaaacaaaagaatgaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcatatgaaaccatttcaattaaaccaatatcaatggaatcaaagaaacaaaagaatgaa 960


Query: 961 gaagaggaaccagagaaagatgatgatgaaaaatgtcaattggatttaattagaggttta 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gaagaggaaccagagaaagatgatgatgaaaaatgtcaattggatttaattagaggttta 1020


Query: 1021 gttgatatgggtataacaaataggttggtctatttaatggataatgaagctaaatcatca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gttgatatgggtataacaaataggttggtctatttaatggataatgaagctaaatcatca 1080


Query: 1081 gatactttatcaatggttacaagatccattctttaaatcattcttatcaagattaaattt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gatactttatcaatggttacaagatccattctttaaatcattcttatcaagattaaattt 1140


Query: 1141 aattttagatattttcattcatttcactagacattcaaatcaaatcactgaagagatatt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aattttagatattttcattcatttcactagacattcaaatcaaatcactgaagagatatt 1200


Query: 1201 caatagtggtggtaataatacaactgatttaatatttaattcaattaaatattcattaac 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 caatagtggtggtaataatacaactgatttaatatttaattcaattaaatattcattaac 1260


Query: 1261 agatttagagctatcattacgttatttaattaatgaaaatagtagtagtggtgctggtag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 agatttagagctatcattacgttatttaattaatgaaaatagtagtagtggtgctggtag 1320


Query: 1321 tggtggtgctgatcaacagaatgaaaatgaaattggattaattaaaattttaaagaatat 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tggtggtgctgatcaacagaatgaaaatgaaattggattaattaaaattttaaagaatat 1380


Query: 1381 tcaaattaaaagtattagattattaagaagagtatcacaatcatcaaaacattgtgctga 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tcaaattaaaagtattagattattaagaagagtatcacaatcatcaaaacattgtgctga 1440


Query: 1441 tataatgacagcatcatcatatgatctatttacatttataaaggaaaagtttttacaatg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tataatgacagcatcatcatatgatctatttacatttataaaggaaaagtttttacaatg 1500


Query: 1501 taatgataatcaaatcttaatggaatatattaaattatttagaatttggttcatttatcg 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 taatgataatcaaatcttaatggaatatattaaattatttagaatttggttcatttatcg 1560


Query: 1561 tattgaagtaccatcattcttttcagagattttaccaactttaaatcgttatgttttaga 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tattgaagtaccatcattcttttcagagattttaccaactttaaatcgttatgttttaga 1620


Query: 1621 atttacnaaattttaaatgtgaagcttatcatttatcaatacaaaaccattttcatcaga 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 atttacnaaattttaaatgtgaagcttatcatttatcaatacaaaaccattttcatcaga 1680


Query: 1681 gaacaacaaga 1691
|||||||||||
Sbjct: 1681 gaacaacaaga 1691


Score = 38.2 bits (19), Expect = 0.043
Identities = 22/23 (95%)
Strand = Plus / Minus


Query: 1231 aatatttaattcaattaaatatt 1253
||||||||||| |||||||||||
Sbjct: 1253 aatatttaattgaattaaatatt 1231


>Contig-U08006-1 (Contig-U08006-1Q) /CSM_Contig/Contig-U08006-1Q.Seq.d
Length = 1480

Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 939 atcaaagaaacaaaagaatgaaga 962
||||||||||||||||||||||||
Sbjct: 411 atcaaagaaacaaaagaatgaaga 434


>Contig-U10875-1 (Contig-U10875-1Q) /CSM_Contig/Contig-U10875-1Q.Seq.d
Length = 2671

Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1206 gtggtggtaataatacaactgat 1228
|||||||||||||||||||||||
Sbjct: 2591 gtggtggtaataatacaactgat 2613


Score = 34.2 bits (17), Expect = 0.68
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 195 aataatggtataccaattata 215
||||||||||||||| |||||
Sbjct: 260 aataatggtataccatttata 280


