Contig-U15647-1
Contig ID Contig-U15647-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15647-1 (Contig-U15647-1Q) /CSM_Contig/Contig-U15647-1Q.Seq.d
TTAACGACCACCTTTTACTAATCCCAACAATTCTTATAGATATTTAATAG
GTTAAAAAAAACAAACAAATTTGTATTATTAAATAAAATAAAAAAAAAAA
ACCCNTTTTAAAAAAAAAA----------ATAACCAATTCCCGTACATTG
ATGGTAGACGACACAATGAACGTATCGGACATTGTAAAGTATGTCTCTAC
ACAGGTGCCCATCTCAAGTGCAATCGATAGGGAGCAATACGACCAAATGA
ACATGTATGAGGTTGAGGAGTTGTCCAACGATATGACCGTCAGGGAGCAG
GGTTACGTTGGCGAATGCACCACCAATCTTTTACGTGGCGCCAAGGGTGA
TCTTGGCCTTTGCGTGCAAGTTCCTTATTTCGAGGGTTTCATCATGAGAA
AGAGGGGTGGTGGTTTGATCAAGGGTTTAAAGAATTGGAACAAACGTTGG
TACAGTCTTAGAAAGAATAAATTACTCTACTTTAAATCAAAATCCGATTC
AACAGAGATGGGTTGTATCTTGATGAAAACAGTTCAAACAGTTAGACCTT
GTACAGAGGTTGCCGATATACCATCGAAATATTCAAAGATGTGCTTTGAA
ATCGTTACACCCGCTAGAACATTTGTAATGTTGGCAAATAATGTTTCTGA
TATGAAGAAATGGGTAGAGATATTGGAATCATCTCGTAGAATGTTTGCTT
ATGAAACTCACTTTTTCGGTGTCGCCAGTAAAAAGATATCAGAAGGTGGT
GGTGGTTCATTCATCAATGATGACGATGACGATGCACGATGATGATGATG
AAAATAGTGAAAGAAAAGAACAAAAGAGAAGATTACAAGAACAAAAAATG
GAAAAAGAACGTCAAGAGAAAGAACGTATTCAAGCAGAAGAGAAAGCACG
TCAAGATGAAGTTGAACGTCAAGAACGTATTCGTATTGAACAAGAACAAG
CAGAACGTCAATTCATTGAACAAGAGTTGGCTCGTGCCGAGGAGGAACGT
AAAGAACGTATTCGTCAAGAGCAAGAGGAACAAGATCGTCAAGAACAAGA
GAGAAGAAGAATCGAAGAGGAGGAAATGGTTAAATTAATGATTGAAGAAG
AGGAGAGAAGAAGAAAACTCGAAGAAAAGAGACAAGAAGATCTTAGAAAG
ATTCAAGAGGAACAAGAATTACTCGTGAAACAACAACAAGAATTCATTGC
AAAACAACAACAACTCGAACTTGAAAAACAAAGACAACTTCAAGATCAAC
TCGAAGAAGATAGACGTTTGGAGGAATTAATGTTACAAATGGAAATGGAT
CAAGAAGAACGTATCAAAGTCAAAGAGGAACAAGAACGTCAAGAACAAGA
GAAACTCGAACTTGCAAAGAAAATGCAAGAAGAGGAAGAGAAATTAAAAG
AAGAACAAGAACGTATTCGTTTAGAACAAGAAAGAGTTGAAAAAGAACGT
CAAGAAGAAGAGAAACGTATGGAATTAGAACGTATCGAAGAGGAACGTCT
CGAAGCAATTCGTATTGAAAAAGTACGTATTGAAAAGGAGGAACGTGAAC
GTAAAAAAGAAGAGAAAGAAGAAAAAGAAAGAGAACAAAGAGAAAAAGAA
CAAAAGGATAAAGAAAGAGAAAAGAAATTAGCTGAATTTGAAAAGCAACA
AAAAGAGAAAAAACAACAACAACAGGTCGAAGAATTATCTTCAAAACCTG
ATGATGCTTCATCAACTTCAAAATCAAATATTGGTGCTGATGAGGATGGT
TTCTTATCTGAATATCAAAAGAAAAAGGAACAAGTTTTAAAGGGAAAGCA
ATCAAATTCAAATAATCGTTCATCTCCTTCCTCAAAGAAATTCACATCAT
CTTTATTTGATATTACAACATCAACTGATGACGATGATTTGTTCAATTAA
TAATAATAATAATAATTATACATATTTTTTTAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAATATATTCAAAAGAAAATCATTTAATT
AATAAAAAAAAAATCTTGTGTCATATAAAAA

Gap gap included
Contig length 2021
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 6279044
End point 6280995
Strand (PLUS/MINUS) PLUS
Number of clones 10
Number of EST 16
Link to clone list U15647
List of clone(s)

est1=CHO154F,1,119
est2=CFF105F,3,119
est3=AFK623F,11,119
est4=CHC250Z,120,784
est5=AFK623Z,520,1536
est6=CHQ296F,919,1394
est7=CFF105Z,1006,1582
est8=CHO154Z,1209,1622
est9=VSF690F,1308,1931
est10=VSF690Z,1308,1908
est11=VSK391Z,1536,1908
est12=VSK391F,1537,1931
est13=VSE341E,1609,1997
est14=VSF384F,1722,1998
est15=VSE784E,1727,2021
est16=VSF384Z,1732,1841
Translated Amino Acid sequence
ndhllliptilidi**vkknkqiciik*NKKKKPXLKKK---

---ITNSRTLMVDDTMNVSDIVKYVSTQVPISSAIDREQYDQMNMYEVEELSNDMTVREQ
GYVGECTTNLLRGAKGDLGLCVQVPYFEGFIMRKRGGGLIKGLKNWNKRWYSLRKNKLLY
FKSKSDSTEMGCILMKTVQTVRPCTEVADIPSKYSKMCFEIVTPARTFVMLANNVSDMKK
WVEILESSRRMFAYETHFFGVASKKISEGGGGSFINDDDDDAR****k**kkrtkekitr
tkngkrtsrertyssrrestsr*s*tsrtysy*trtsrtsih*trvgscrggt*rtyssr
argtrssrtrekknrrggng*ind*rrgekkktrrketrrs*kdsrgtritretttrihc
kttttrt*ktkttsrstrrr*tfgginvtngngsrrtyqsqrgtrtsrtretrtckenar
rgreikrrtrtysfrtrks*krtsrrretygirtyrrgtsrsnsy*ksty*kggt*t*kr
rerrkrkrtkrkrtkg*rkrkeis*i*katkrekttttgrriifkt**cfinfkikywc*
*gwfli*iskekgtsfkgkaikfk*sfisflkeihiifi*yynin**r*fvqliiiiiii
hiflkkkkkkkkkkkkkkyiqkkii*likkkscvi*k


Translated Amino Acid sequence (All Frames)
Frame A:
ltttfy*sqqfl*ifnrlkktnkfvllnkikkknpf*kk---

---ITNSRTLMVDDTMNVSDIVKYVSTQVPISSAIDREQYDQMNMYEVEELSNDMTVREQ
GYVGECTTNLLRGAKGDLGLCVQVPYFEGFIMRKRGGGLIKGLKNWNKRWYSLRKNKLLY
FKSKSDSTEMGCILMKTVQTVRPCTEVADIPSKYSKMCFEIVTPARTFVMLANNVSDMKK
WVEILESSRRMFAYETHFFGVASKKISEGGGGSFINDDDDDAR****k**kkrtkekitr
tkngkrtsrertyssrrestsr*s*tsrtysy*trtsrtsih*trvgscrggt*rtyssr
argtrssrtrekknrrggng*ind*rrgekkktrrketrrs*kdsrgtritretttrihc
kttttrt*ktkttsrstrrr*tfgginvtngngsrrtyqsqrgtrtsrtretrtckenar
rgreikrrtrtysfrtrks*krtsrrretygirtyrrgtsrsnsy*ksty*kggt*t*kr
rerrkrkrtkrkrtkg*rkrkeis*i*katkrekttttgrriifkt**cfinfkikywc*
*gwfli*iskekgtsfkgkaikfk*sfisflkeihiifi*yynin**r*fvqliiiiiii
hiflkkkkkkkkkkkkkkyiqkkii*likkkscvi*k

Frame B:
*rppftnpnnsyrylig*kkqtnlyy*ik*kkktxfkkk---

---*pipvh*w*ttq*tyrtl*smslhrcpsqvqsigsnttk*tcmrlrscpti*psgsr
vtlanappifyvaprvilafackflisrvss*ergvvv*srv*rigtnvgtvlerinyst
lnqnpiqqrwvvs**kqfkqldlvqrlpiyhrniqrcalkslhplehl*cwqimfli*rn
g*rywnhlvecllmkltfsvspvkryqkvvvvhssmmtmtmhddddenserkeqkrrlqe
qkmekerqekeriqaeekarqdeverqeririeqeqaerqfieqelaraeeerkerirqe
qeeqdrqeqerrrieeeemvklmieeeerrrkleekrqedlrkiqeeqellvkqqqefia
kqqqlelekqrqlqdqleedrrleelmlqmemdqeerikvkeeqerqeqeklelakkmqe
eeeklkeeqerirleqervekerqeeekrmelerieeerleairiekvriekeererkke
ekeekereqrekeqkdkerekklaefekqqkekkqqqqveelsskpddasstsksnigad
edgflseyqkkkeqvlkgkqsnsnnrsspsskkftsslfdittstddddlfn******ly
iff*kkkkkkkkkkkkknifkrksfn**kknlvsyk

Frame C:
ndhllliptilidi**vkknkqiciik*NKKKKPXLKKK---

---nqfpyidgrrhnerighckvclytgahlkcnr*gairpnehv*g*gvvqrydrqgag
lrwrmhhqsftwrqg*swplrasslfrgfhhekegwwfdqgfkeleqtlvqs*ke*itll
*ikirfnrdglyldenssns*tlyrgcrytieifkdvl*nrytr*nicnvgk*cf*yeem
grdigiis*nvcl*nslfrcrq*kdirrwwwfihq**r*rctmmmmkivkeknkredykn
kkwkknvkrknvfkqkrkhvkmklnvknvfvlnknkqnvnslnkswlvprrnvknvfvks
krnkivknkreeeskrrkwln**lkkrreeenskkrdkkilerfkrnknys*nnnknslq
nnnnsnlknkdnfkinskkidvwrn*cykwkwikknvskskrnknvknkrnsnlqrkckk
rkrn*kknknvfv*nkkelkknvkkkrnvwn*nvskrnvskqfvlkkyvlkrrnvnvkkk
rkkkkkenkekknkrikkekrn*lnlksnkkrknnnnrsknylqnlmmlhqlqnqilvlm
rmvsylnikrkrnkf*resnqiqiivhllpqrnshhlylilqhqlmtmicsinnnnnnyt
yffkkkkkkkkkkkkkkiyskenhlinkkkilchik

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15647-1 (Contig-U15647-1Q)
/CSM_Contig/Contig-U15647-1Q.Seq.d
(2031 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15647-1 (Contig-U15647-1Q) /CSM_Contig/Conti... 1263 0.0
Contig-U03281-1 (Contig-U03281-1Q) /CSM_Contig/Conti... 52 3e-06
Contig-U06984-1 (Contig-U06984-1Q) /CSM_Contig/Conti... 50 1e-05
Contig-U06710-1 (Contig-U06710-1Q) /CSM_Contig/Conti... 50 1e-05
Contig-U12823-1 (Contig-U12823-1Q) /CSM_Contig/Conti... 48 5e-05
Contig-U11796-1 (Contig-U11796-1Q) /CSM_Contig/Conti... 48 5e-05
Contig-U11235-1 (Contig-U11235-1Q) /CSM_Contig/Conti... 48 5e-05
Contig-U11070-1 (Contig-U11070-1Q) /CSM_Contig/Conti... 48 5e-05
Contig-U16505-1 (Contig-U16505-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U08964-1 (Contig-U08964-1Q) /CSM_Contig/Conti... 42 0.003

>Contig-U15647-1 (Contig-U15647-1Q) /CSM_Contig/Contig-U15647-1Q.Seq.d
Length = 2031

Score = 1263 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Plus


Query: 130 ataaccaattcccgtacattgatggtagacgacacaatgaacgtatcggacattgtaaag 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ataaccaattcccgtacattgatggtagacgacacaatgaacgtatcggacattgtaaag 189


