Contig-U15642-1
Contig ID Contig-U15642-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15642-1 (Contig-U15642-1Q) /CSM_Contig/Contig-U15642-1Q.Seq.d
ACTGTTGGCCTACTGGAAAAAACAAAAATTATATAATCAACAATAAAATA
ATACCAAATTAAATTACAATAAATAATAAAAAAAAAAATATGTTAGATTT
TTTCCATTTAAAAGACGTAGATGAATTTTTTAGACTTTTGGAAAAGAAGA
ATTTACAAAACCTAGATAACCAGATTGATGGACCAGGAAACCTCAATTGG
AGAACCACTTATACAGAAAAAGATTTTTCCAAAGTTCCTAAATTCAGGGG
TATCATTCATATCGTGCAAATTAGAGATTTAGGAACAAAGATTCATAGAG
ATCTATTGTATGAAATAATGTTTGAAAAACTATTAGATATTGCTAGATTA
AATAATGAATCAAAACTTTTAAAAAAAATGAAATTCAAGATTTGAAAACA
AAACTCGACGAATATCACAACAATAATAGCACCACCAATACAGACTTAAT
AATCAATAGTTTTATCAATGTCATAGACACCACTACTACTACTACTACCA
CTAAGACAACAATGGGAGCTACTAGTATTGATAAAAAACAAAGTGAAGGT
GATTCCATTGATAAATCTATTGAACTCGATTTTTTTAAAATAAAAAGTGA
CCAATCCCAACAATCATCACCATCACACAAACTAGAAGAAAAACAAAATC
AAGTGAATAATATTACCAATGAGATTCCACAAGAATCAATAAAAACTGTA
AAACAGCAAACTCAAACAGAGACTAATCAACAAACATTTTCATCAACTTC
ACCTTCACATCAAAATGAAGAGAAACAAGATAAACAAGAAGAGGTTAAAC
AAGAAGAGGTTAAACAAAAAGAAGGTATACAAAAAGAAGATAAAAAAGAA
GAAGATAAAAAAGAAGAAGGTAACCAAAAATATGGTGAAATTTTTATTAT
TGAAATTCCCCAAGAAGAAGATAACCAAAAAGAAGATAAAAAAGAAGAAG
ATAAGAAAGAAGATAAACAAGAAGAAGATAACCAAAAAGAAGAAAAACTA
GAAGATAAACAAAAAAATGGTGAAGAATTTATTATTGAAATTCCACAAAA
TGAAACTTTAGAAATTAAAGTTGATACACACCCAAGGTCTTCCAATGATG
ATGTATCTACTGCAGAGATGGAAGTTGAAGCATTGAAAACACCATTGTTT
GCTGAAACTACATTTGTAACAAAACAACAAGTAATCACAAATAAAAAGCT
ATTGGTGTACAAACAAAGTGATTTCTTTCCAAATATGACAACATTATTAC
AAAGTAGATTGAAAGATGTAACAGTCCAAGAAGTAAAAGACCCTACTAAA
ATTGGGTTAAATGATAATAGCTATAGTGTAGGTGATTTTGAAAATGTTTT
TGTATTATATGCTGTCTCTTGTATGGGTGCTAGAACTGATTCCGAAAGAG
ATGCTTTCAAAATTAAATCAATTCGTTCAATAATTGGTGACAAAGTTCCA
ATCATCTATGGTGTATTTATGATTGGAAAGAATGGACCAACTAGAATTAA
AGTTGAACATACTCAAACCTCTATCTCAATCACTCATTCAATGAGTGATA
TCGGTCGTAATTTACAAAATAATGAAAATTTAAAACAACTACAATCATTT
TTACAACAATAAATATTAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGT
GCTCGAGCTGCAGGTCGCGGCCGCTAGACTAGTCTAGAGAAAAAACCTCC
CACACCTCCCCCTGAACCTGAAACATAAAATGAATGCAATTGTTGTTGTT
AACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCAC
AAATTTCACAAATAAAGCATTTTTTTCACTGCATTCTAGTTGTGGTTTGT
CCAAACTCATCAATGTATCTTATCATGTCTGGATCCCCGGGTACCGAGCT
CGAATTAATTCCTCTTATCAATTCGTTCAATAATTGGTGACAAAGTTCCA
ATCATCTATGGTGTATTTATGATTGGAAAGAATGGACCAACTAGAATTAA
AGTTGAACATACTCAAACCTCTATCTCAATCACTCATTCAATGAGTGATA
TCGGTCGTAATTTACAAAATAATGAAAATTTAAAACAACTACAATCATTT
TTACAACAATAAATATTAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGT
GCTCGAGCTGCAGGTCGCGGCCGCTAGACTAGTCTAGAGAAAAAACCTCC
CACACCTCCCCCTGAACCTGAAACATAAAATGAATGCAATTGTTGTTGTT
AACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCAC
AAATTTCACAAATAAAGCATTTTTTTCACTGCATTCTAGTTGTGGTTTGT
CCAAACTCATCAATGTATCTTATCATGTCTGGATCCCCGGGTACCGAGCT
CGAATTAATTCCTCTT----------CTTTNNNNNTTNNNGTTNNTNCNC
NCCCNNGGTCTTCCNNTGNTNATGTNTCTNCTGCNNNGATGGNAGTTGNA
GCNTTGNNNNCNCCNTTGTTTGCTGNCNCTNCNTTTGTNNCNNNNCNNCN
AGTAATCNCNAATANNNAGCTATTGGTGTNCNCNCANAGTGATTTCTTTC
C