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 67,509
Number of Sequences: 8402
Number of extensions: 67509
Number of successful extensions: 8390
Number of sequences better than 10.0: 487
length of query: 1691
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1675
effective length of database: 7,941,110
effective search space: 13301359250
effective search space used: 13301359250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 4
Homology vs DNA
Query= Contig-U15654-1 (Contig-U15654-1Q) /CSM_Contig/Contig-U15654-1Q.Seq.d
(1691 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ345474) Dictyostelium discoideum cDNA clone:dda23f19, 3' ... 559 0.0 2
(BJ346938) Dictyostelium discoideum cDNA clone:dda25j14, 3' ... 910 0.0 2
(AU052327) Dictyostelium discoideum slug cDNA, clone SLD149. 910 0.0 1
(BJ329601) Dictyostelium discoideum cDNA clone:dda25j14, 5' ... 642 e-179 1
(BJ328332) Dictyostelium discoideum cDNA clone:dda23f19, 5' ... 642 e-179 1
(AU061095) Dictyostelium discoideum slug cDNA, clone SLD149. 281 e-140 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 46 5e-09 19
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 38 2e-07 21
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 36 2e-07 14
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 38 3e-06 21
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 5e-06 19
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 44 2e-05 14
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 4e-05 17
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 46 1e-04 13
(AY740525) Tetrahymena thermophila cadmium-inducible metallo... 42 2e-04 5
(X95276) Plasmodium falciparum complete gene map of plastid-... 34 2e-04 8
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 2e-04 16
(EH238864) JGI_ACAC18996.fwd ACAC Phakopsora pachyrhizi TW72... 60 3e-04 1
(EH238319) JGI_ACAC19087.fwd ACAC Phakopsora pachyrhizi TW72... 60 3e-04 1
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 4e-04 16
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 36 5e-04 21
(AC207705) Glycine tomentella clone gtd1-109m5, WORKING DRAF... 40 0.001 8
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 44 0.001 6
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 38 0.001 15
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 0.001 19
(CP000049) Borrelia turicatae 91E135, complete genome. 32 0.001 23
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g... 44 0.002 24
(AL422462) T7 end of clone AZ0AA001E01 of library AZ0AA from... 56 0.003 2
(CU638743) Podospora anserina genomic DNA chromosome 3, supe... 56 0.004 1
(AF505658) Podospora anserina IDI-1 precursor (idi-1) gene, ... 56 0.004 1
(EH240287) JGI_ACAC19792.fwd ACAC Phakopsora pachyrhizi TW72... 56 0.004 1
(AC207183) Eulemur macaco macaco clone CH273-521P8, WORKING ... 48 0.005 7
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.005 16
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.006 17
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 0.006 20
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 38 0.007 11
(AB030033) Dictyostelium discoideum gene for AmiB, complete ... 38 0.008 5
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.010 22
(AX344566) Sequence 17 from Patent WO0200932. 38 0.011 16
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge... 34 0.013 8
(GE802111) EST_scau_evk_892976 scauevk mixed_tissue Sebastes... 52 0.013 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 42 0.017 10
(AC140311) Mus musculus BAC clone RP23-392M3 from chromosome... 54 0.018 1
(CU463962) Wallaby DNA sequence from clone MEKBa-241L16. 54 0.018 1
(AC108955) Rattus norvegicus clone CH230-6F10, *** SEQUENCIN... 54 0.018 1
(CT847686) Oryza sativa Indica Group EST sequence:OSIGCRA208... 54 0.018 1
(EX846750) CBNC6554.fwd CBNC Phycomyces blakesleeanus NRRL15... 54 0.018 1
(EX845781) CBNC6068.fwd CBNC Phycomyces blakesleeanus NRRL15... 54 0.018 1
(CU302233) S.lycopersicum DNA sequence from clone SL_MboI-13... 38 0.025 8
(FF611839) G825P5162RH12.T0 Acorn worm normalized gastrula p... 52 0.025 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 34 0.025 16
(BJ353188) Dictyostelium discoideum cDNA clone:dda49d09, 3' ... 42 0.026 3
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 40 0.031 13
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 0.032 15
(AL844507) Plasmodium falciparum chromosome 8. 36 0.034 22
(CP000029) Staphylococcus epidermidis RP62A, complete genome. 44 0.035 23
(AF404306) Rhizophydium sp. 136 mitochondrion, complete genome. 42 0.038 9
(AY061892) Tetrahymena thermophila metallothionein (MTT1) ge... 42 0.042 4
(X96869) D.discoideum dokA gene. 36 0.043 5
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 36 0.048 20
(EK203375) 1095460065268 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.052 3
(AC165276) Medicago truncatula chromosome 2 BAC clone mth2-1... 32 0.052 12
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 32 0.056 8
(AC115578) Dictyostelium discoideum chromosome 2 map complem... 42 0.069 5
(AF020538) Ustilago maydis MADS-box homolog Umc1 (umc1) gene... 52 0.070 1
(BH537218) BOGVI14TR BOGV Brassica oleracea genomic clone BO... 52 0.070 1
(DX719874) 2245014 VV03 Ustilago maydis genomic clone 883392... 52 0.070 1
(DX605355) 3565542 UMF2 Ustilago maydis genomic clone 154598... 52 0.070 1
(BZ008856) oei44g09.g1 B.oleracea002 Brassica oleracea genom... 52 0.070 1
(BH946010) obu79d05.b1 B.oleracea002 Brassica oleracea genom... 52 0.070 1
(DN810528) 74327318 Sea Urchin primary mesenchyme cell cDNA ... 52 0.070 1
(FD462548) LARVS89TR Haematobia irritans 1st Instar Larvae H... 52 0.070 1
(FD462547) LARVS89TF Haematobia irritans 1st Instar Larvae H... 52 0.070 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 40 0.070 17
(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (... 46 0.070 2
(CP000728) Clostridium botulinum F str. Langeland, complete ... 36 0.076 20
(AC166146) Medicago truncatula clone mth2-174g5, complete se... 34 0.080 9
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 42 0.080 14