Query: 190 tatgtctctacacaggtgcccatctcaagtgcaatcgatagggagcaatacgaccaaatg 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tatgtctctacacaggtgcccatctcaagtgcaatcgatagggagcaatacgaccaaatg 249


Query: 250 aacatgtatgaggttgaggagttgtccaacgatatgaccgtcagggagcagggttacgtt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aacatgtatgaggttgaggagttgtccaacgatatgaccgtcagggagcagggttacgtt 309


Query: 310 ggcgaatgcaccaccaatcttttacgtggcgccaagggtgatcttggcctttgcgtgcaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggcgaatgcaccaccaatcttttacgtggcgccaagggtgatcttggcctttgcgtgcaa 369


Query: 370 gttccttatttcgagggtttcatcatgagaaagaggggtggtggtttgatcaagggttta 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gttccttatttcgagggtttcatcatgagaaagaggggtggtggtttgatcaagggttta 429


Query: 430 aagaattggaacaaacgttggtacagtcttagaaagaataaattactctactttaaatca 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aagaattggaacaaacgttggtacagtcttagaaagaataaattactctactttaaatca 489


Query: 490 aaatccgattcaacagagatgggttgtatcttgatgaaaacagttcaaacagttagacct 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaatccgattcaacagagatgggttgtatcttgatgaaaacagttcaaacagttagacct 549


Query: 550 tgtacagaggttgccgatataccatcgaaatattcaaagatgtgctttgaaatcgttaca 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgtacagaggttgccgatataccatcgaaatattcaaagatgtgctttgaaatcgttaca 609


Query: 610 cccgctagaacatttgtaatgttggcaaataatgtttctgatatgaagaaatgggtagag 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cccgctagaacatttgtaatgttggcaaataatgtttctgatatgaagaaatgggtagag 669


Query: 670 atattggaatcatctcgtagaatgtttgcttatgaaactcactttttcggtgtcgccagt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 atattggaatcatctcgtagaatgtttgcttatgaaactcactttttcggtgtcgccagt 729


Query: 730 aaaaagatatcagaaggtggtggtggttcattcatca 766
|||||||||||||||||||||||||||||||||||||
Sbjct: 730 aaaaagatatcagaaggtggtggtggttcattcatca 766


Score = 509 bits (257), Expect = e-144
Identities = 257/257 (100%)
Strand = Plus / Plus


Query: 1675 ggtcgaagaattatcttcaaaacctgatgatgcttcatcaacttcaaaatcaaatattgg 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 ggtcgaagaattatcttcaaaacctgatgatgcttcatcaacttcaaaatcaaatattgg 1734


Query: 1735 tgctgatgaggatggtttcttatctgaatatcaaaagaaaaaggaacaagttttaaaggg 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 tgctgatgaggatggtttcttatctgaatatcaaaagaaaaaggaacaagttttaaaggg 1794


Query: 1795 aaagcaatcaaattcaaataatcgttcatctccttcctcaaagaaattcacatcatcttt 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 aaagcaatcaaattcaaataatcgttcatctccttcctcaaagaaattcacatcatcttt 1854


Query: 1855 atttgatattacaacatcaactgatgacgatgatttgttcaattaataataataataata 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 atttgatattacaacatcaactgatgacgatgatttgttcaattaataataataataata 1914


Query: 1915 attatacatattttttt 1931
|||||||||||||||||
Sbjct: 1915 attatacatattttttt 1931


Score = 317 bits (160), Expect = 4e-86
Identities = 160/160 (100%)
Strand = Plus / Plus


Query: 1239 ttcaagatcaactcgaagaagatagacgtttggaggaattaatgttacaaatggaaatgg 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 ttcaagatcaactcgaagaagatagacgtttggaggaattaatgttacaaatggaaatgg 1298


Query: 1299 atcaagaagaacgtatcaaagtcaaagaggaacaagaacgtcaagaacaagagaaactcg 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 atcaagaagaacgtatcaaagtcaaagaggaacaagaacgtcaagaacaagagaaactcg 1358


Query: 1359 aacttgcaaagaaaatgcaagaagaggaagagaaattaaa 1398
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 aacttgcaaagaaaatgcaagaagaggaagagaaattaaa 1398


Score = 317 bits (160), Expect = 4e-86
Identities = 160/160 (100%)
Strand = Plus / Plus


Query: 855 aagaacgtcaagagaaagaacgtattcaagcagaagagaaagcacgtcaagatgaagttg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 aagaacgtcaagagaaagaacgtattcaagcagaagagaaagcacgtcaagatgaagttg 914


Query: 915 aacgtcaagaacgtattcgtattgaacaagaacaagcagaacgtcaattcattgaacaag 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 aacgtcaagaacgtattcgtattgaacaagaacaagcagaacgtcaattcattgaacaag 974


Query: 975 agttggctcgtgccgaggaggaacgtaaagaacgtattcg 1014
||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 agttggctcgtgccgaggaggaacgtaaagaacgtattcg 1014


Score = 180 bits (91), Expect = 6e-45
Identities = 91/91 (100%)
Strand = Plus / Plus


Query: 1462 gaaacgtatggaattagaacgtatcgaagaggaacgtctcgaagcaattcgtattgaaaa 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 gaaacgtatggaattagaacgtatcgaagaggaacgtctcgaagcaattcgtattgaaaa 1521


Query: 1522 agtacgtattgaaaaggaggaacgtgaacgt 1552
|||||||||||||||||||||||||||||||
Sbjct: 1522 agtacgtattgaaaaggaggaacgtgaacgt 1552


Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Plus


Query: 1 ttaacgaccaccttttactaatcccaacaattcttatagatatttaatagg 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaacgaccaccttttactaatcccaacaattcttatagatatttaatagg 51


Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Plus


Query: 1141 tcttagaaagattcaagaggaacaagaattactc 1174
||||||||||||||||||||||||||||||||||
Sbjct: 1141 tcttagaaagattcaagaggaacaagaattactc 1174


Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 1975 tatattcaaaagaaaatcatttaattaat 2003
|||||||||||||||||||||||||||||
Sbjct: 1975 tatattcaaaagaaaatcatttaattaat 2003


Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus


Query: 1323 aagaggaacaagaacgtcaagaacaagaga 1352
||||||||||||| ||||||||||||||||
Sbjct: 1023 aagaggaacaagatcgtcaagaacaagaga 1052


Score = 40.1 bits (20), Expect = 0.013
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 1332 aagaacgtcaagaacaagagaaac 1355
|||||||||||||| |||||||||
Sbjct: 1443 aagaacgtcaagaagaagagaaac 1466


Score = 38.2 bits (19), Expect = 0.052
Identities = 25/27 (92%)
Strand = Plus / Plus


Query: 920 caagaacgtattcgtattgaacaagaa 946
||||||||||||||| | |||||||||
Sbjct: 1406 caagaacgtattcgtttagaacaagaa 1432


Score = 34.2 bits (17), Expect = 0.81
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 914 gaacgtcaagaacgtattcgt 934
|||||| ||||||||||||||
Sbjct: 995 gaacgtaaagaacgtattcgt 1015


>Contig-U03281-1 (Contig-U03281-1Q) /CSM_Contig/Contig-U03281-1Q.Seq.d
Length = 617

Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 1892 ttcaattaataataataataataatt 1917
||||||||||||||||||||||||||
Sbjct: 341 ttcaattaataataataataataatt 366


>Contig-U06984-1 (Contig-U06984-1Q) /CSM_Contig/Contig-U06984-1Q.Seq.d
Length = 542

Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 1892 ttcaattaataataataataataat 1916
|||||||||||||||||||||||||
Sbjct: 458 ttcaattaataataataataataat 482


Score = 38.2 bits (19), Expect = 0.052
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1898 taataataataataataat 1916
|||||||||||||||||||
Sbjct: 20 taataataataataataat 38


Score = 38.2 bits (19), Expect = 0.052
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1898 taataataataataataat 1916
|||||||||||||||||||
Sbjct: 17 taataataataataataat 35


Score = 36.2 bits (18), Expect = 0.21
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1899 aataataataataataat 1916
||||||||||||||||||
Sbjct: 15 aataataataataataat 32


Score = 36.2 bits (18), Expect = 0.21
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1898 taataataataataataa 1915
||||||||||||||||||
Sbjct: 221 taataataataataataa 238


Score = 36.2 bits (18), Expect = 0.21
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1899 aataataataataataat 1916
||||||||||||||||||
Sbjct: 219 aataataataataataat 236


Score = 36.2 bits (18), Expect = 0.21
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 1898 taataataataataataa 1915
||||||||||||||||||
Sbjct: 23 taataataataataataa 40