Gap gap included
Contig length 2591
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 3067245
End point 3064876
Strand (PLUS/MINUS) MINUS
Number of clones 18
Number of EST 26
Link to clone list U15642
List of clone(s)

est1=AFH773F,1,540
est2=AFK492F,33,541
est3=SFF805F,33,652
est4=SSH135F,35,434
est5=SSJ154F,35,542
est6=AFB290F,39,335
est7=CHD715F,39,255
est8=AFG134F,40,594
est9=AFJ820F,42,541
est10=SSH140E,47,877
est11=AFB606F,343,869
est12=AFK243F,346,988
est13=SSD636Z,414,924
est14=SSJ153Z,487,1021
est15=AFK553Z,749,1608
est16=AFC809Z,813,1610
est17=AFN813Z,832,1607
est18=AFH773Z,856,1607
est19=AFJ820Z,856,1639
est20=AFK243Z,857,1636
est21=AFB290Z,877,1647
est22=AFB606Z,985,1601
est23=AFG134Z,1006,1658
est24=AFH693Z,1151,1672
est25=AFK492H,1415,2414
est26=AFK492Z,2417,2591
Translated Amino Acid sequence
cwptgknknyiinnkiipn*itinnkkknmldffhlkdvdeffrllekknlqnldnqidg
pgnlnwrttytekdfskvpkfrgiihivqirdlgtkihrdllyeimfeklldiarlnnes
kllkkmkfki*kqnstnittiiappiqt**sivlsms*tplllllplrqqwellvliknk
vkviplinllnsiflk*kvtnpnnhhhhtn*kknkik*iilpmrfhknq*kl*nsklkqr
linkhfhqlhlhikmkrnkinkkrlnkkrlnkkkvykkkikkkkikkkkvtknmvkflll
kfpkkkitkkkikkkkirkkinkkkitkkkkn*kinkkmvknlllkfhkmkl*klkliht
qglpmmmyllqrwklkh*khhcllklhl*qnnk*sqiksywctnkvisfqi*qhyykvd*
km*qskk*ktllklg*miiaiv*vilkmflyymlslvwvlelipkemlsklnqfvq*lvt
kfqssmvyl*lermdqlelklnilkplsqsliq*visvviykimki*nnynhfynnky*k
kkkkkkghmcsscrsrpld*srektshtsp*t*nik*MQLLLLTCLLQLIMVTNKAIASQ
ISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPLinsfnnw*qssnhlwciydwke
wtn*n*s*tysnlylnhsfne*yrs*ftk**kfktttiifttinikkkkkkkkatcaraa
grgr*tslekkpptpppepet*necnccc*lvycsl*wlqikq*hhkfhk*sifftaf*l
wfvqthqcilscldprvpssn*fl---

---XXXXVXXXPXSSXXXVSXAXMXVXALXXPLFAXXXFVXXXXVIXNXXLLVXXXSDFF


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllektkii*stik*yqiklq*iikkkic*ifsi*kt*mnfldfwkrriykt*itrlm
dqetsigepliqkkifpkflnsgvsfiscklei*eqrfieiycmk*clkny*illd*imn
qnf*kk*nsrfenktrrisqq**hhqyrlnnq*fyqchrhhyyyyyh*dnngsy*y**kt
k*r*fh**iy*trff*nkk*piptiititqtrrktksse*yyq*dstrinkncktansnr
d*stnifinftftsk*retr*trrg*trrg*tkrrytkrr*krrr*krrr*pkiw*nfyy
*nsprrr*pkrr*krrr*err*trrr*pkrrktrr*tkkw*riyy*nstk*nfrn*s*yt
pkvfq**ciycrdgs*sientivc*nyicnkttsnhk*kaigvqtk*flskydniitk*i
ercnsprskrpy*nwvk***l*cr*f*kcfciiccllygc*n*frkrcfqn*insfnnw*
qssnhlwciydwkewtn*n*s*tysnlylnhsfne*yrs*ftk**kfktttiifttinik
kkkkkkkatcaraagrgr*tslekkpptpppepet*necnccc*lvycsl*wlqikq*hh
kfhk*sifftaf*lwfvqthqcilscldprvpssn*fllsirsiigdkvpiiygvfmigk
ngptrikvehtqtsisithsmsdigrnlqnnenlkqlqsflqq*ilkkkkkkkrphvlel
qvaaarlv*rknlphlplnlkhkmnaivvvnlfiaayngyk*snsitnftnkaffslhss
cglsklinvsyhvwipgyrarinss---