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 0.082 13
(BX164376) Danio rerio genomic clone DKEY-156F18, genomic su... 40 0.082 3
(AQ450541) 500012H12.x1 CpIOWAM13mp18gDNA1 Cryptosporidium p... 44 0.083 2
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ... 34 0.090 16
(CX585919) TTE00028085 Amplicon Express - Conjugative Form T... 42 0.095 3
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 36 0.10 22
(EK222352) 1095460145102 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.10 3
(CF441562) EST677907 normalized cDNA library of onion Allium... 50 0.11 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.11 12
(AC117062) Rattus norvegicus clone CH230-177D13, *** SEQUENC... 34 0.16 2
(AC106979) Rattus norvegicus clone CH230-205F12, WORKING DRA... 34 0.16 2
(AE017263) Mesoplasma florum L1 complete genome. 34 0.19 19
(D36063) Caenorhabditis elegans cDNA clone yk28f7 : 5' end, ... 38 0.19 2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.22 10
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 32 0.24 17
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 34 0.24 24
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 32 0.25 19
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 32 0.25 10
(FF790298) XABT86279.fwd Gateway compatible cien cDNA librar... 42 0.25 3
(FK073726) XABT132097.b1 Gateway compatible cien cDNA librar... 42 0.26 3
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 38 0.27 22
(AM231517) Brassica oleracea var. alboglabra flc1 gene for f... 34 0.27 5
(CT027787) Zebrafish DNA sequence from clone CH211-12B16 in ... 50 0.28 1
(U05118) Simian immunodeficiency virus SIVRhE543 clone 2-11 ... 50 0.28 1
(AL669816) Mouse DNA sequence from clone RP23-266C4 on chrom... 50 0.28 1
(AC122210) Mus musculus BAC clone RP23-96G7 from chromosome ... 50 0.28 1
(AL353993) Arabidopsis thaliana DNA chromosome 5, BAC clone ... 50 0.28 1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ... 50 0.28 1
(AC134154) Rattus norvegicus clone CH230-10I12, *** SEQUENCI... 50 0.28 1
(AC129356) Rattus norvegicus clone CH230-286G14, WORKING DRA... 50 0.28 1
(AC129350) Rattus norvegicus clone CH230-334P23, WORKING DRA... 50 0.28 1
(AC128133) Rattus norvegicus clone CH230-396J24, WORKING DRA... 50 0.28 1
(AC127156) Rattus norvegicus clone CH230-7B10, *** SEQUENCIN... 50 0.28 1
(AC121212) Rattus norvegicus clone CH230-131A24, *** SEQUENC... 50 0.28 1
(AC119130) Rattus norvegicus clone CH230-414I23, *** SEQUENC... 50 0.28 1
(AC115510) Rattus norvegicus clone CH230-383C9, *** SEQUENCI... 50 0.28 1
(AC115269) Rattus norvegicus clone CH230-218J11, *** SEQUENC... 50 0.28 1
(AC112887) Rattus norvegicus clone CH230-214H3, WORKING DRAF... 50 0.28 1
(AC112086) Rattus norvegicus clone CH230-332D11, *** SEQUENC... 50 0.28 1
(AC095438) Rattus norvegicus clone CH230-4H15, *** SEQUENCIN... 50 0.28 1
(AC095424) Rattus norvegicus clone CH230-7A8, *** SEQUENCING... 50 0.28 1
(AC171127) Helobdella robusta clone CH306-1A1, WORKING DRAFT... 50 0.28 1
(ET538936) fcg3x.227550e06 C. graminicola genomic sequence G... 50 0.28 1
(ET532726) fcg3x.224750n15.f C. graminicola genomic sequence... 50 0.28 1
(ET520840) fcg3x.220250d22 C. graminicola genomic sequence G... 50 0.28 1
(ER328823) 1092344238684 Global-Ocean-Sampling_GS-34-01-01-1... 50 0.28 1
(ER176287) 1095522223066 Global-Ocean-Sampling_GS-33-01-01-1... 50 0.28 1
(EK152293) 1095456057589 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.28 1
(EJ591728) 1092961054501 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.28 1
(EJ524757) 1092955175668 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.28 1
(EJ311278) 1095403002086 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.28 1
(DH507429) Monosiga ovata DNA, fosmid clone: MOF-079M16, gen... 50 0.28 1
(DH491548) Monosiga ovata DNA, fosmid clone: MOF-052F24, gen... 50 0.28 1
(DH480863) Monosiga ovata DNA, fosmid clone: MOF-033P21, gen... 50 0.28 1
(DH480315) Monosiga ovata DNA, fosmid clone: MOF-033A12, gen... 50 0.28 1
(DH475361) Monosiga ovata DNA, fosmid clone: MOF-024E21, gen... 50 0.28 1
(DH466039) Monosiga ovata DNA, fosmid clone: MOF-007N08, gen... 50 0.28 1
(DH464233) Monosiga ovata DNA, fosmid clone: MOF-004L21, gen... 50 0.28 1
(DE843016) Macropus eugenii DNA, BAC clone: MEB1-003F15_R, 3... 50 0.28 1
(BZ124744) CH230-265B2.TJ CHORI-230 Segment 2 Rattus norvegi... 50 0.28 1
(EL569339) Physarum04539 Physarum polycephalum starvation st... 50 0.28 1
(EC715146) MCE00003459 Malawimonas californiana Company (LAR... 50 0.28 1
(CF442341) EST678686 normalized cDNA library of onion Allium... 50 0.28 1
(BY706450) Mus musculus adult male testis cDNA, RIKEN full-l... 50 0.28 1
(FC854656) CBHN8612.fwd CBHN Metridium senile tentacle Metri... 50 0.28 1
(EY335174) CAWY6845.fwd CAWY Helobdella robusta Subtracted E... 50 0.28 1
(EY326792) CAWY11834.fwd CAWY Helobdella robusta Subtracted ... 50 0.28 1
(BU834520) T062C08 Populus apical shoot cDNA library Populus... 46 0.28 2
(AY484461) Dictyostelium discoideum kinesin family member 6 ... 36 0.28 4
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 36 0.29 19
(CB393739) OSTR125E4_1 AD-wrmcDNA Caenorhabditis elegans cDN... 38 0.30 2
(BJ102529) Caenorhabditis elegans cDNA clone:yk1039f04 : 5' ... 38 0.30 2
(AX344572) Sequence 23 from Patent WO0200932. 34 0.31 12
(DN499480) T062C08.5pR Populus shoot meristem cDNA library P... 46 0.31 2
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 38 0.33 23
(BJ111418) Caenorhabditis elegans cDNA clone:yk1143a03 : 5' ... 38 0.33 2
(EY375338) CAXA15573.fwd CAXA Helobdella robusta Subtracted ... 36 0.34 3
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 38 0.34 22
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 38 0.35 21
(AP003640) Mus musculus genomic DNA, chromosome 16q clone:RP... 44 0.36 7
(AF245277) Dictyostelium discoideum kinesin Unc104/KIF1a hom... 42 0.36 3
(EH236692) JGI_ACAC19792.rev ACAC Phakopsora pachyrhizi TW72... 48 0.40 2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 0.40 22
(CR788306) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 0.40 6