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 51,215
Number of Sequences: 8402
Number of extensions: 51215
Number of successful extensions: 22089
Number of sequences better than 10.0: 1958
length of query: 2031
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2014
effective length of database: 7,932,708
effective search space: 15976473912
effective search space used: 15976473912
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 4
Homology vs DNA
Query= Contig-U15647-1 (Contig-U15647-1Q) /CSM_Contig/Contig-U15647-1Q.Seq.d
(2031 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ377943) Dictyostelium discoideum cDNA clone:ddc26c14, 3' ... 1263 0.0 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 1241 0.0 1
(AU265626) Dictyostelium discoideum vegetative cDNA clone:VS... 509 e-164 3
(AU265627) Dictyostelium discoideum vegetative cDNA clone:VS... 416 e-150 5
(AU271116) Dictyostelium discoideum vegetative cDNA clone:VS... 507 e-139 1
(AU271117) Dictyostelium discoideum vegetative cDNA clone:VS... 484 e-132 1
(AU263035) Dictyostelium discoideum vegetative cDNA clone:VS... 466 e-126 1
(BJ343146) Dictyostelium discoideum cDNA clone:dda22m06, 3' ... 228 e-118 4
(AU263376) Dictyostelium discoideum vegetative cDNA clone:VS... 371 e-100 2
(AU265152) Dictyostelium discoideum vegetative cDNA clone:VS... 377 1e-99 1
(BJ370672) Dictyostelium discoideum cDNA clone:ddc54o24, 5' ... 190 2e-87 2
(AU265785) Dictyostelium discoideum vegetative cDNA clone:VS... 305 3e-78 1
(BJ372058) Dictyostelium discoideum cDNA clone:ddc11i01, 3' ... 190 3e-65 2
(BJ384765) Dictyostelium discoideum cDNA clone:ddc50k13, 3' ... 167 1e-53 2
(AU265153) Dictyostelium discoideum vegetative cDNA clone:VS... 218 6e-52 1
(AU265786) Dictyostelium discoideum vegetative cDNA clone:VS... 133 3e-26 1
(BJ369455) Dictyostelium discoideum cDNA clone:ddc50k13, 5' ... 105 6e-18 1
(BJ358726) Dictyostelium discoideum cDNA clone:ddc11i01, 5' ... 101 1e-16 1
(EJ235589) 1092405931879 Global-Ocean-Sampling_GS-27-01-01-1... 64 2e-05 1
(BX088525) Zebrafish DNA sequence from clone DKEYP-51F8 in l... 52 7e-05 2
(CT573259) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 7e-05 2
(AC140081) Danio rerio strain Tue clone CH211-253G17, WORKIN... 52 7e-05 2
(BH928996) odi81e07.b1 B.oleracea002 Brassica oleracea genom... 60 3e-04 1
(BH603204) BOHGC26TF BOHG Brassica oleracea genomic clone BO... 60 3e-04 1
(CR450781) Zebrafish DNA sequence from clone DKEY-20O6 in li... 58 0.001 1
(AC151574) Mus musculus BAC clone RP23-430A4 from 7, complet... 58 0.001 1
(AC116132) Mus musculus chromosome 7 clone RP23-100A3 map 7,... 58 0.001 1
(AC177156) Strongylocentrotus purpuratus clone R3-4015D06, W... 58 0.001 1
(CR854927) Zebrafish DNA sequence from clone DKEY-40M6 in li... 56 0.005 1
(CR381686) Zebrafish DNA sequence from clone CH211-179L5 in ... 56 0.005 1
(CR381602) Zebrafish DNA sequence from clone DKEY-183M22 in ... 56 0.005 1
(BX936331) Zebrafish DNA sequence from clone CH211-1C10 in l... 56 0.005 1
(BX901909) Zebrafish DNA sequence from clone CH211-42I14 in ... 56 0.005 1
(BX663614) Zebrafish DNA sequence from clone DKEY-148L2 in l... 56 0.005 1
(BX649639) Zebrafish DNA sequence from clone CH211-102G22 in... 56 0.005 1
(BX004867) Zebrafish DNA sequence from clone CH211-159K2 in ... 56 0.005 1
(BX000521) Zebrafish DNA sequence from clone CH211-137C8 in ... 56 0.005 1
(AL928660) Zebrafish DNA sequence from clone CH211-257L15. 56 0.005 1
(AL591676) Zebrafish DNA sequence from clone BUSM1-259M24 in... 56 0.005 1
(AM459651) Vitis vinifera, whole genome shotgun sequence, co... 56 0.005 1
(CU638714) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 56 0.005 1
(AC199996) Colobus guereza clone CH272-472N12, WORKING DRAFT... 56 0.005 1
(DY892404) CeleSEQ10625 Cunninghamella elegans pBluescript (... 56 0.005 1
(CU633817) Zebrafish DNA sequence from clone CH1073-250I23 i... 54 0.021 1
(CU137682) Zebrafish DNA sequence from clone DKEY-197A14 in ... 54 0.021 1
(CT025588) Zebrafish DNA sequence from clone DKEY-29B11 in l... 54 0.021 1
(CR931779) Zebrafish DNA sequence from clone DKEY-251J8 in l... 54 0.021 1
(CR769770) Zebrafish DNA sequence from clone RP71-12D15 in l... 54 0.021 1
(CR524828) Zebrafish DNA sequence from clone CH211-22G2 in l... 54 0.021 1
(CR376853) Zebrafish DNA sequence from clone CH211-198N7 in ... 54 0.021 1
(CR352252) Zebrafish DNA sequence from clone CH211-181P13 in... 54 0.021 1
(BX571682) Zebrafish DNA sequence from clone CH211-176D16 in... 54 0.021 1
(AC165224) Mus musculus chromosome 5, clone RP24-389L10, com... 54 0.021 1
(AC154536) Mus musculus BAC clone RP23-449K2 from chromosome... 54 0.021 1
(AC154298) Mus musculus BAC clone RP23-399K17 from chromosom... 54 0.021 1
(AC118050) Mus musculus chromosome 5 clone RP24-371D5 map 5,... 54 0.021 1
(CU633481) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 54 0.021 1
(CR589945) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.021 1
(AC211281) Oryza glaberrima clone OG_BBa0060E16, *** SEQUENC... 54 0.021 1
(AC179486) Strongylocentrotus purpuratus clone R3-63P12, WOR... 54 0.021 1
(AZ452447) 1M0252M18F Mouse 10kb plasmid UUGC1M library Mus ... 54 0.021 1
(AL740109) Danio rerio genomic clone DKEY-15J22, genomic sur... 54 0.021 1
(DE439689) Bombyx mori genomic DNA, Fosmid clone:GBMFno27_n1... 54 0.021 1
(EY387468) CAXA6777.rev CAXA Helobdella robusta Subtracted L... 54 0.021 1
(EY376078) CAXA15979.rev CAXA Helobdella robusta Subtracted ... 54 0.021 1
(EY366270) CAXA10642.rev CAXA Helobdella robusta Subtracted ... 54 0.021 1
(EX849676) CBNC8058.rev CBNC Phycomyces blakesleeanus NRRL15... 54 0.021 1
(EX846550) CBNC6454.rev CBNC Phycomyces blakesleeanus NRRL15... 54 0.021 1
(EX654084) 256822331 Pea aphid whole body normalized full le... 46 0.035 2
(FF329209) 280438411 Pea aphid whole body normalized full le... 46 0.038 2
(EX614313) 255384590 Pea aphid whole body normalized full le... 46 0.039 2
(EX643396) 256650359 Pea aphid whole body normalized full le... 46 0.040 2
(EX606546) 255357317 Pea aphid whole body normalized full le... 46 0.040 2
(FF337524) 280466149 Pea aphid whole body normalized full le... 46 0.041 2
(EX633626) 256589271 Pea aphid whole body normalized full le... 46 0.041 2
(AZ688550) ENTLK29TR Entamoeba histolytica Sheared DNA Entam... 52 0.045 2
(CN754003) ID0AAA11DB04RM1 ApMS Acyrthosiphon pisum cDNA clo... 46 0.046 2
(AC156378) Rhinolophus ferrumequinum clone VMRC7-175G17, WOR... 42 0.053 2
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 50 0.054 4
(AC198067) Lottia scutum clone JGIAZYH-5D6, complete sequence. 38 0.056 2
(CK499720) rswbb0_010259.y1 swb Bombyx mori cDNA, mRNA seque... 42 0.067 2
(CK494394) rswbb0_002138.y1 swb Bombyx mori cDNA, mRNA seque... 42 0.068 2
(EE674481) EST1577 Mycelia Grown in Nitrogen Limited Media C... 42 0.068 2
(BX548043) Zebrafish DNA sequence from clone DKEY-81J8 in li... 42 0.070 6
(U75996) Xenopus laevis eomesodermin mRNA, complete cds. 52 0.084 1
(CU695074) Zebrafish DNA sequence from clone CH73-243B8 in l... 52 0.084 1
(CU607077) Zebrafish DNA sequence from clone CH1073-435J7 in... 52 0.084 1
(CU074421) Zebrafish DNA sequence from clone DKEY-172O7 in l... 52 0.084 1
(CT573403) Zebrafish DNA sequence from clone CH211-101A21 in... 52 0.084 1
(CR936974) Zebrafish DNA sequence from clone DKEY-8N23 in li... 52 0.084 1
(CR786582) Zebrafish DNA sequence from clone DKEYP-14C8 in l... 52 0.084 1
(CR759746) Zebrafish DNA sequence from clone DKEY-253O14 in ... 52 0.084 1
(CR524829) Zebrafish DNA sequence from clone CH211-227N11 in... 52 0.084 1
(CR450727) Zebrafish DNA sequence from clone CH211-158E19 in... 52 0.084 1
(CR405705) Zebrafish DNA sequence from clone DKEY-64E13 in l... 52 0.084 1
(CR391995) Zebrafish DNA sequence from clone CH211-229I10. 52 0.084 1
(CR388035) Zebrafish DNA sequence from clone DKEY-104O19. 52 0.084 1
(CR376770) Zebrafish DNA sequence from clone DKEY-157L19 in ... 52 0.084 1
(BX957286) Zebrafish DNA sequence from clone CH211-119B12 in... 52 0.084 1
(BX649392) Zebrafish DNA sequence from clone DKEY-84J12 in l... 52 0.084 1
(BX537293) Zebrafish DNA sequence from clone DKEYP-40D11 in ... 52 0.084 1
(BX537134) Zebrafish DNA sequence from clone CH211-205J6. 52 0.084 1
(BX511113) Zebrafish DNA sequence from clone DKEY-38J10 in l... 52 0.084 1
(BX510302) Zebrafish DNA sequence from clone RP71-81M21. 52 0.084 1
(BX470160) Zebrafish DNA sequence from clone DKEY-25F3 in li... 52 0.084 1
(BX465229) Zebrafish DNA sequence from clone CH211-174D2 in ... 52 0.084 1
(BX323558) Zebrafish DNA sequence from clone CH211-214J24 in... 52 0.084 1
(BX248328) Zebrafish DNA sequence from clone CH211-202H10 in... 52 0.084 1
(BX247868) Zebrafish DNA sequence from clone DKEY-253A1 in l... 52 0.084 1
(BX005137) Zebrafish DNA sequence from clone CH211-167L17 in... 52 0.084 1
(BX005071) Zebrafish DNA sequence from clone CH211-139O14 in... 52 0.084 1
(BX005024) Zebrafish DNA sequence from clone DKEY-211F1 in l... 52 0.084 1
(BC125986) Xenopus laevis eomesodermin, mRNA (cDNA clone MGC... 52 0.084 1
(AL935207) Zebrafish DNA sequence from clone CH211-251J8. 52 0.084 1
(AL672072) Zebrafish DNA sequence from clone BUSM1-55H21 in ... 52 0.084 1
(BV682779) GBL032566 Ensembl chicken genome sequences browse... 52 0.084 1
(BV229933) S233P6128FC9.T0 LabradorRetriever Canis familiari... 52 0.084 1
(AL645726) Mouse DNA sequence from clone RP23-45M23 on chrom... 52 0.084 1
(AC155840) Mus musculus 6 BAC RP24-223C8 (Roswell Park Cance... 52 0.084 1
(AC144858) Mus musculus BAC clone RP24-144F3 from 8, complet... 52 0.084 1
(AC139295) Mus musculus BAC clone RP24-131B6 from chromosome... 52 0.084 1
(AC131742) Mus musculus BAC clone RP23-67I3 from chromosome ... 52 0.084 1
(AC130220) Mus musculus BAC clone RP23-140M6 from chromosome... 52 0.084 1
(AC111124) Mus musculus chromosome 7, clone RP23-331A21, com... 52 0.084 1
(AC110039) Mus musculus chromosome 7, clone RP23-264N6, comp... 52 0.084 1
(AM453473) Vitis vinifera contig VV78X088399.5, whole genome... 52 0.084 1
(AC216765) Populus trichocarpa clone POP021-F16, complete se... 52 0.084 1
(AC208087) Populus trichocarpa clone JGIACSB05-D20, complete... 52 0.084 1
(AC174280) Medicago truncatula clone mth2-11n6, complete seq... 52 0.084 1
(AX345283) Sequence 354 from Patent WO0200928. 52 0.084 1
(X54889) Sea urchin developmentally regulated ectodermal gene. 52 0.084 1
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 52 0.084 1
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 52 0.084 1
(AF200688) Dictyostelium discoideum tyrosine kinase ZAK1 mRN... 52 0.084 1
(AC189672) Trichinella spiralis BAC clone TS195-18H12 from c... 52 0.084 1
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 52 0.084 1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 52 0.084 1
(AC005155) Homo sapiens PAC clone RP5-877J2 from 7p14-p15, c... 52 0.084 1
(AC145502) Canis lupus familiaris clone RP81-204N10, WORKING... 52 0.084 1
(AC141353) Ornithorhynchus anatinus clone OA_Bb-477E14, WORK... 52 0.084 1
(AC121377) Rattus norvegicus clone CH230-459B10, *** SEQUENC... 52 0.084 1
(AC096167) Rattus norvegicus clone CH230-11H9, WORKING DRAFT... 52 0.084 1
(FP017128) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.084 1
(FP016143) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.084 1
(CU929335) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.084 1
(CU929098) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.084 1
(CR762492) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 52 0.084 1
(CR376830) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.084 1
(BX957327) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.084 1
(AL645984) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 52 0.084 1
(AL645983) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 52 0.084 1
(AC202633) Saimiri boliviensis boliviensis clone CH254-154G1... 52 0.084 1
(AC201700) Chlorocebus aethiops clone CH252-372P9, WORKING D... 52 0.084 1
(AC201478) Strongylocentrotus purpuratus clone R3-3055D10, W... 52 0.084 1
(AC200715) Macaca mulatta clone CH250-311J21, WORKING DRAFT ... 52 0.084 1
(AC184594) Strongylocentrotus purpuratus clone R3-3110A9, WO... 52 0.084 1
(AC181541) Strongylocentrotus purpuratus clone R3-1109O23, W... 52 0.084 1
(AC180777) Strongylocentrotus purpuratus clone R3-3075I13, W... 52 0.084 1
(AC179905) Strongylocentrotus purpuratus clone R3-1003I7, WO... 52 0.084 1
(AC178846) Strongylocentrotus purpuratus clone R3-26F6, WORK... 52 0.084 1
(AC178701) Strongylocentrotus purpuratus clone R3-3006F08, W... 52 0.084 1
(AC178219) Strongylocentrotus purpuratus clone R3-3085K11, W... 52 0.084 1
(AC178134) Strongylocentrotus purpuratus clone R3-3078F5, WO... 52 0.084 1
(AC178020) Strongylocentrotus purpuratus clone R3-3055E10, W... 52 0.084 1
(AC177318) Strongylocentrotus purpuratus clone R3-1032N20, W... 52 0.084 1
(AC177283) Strongylocentrotus purpuratus clone R3-1033G9, WO... 52 0.084 1
(AC176628) Strongylocentrotus purpuratus clone R3-114B21, WO... 52 0.084 1
(AC174253) Strongylocentrotus purpuratus clone R3-3039P7, WO... 52 0.084 1
(AC174129) Strongylocentrotus purpuratus clone R3-1023C6, WO... 52 0.084 1
(AC163927) Bos taurus clone CH240-130L5, WORKING DRAFT SEQUE... 52 0.084 1
(AC007044) Homo sapiens chromosome UNK clone CTA-435J10, WOR... 52 0.084 1
(BH192570) TC3-59L15.TP TC3 Trypanosoma cruzi genomic clone ... 52 0.084 1
(BH148597) ENTQG20TF Entamoeba histolytica Sheared DNA Entam... 52 0.084 1
(AZ765814) 1M0562P19R Mouse 10kb plasmid UUGC1M library Mus ... 52 0.084 1
(AZ675756) ENTMH15TR Entamoeba histolytica Sheared DNA Entam... 52 0.084 1
(AZ669483) ENTKQ92TF Entamoeba histolytica Sheared DNA Entam... 52 0.084 1
(AZ534343) ENTCX85TF Entamoeba histolytica Sheared DNA Entam... 52 0.084 1
(AZ532398) ENTBD79TF Entamoeba histolytica Sheared DNA Entam... 52 0.084 1
(AZ000804) RPCI-23-339O23.TVB RPCI-23 Mus musculus genomic c... 52 0.084 1
(ET229021) S0217J18_SP6 CHORI-214 Salmo salar genomic clone ... 52 0.084 1
(ED726063) GM_WBb0081C14.f GM_WBb Glycine max genomic clone ... 52 0.084 1
(DX946688) CHORI105-38G4.TR CHORI105.pEpiFOS5 Trypanosoma cr... 52 0.084 1
(DX944419) CHORI105-34J4.TR CHORI105.pEpiFOS5 Trypanosoma cr... 52 0.084 1
(DX466314) Cpl08193 Papaya Genomic DNA BAC Library Carica pa... 52 0.084 1
(DU877506) 220540 Tomato HindIII BAC Library Solanum lycoper... 52 0.084 1
(CZ499281) GMW2-32E13a.g1 GMW2 Glycine max genomic, genomic ... 52 0.084 1
(CT506545) A BAC library has been constructed from cultivar ... 52 0.084 1
(CT500820) A BAC library has been constructed from cultivar ... 52 0.084 1
(CE366955) tigr-gss-dog-17000362020518 Dog Library Canis lup... 52 0.084 1
(CE028248) tigr-gss-dog-17000337520940 Dog Library Canis lup... 52 0.084 1
(BZ034615) oei08f07.b1 B.oleracea002 Brassica oleracea genom... 52 0.084 1
(BX169457) Danio rerio genomic clone DKEY-171D7, genomic sur... 52 0.084 1
(DY888253) CeleSEQ5059 Cunninghamella elegans pBluescript (E... 52 0.084 1
(DV147103) CV03071B1G12.f1 CV03-normalized library Euphorbia... 52 0.084 1
(DT078810) AGENCOURT_56130469 NICHD_XGC_FaBN Xenopus laevis ... 52 0.084 1
(DC063765) Xenopus laevis NBRP cDNA clone:xlk159a04ex, 5' end. 52 0.084 1
(DC030253) Xenopus laevis NBRP cDNA clone:rxlk159a04ex, 3' end. 52 0.084 1
(DC029238) Xenopus laevis NBRP cDNA clone:rxlk155l18ex, 3' end. 52 0.084 1
(DC017577) Xenopus laevis NBRP cDNA clone:rxlk147g13ex, 3' end. 52 0.084 1
(DC002322) Xenopus laevis NBRP cDNA clone:rxlk58i01ex, 3' end. 52 0.084 1
(AM548434) Paracentrotus lividus EST, clone MPMGp1171J22117Q... 52 0.084 1
(CF578394) AGENCOURT_8783083_updated NIH_MGC_137 Mus musculu... 52 0.084 1
(CA044637) ssalplnb503193 gut Salmo salar cDNA, mRNA sequence. 52 0.084 1
(BJ359629) Dictyostelium discoideum cDNA clone:ddc15n17, 5' ... 52 0.084 1
(FD364868) CBPN4409.b1 CBPN: Subtracted channel catfish cDNA... 52 0.084 1
(FD154694) CBZC23098.g1 CBZC: Normalized blue catfish cDNA l... 52 0.084 1
(FD073902) CBFH1595.g1 CBFH: Normalized blue catfish cDNA li... 52 0.084 1
(FD055081) CBPO3473.b1 CBPO: Normalized channel catfish cDNA... 52 0.084 1
(FC678253) CAXX12454.rev CAXX Lottia gigantea from male gona... 52 0.084 1
(EY312435) CAWX24015.rev CAWX Helobdella robusta Primary Ear... 52 0.084 1
(EY303138) CAWX16548.rev CAWX Helobdella robusta Primary Ear... 52 0.084 1
(BX129582) Danio rerio genomic clone DKEY-261O16, genomic su... 44 0.10 3
(AU053367) Dictyostelium discoideum slug cDNA, clone SLI471. 46 0.11 2
(ER864276) PPTI514TF Solanum tuberosum RHPOTKEY BAC ends Sol... 38 0.11 2
(AU053294) Dictyostelium discoideum slug cDNA, clone SLI332. 46 0.11 2
(AU262625) Dictyostelium discoideum vegetative cDNA clone:VS... 46 0.12 2
(AU052318) Dictyostelium discoideum slug cDNA, clone SLD136. 46 0.12 2
(AU037491) Dictyostelium discoideum slug cDNA, clone SSD702. 46 0.13 2
(BJ346107) Dictyostelium discoideum cDNA clone:dda29j05, 3' ... 46 0.13 2
(AY160105) Dictyostelium discoideum nucleotide exchange fact... 40 0.13 3
(AC113780) Rattus norvegicus clone CH230-94H3, WORKING DRAFT... 42 0.13 3
(BJ344534) Dictyostelium discoideum cDNA clone:dda19l17, 3' ... 46 0.13 2
(BX237098) Danio rerio genomic clone DKEY-261L15, genomic su... 44 0.14 3
(BQ274052) ky01c02.y3 Parastrongyloides trichosuri PA SL1 TO... 42 0.15 2
(BJ343105) Dictyostelium discoideum cDNA clone:dda22e05, 3' ... 46 0.15 2
(EI381224) POTBW12TR Solanum tuberosum RHPOTKEY BAC ends Sol... 38 0.15 2
(EY333127) CAWY548.rev CAWY Helobdella robusta Subtracted Ea... 50 0.16 2
(BX158351) Danio rerio genomic clone DKEY-150N20, genomic su... 50 0.16 2
(AF482386) Dictyostelium discoideum ABC transporter AbcG7 (a... 48 0.16 2
(AC178321) Strongylocentrotus purpuratus clone R3-1114L16, W... 50 0.18 3
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 46 0.19 2
(CT967325) Zebrafish DNA sequence from clone DKEY-25K11. 40 0.19 2
(CT737160) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.19 2
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 40 0.19 2
(AL672184) Mouse DNA sequence from clone RP23-421G11 on chro... 40 0.19 2
(BX649334) Zebrafish DNA sequence from clone DKEYP-6A3 in li... 46 0.19 2
(AC107838) Mus musculus chromosome 1, clone RP23-274N9, comp... 40 0.19 2
(CR848715) Zebrafish DNA sequence from clone RP71-23N3. 40 0.19 2
(FP016230) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.20 2
(AX392737) Sequence 27 from Patent WO0212526. 40 0.21 2
(AR707084) Sequence 27 from patent US 6933145. 40 0.21 2
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 44 0.21 5
(BM513401) kx89c02.y1 Parastrongyloides trichosuri PA SL1 TO... 42 0.23 2
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 48 0.24 3
(BM514228) kx98b05.y1 Parastrongyloides trichosuri PA SL1 TO... 42 0.28 2
(CU896660) Zebrafish DNA sequence from clone CH1073-411A17 i... 50 0.33 1
(CU861890) Zebrafish DNA sequence from clone CH1073-21K6 in ... 50 0.33 1
(CU855690) Zebrafish DNA sequence from clone CH73-211K12 in ... 50 0.33 1
(CU855579) Zebrafish DNA sequence from clone CH73-263O4 in l... 50 0.33 1
(CU694269) Zebrafish DNA sequence from clone CH73-169F6 in l... 50 0.33 1
(CU467869) Zebrafish DNA sequence from clone CH73-337L15 in ... 50 0.33 1
(CU467636) Zebrafish DNA sequence from clone CH73-325A8 in l... 50 0.33 1
(CU467614) Zebrafish DNA sequence from clone CH211-117A13 in... 50 0.33 1
(CU462910) Zebrafish DNA sequence from clone CH73-123I13 in ... 50 0.33 1
(CU462859) Zebrafish DNA sequence from clone CH211-245K15 in... 50 0.33 1
(CU459013) Zebrafish DNA sequence from clone CH73-57K5 in li... 50 0.33 1
(CU457789) Zebrafish DNA sequence from clone DKEY-166G24 in ... 50 0.33 1
(CU372926) Zebrafish DNA sequence from clone DKEY-147F23 in ... 50 0.33 1
(CU302223) Zebrafish DNA sequence from clone CH73-58A17 in l... 50 0.33 1
(CU207354) Zebrafish DNA sequence from clone DKEY-219E24 in ... 50 0.33 1
(CU207214) Zebrafish DNA sequence from clone CH211-106K22. 50 0.33 1
(CU179729) Zebrafish DNA sequence from clone CH211-182K24 in... 50 0.33 1
(CU179656) Zebrafish DNA sequence from clone CH211-204J14. 50 0.33 1
(CU104717) Zebrafish DNA sequence from clone CH73-40D10 in l... 50 0.33 1
(CT997808) Zebrafish DNA sequence from clone RP71-7E23 in li... 50 0.33 1
(CT955984) Zebrafish DNA sequence from clone CH73-165P10 in ... 50 0.33 1
(CT737148) Zebrafish DNA sequence from clone CH211-149K21 in... 50 0.33 1
(CT583723) Zebrafish DNA sequence from clone DKEY-33B17 in l... 50 0.33 1
(CT583628) Zebrafish DNA sequence from clone CH211-87D12 in ... 50 0.33 1
(CT583627) Zebrafish DNA sequence from clone CH211-251B8 in ... 50 0.33 1
(CT573168) Zebrafish DNA sequence from clone CH211-91A13 in ... 50 0.33 1
(CT573161) Zebrafish DNA sequence from clone CH73-380N15 in ... 50 0.33 1
(CR933017) Zebrafish DNA sequence from clone DKEY-11D18 in l... 50 0.33 1
(CR925772) Zebrafish DNA sequence from clone DKEY-202G17 in ... 50 0.33 1
(CR855331) Zebrafish DNA sequence from clone CH211-153F2 in ... 50 0.33 1
(CR855131) Zebrafish DNA sequence from clone DKEY-69A10 in l... 50 0.33 1
(CR854821) Zebrafish DNA sequence from clone DKEY-35H2 in li... 50 0.33 1
(CR848821) Zebrafish DNA sequence from clone CH211-210H15. 50 0.33 1
(CR848817) Zebrafish DNA sequence from clone DKEY-211I2 in l... 50 0.33 1
(CR847977) Zebrafish DNA sequence from clone DKEY-86M16 in l... 50 0.33 1
(CR847806) Zebrafish DNA sequence from clone CH211-267J10 in... 50 0.33 1
(CR788285) Zebrafish DNA sequence from clone DKEYP-99C4 in l... 50 0.33 1
(CR769785) Zebrafish DNA sequence from clone DKEY-1N3 in lin... 50 0.33 1
(CR762487) Zebrafish DNA sequence from clone CH211-197G14 in... 50 0.33 1
(CR759874) Zebrafish DNA sequence from clone CH211-214H24 in... 50 0.33 1
(CR759841) Zebrafish DNA sequence from clone DKEY-192G7 in l... 50 0.33 1
(CR759774) Zebrafish DNA sequence from clone CH211-147P17 in... 50 0.33 1
(CR752641) Zebrafish DNA sequence from clone DKEY-1P18 in li... 50 0.33 1
(CR735107) Zebrafish DNA sequence from clone CH211-127B16 in... 50 0.33 1
(CR457461) Zebrafish DNA sequence from clone DKEY-23O10 in l... 50 0.33 1
(CR394543) Zebrafish DNA sequence from clone DKEY-26A2 in li... 50 0.33 1
(CR392038) Zebrafish DNA sequence from clone DKEY-172J4 in l... 50 0.33 1
(CR392011) Zebrafish DNA sequence from clone DKEY-272L17 in ... 50 0.33 1
(CR391908) Zebrafish DNA sequence from clone DKEY-225E11 in ... 50 0.33 1
(CR388185) Zebrafish DNA sequence from clone CH211-256G21 in... 50 0.33 1
(CR388176) Zebrafish DNA sequence from clone DKEY-109D19 in ... 50 0.33 1
(CR388147) Zebrafish DNA sequence from clone DKEYP-72E1 in l... 50 0.33 1
(CR387991) Zebrafish DNA sequence from clone CH211-285C3 in ... 50 0.33 1
(CR385021) Zebrafish DNA sequence from clone CH211-200N15 in... 50 0.33 1
(CR384069) Zebrafish DNA sequence from clone DKEY-75B17 in l... 50 0.33 1
(CR381553) Zebrafish DNA sequence from clone CH211-154P8 in ... 50 0.33 1
(CR376772) Zebrafish DNA sequence from clone CH211-244C20 in... 50 0.33 1
(CR361566) Zebrafish DNA sequence from clone CH211-248E11 in... 50 0.33 1
(CR356240) Zebrafish DNA sequence from clone CH211-226E7 in ... 50 0.33 1
(CR354373) Zebrafish DNA sequence from clone DKEY-75C23 in l... 50 0.33 1
(CR352286) Zebrafish DNA sequence from clone CH211-93A20 in ... 50 0.33 1
(CR352284) Zebrafish DNA sequence from clone DKEY-89F23 in l... 50 0.33 1
(BX957352) Zebrafish DNA sequence from clone CH211-114O15 in... 50 0.33 1
(BX957245) Zebrafish DNA sequence from clone CH211-192N14 in... 50 0.33 1
(BX957236) Zebrafish DNA sequence from clone DKEY-178O3 in l... 50 0.33 1
(BX957233) Zebrafish DNA sequence from clone DKEY-224H10 in ... 50 0.33 1
(BX950857) Zebrafish DNA sequence from clone CH211-203D19 in... 50 0.33 1
(BX942828) Zebrafish DNA sequence from clone CH211-237F16 in... 50 0.33 1
(BX927292) Zebrafish DNA sequence from clone CH211-197O22 in... 50 0.33 1
(BX927282) Zebrafish DNA sequence from clone DKEY-49O11 in l... 50 0.33 1
(BX927185) Zebrafish DNA sequence from clone CH211-198G1 in ... 50 0.33 1
(BX927174) Zebrafish DNA sequence from clone DKEY-96F10 in l... 50 0.33 1
(BX914204) Zebrafish DNA sequence from clone CH211-113E18 in... 50 0.33 1
(BX914203) Zebrafish DNA sequence from clone CH211-22E19 in ... 50 0.33 1
(BX908742) Zebrafish DNA sequence from clone DKEY-246G23 in ... 50 0.33 1
(BX682544) Zebrafish DNA sequence from clone CH211-189G6 in ... 50 0.33 1
(BX663499) Zebrafish DNA sequence from clone CH211-160I2 in ... 50 0.33 1
(BX649492) Zebrafish DNA sequence from clone DKEY-13P3 in li... 50 0.33 1
(BX649406) Zebrafish DNA sequence from clone CH211-203N20 in... 50 0.33 1
(BX649333) Zebrafish DNA sequence from clone DKEY-200F3 in l... 50 0.33 1
(BX572620) Zebrafish DNA sequence from clone CH211-202G13 in... 50 0.33 1