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 0.41 14
(AE015450) Mycoplasma gallisepticum strain R complete genome. 36 0.42 22
(AU038072) Dictyostelium discoideum slug cDNA, clone SSH233. 32 0.43 4
(ED714184) GM_WBb0062M12.r GM_WBb Glycine max genomic clone ... 46 0.43 2
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 0.46 12
(EU515144) Epichloe festucae strain Fl1 serine/threonine pro... 40 0.46 3
(AC146275) Pan troglodytes BAC clone RP43-30A5 from chromoso... 42 0.47 6
(EJ561780) 1092959662149 Global-Ocean-Sampling_GS-29-01-01-1... 42 0.47 2
(EJ041593) 1095454096584 Global-Ocean-Sampling_GS-26-01-01-1... 42 0.50 2
(CR382124) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 34 0.52 2
(AX026122) Sequence 2 from Patent WO0032785. 40 0.57 4
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 0.59 12
(CR388028) Zebrafish DNA sequence from clone DKEYP-36B12 in ... 34 0.59 2
(AC180436) Strongylocentrotus purpuratus clone R3-3103M16, W... 42 0.61 4
(AC224236) Bos taurus clone CH240-446E22, WORKING DRAFT SEQU... 40 0.61 6
(AF205407) Neurospora crassa QDE3 protein (qde-3) gene, comp... 40 0.62 4
(AB257227) Exorista sorbillans mitochondrial gene for 16S rR... 32 0.62 4
(CT027648) Zebrafish DNA sequence from clone CH211-210F3 in ... 34 0.63 2
(AL954832) Zebrafish DNA sequence from clone DKEY-15O4. 46 0.65 8
(AC181500) Strongylocentrotus purpuratus clone R3-57N16, WOR... 32 0.66 10
(BJ441521) Dictyostelium discoideum cDNA clone:ddv46p19, 3' ... 32 0.67 4
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 38 0.67 21
(AC024854) Caenorhabditis elegans clone Y71F9B, complete seq... 34 0.68 6
(AC024201) Caenorhabditis elegans cosmid Y71F9B, complete se... 34 0.68 6
(CP000013) Borrelia garinii PBi, complete genome. 34 0.69 22
(AC168348) Strongylocentrotus purpuratus clone R3-56O12, WOR... 42 0.72 12
(CJ384185) Molgula tectiformis cDNA, gastrula/neurula clone:... 36 0.77 2
(FG071942) UI-FF-IF0-aaj-o-06-0-UI.r1 Ceratitis capitata emb... 34 0.78 2
(EF568108) Glossina pallidipes salivary gland hypertrophy vi... 32 0.78 14
(AC220351) Bos taurus clone CH240-361E8, WORKING DRAFT SEQUE... 40 0.79 8
(EV836344) TTSAG03TH Tetrahymena thermophila SB210 cDNA libr... 42 0.83 2
(U81000) Dictyostelium discoideum unknown protein mRNA, prom... 44 0.87 3
(AX026121) Sequence 1 from Patent WO0032785. 40 0.87 4
(FB571381) Sequence 248 from Patent EP1865317. 40 0.87 11
(BJ340191) Dictyostelium discoideum cDNA clone:dda12d06, 3' ... 46 0.92 2
(BU793971) SJF2BVF09 SJF Schistosoma japonicum cDNA, mRNA se... 30 0.94 4
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 30 0.98 12
(BJ365827) Dictyostelium discoideum cDNA clone:ddc36a22, 5' ... 38 0.99 2
(CT023106) KBrH134F15 genomic clone, KBrH (HindIII) BAC libr... 38 1.00 2
(BX537338) Zebrafish DNA sequence from clone DKEY-258E8 in l... 46 1.00 10
(CP000048) Borrelia hermsii DAH, complete genome. 36 1.00 23
(EV833630) TTSAI57TH Tetrahymena thermophila SB210 cDNA libr... 42 1.0 2
(AC162670) Bos taurus clone CH240-115N6, WORKING DRAFT SEQUE... 40 1.1 8
(BV548094) sok91c01.g1 Clint Pan troglodytes verus STS genom... 48 1.1 1
(BV542986) spf75b07.b1 Clint Pan troglodytes verus STS genom... 48 1.1 1
(BV524706) G591P604757FB3.T0 Clint Pan troglodytes verus STS... 48 1.1 1
(BV016833) S212P6821FF10.T0 CZECHII/Ei Mus musculus STS geno... 48 1.1 1
(AC161248) Mus musculus BAC clone RP24-530L5 from chromosome... 48 1.1 1
(AC147160) Mus musculus BAC clone RP24-336A22 from chromosom... 48 1.1 1
(AC131765) Mus musculus BAC clone RP24-240I9 from chromosome... 48 1.1 1
(AC103632) Mus musculus chromosome 1, clone RP24-555D5, comp... 48 1.1 1
(AC084382) Mus musculus BAC clone RP23-5K17 from 15, complet... 48 1.1 1
(BS000038) Pan troglodytes chromosome 22 clone:PTB-005J02, m... 48 1.1 1
(CR382128) Yarrowia lipolytica strain CLIB122 chromosome B c... 48 1.1 1
(CR380953) Candida glabrata strain CBS138 chromosome G compl... 48 1.1 1
(EF362470) Brugia malayi ecdysone receptor isoform C (EcR) m... 48 1.1 1
(EF362469) Brugia malayi ecdysone receptor isoform A (EcR) m... 48 1.1 1
(AF052301) Drosophila heteroneura lethal(1)discs large-1 tum... 48 1.1 1
(AP003119) Homo sapiens genomic DNA, chromosome 11q clone:RP... 48 1.1 1
(AP001671) Homo sapiens genomic DNA, chromosome 21q, section... 48 1.1 1
(AP000404) Homo sapiens genomic DNA, chromosome 21q21.1-q21.... 48 1.1 1
(AL356754) Human DNA sequence from clone RP11-11C5 on chromo... 48 1.1 1
(AC142439) Rattus norvegicus clone CH230-106B21, WORKING DRA... 48 1.1 1
(AC141952) Rattus norvegicus clone CH230-398F7, WORKING DRAF... 48 1.1 1
(AC141330) Rattus norvegicus clone CH230-281F14, WORKING DRA... 48 1.1 1
(AC136556) Rattus norvegicus clone CH230-253P17, WORKING DRA... 48 1.1 1
(AC134376) Rattus norvegicus clone CH230-345M16, *** SEQUENC... 48 1.1 1
(AC132738) Rattus norvegicus clone CH230-354G18, WORKING DRA... 48 1.1 1
(AC132036) Rattus norvegicus clone CH230-210J5, WORKING DRAF... 48 1.1 1
(AC129169) Rattus norvegicus clone CH230-8N4, WORKING DRAFT ... 48 1.1 1
(AC124848) Homo sapiens chromosome 5 clone CTC-492N21, WORKI... 48 1.1 1
(AC122614) Rattus norvegicus clone CH230-61F17, *** SEQUENCI... 48 1.1 1
(AC111217) Rattus norvegicus clone CH230-62D9, WORKING DRAFT... 48 1.1 1
(AC109524) Rattus norvegicus clone CH230-7F10, WORKING DRAFT... 48 1.1 1
(AC105622) Rattus norvegicus clone CH230-114F14, WORKING DRA... 48 1.1 1
(AC099233) Rattus norvegicus clone CH230-201I8, WORKING DRAF... 48 1.1 1
(AC094602) Rattus norvegicus clone CH230-3J23, WORKING DRAFT... 48 1.1 1
(CT005259) Leishmania major chromosome 20 strain Friedlin, c... 48 1.1 1
(AC226880) Monodelphis domestica clone VMRC18-966K5, WORKING... 48 1.1 1
(AC226866) Monodelphis domestica clone VMRC18-114O7, WORKING... 48 1.1 1
(AC202083) Zea mays chromosome 7 clone CH201-276O10; ZMMBBc0... 48 1.1 1
(AC181501) Strongylocentrotus purpuratus clone R3-1111D3, WO... 48 1.1 1
(AC180874) Strongylocentrotus purpuratus clone R3-3067M10, W... 48 1.1 1
(AC179467) Strongylocentrotus purpuratus clone R3-63K14, WOR... 48 1.1 1