(BX572104) Zebrafish DNA sequence from clone DKEY-5K4 in lin... 50 0.33 1
(BX571723) Zebrafish DNA sequence from clone DKEYP-51D5 in l... 50 0.33 1
(BX548032) Zebrafish DNA sequence from clone CH211-145G9 in ... 50 0.33 1
(BX548006) Zebrafish DNA sequence from clone DKEY-127P11. 50 0.33 1
(BX544876) Zebrafish DNA sequence from clone CH211-167B20 in... 50 0.33 1
(BX537165) Zebrafish DNA sequence from clone CH211-263O4 in ... 50 0.33 1
(BX537109) Zebrafish DNA sequence from clone DKEY-86P22 in l... 50 0.33 1
(BX530058) Zebrafish DNA sequence from clone DKEYP-89D7 in l... 50 0.33 1
(BX510325) Zebrafish DNA sequence from clone CH211-149A22 in... 50 0.33 1
(BX470242) Zebrafish DNA sequence from clone CH211-195I24 in... 50 0.33 1
(BX470229) Zebrafish DNA sequence from clone DKEY-193B15 in ... 50 0.33 1
(BX470222) Zebrafish DNA sequence from clone DKEYP-120F10 in... 50 0.33 1
(BX469936) Zebrafish DNA sequence from clone DKEY-32I12 in l... 50 0.33 1
(BX465186) Zebrafish DNA sequence from clone DKEY-106M10 in ... 50 0.33 1
(BX324163) Zebrafish DNA sequence from clone DKEY-106C17 in ... 50 0.33 1
(BX323870) Zebrafish DNA sequence from clone DKEYP-70G1 in l... 50 0.33 1
(BX323015) Zebrafish DNA sequence from clone CH211-231H23 in... 50 0.33 1
(BX296551) Zebrafish DNA sequence from clone CH211-224L10 in... 50 0.33 1
(BX296546) Zebrafish DNA sequence from clone CH211-234P1 in ... 50 0.33 1
(BX294395) Zebrafish DNA sequence from clone CH211-220B11 in... 50 0.33 1
(BX294188) Zebrafish DNA sequence from clone DKEY-255G14. 50 0.33 1
(BX294122) Zebrafish DNA sequence from clone DKEYP-6A12 in l... 50 0.33 1
(BX276108) Zebrafish DNA sequence from clone CH211-265M17 in... 50 0.33 1
(BX276091) Zebrafish DNA sequence from clone CH211-267P9 in ... 50 0.33 1
(BX255929) Zebrafish DNA sequence from clone CH211-271P5 in ... 50 0.33 1
(BX248495) Zebrafish DNA sequence from clone DKEY-81I11 in l... 50 0.33 1
(BX248388) Zebrafish DNA sequence from clone CH211-239E16 in... 50 0.33 1
(BX088692) Zebrafish DNA sequence from clone CH211-208A20 in... 50 0.33 1
(BX005479) Zebrafish DNA sequence from clone DKEY-209E8 in l... 50 0.33 1
(BX005413) Zebrafish DNA sequence from clone DKEY-209E17 in ... 50 0.33 1
(BX005396) Zebrafish DNA sequence from clone CH211-128N12. 50 0.33 1
(BX005029) Zebrafish DNA sequence from clone CH211-182D3 in ... 50 0.33 1
(BX004786) Zebrafish DNA sequence from clone DKEY-1P6 in lin... 50 0.33 1
(BX001058) Zebrafish DNA sequence from clone CH211-14I21. 50 0.33 1
(BX000529) Zebrafish DNA sequence from clone DKEY-191N2 in l... 50 0.33 1
(BX000462) Zebrafish DNA sequence from clone DKEY-114F6 in l... 50 0.33 1
(AL954172) Zebrafish DNA sequence from clone CH211-220D9 in ... 50 0.33 1
(AL953861) Zebrafish DNA sequence from clone CH211-132C16 in... 50 0.33 1
(AL929522) Zebrafish DNA sequence from clone CH211-157B19 in... 50 0.33 1
(AL929274) Zebrafish DNA sequence from clone CH211-79M20 in ... 50 0.33 1
(AL928946) Zebrafish DNA sequence from clone CH211-265D20 in... 50 0.33 1
(AL928814) Zebrafish DNA sequence from clone CH211-149O12 in... 50 0.33 1
(AL845351) Zebrafish DNA sequence from clone DKEYP-44A9 in l... 50 0.33 1
(AL773598) Zebrafish DNA sequence from clone CH211-207G4. 50 0.33 1
(AL672171) Zebrafish DNA sequence from clone BUSM1-270G24 in... 50 0.33 1
(AC190267) Gallus gallus BAC clone CH261-44B21 from chromoso... 50 0.33 1
(BV431287) S237P6298RC5.T0 PortugueseWaterDog Canis familiar... 50 0.33 1
(BV211530) BARC171 Wheat var Chinese Spring Genomic DNA Trit... 50 0.33 1
(AF237395) Glycine max SSR-containing genomic clone 151A9, s... 50 0.33 1
(U31444) Mus musculus glutamate receptor subunit (GluR5) gen... 50 0.33 1
(CT030723) Mouse DNA sequence from clone RP23-33L24 on chrom... 50 0.33 1
(AL845539) Mouse DNA sequence from clone RP23-263O6 on chrom... 50 0.33 1
(AL807237) Mouse DNA sequence from clone RP23-384O9 on chrom... 50 0.33 1
(AL591417) Mouse DNA sequence from clone RP23-272C1 on chrom... 50 0.33 1
(AC154415) Mus musculus BAC clone RP24-232A21 from chromosom... 50 0.33 1
(AC125380) Mus musculus BAC clone RP23-204N23 from 1, comple... 50 0.33 1
(AC118681) Mus musculus chromosome 16, clone RP23-473M11, co... 50 0.33 1
(AC117599) Mus musculus chromosome 1, clone RP23-426D21, com... 50 0.33 1
(AC112163) Mus Musculus chromosome 13 BAC, clone MGS1-437011... 50 0.33 1
(AC193058) Rhesus Macaque BAC CH250-141D19 () complete sequ... 50 0.33 1
(AC091620) Papio anubis clone RP41-400H11, complete sequence. 50 0.33 1
(EU180847) Boechera divaricarpa clone BAC33, complete sequence. 50 0.33 1
(CU928203) M.truncatula DNA sequence from clone MTE1-43G17 o... 50 0.33 1
(CU633466) M.truncatula DNA sequence from clone MTH2-41H13 o... 50 0.33 1
(CT009488) M.truncatula DNA sequence from clone MTH2-70J8 on... 50 0.33 1
(CR956402) M.truncatula DNA sequence from clone MTH2-50J5 on... 50 0.33 1
(AY955840) Paracoccidioides brasiliensis strain Pb18 mitocho... 50 0.33 1
(AM484303) Vitis vinifera contig VV78X272517.2, whole genome... 50 0.33 1
(AM483039) Vitis vinifera contig VV78X187583.5, whole genome... 50 0.33 1
(AM467864) Vitis vinifera contig VV78X165847.11, whole genom... 50 0.33 1
(AM465875) Vitis vinifera contig VV78X103811.4, whole genome... 50 0.33 1
(AM460482) Vitis vinifera contig VV78X189368.2, whole genome... 50 0.33 1
(AM441878) Vitis vinifera contig VV78X074614.6, whole genome... 50 0.33 1
(AM433084) Vitis vinifera contig VV78X256075.11, whole genom... 50 0.33 1
(AC232550) Brassica rapa subsp. pekinensis clone KBrH011J16,... 50 0.33 1
(AC225538) Medicago truncatula clone mth2-68m14, complete se... 50 0.33 1
(AC189544) Brassica rapa subsp. pekinensis clone KBrH004I05,... 50 0.33 1
(AC165218) Medicago truncatula chromosome 2 BAC clone mth2-4... 50 0.33 1
(AC152936) Medicago truncatula clone mth2-47n14, complete se... 50 0.33 1
(AC152497) Medicago truncatula chromosome 6 clone mth2-36l14... 50 0.33 1
(AC148348) Medicago truncatula clone mth2-28b4, complete seq... 50 0.33 1
(AC146972) Medicago truncatula clone mth2-128d9, complete se... 50 0.33 1
(AC146748) Medicago truncatula clone mth2-65k8, complete seq... 50 0.33 1
(AC146631) Medicago truncatula clone mth2-7g1, complete sequ... 50 0.33 1
(AC145753) Genomic sequence for Medicago truncatula, clone M... 50 0.33 1
(AC140031) Medicago truncatula clone mth2-24d16, complete se... 50 0.33 1
(AC135101) Medicago truncatula clone mth2-18a18, complete se... 50 0.33 1
(DD010736) Diagnosis of known genetic Parameters within the ... 50 0.33 1
(CS700170) Sequence 3000 from Patent WO2006081555. 50 0.33 1
(CS012144) Sequence 2069 from Patent WO2005007144. 50 0.33 1
(BD080857) Banana proteins, DNA, and DNA regulatory elements... 50 0.33 1
(AX344566) Sequence 17 from Patent WO0200932. 50 0.33 1
(AX252458) Sequence 15 from Patent WO0168879. 50 0.33 1
(AC192780) Ornithorhynchus anatinus BAC clone OABb-473G18 fr... 50 0.33 1
(AC192436) Ornithorhynchus anatinus BAC clone OABb-484F22 fr... 50 0.33 1
(AL034557) Plasmodium falciparum MAL4P1. 50 0.33 1
(AF020287) Dictyostelium discoideum CulA (culA) mRNA, comple... 50 0.33 1
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 50 0.33 1
(AE014298) Drosophila melanogaster chromosome X, complete se... 50 0.33 1
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 50 0.33 1
(AC117073) Dictyostelium discoideum chromosome 2 map 6045872... 50 0.33 1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 50 0.33 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 50 0.33 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 50 0.33 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 50 0.33 1
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 50 0.33 1
(AC114258) Dictyostelium discoideum chromosome 2 map complem... 50 0.33 1
(EF445043) Homo sapiens zinc finger protein 521 (ZNF521) gen... 50 0.33 1
(AL160191) Human chromosome 14 DNA sequence BAC R-486O13 of ... 50 0.33 1
(AC134775) Homo sapiens chromosome 11, clone CTD-2609K8, com... 50 0.33 1
(AC105114) Homo sapiens chromosome 18, clone CTD-2576N18, co... 50 0.33 1
(AC104961) Homo sapiens chromosome 18, clone RP11-958F21, co... 50 0.33 1
(AC002554) Human Chromosome 11p11.2 PAC clone pDJ404m15, com... 50 0.33 1
(AC148641) Ornithorhynchus anatinus clone OA_Bb-464M15, WORK... 50 0.33 1
(AC147452) Ornithorhynchus anatinus clone OA_Bb-359D15, WORK... 50 0.33 1
(AC146807) Medicago truncatula clone mth2-154j21, WORKING DR... 50 0.33 1
(AC146565) Medicago truncatula clone mth2-71g17, WORKING DRA... 50 0.33 1
(AC141666) Apis mellifera clone CH224-54J12, WORKING DRAFT S... 50 0.33 1
(AC140089) Ornithorhynchus anatinus clone OA_Bb-335A2, WORKI... 50 0.33 1
(AC136029) Rattus norvegicus clone CH230-205G11, *** SEQUENC... 50 0.33 1
(AC135235) Mus musculus chromosome UNK clone RP23-7D13, WORK... 50 0.33 1
(AC124062) Homo sapiens chromosome 11 clone RP3-404M15 map 1... 50 0.33 1
(AC121033) Rattus norvegicus clone CH230-99M8, *** SEQUENCIN... 50 0.33 1
(AC114473) Mus musculus strain 129/SvJ chromosome 13 clone M... 50 0.33 1
(AC114312) Homo sapiens chromosome 5 clone RP11-300P8, WORKI... 50 0.33 1
(AC111511) Rattus norvegicus clone CH230-133O3, *** SEQUENCI... 50 0.33 1
(AC110139) Rattus norvegicus clone CH230-276G17, *** SEQUENC... 50 0.33 1
(AC095772) Rattus norvegicus clone CH230-9J20, *** SEQUENCIN... 50 0.33 1
(FP017206) Medicago truncatula chromosome 5 clone mth4-64j13... 50 0.33 1
(FP016065) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(FP016057) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(FP015811) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU929450) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU929411) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU929148) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU929090) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU856145) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU695300) Brassica rapa subsp. pekinensis clone KBrH052O11,... 50 0.33 1
(CU682601) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU681844) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU655884) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(AC067715) Mus musculus chromosome 11 clone RP23-326H14, WOR... 50 0.33 1
(CU468818) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU467648) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU467644) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CU207243) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(CU137685) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(CU104785) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CT573801) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(CT573395) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CT025902) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CT025866) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CR925734) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CR925708) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(CR853283) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CR848720) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(CR759864) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(CR749768) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(CR388034) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(BX927301) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(BX890561) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(BX469884) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.33 1
(BX322580) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.33 1
(BX119990) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 50 0.33 1
(AL844509) Plasmodium falciparum chromosome 13. 50 0.33 1
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 50 0.33 1
(AL049180) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 50 0.33 1
(AC232876) Medicago truncatula clone mth2-156b12, WORKING DR... 50 0.33 1
(AC231336) Medicago truncatula chromosome 2 clone mte1-38n5,... 50 0.33 1
(AC226289) Tachyglossus aculeatus clone TA_Ba-429K21, WORKIN... 50 0.33 1
(AC214335) Pteropus vampyrus clone CH279-420B14, WORKING DRA... 50 0.33 1
(AC209518) Solanum tuberosum chromosome 2 clone RHPOTKEY060O... 50 0.33 1
(AC207565) Zea mays chromosome 2 clone CH201-274O16; ZMMBBc0... 50 0.33 1
(AC202352) Medicago truncatula clone mth2-45d6, WORKING DRAF... 50 0.33 1