(AC179464) Strongylocentrotus purpuratus clone R3-1036P9, WO... 48 1.1 1
(AC176593) Strongylocentrotus purpuratus clone R3-3077N22, W... 48 1.1 1
(AC024602) Homo sapiens chromosome 11 clone RP11-319P10, WOR... 48 1.1 1
(AC024411) Homo sapiens chromosome 21 clone RP11-383H8 map 2... 48 1.1 1
(AC013691) Homo sapiens clone RP11-21L23, WORKING DRAFT SEQU... 48 1.1 1
(AC013665) Homo sapiens clone RP11-20E22, WORKING DRAFT SEQU... 48 1.1 1
(ET608961) fcg3x.609550i05.f C. graminicola genomic sequence... 48 1.1 1
(ET585608) fcg3x.230450b02.f C. graminicola genomic sequence... 48 1.1 1
(ET566597) fcg3x.234450d12 C. graminicola genomic sequence G... 48 1.1 1
(ET556329) fcg3x.232050d21 C. graminicola genomic sequence G... 48 1.1 1
(ET554417) fcg3x.609450e06 C. graminicola genomic sequence G... 48 1.1 1
(ET489625) fcg2x.pk440.b12.f C. graminicola genomic sequence... 48 1.1 1
(CZ287277) cp51f05.f Candida parapsilosis Random Genomic Lib... 48 1.1 1
(CZ285029) cp39a03.r Candida parapsilosis Random Genomic Lib... 48 1.1 1
(CZ278856) cp02d09.r Candida parapsilosis Random Genomic Lib... 48 1.1 1
(CC436917) PUEIP91TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 48 1.1 1
(BX970516) Forward strand read from insert in 5'HPRT inserti... 48 1.1 1
(EC368804) G840P313FG22.T0 Oscarella carmela pSport1 Library... 48 1.1 1
(EB626933) AGENCOURT_54975752 D. mojavensis EST Drosophila m... 48 1.1 1
(EB615311) AGENCOURT_54969559 D. mojavensis EST Drosophila m... 48 1.1 1
(EB183117) AHAH-aaa15h03.g1 Pristionchus_pacificus_L4_pDNR_L... 48 1.1 1
(EB053392) StheSEQ12473 Sporotrichum thermophile pBluescript... 48 1.1 1
(DW212558) EST28822 Larval Stage 1 Aedes aegypti cDNA clone ... 48 1.1 1
(DV385468) NADC701TR Aedes aegypti infected with Dengue viru... 48 1.1 1
(DV370537) NACMT96TF Aedes aegypti infected with Plasmodium ... 48 1.1 1
(DV359115) NABZF53TF Aedes aegypti infected with Plasmodium ... 48 1.1 1
(DV353395) NABX619TF Aedes aegypti infected with Plasmodium ... 48 1.1 1
(DR025833) Osmo00017 F. cylindrus osmotic stress library Fra... 48 1.1 1
(CV303527) CS_hyp_29e12_M13Reverse Blue crab hypodermis, nor... 48 1.1 1
(CV303209) CS_hyp_26c04_M13Reverse Blue crab hypodermis, nor... 48 1.1 1
(CV071224) CS_gil_39F04_M13Reverse Blue crab gill, normalize... 48 1.1 1
(CU656212) Quercus robur root EST, clone SSH1PL3E02. 48 1.1 1
(CO792970) NT016C_B04 St18-22 Neural tube (NT) Ambystoma mex... 48 1.1 1
(CD311630) StrPu691.004994 Sea urchin larva cDNA library MPM... 48 1.1 1
(CD310967) StrPu691.004331 Sea urchin larva cDNA library MPM... 48 1.1 1
(FE824648) CCAG38481.g1 CCAG Petrolisthes cinctipes heart, g... 48 1.1 1
(FE747721) CAYC4507.g1 CAYC Petrolisthes cinctipes heart, ne... 48 1.1 1
(FD557274) RR4EU68TF RR4(PB) Raphanus raphanistrum subsp. la... 48 1.1 1
(EX858005) CBNF4277.fwd CBNF Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX858004) CBNF4277.rev CBNF Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX857732) CBNF4140.fwd CBNF Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX857731) CBNF4140.rev CBNF Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX855864) CBNF3134.fwd CBNF Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX855863) CBNF3134.rev CBNF Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX839009) CBNB7748.fwd CBNB Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX839008) CBNB7748.rev CBNB Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX837889) CBNB7152.fwd CBNB Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX837888) CBNB7152.rev CBNB Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX835649) CBNB5974.fwd CBNB Phycomyces blakesleeanus NRRL15... 48 1.1 1
(EX835648) CBNB5974.rev CBNB Phycomyces blakesleeanus NRRL15... 48 1.1 1
(BJ440883) Dictyostelium discoideum cDNA clone:ddv45d01, 3' ... 42 1.1 2
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 36 1.1 21
(BT013427) Lycopersicon esculentum clone 132067F, mRNA seque... 46 1.2 2
(Z72503) Caenorhabditis elegans Cosmid C26C6. 38 1.2 5
(AL929334) Zebrafish DNA sequence from clone DKEY-24F15. 42 1.2 7
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 38 1.2 12
(AC223312) Bos taurus clone CH240-423D19, WORKING DRAFT SEQU... 40 1.2 5
(AY691416) Australicoccus grevilleae cytochrome b (cytb) gen... 38 1.2 4
(BJ405844) Dictyostelium discoideum cDNA clone:dds33p04, 3' ... 42 1.3 2
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 32 1.3 12
(BJ343813) Dictyostelium discoideum cDNA clone:dda17d08, 3' ... 46 1.3 2
(EJ742035) 1092962025270 Global-Ocean-Sampling_GS-30-02-01-1... 44 1.3 2
(AC174511) Strongylocentrotus purpuratus clone R3-18J20, WOR... 32 1.4 11
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 1.4 11
(BJ409435) Dictyostelium discoideum cDNA clone:dds41a20, 3' ... 42 1.4 2
(EJ745771) 1092962059533 Global-Ocean-Sampling_GS-30-02-01-1... 36 1.4 3
(EB606583) AGENCOURT_56959018 D. grimshawi EST Drosophila gr... 44 1.4 2
(EB611244) AGENCOURT_57298399 D. grimshawi EST Drosophila gr... 46 1.4 2
(EV836607) TTSAI35TH Tetrahymena thermophila SB210 cDNA libr... 42 1.4 2
(EV836503) TTSAH59TH Tetrahymena thermophila SB210 cDNA libr... 42 1.4 2
(EB629907) AGENCOURT_56962534 D. grimshawi EST Drosophila gr... 44 1.4 2
(AC141946) Rattus norvegicus clone CH230-386N17, *** SEQUENC... 42 1.5 3
(EV827026) TTSA266TH Tetrahymena thermophila SB210 cDNA libr... 42 1.5 2
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 32 1.5 14
(AY232270) Dictyostelium discoideum putative protein Roco8 (... 38 1.6 4
(GH009097) G1220P139FJ12.T0 Neurospora crassa cDNA - 1 hour ... 38 1.6 2
(AF277458) Arabidopsis thaliana LEUNIG (LEUNIG) mRNA, comple... 44 1.6 2
(CR931779) Zebrafish DNA sequence from clone DKEY-251J8 in l... 44 1.6 5
(EJ132020) 1092343565998 Global-Ocean-Sampling_GS-27-01-01-1... 40 1.6 3
(EB613238) AGENCOURT_56918422 D. grimshawi EST Drosophila gr... 44 1.6 2
(AC209116) Chlorocebus aethiops clone CH252-383J20, WORKING ... 34 1.6 7
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 1.7 15
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 40 1.7 8
(EJ038798) 1095454083371 Global-Ocean-Sampling_GS-26-01-01-1... 38 1.7 2
(AB211596) Dictyostelium discoideum DrbA gene for retinoblas... 40 1.7 3
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 1.8 22
(AL401681) T7 end of clone AS0AA029D03 of library AS0AA from... 42 1.8 2
(AC172503) Bos taurus clone CH240-185H4, WORKING DRAFT SEQUE... 42 1.8 6
(CR450826) Zebrafish DNA sequence from clone CH211-145J10 in... 36 1.9 5
(AC169940) Bos taurus clone CH240-237N23, WORKING DRAFT SEQU... 42 1.9 4
(AC111966) Rattus norvegicus clone CH230-185O4, *** SEQUENCI... 42 1.9 5
(EV834150) TTSAE37TH Tetrahymena thermophila SB210 cDNA libr... 42 1.9 2
(DY887691) CeleSEQ4280 Cunninghamella elegans pBluescript (E... 32 2.1 4
(AC217525) Solanum lycopersicum chromosome 7 clone C07HBa006... 42 2.1 5
(AC127719) Rattus norvegicus clone CH230-113C15, WORKING DRA... 34 2.1 2
(AC094741) Rattus norvegicus clone CH230-5C12, *** SEQUENCIN... 34 2.1 2
(AC094894) Rattus norvegicus clone CH230-6B12, WORKING DRAFT... 34 2.1 2
(AC128413) Rattus norvegicus clone CH230-164B4, *** SEQUENCI... 34 2.1 2
(AC134134) Rattus norvegicus clone CH230-175I17, *** SEQUENC... 34 2.1 2
(AC174619) Colobus guereza clone CH272-105H5, WORKING DRAFT ... 38 2.2 8
(AC158539) Pan troglodytes BAC clone CH251-510O3 from chromo... 36 2.2 2
(AP009926) Lotus japonicus genomic DNA, clone: LjT04M14, TM2... 38 2.2 8
(AX926716) Sequence 6 from Patent WO03084989. 36 2.2 12
(EB287163) CNSN01-F-007995-501 Normalized CNS library (juven... 44 2.2 2
(EV849165) FTSAO01TF Tetrahymena thermophila SB210 cDNA libr... 42 2.2 2
(EV834352) TTSAF36TH Tetrahymena thermophila SB210 cDNA libr... 42 2.3 2
(EA374851) Sequence 87 from patent US 7314971. 34 2.3 12
(AR898678) Sequence 87 from patent US 7071375. 34 2.3 12
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 38 2.4 21
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 38 2.4 21
(AX345665) Sequence 736 from Patent WO0200928. 42 2.4 2
(AY217738) Eimeria tenella apicoplast, complete genome. 32 2.4 8
(AC168334) Strongylocentrotus purpuratus clone R3-58O22, WOR... 36 2.5 7
(AC196751) Citrus sinensis clone CSRBBa-018K20, WORKING DRAF... 34 2.5 8
(CR376772) Zebrafish DNA sequence from clone CH211-244C20 in... 36 2.6 7
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 34 2.6 11
(CU914165) Zebrafish DNA sequence from clone CH211-58M3 in l... 40 2.6 6
(AC026080) Homo sapiens chromosome 3 clone RP11-368I23, WORK... 34 2.6 7
(AC020297) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 42 2.6 3
(M62992) R.rattus glycoprotein p62 gene, complete cds. 34 2.7 2
(DD316336) Primary Rat Hepatocyte Toxicity Modeling. 34 2.7 2
(DD269621) Molecular Hepatotoxicology Modeling. 34 2.7 2
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 2.7 12
(X52583) Rat mRNA for nuclear pore glycoprotein P62. 34 2.7 2
(DD317735) Primary Rat Hepatocyte Toxicity Modeling. 34 2.7 2
(BC128709) Rattus norvegicus nucleoporin 62, mRNA (cDNA clon... 34 2.7 2
(AC144658) Medicago truncatula clone mth2-31g20, complete se... 40 2.7 10
(AM438681) Vitis vinifera contig VV79X001197.1, whole genome... 36 2.8 2
(EJ548039) 1092959418010 Global-Ocean-Sampling_GS-29-01-01-1... 36 2.8 2
(DT563013) EST1073653 GH_TMO Gossypium hirsutum cDNA, mRNA s... 36 2.8 2
(EJ234295) 1092404083185 Global-Ocean-Sampling_GS-27-01-01-1... 36 2.8 2
(EJ660904) 1092955023027 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.8 2
(EJ762389) 1092963146070 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.9 2
(ER382864) 1094338858707 Global-Ocean-Sampling_GS-34-01-01-1... 36 2.9 2
(EJ647627) 1092351919251 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.9 2
(EJ751585) 1092963039877 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.9 2
(ER609220) 1093016297345 Global-Ocean-Sampling_GS-36-01-01-2... 32 2.9 2
(EK335838) 1095467041620 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.9 2
(CO399914) AGENCOURT_27527000 NIH_MGC_254 Rattus norvegicus ... 34 2.9 2
(CK595497) AGENCOURT_17893341 NIH_MGC_237 Rattus norvegicus ... 34 2.9 2
(CV078519) AGENCOURT_31478823 NIH_MGC_251 Rattus norvegicus ... 34 2.9 2
(CK598930) AGENCOURT_17839421 NIH_MGC_238 Rattus norvegicus ... 34 2.9 2
(EK401944) 1095469543290 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.9 2
(EJ552833) 1092959468698 Global-Ocean-Sampling_GS-29-01-01-1... 36 2.9 2
(CV105653) AGENCOURT_31520983 NIH_MGC_238 Rattus norvegicus ... 34 2.9 2
(DR544168) WS01043.B21_J06 SS-R-N-A-11 Picea sitchensis cDNA... 36 2.9 2
(CV078517) AGENCOURT_31474668 NIH_MGC_251 Rattus norvegicus ... 34 2.9 2
(CB712895) AMGNNUC:NRHY4-00127-F12-A W Rat hypothalamus (104... 34 2.9 2
(CP000576) Prochlorococcus marinus str. MIT 9301, complete g... 36 2.9 20
(AB010426) Phytoplasma sp. gene for AL1 like protein, comple... 36 3.0 4
(EH013072) USDA-FP_185908 Lysiphlebus testaceipes adult whol... 30 3.1 4
(AC067788) Homo sapiens chromosome 4 clone RP11-168M20 map 4... 40 3.1 8
(AM464492) Vitis vinifera, whole genome shotgun sequence, co... 32 3.3 6
(EX857815) CBNF4181.fwd CBNF Phycomyces blakesleeanus NRRL15... 40 3.3 2
(EX857814) CBNF4181.rev CBNF Phycomyces blakesleeanus NRRL15... 40 3.3 2
(DH380616) Oryzias latipes Fosmid clone:GOLWFno781_a12, forw... 40 3.3 2
(EV845269) TTSB653TH Tetrahymena thermophila SB210 cDNA libr... 42 3.4 2
(ER348756) 1092345434560 Global-Ocean-Sampling_GS-34-01-01-1... 36 3.4 3
(EV834252) TTSAE55TH Tetrahymena thermophila SB210 cDNA libr... 42 3.4 2
(AC176555) Strongylocentrotus purpuratus clone R3-3076G4, WO... 42 3.5 10
(AJ776176) Populus euphratica EST, clone P0000400010B01F1. 44 3.5 2
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ... 44 3.5 6
(AC167785) Glycine max clone gmw2-2o24, WORKING DRAFT SEQUEN... 34 3.6 9
(CR931788) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 3.6 8
(EV845463) TTSB320TH Tetrahymena thermophila SB210 cDNA libr... 42 3.6 2
(AB102778) Dictyostelium discoideum kin5 mRNA for kinesin-re... 38 3.6 3
(CR848027) Zebrafish DNA sequence from clone DKEY-20I22 in l... 38 3.6 6
(BE577074) L0-1784T3 Ice plant Lambda Uni-Zap XR expression ... 42 3.6 2