>(BJ377943) Dictyostelium discoideum cDNA clone:ddc26c14, 3' end,
single read.
Length = 665

Score = 1263 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Minus


Query: 130 ataaccaattcccgtacattgatggtagacgacacaatgaacgtatcggacattgtaaag 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ataaccaattcccgtacattgatggtagacgacacaatgaacgtatcggacattgtaaag 606


Query: 190 tatgtctctacacaggtgcccatctcaagtgcaatcgatagggagcaatacgaccaaatg 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tatgtctctacacaggtgcccatctcaagtgcaatcgatagggagcaatacgaccaaatg 546


Query: 250 aacatgtatgaggttgaggagttgtccaacgatatgaccgtcagggagcagggttacgtt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aacatgtatgaggttgaggagttgtccaacgatatgaccgtcagggagcagggttacgtt 486


Query: 310 ggcgaatgcaccaccaatcttttacgtggcgccaagggtgatcttggcctttgcgtgcaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ggcgaatgcaccaccaatcttttacgtggcgccaagggtgatcttggcctttgcgtgcaa 426


Query: 370 gttccttatttcgagggtttcatcatgagaaagaggggtggtggtttgatcaagggttta 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gttccttatttcgagggtttcatcatgagaaagaggggtggtggtttgatcaagggttta 366


Query: 430 aagaattggaacaaacgttggtacagtcttagaaagaataaattactctactttaaatca 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aagaattggaacaaacgttggtacagtcttagaaagaataaattactctactttaaatca 306


Query: 490 aaatccgattcaacagagatgggttgtatcttgatgaaaacagttcaaacagttagacct 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aaatccgattcaacagagatgggttgtatcttgatgaaaacagttcaaacagttagacct 246


Query: 550 tgtacagaggttgccgatataccatcgaaatattcaaagatgtgctttgaaatcgttaca 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgtacagaggttgccgatataccatcgaaatattcaaagatgtgctttgaaatcgttaca 186


Query: 610 cccgctagaacatttgtaatgttggcaaataatgtttctgatatgaagaaatgggtagag 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cccgctagaacatttgtaatgttggcaaataatgtttctgatatgaagaaatgggtagag 126


Query: 670 atattggaatcatctcgtagaatgtttgcttatgaaactcactttttcggtgtcgccagt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atattggaatcatctcgtagaatgtttgcttatgaaactcactttttcggtgtcgccagt 66


Query: 730 aaaaagatatcagaaggtggtggtggttcattcatca 766
|||||||||||||||||||||||||||||||||||||
Sbjct: 65 aaaaagatatcagaaggtggtggtggttcattcatca 29