(EV827107) TTSA363TH Tetrahymena thermophila SB210 cDNA libr... 42 3.7 2
(EJ096225) 1095462101146 Global-Ocean-Sampling_GS-26-01-01-1... 34 3.7 3
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com... 38 3.8 22
(AF291051) Carsonella ruddii cell division protein (gidA) ge... 34 3.8 5
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 32 3.8 14
(EV833591) TTSAH62TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(EV835355) TTSB418TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(EV834616) TTSAK10TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(EV835738) TTSB188TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(EV835719) TTSB192TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 36 3.8 8
(EV826943) TTSA219TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(EV833805) TTSAJ94TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(EV836337) TTSAG92TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(EV826923) TTSA268TH Tetrahymena thermophila SB210 cDNA libr... 42 3.8 2
(AF527409) Cydia pomonella haplotype A22 12S ribosomal RNA a... 36 3.9 2
(AF527408) Cydia pomonella haplotype A21 12S ribosomal RNA a... 36 3.9 2
(EV826541) TTSA128TH Tetrahymena thermophila SB210 cDNA libr... 42 3.9 2
(AF527401) Cydia pomonella haplotype A14 12S ribosomal RNA a... 36 3.9 2
(AC173609) Bos taurus clone CH240-199N18, WORKING DRAFT SEQU... 38 3.9 5
(AF527402) Cydia pomonella haplotype A15 12S ribosomal RNA a... 36 3.9 2
(AC022342) Drosophila melanogaster clone BACR33N21, complete... 38 3.9 9
(AF527407) Cydia pomonella haplotype A20 12S ribosomal RNA a... 36 3.9 2
(EV834716) TTSAL34TH Tetrahymena thermophila SB210 cDNA libr... 42 3.9 2
(AC116921) Dictyostelium discoideum chromosome 2 map 4624505... 38 3.9 4
(AF527406) Cydia pomonella haplotype A19 12S ribosomal RNA a... 36 4.0 2
(AF527403) Cydia pomonella haplotype A16 12S ribosomal RNA a... 36 4.0 2
(AC192054) Rhinolophus ferrumequinum clone VMRC7-150F4, WORK... 40 4.0 7
(EV835173) TTSB063TH Tetrahymena thermophila SB210 cDNA libr... 42 4.0 2
(EV833620) TTSAI91TH Tetrahymena thermophila SB210 cDNA libr... 42 4.0 2
(AF527405) Cydia pomonella haplotype A18 12S ribosomal RNA a... 36 4.0 2
(EV845440) TTSB356TH Tetrahymena thermophila SB210 cDNA libr... 42 4.0 2
(AC108096) Homo sapiens chromosome 5 clone RP11-107O20, comp... 38 4.0 8
(BX901977) Zebrafish DNA sequence from clone DKEY-1H1 in lin... 32 4.1 8
(EV845701) TTSAX95TH Tetrahymena thermophila SB210 cDNA libr... 42 4.1 2
(EV827279) TTSA357TH Tetrahymena thermophila SB210 cDNA libr... 42 4.1 2
(EV833808) TTSAJ07TH Tetrahymena thermophila SB210 cDNA libr... 42 4.1 2
(EV827304) TTSA373TH Tetrahymena thermophila SB210 cDNA libr... 42 4.1 2
(BJ368172) Dictyostelium discoideum cDNA clone:ddc45g18, 5' ... 42 4.1 2
(EV833632) TTSAI80TH Tetrahymena thermophila SB210 cDNA libr... 42 4.1 2
(AW266797) L48-136T3 Ice plant Lambda Uni-Zap XR expression ... 42 4.1 2
(EV844953) TTSB159TH Tetrahymena thermophila SB210 cDNA libr... 42 4.2 2
(AU037277) Dictyostelium discoideum slug cDNA, clone SSB704. 44 4.2 2
(AC154273) Mus musculus BAC clone RP24-293F24 from chromosom... 36 4.2 6
(EJ122079) 1092343377392 Global-Ocean-Sampling_GS-27-01-01-1... 36 4.2 2
(EV837716) TTSA582TH Tetrahymena thermophila SB210 cDNA libr... 42 4.2 2
(DQ780895) Oncorhynchus tshawytscha CLOCK1b (Clock1b) mRNA, ... 46 4.3 1
(DQ780894) Oncorhynchus tshawytscha CLOCK1b (Clock1b) gene, ... 46 4.3 1
(DQ121034) Hucho taimen clone ZA-30 microsatellite sequence. 46 4.3 1
(CR352231) Zebrafish DNA sequence from clone CH211-216G8 in ... 46 4.3 1
(BX649467) Zebrafish DNA sequence from clone CH211-117L16 in... 46 4.3 1
(BX511093) Zebrafish DNA sequence from clone CH211-194C21 in... 46 4.3 1
(BX323008) Zebrafish DNA sequence from clone DKEY-29D16 in l... 46 4.3 1
(X66602) M.musculus brain-2 mRNA containing POU domain. 46 4.3 1
(M88300) Mouse brain-2 POU-domain protein, complete cds. 46 4.3 1
(AL772230) Mouse DNA sequence from clone RP23-381K3 on chrom... 46 4.3 1
(AL603706) Mouse DNA sequence from clone RP23-407I21 on chro... 46 4.3 1
(AL512597) Mouse DNA sequence from clone RP23-132G2 on chrom... 46 4.3 1
(AC165408) Mus musculus chromosome 18, clone wi1-2909J7, com... 46 4.3 1
(AC164313) Mus musculus BAC clone RP23-24F12 from chromosome... 46 4.3 1
(AC157548) Mus musculus chromosome 18, clone RP24-310H1, com... 46 4.3 1
(AC141561) Mus musculus BAC clone RP23-457C15 from chromosom... 46 4.3 1
(AC138595) Mus musculus chromosome 1, clone RP24-286D13, com... 46 4.3 1
(AC123946) Mus musculus BAC clone RP23-97L17 from chromosome... 46 4.3 1
(AC123051) Mus musculus BAC clone RP24-366E4 from chromosome... 46 4.3 1
(AC122253) Mus musculus BAC clone RP23-171K3 from chromosome... 46 4.3 1
(AC121546) Mus musculus chromosome 6, clone RP24-537N12, com... 46 4.3 1
(AC102611) Mus musculus chromosome 1, clone RP23-416O18, com... 46 4.3 1
(AC099600) Mus musculus chromosome 15, clone RP23-236P20, co... 46 4.3 1
(AC027655) Mus musculus strain C57BL6/J chromosome 6 clone R... 46 4.3 1
(CT989257) CH251-543D24, complete sequence. 46 4.3 1
(AC207009) Pongo abelii BAC clone CH276-421E1 from chromosom... 46 4.3 1
(EU124740) Solanum lycopersicum chromosome 3 clone C03HBa029... 46 4.3 1
(CU468249) S.lycopersicum DNA sequence from clone LE_HBa-94K... 46 4.3 1
(CR382131) Yarrowia lipolytica strain CLIB122 chromosome E c... 46 4.3 1
(BX284747) Neurospora crassa DNA linkage group II BAC clone ... 46 4.3 1
(AP006495) Cyanidioschyzon merolae DNA, chromosome 13, compl... 46 4.3 1
(AP006372) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 4.3 1
(AC149131) Medicago truncatula chromosome 7 clone mth2-19e15... 46 4.3 1
(DL005655) NUCLEIC ACID PROBES AND NUCLEIC ACID ANALOG PROBES. 46 4.3 1
(CS459580) Sequence 61 from Patent WO2006117596. 46 4.3 1
(CQ870130) Sequence 551 from Patent WO2004074320. 46 4.3 1
(CQ577952) Sequence 5710 from Patent WO0171042. 46 4.3 1
(CR848714) Wallaby DNA sequence from clone MEKBa-460J13. 46 4.3 1
(Y17299) Drosophila melanogaster b6 gene. 46 4.3 1
(EU340382) Mayetiola destructor clone Hf-14 microsatellite s... 46 4.3 1

>(BJ345474) Dictyostelium discoideum cDNA clone:dda23f19, 3' end,
single read.
Length = 624

Score = 559 bits (282), Expect(2) = 0.0
Identities = 285/285 (100%)
Strand = Plus / Minus


Query: 1407 gaagagtatcacaatcatcaaaacattgtgctgatataatgacagcatcatcatatgatc 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gaagagtatcacaatcatcaaaacattgtgctgatataatgacagcatcatcatatgatc 226


Query: 1467 tatttacatttataaaggaaaagtttttacaatgtaatgataatcaaatcttaatggaat 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tatttacatttataaaggaaaagtttttacaatgtaatgataatcaaatcttaatggaat 166


Query: 1527 atattaaattatttagaatttggttcatttatcgtattgaagtaccatcattcttttcag 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atattaaattatttagaatttggttcatttatcgtattgaagtaccatcattcttttcag 106


Query: 1587 agattttaccaactttaaatcgttatgttttagaatttacnaaattttaaatgtgaagct 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 agattttaccaactttaaatcgttatgttttagaatttacnaaattttaaatgtgaagct 46


Query: 1647 tatcatttatcaatacaaaaccattttcatcagagaacaacaaga 1691
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tatcatttatcaatacaaaaccattttcatcagagaacaacaaga 1

Score = 547 bits (276), Expect(2) = 0.0
Identities = 276/276 (100%)
Strand = Plus / Minus


Query: 1068 agctaaatcatcagatactttatcaatggttacaagatccattctttaaatcattcttat 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agctaaatcatcagatactttatcaatggttacaagatccattctttaaatcattcttat 565


Query: 1128 caagattaaatttaattttagatattttcattcatttcactagacattcaaatcaaatca 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caagattaaatttaattttagatattttcattcatttcactagacattcaaatcaaatca 505


Query: 1188 ctgaagagatattcaatagtggtggtaataatacaactgatttaatatttaattcaatta 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgaagagatattcaatagtggtggtaataatacaactgatttaatatttaattcaatta 445


Query: 1248 aatattcattaacagatttagagctatcattacgttatttaattaatgaaaatagtagta 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatattcattaacagatttagagctatcattacgttatttaattaatgaaaatagtagta 385


Query: 1308 gtggtgctggtagtggtggtgctgatcaacagaatg 1343
||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtggtgctggtagtggtggtgctgatcaacagaatg 349

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,233,399,184
Number of extensions: 151646593
Number of successful extensions: 13747584
Number of sequences better than 10.0: 917
Length of query: 1691
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1667
Effective length of database: 96,409,374,237
Effective search space: 160714426853079
Effective search space used: 160714426853079
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15654-1 (Contig-U15654-1Q) /CSM_Contig/Contig-U15654-1Q.Seq.d
(1691 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q9BWH6) RecName: Full=RNA polymerase II-associated protein 1; ... 65 8e-09
AB037824_1(AB037824|pid:none) Homo sapiens mRNA for KIAA1403 pro... 65 8e-09
BC167356_1(BC167356|pid:none) Xenopus tropicalis hypothetical pr... 65 1e-08
BC077222_1(BC077222|pid:none) Xenopus laevis hypothetical protei... 64 1e-08
AK167589_1(AK167589|pid:none) Mus musculus 14 days pregnant adul... 64 2e-08
AK166232_1(AK166232|pid:none) Mus musculus mammary gland RCB-052... 64 2e-08
(Q91VM0) RecName: Full=RNA polymerase II-associated protein 1; ... 64 2e-08
AK161487_1(AK161487|pid:none) Mus musculus adult male testis cDN... 64 2e-08
BC117973_1(BC117973|pid:none) Mus musculus RNA polymerase II ass... 64 2e-08
(A0JN53) RecName: Full=RNA polymerase II-associated protein 1; ... 64 2e-08
AP007167_57(AP007167|pid:none) Aspergillus oryzae RIB40 genomic ... 59 5e-07
AM920435_804(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 57 2e-06
AM270253_10(AM270253|pid:none) Aspergillus niger contig An11c036... 57 3e-06
FM992692_92(FM992692|pid:none) Candida dubliniensis CD36 chromos... 56 5e-06
CR380954_63(CR380954|pid:none) Candida glabrata strain CBS138 ch... 55 8e-06
AE017346_155(AE017346|pid:none) Cryptococcus neoformans var. neo... 55 1e-05
(Q04418) RecName: Full=RNA polymerase II-associated protein RBA5... 55 1e-05
CU928170_30(CU928170|pid:none) Kluyveromyces thermotolerans stra... 54 1e-05
CU633865_127(CU633865|pid:none) Podospora anserina genomic DNA c... 54 2e-05
AX057341_1(AX057341|pid:none) Sequence 7 from Patent WO0075305. 54 2e-05
CR382123_35(CR382123|pid:none) Kluyveromyces lactis strain NRRL ... 52 7e-05
AM910988_175(AM910988|pid:none) Plasmodium knowlesi strain H chr... 50 3e-04
FN357314_6(FN357314|pid:none) Schistosoma mansoni genome sequenc... 50 3e-04
AM989980_22(AM989980|pid:none) Zygosaccharomyces rouxii strain C... 47 0.002
AE014185_317(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 46 0.005
AK117387_1(AK117387|pid:none) Arabidopsis thaliana At4g38440 mRN... 44 0.023
CR940353_256(CR940353|pid:none) Theileria annulata strain Ankara... 42 0.089
AP008212_1400(AP008212|pid:none) Oryza sativa (japonica cultivar... 38 0.98
(Q54R98) RecName: Full=Probable serine/threonine-protein kinase ... 36 4.9
CP001357_2525(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 35 6.4

>(Q9BWH6) RecName: Full=RNA polymerase II-associated protein 1;
&BC000246_1(BC000246|pid:none)
&EU832337_1(EU832337|pid:none)
&EU832422_1(EU832422|pid:none)
Length = 1393

Score = 65.1 bits (157), Expect = 8e-09
Identities = 37/132 (28%), Positives = 59/132 (44%)
Frame = +1

Query: 508 RFNFTGEIIQRGSSTPTSQGLHHHGSEAGEAGYTLNEIIMLIKSSNHSQKCIALKTLTFI 687
RF+ GE++ PT GLHHHG EA AGY+L E+ L +S Q+ +AL L +
Sbjct: 358 RFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQV 417

Query: 688 LQKVHNGSYGSFNKLQLIDEXXXXXXXXXXXXXXDSQVPSILISALTCIHALIVPTIKEN 867
+ + G +G ++ D +V ++ +A+ + AL+V E
Sbjct: 418 ISRAQAGEFGDRLAGSVLSLLLDAGFLFLLRFSLDDRVDGVIATAIRALRALLVAPGDEE 477

Query: 868 AYEMIESRSHRA 903
+ S H A
Sbjct: 478 LLDSTFSWYHGA 489

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,856,088,991
Number of extensions: 28862844
Number of successful extensions: 84809
Number of sequences better than 10.0: 30
Number of HSP's gapped: 84773
Number of HSP's successfully gapped: 30
Length of query: 563
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 429
Effective length of database: 617,481,958
Effective search space: 264899759982
Effective search space used: 264899759982
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.72 gvh: 0.39 alm: 0.26 top: 0.30 tms: 0.07 mit: 0.18 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.02 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: endoplasmic reticulum
20.0 %: mitochondrial
20.0 %: nuclear
20.0 %: cytoplasmic
8.0 %: plasma membrane
4.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U15654-1 is end

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0