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,398,859,122
Number of extensions: 92660669
Number of successful extensions: 12479615
Number of sequences better than 10.0: 7290
Length of query: 2031
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 2007
Effective length of database: 96,409,374,237
Effective search space: 193493614093659
Effective search space used: 193493614093659
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15647-1 (Contig-U15647-1Q) /CSM_Contig/Contig-U15647-1Q.Seq.d
(2031 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AK222401_1(AK222401|pid:none) Ciona intestinalis mRNA for zinc f... 55 7e-06
AB209407_1(AB209407|pid:none) Homo sapiens mRNA for pleckstrin h... 53 5e-05
BX664700_3(BX664700|pid:none) Human DNA sequence from clone WI2-... 53 5e-05
AF286160_1(AF286160|pid:none) Homo sapiens Tandem PH Domain Cont... 53 5e-05
AK075159_1(AK075159|pid:none) Homo sapiens cDNA FLJ90678 fis, cl... 53 5e-05
BC122736_1(BC122736|pid:none) Bos taurus pleckstrin homology dom... 53 5e-05
CR860022_1(CR860022|pid:none) Pongo abelii mRNA; cDNA DKFZp459M1... 53 5e-05
AK314660_1(AK314660|pid:none) Homo sapiens cDNA, FLJ95507, highl... 53 5e-05
BC128752_1(BC128752|pid:none) Rattus norvegicus pleckstrin homol... 53 5e-05
BT045566_1(BT045566|pid:none) Salmo salar clone ssal-rgf-525-017... 52 6e-05
BC024692_1(BC024692|pid:none) Mus musculus myosin X, mRNA (cDNA ... 52 6e-05
BC156151_1(BC156151|pid:none) Synthetic construct Mus musculus c... 52 6e-05
AK122371_1(AK122371|pid:none) Mus musculus mRNA for mKIAA0799 pr... 52 6e-05
A59297(A59297) myosin X - mouse &AJ249706_1(AJ249706|pid:none) 52 6e-05
BC129036_1(BC129036|pid:none) Danio rerio zgc:153917, mRNA (cDNA... 52 6e-05
AC116986_113(AC116986|pid:none) Dictyostelium discoideum chromos... 52 6e-05
BX005083_7(BX005083|pid:none) Zebrafish DNA sequence from clone ... 52 1e-04
(Q9HD67) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 51 1e-04
AF132021_1(AF132021|pid:none) Homo sapiens myosin X (MYO10) mRNA... 51 1e-04
AK316138_1(AK316138|pid:none) Homo sapiens cDNA, FLJ79037 comple... 51 1e-04
AL832428_1(AL832428|pid:none) Homo sapiens mRNA; cDNA DKFZp762A0... 51 1e-04
AX405628_1(AX405628|pid:none) Sequence 43 from Patent WO0222660. 51 1e-04
AB018342_1(AB018342|pid:none) Homo sapiens mRNA for KIAA0799 pro... 51 1e-04
AK074717_1(AK074717|pid:none) Homo sapiens cDNA FLJ90236 fis, cl... 51 1e-04
(P79114) RecName: Full=Myosin-X; AltName: Full=Unconventional my... 51 1e-04
AJ720581_1(AJ720581|pid:none) Gallus gallus mRNA for hypothetica... 51 2e-04
BX571973_2(BX571973|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
(Q5FVC7) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 50 2e-04
AB118104_1(AB118104|pid:none) Entamoeba histolytica gene for hyp... 50 2e-04
AK147319_1(AK147319|pid:none) Mus musculus cDNA, RIKEN full-leng... 50 2e-04
AK169897_1(AK169897|pid:none) Mus musculus NOD-derived CD11c +ve... 50 3e-04
AK137444_1(AK137444|pid:none) Mus musculus adult male bone cDNA,... 50 3e-04
BC076776_1(BC076776|pid:none) Xenopus laevis pleckstrin homology... 50 4e-04
AK290396_1(AK290396|pid:none) Homo sapiens cDNA FLJ78435 complet... 50 4e-04
AC117176_43(AC117176|pid:none) Dictyostelium discoideum chromoso... 50 4e-04
D29642_1(D29642|pid:none) Homo sapiens KIAA0053 mRNA, partial cds. 50 4e-04
AB383728_1(AB383728|pid:none) Synthetic construct DNA, clone: pF... 50 4e-04
BC060484_1(BC060484|pid:none) Xenopus laevis hypothetical protei... 50 4e-04
AK298669_1(AK298669|pid:none) Homo sapiens cDNA FLJ61332 complet... 50 4e-04
AK303591_1(AK303591|pid:none) Homo sapiens cDNA FLJ59112 complet... 50 4e-04
(Q5ZK62) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 49 5e-04
(Q6IVG4) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 49 5e-04
(Q15057) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 49 5e-04
BC105510_1(BC105510|pid:none) Bos taurus Rho GTPase activating p... 49 5e-04
AK295630_1(AK295630|pid:none) Homo sapiens cDNA FLJ58530 complet... 49 5e-04
BC060767_1(BC060767|pid:none) Homo sapiens ArfGAP with coiled-co... 49 5e-04
BC140572_1(BC140572|pid:none) Bos taurus RAS p21 protein activat... 49 7e-04
(Q28013) RecName: Full=Ras GTPase-activating protein 3; AltName:... 49 7e-04
BC077473_1(BC077473|pid:none) Xenopus laevis RAS p21 protein act... 49 7e-04
BC093150_1(BC093150|pid:none) Danio rerio dual adaptor of phosph... 49 0.001
AK147505_1(AK147505|pid:none) Mus musculus cDNA, RIKEN full-leng... 49 0.001
CU467619_1(CU467619|pid:none) Zebrafish DNA sequence from clone ... 49 0.001
CR382295_2(CR382295|pid:none) Zebrafish DNA sequence from clone ... 49 0.001
AL670236_22(AL670236|pid:none) Mouse DNA sequence from clone RP2... 49 0.001
BT050178_1(BT050178|pid:none) Salmo salar clone ssal-eve-519-310... 49 0.001
BT059190_1(BT059190|pid:none) Salmo salar clone ssal-rgf-531-199... 48 0.002
BT045613_1(BT045613|pid:none) Salmo salar clone ssal-rgf-526-208... 48 0.002
AL162741_22(AL162741|pid:none) Human DNA sequence from clone RP5... 47 0.002
BC133093_1(BC133093|pid:none) Danio rerio cDNA clone MGC:158388 ... 47 0.002
(Q15027) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 47 0.002
AB051503_1(AB051503|pid:none) Homo sapiens mRNA for KIAA1716 pro... 47 0.002
AK046097_1(AK046097|pid:none) Mus musculus adult male corpora qu... 47 0.002
AB384270_1(AB384270|pid:none) Synthetic construct DNA, clone: pF... 47 0.002
(Q96P50) RecName: Full=ArfGAP with coiled-coil, ANK repeat and P... 47 0.002
(Q8BL80) RecName: Full=Rho GTPase-activating protein 22; AltName... 47 0.002
(Q7SYB5) RecName: Full=Differentially expressed in FDCP 6 homolo... 47 0.002
AK294913_1(AK294913|pid:none) Homo sapiens cDNA FLJ58396 complet... 47 0.003
(Q14644) RecName: Full=Ras GTPase-activating protein 3; AltName:... 47 0.003
CR847826_1(CR847826|pid:none) Zebrafish DNA sequence from clone ... 47 0.003
AK154449_1(AK154449|pid:none) Mus musculus NOD-derived CD11c +ve... 47 0.003
DQ829778_1(DQ829778|pid:none) Branchiostoma belcheri tsingtaunes... 47 0.003
BC073417_1(BC073417|pid:none) Xenopus laevis MGC80883 protein, m... 47 0.003
AL845465_8(AL845465|pid:none) Mouse DNA sequence from clone RP23... 47 0.003
CR548612_294(CR548612|pid:none) Paramecium tetraurelia macronucl... 46 0.005
BC167382_1(BC167382|pid:none) Xenopus tropicalis hypothetical pr... 46 0.006
BC142337_1(BC142337|pid:none) Bos taurus differentially expresse... 45 0.010
AL023828_27(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 45 0.010
BC089655_1(BC089655|pid:none) Xenopus tropicalis dual adaptor of... 45 0.010
AK075768_1(AK075768|pid:none) Mus musculus adult male testis cDN... 45 0.010
AK042324_1(AK042324|pid:none) Mus musculus 3 days neonate thymus... 45 0.010
AL023828_28(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 45 0.010
(Q00IB7) RecName: Full=Pleckstrin homology domain-containing fam... 45 0.010
T26508(T26508)hypothetical protein Y17G7B.15 - Caenorhabditis el... 45 0.010
(Q9QYJ2) RecName: Full=Ras GTPase-activating protein 3; AltName:... 45 0.010
BT075159_1(BT075159|pid:none) Osmerus mordax clone omor-eva-516-... 45 0.010
(Q60790) RecName: Full=Ras GTPase-activating protein 3; AltName:... 45 0.010
CR858155_1(CR858155|pid:none) Pongo abelii mRNA; cDNA DKFZp469G0... 45 0.013
(Q3ZBA3) RecName: Full=Pleckstrin homology domain-containing fam... 45 0.013
AF302149_1(AF302149|pid:none) Gallus gallus tandem PH domain-con... 45 0.013
AK291842_1(AK291842|pid:none) Homo sapiens cDNA FLJ75843 complet... 45 0.013
(Q9ST43) RecName: Full=Pleckstrin homology domain-containing pro... 44 0.017
AK169584_1(AK169584|pid:none) Mus musculus 2 days neonate thymus... 44 0.017
BT071749_1(BT071749|pid:none) Picea sitchensis clone WS0451_O16 ... 44 0.017
BT071037_1(BT071037|pid:none) Picea sitchensis clone WS02766_P14... 44 0.017
AB005903_1(AB005903|pid:none) Arabidopsis thaliana AtPH1 mRNA, c... 44 0.017
AK145745_1(AK145745|pid:none) Mus musculus blastocyst blastocyst... 44 0.017
AF163255_1(AF163255|pid:none) Mus musculus adaptor protein DAPP1... 44 0.017
(Q9UN19) RecName: Full=Dual adapter for phosphotyrosine and 3-ph... 44 0.022
BC123550_1(BC123550|pid:none) Bos taurus dual adaptor of phospho... 44 0.022
AK147896_1(AK147896|pid:none) Mus musculus melanocyte cDNA, RIKE... 44 0.022
FN357510_2(FN357510|pid:none) Schistosoma mansoni genome sequenc... 44 0.022
AK295896_1(AK295896|pid:none) Homo sapiens cDNA FLJ56902 complet... 44 0.022
(Q7Z5H3) RecName: Full=Rho GTPase-activating protein 22; AltName... 44 0.029
AK293579_1(AK293579|pid:none) Homo sapiens cDNA FLJ56006 complet... 44 0.029
BC017504_1(BC017504|pid:none) Homo sapiens cDNA clone MGC:23250 ... 43 0.038
AK314756_1(AK314756|pid:none) Homo sapiens cDNA, FLJ95623, highl... 43 0.038
AY241694_1(AY241694|pid:none) Homo sapiens IRF4-binding protein ... 43 0.038
AK072489_1(AK072489|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.050
(Q8N4B1) RecName: Full=Protein FAM109A; &BC034809_1(BC034809|pi... 43 0.050
AK289546_1(AK289546|pid:none) Homo sapiens cDNA FLJ77448 complet... 43 0.050
(Q64398) RecName: Full=Diacylglycerol kinase eta; Short... 43 0.050
(Q86XP1) RecName: Full=Diacylglycerol kinase eta; Short... 43 0.050
AL929161_1(AL929161|pid:none) Zebrafish DNA sequence from clone ... 43 0.050
AY241695_1(AY241695|pid:none) Mus musculus IRF4-binding protein ... 43 0.050
AB078967_1(AB078967|pid:none) Homo sapiens DGKH-1 mRNA for diacy... 43 0.050
AC135421_4(AC135421|pid:none) Oryza sativa (japonica cultivar-gr... 42 0.065
AK173337_1(AK173337|pid:none) Mus musculus premature mRNA for mK... 42 0.065
BC088682_1(BC088682|pid:none) Xenopus laevis hypothetical LOC496... 42 0.065
AK029252_1(AK029252|pid:none) Mus musculus 0 day neonate head cD... 42 0.065
BC125583_1(BC125583|pid:none) Mus musculus pleckstrin homology d... 42 0.065
AC115592_30(AC115592|pid:none) Dictyostelium discoideum chromoso... 42 0.085
BT088093_1(BT088093|pid:none) Zea mays full-length cDNA clone ZM... 42 0.085
BT026166_1(BT026166|pid:none) Bos taurus Rho GTPase activating p... 42 0.085
EF563993_1(EF563993|pid:none) Phytophthora infestans cellulose s... 42 0.085
AM472375_2(AM472375|pid:none) Vitis vinifera contig VV78X002492.... 42 0.085
(Q5U2Z7) RecName: Full=Rho GTPase-activating protein 24; AltName... 42 0.085
AK299344_1(AK299344|pid:none) Homo sapiens cDNA FLJ61356 complet... 42 0.085
AC116960_51(AC116960|pid:none) Dictyostelium discoideum chromoso... 42 0.11
AB095948_1(AB095948|pid:none) Homo sapiens mRNA for KIAA2028 pro... 42 0.11
(Q8IVE3) RecName: Full=Pleckstrin homology domain-containing fam... 42 0.11
AL833400_1(AL833400|pid:none) Homo sapiens mRNA; cDNA DKFZp313A1... 42 0.11
AY128672_1(AY128672|pid:none) Drosophila pseudoobscura daughter ... 42 0.11
AE014298_127(AE014298|pid:none) Drosophila melanogaster chromoso... 41 0.15
FJ172672_1(FJ172672|pid:none) Marsupenaeus japonicus centaurin-a... 41 0.15
(Q9W5D0) RecName: Full=Uncharacterized protein CG42248; 41 0.15
(Q5PQS3) RecName: Full=Ventricular zone-expressed PH domain-cont... 41 0.15
AK296068_1(AK296068|pid:none) Homo sapiens cDNA FLJ51480 complet... 41 0.19
AE014297_1815(AE014297|pid:none) Drosophila melanogaster chromos... 41 0.19
BC047918_1(BC047918|pid:none) Homo sapiens Rho GTPase activating... 41 0.19
(Q8N264) RecName: Full=Rho GTPase-activating protein 24; AltName... 41 0.19
AK091196_1(AK091196|pid:none) Homo sapiens cDNA FLJ33877 fis, cl... 41 0.19
AE014297_1813(AE014297|pid:none) Drosophila melanogaster chromos... 41 0.19
EF145537_1(EF145537|pid:none) Populus trichocarpa clone WS01125_... 41 0.19
AK297056_1(AK297056|pid:none) Homo sapiens cDNA FLJ51694 complet... 40 0.25
EU386161_1(EU386161|pid:none) Rhodosporidium toruloides p21-acti... 40 0.25
AL832207_1(AL832207|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 40 0.25
BC077879_1(BC077879|pid:none) Xenopus laevis MGC80649 protein, m... 40 0.25
AK050079_1(AK050079|pid:none) Mus musculus adult male liver tumo... 40 0.25
U51013_1(U51013|pid:none) Rattus norvegicus centaurin alpha mRNA... 40 0.32
(Q8VC98) RecName: Full=Pleckstrin homology domain-containing fam... 40 0.32
(Q9UUE2) RecName: Full=Protein csx2; &AL109846_8(AL109846|pid:n... 40 0.32
EF563994_1(EF563994|pid:none) Phytophthora infestans cellulose s... 40 0.42
AF277804_1(AF277804|pid:none) Dictyostelium discoideum PakC mRNA... 40 0.42
AE014297_3405(AE014297|pid:none) Drosophila melanogaster chromos... 40 0.42
BC146071_1(BC146071|pid:none) Bos taurus SWAP-70 protein, mRNA (... 40 0.42
(Q6P3Q6) RecName: Full=Collagen type IV alpha-3-binding protein;... 40 0.42
EF564002_1(EF564002|pid:none) Phytophthora ramorum cellulose syn... 40 0.42
(Q55GV3) RecName: Full=Serine/threonine-protein kinase pakC; ... 40 0.42
AK096859_1(AK096859|pid:none) Homo sapiens cDNA FLJ39540 fis, cl... 39 0.55
AK038061_1(AK038061|pid:none) Mus musculus 16 days neonate thymu... 39 0.55
CR392038_2(CR392038|pid:none) Zebrafish DNA sequence from clone ... 39 0.55
(Q9UH65) RecName: Full=Switch-associated protein 70; Sh... 39 0.55
AK030305_1(AK030305|pid:none) Mus musculus 11 days pregnant adul... 39 0.55
CQ855936_1(CQ855936|pid:none) Sequence 95 from Patent WO20040700... 39 0.55
BC167450_1(BC167450|pid:none) Danio rerio pleckstrin 2, mRNA (cD... 39 0.55
AK047100_1(AK047100|pid:none) Mus musculus 10 days neonate cereb... 39 0.55
AK080958_1(AK080958|pid:none) Mus musculus 4 days neonate male a... 39 0.55
(Q9NPF8) RecName: Full=Arf-GAP with dual PH domain-containing pr... 39 0.55
BC033758_1(BC033758|pid:none) Homo sapiens ArfGAP with dual PH d... 39 0.55
AK163624_1(AK163624|pid:none) Mus musculus 4 days neonate male a... 39 0.55
CQ855934_1(CQ855934|pid:none) Sequence 93 from Patent WO20040700... 39 0.55
AJ242782_1(AJ242782|pid:none) Homo sapiens mRNA for centaurin be... 39 0.55
AK304104_1(AK304104|pid:none) Homo sapiens cDNA FLJ61538 complet... 39 0.55
(Q9EQG9) RecName: Full=Collagen type IV alpha-3-binding protein;... 39 0.55
BC064601_1(BC064601|pid:none) Homo sapiens pleckstrin homology d... 39 0.55
AF232934_1(AF232934|pid:none) Mus musculus Goodpasture antigen-b... 39 0.55
AB383933_1(AB383933|pid:none) Synthetic construct DNA, clone: pF... 39 0.55
AK342598_1(AK342598|pid:none) Acyrthosiphon pisum ACYPI004941 mR... 39 0.72
CQ855866_1(CQ855866|pid:none) Sequence 25 from Patent WO20040700... 39 0.72
AF232933_1(AF232933|pid:none) Bos taurus Goodpasture antigen-bin... 39 0.72
AF123047_1(AF123047|pid:none) Rattus norvegicus centaurin/PIP3-b... 39 0.72
AY323814_1(AY323814|pid:none) Cricetulus griseus lipid-transfer ... 39 0.72
BC064211_1(BC064211|pid:none) Xenopus tropicalis Centaurin-alpha... 39 0.72
CQ855852_1(CQ855852|pid:none) Sequence 11 from Patent WO20040700... 39 0.72
CQ855854_1(CQ855854|pid:none) Sequence 13 from Patent WO20040700... 39 0.72
(Q6VVX2) RecName: Full=Collagen type IV alpha-3-binding protein;... 39 0.72
S71847(S71847)Ins P4-binding protein - human 39 0.72
CQ855938_1(CQ855938|pid:none) Sequence 97 from Patent WO20040700... 39 0.72
AK172990_1(AK172990|pid:none) Mus musculus mRNA for mKIAA0640 pr... 39 0.72
CQ855860_1(CQ855860|pid:none) Sequence 19 from Patent WO20040700... 39 0.72
(Q5R6M6) RecName: Full=Collagen type IV alpha-3-binding protein;... 39 0.72
AF232930_1(AF232930|pid:none) Homo sapiens Goodpasture antigen-b... 39 0.72
CQ855864_1(CQ855864|pid:none) Sequence 23 from Patent WO20040700... 39 0.72
(Q9Y5P4) RecName: Full=Collagen type IV alpha-3-binding protein;... 39 0.72
AK076768_1(AK076768|pid:none) Mus musculus adult male testis cDN... 39 0.72
BC144874_1(BC144874|pid:none) Mus musculus ArfGAP with dual PH d... 39 0.72
CQ855850_1(CQ855850|pid:none) Sequence 9 from Patent WO2004070025. 39 0.72
CQ855846_1(CQ855846|pid:none) Sequence 5 from Patent WO2004070025. 39 0.72
S58888(S58888)Ins P4-binding protein - human 39 0.72
D78155_1(D78155|pid:none) Homo sapiens mRNA for rasGTPase activa... 39 0.94
AB385228_1(AB385228|pid:none) Synthetic construct DNA, clone: pF... 39 0.94
AK290517_1(AK290517|pid:none) Homo sapiens cDNA FLJ77789 complet... 39 0.94
AK292016_1(AK292016|pid:none) Homo sapiens cDNA FLJ76675 complet... 39 0.94
AK300859_1(AK300859|pid:none) Homo sapiens cDNA FLJ54168 complet... 39 0.94
(O75689) RecName: Full=Arf-GAP with dual PH domain-containing pr... 39 0.94
AK092471_1(AK092471|pid:none) Homo sapiens cDNA FLJ35152 fis, cl... 39 0.94
EU025708_9(EU025708|pid:none) Salmo salar EAP30 subunit of ELL c... 38 1.2
(P38041) RecName: Full=Protein BOB1; AltName: Full=BEM1-binding ... 38 1.2
AC116963_26(AC116963|pid:none) Dictyostelium discoideum chromoso... 38 1.2
AE014134_3648(AE014134|pid:none) Drosophila melanogaster chromos... 36 1.3
AE014134_3647(AE014134|pid:none) Drosophila melanogaster chromos... 36 1.3
BC103524_1(BC103524|pid:none) Mus musculus growth factor recepto... 38 1.6
AF000195_7(AF000195|pid:none) Caenorhabditis elegans cosmid C32F... 38 1.6
EU386160_1(EU386160|pid:none) Rhodosporidium toruloides p21-acti... 38 1.6
BC103525_1(BC103525|pid:none) Mus musculus growth factor recepto... 38 1.6
BC084161_1(BC084161|pid:none) Xenopus laevis hypothetical LOC495... 38 1.6
BC103527_1(BC103527|pid:none) Mus musculus growth factor recepto... 38 1.6
AY128671_1(AY128671|pid:none) Drosophila virilis daughter of sev... 38 1.6
AF104244_1(AF104244|pid:none) Mus musculus PH domain containing ... 38 1.6
BC059321_1(BC059321|pid:none) Xenopus laevis hypothetical protei... 38 1.6
BC115308_1(BC115308|pid:none) Danio rerio si:dkey-8l13.4, mRNA (... 37 2.1
CU104724_2(CU104724|pid:none) Zebrafish DNA sequence from clone ... 37 2.1
BX005395_4(BX005395|pid:none) Zebrafish DNA sequence from clone ... 37 2.1
(Q9JK15) RecName: Full=Arf-GAP with dual PH domain-containing pr... 37 2.1
BT080786_1(BT080786|pid:none) Caligus clemensi clone ccle-evs-51... 37 2.7
(Q9H9Q7) RecName: Full=Ventricular zone-expressed PH domain-cont... 37 2.7
AC117072_36(AC117072|pid:none) Dictyostelium discoideum chromoso... 37 2.7
BC097996_1(BC097996|pid:none) Rattus norvegicus cDNA clone IMAGE... 37 2.7
BX001030_7(BX001030|pid:none) Zebrafish DNA sequence from clone ... 37 2.7
BC111017_1(BC111017|pid:none) Homo sapiens ventricular zone expr... 37 2.7
(B4R0A5) RecName: Full=Diacylglycerol kinase eta; Short... 37 2.7
BT080347_1(BT080347|pid:none) Caligus clemensi clone ccle-evs-50... 37 2.7
AB085188_1(AB085188|pid:none) Danio rerio zVeph-A mRNA, complete... 37 2.7
(B4I4Y1) RecName: Full=Diacylglycerol kinase eta; Short... 37 2.7
(Q9VZZ9) RecName: Full=Protein daughter of sevenless; &AE014296... 37 2.7
AB051479_1(AB051479|pid:none) Homo sapiens mRNA for KIAA1692 pro... 37 2.7
(A8JQ65) RecName: Full=Diacylglycerol kinase eta; Short... 37 2.7
(A1A535) RecName: Full=Ventricular zone-expressed PH domain-cont... 37 2.7
X97447_1(X97447|pid:none) D.melanogaster mRNA for PH domain prot... 37 2.7
AK022666_1(AK022666|pid:none) Homo sapiens cDNA FLJ12604 fis, cl... 37 2.7
CR382137_946(CR382137|pid:none) Debaryomyces hansenii strain CBS... 37 2.7
AY616187_1(AY616187|pid:none) Ustilago maydis p21-activated kina... 37 3.6
(Q63713) RecName: Full=Ras GTPase-activating protein 2; AltName:... 37 3.6
BX640463_1(BX640463|pid:none) Zebrafish DNA sequence from clone ... 37 3.6
U78755_1(U78755|pid:none) Dictyostelium discoideum SecG (secG) m... 37 3.6
(Q54KA7) RecName: Full=Ankyrin repeat, PH and SEC7 domain contai... 37 3.6
(Q9UQC2) RecName: Full=GRB2-associated-binding protein 2; AltNam... 36 4.7
AB011143_1(AB011143|pid:none) Homo sapiens mRNA for KIAA0571 pro... 36 4.7
BC089739_1(BC089739|pid:none) Xenopus tropicalis src kinase asso... 36 4.7
AB005237_11(AB005237|pid:none) Arabidopsis thaliana genomic DNA,... 36 4.7
AK027625_1(AK027625|pid:none) Homo sapiens cDNA FLJ14719 fis, cl... 36 4.7
U88368_1(U88368|pid:none) Sus scrofa inositol(1,3,4,5)tetrakisph... 36 6.1
CP001358_1188(CP001358|pid:none) Desulfovibrio desulfuricans sub... 36 6.1
BC155854_1(BC155854|pid:none) Danio rerio si:ch211-239h19.1, mRN... 36 6.1
(P58069) RecName: Full=Ras GTPase-activating protein 2; AltName:... 36 6.1
AL445564_27(AL445564|pid:none) Mycoplasma pulmonis (strain UAB C... 36 6.1
AL596062_4(AL596062|pid:none) Mouse DNA sequence from clone RP23... 36 6.1
AK138030_1(AK138030|pid:none) Mus musculus 16 days neonate thymu... 36 6.1
(Q8N556) RecName: Full=Actin filament-associated protein 1; AltN... 35 8.0
AK160383_1(AK160383|pid:none) Homo sapiens mRNA for FLJ00357 pro... 35 8.0
AK290807_1(AK290807|pid:none) Homo sapiens cDNA FLJ75286 complet... 35 8.0
(Q96P48) RecName: Full=Arf-GAP, Rho-GAP domain, ANK repeat and P... 35 8.0
AB209676_1(AB209676|pid:none) Homo sapiens mRNA for actin filame... 35 8.0
(O13818) RecName: Full=Uncharacterized PH domain-containing prot... 35 8.0
AB383990_1(AB383990|pid:none) Synthetic construct DNA, clone: pF... 35 8.0
AJ721105_1(AJ721105|pid:none) Gallus gallus mRNA for hypothetica... 35 8.0
BC140792_1(BC140792|pid:none) Homo sapiens ArfGAP with RhoGAP do... 35 8.0
AB384067_1(AB384067|pid:none) Synthetic construct DNA, clone: pF... 35 8.0
(Q9Y2H5) RecName: Full=Pleckstrin homology domain-containing fam... 35 8.0
AF188700_1(AF188700|pid:none) Homo sapiens actin filament associ... 35 8.0
AB209473_1(AB209473|pid:none) Homo sapiens mRNA for centaurin de... 35 8.0
BC144562_1(BC144562|pid:none) Homo sapiens ArfGAP with RhoGAP do... 35 8.0
AF411983_1(AF411983|pid:none) Homo sapiens centaurin delta2 mRNA... 35 8.0

>AK222401_1(AK222401|pid:none) Ciona intestinalis mRNA for zinc
finger protein, complete cds, clone: cieg088c13.
Length = 868

Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1

Query: 436 WNKRWYSLRKNKLLYFKSKSDSTEMGCILMKTVQTVRPCTEVADIPSKYSKMCFEIVTPA 615
WN+RW++++ NKL Y K K D T + V +R CT V + CFE+V P
Sbjct: 280 WNRRWFTIKDNKLFYQKKKDDLTVV-------VDDIRLCT-VRLTEETERRFCFEVVLPG 331

Query: 616 RTFVMLANNVSDMKKWVEILESS 684
++F++ A + W++ ++SS
Sbjct: 332 KSFLLQAESDDARTAWIKAIQSS 354

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,837,044,827
Number of extensions: 31756474
Number of successful extensions: 77610
Number of sequences better than 10.0: 273
Number of HSP's gapped: 77389
Number of HSP's successfully gapped: 289
Length of query: 677
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 541
Effective length of database: 611,008,840
Effective search space: 330555782440
Effective search space used: 330555782440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.70 gvh: 0.44 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.31 mip: 0.04
nuc: 0.12 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
36.0 %: cytoplasmic
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: Golgi

>> prediction for Contig-U15647-1 is nuc

VS (DIR, S) 5
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 3
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0