---lxxxxxxxxxglpxxmxllxxwxlxxxxxxcllxlxlxxxxx*sxixsywcxxxvis
f

Frame B:
llaywkkqklynqq*nntklnynk**kkkyvrffpfkrrr*if*tfgkeeftkpr*pd*w
trkpqlenhlyrkrffqss*iqgyhsyran*rfrnkds*rsiv*nnv*ktiryc*ik**i
ktfkkneiqdlktkldeyhnnnsttntdliinsfinvidttttttttkttmgatsidkkq
segdsidksieldffkiksdqsqqsspshkleekqnqvnnitneipqesiktvkqqtqte
tnqqtfsstspshqneekqdkqeevkqeevkqkegiqkedkkeedkkeegnqkygeifii
eipqeednqkedkkeedkkedkqeednqkeekledkqkngeefiieipqnetleikvdth
prssnddvstaemevealktplfaettfvtkqqvitnkkllvykqsdffpnmttllqsrl
kdvtvqevkdptkiglndnsysvgdfenvfvlyavscmgartdserdafkiksirsiigd
kvpiiygvfmigkngptrikvehtqtsisithsmsdigrnlqnnenlkqlqsflqq*ilk
kkkkkkrphvlelqvaaarlv*rknlphlplnlkhkmnaivvvnlfiaayngyk*snsit
nftnkaffslhsscglsklinvsyhvwipgyrarinssyqfvq*lvtkfqssmvyl*ler
mdqlelklnilkplsqsliq*visvviykimki*nnynhfynnky*kkkkkkkghmcssc
rsrpld*srektshtsp*t*nik*MQLLLLTCLLQLIMVTNKAIASQISQIKHFFHCILV
VVCPNSSMYLIMSGSPGTELELIPL---

---fxxxxxxxpxvfxxxcxxcxdgsxsxxxxxvcxxxxcxxxxsnxxxxaigvxxx*fl
s

Frame C:
cwptgknknyiinnkiipn*itinnkkknmldffhlkdvdeffrllekknlqnldnqidg
pgnlnwrttytekdfskvpkfrgiihivqirdlgtkihrdllyeimfeklldiarlnnes
kllkkmkfki*kqnstnittiiappiqt**sivlsms*tplllllplrqqwellvliknk
vkviplinllnsiflk*kvtnpnnhhhhtn*kknkik*iilpmrfhknq*kl*nsklkqr
linkhfhqlhlhikmkrnkinkkrlnkkrlnkkkvykkkikkkkikkkkvtknmvkflll
kfpkkkitkkkikkkkirkkinkkkitkkkkn*kinkkmvknlllkfhkmkl*klkliht
qglpmmmyllqrwklkh*khhcllklhl*qnnk*sqiksywctnkvisfqi*qhyykvd*
km*qskk*ktllklg*miiaiv*vilkmflyymlslvwvlelipkemlsklnqfvq*lvt
kfqssmvyl*lermdqlelklnilkplsqsliq*visvviykimki*nnynhfynnky*k
kkkkkkghmcsscrsrpld*srektshtsp*t*nik*MQLLLLTCLLQLIMVTNKAIASQ
ISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPLinsfnnw*qssnhlwciydwke
wtn*n*s*tysnlylnhsfne*yrs*ftk**kfktttiifttinikkkkkkkkatcaraa
grgr*tslekkpptpppepet*necnccc*lvycsl*wlqikq*hhkfhk*sifftaf*l
wfvqthqcilscldprvpssn*fl---

---XXXXVXXXPXSSXXXVSXAXMXVXALXXPLFAXXXFVXXXXVIXNXXLLVXXXSDFF

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15642-1 (Contig-U15642-1Q)
/CSM_Contig/Contig-U15642-1Q.Seq.d
(2601 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15642-1 (Contig-U15642-1Q) /CSM_Contig/Conti... 1189 0.0
Contig-U12948-1 (Contig-U12948-1Q) /CSM_Contig/Conti... 1181 0.0
Contig-U15468-1 (Contig-U15468-1Q) /CSM_Contig/Conti... 505 e-142
Contig-U16267-1 (Contig-U16267-1Q) /CSM_Contig/Conti... 402 e-111
Contig-U15656-1 (Contig-U15656-1Q) /CSM_Contig/Conti... 355 2e-97
Contig-U15645-1 (Contig-U15645-1Q) /CSM_Contig/Conti... 266 2e-70
Contig-U16304-1 (Contig-U16304-1Q) /CSM_Contig/Conti... 222 2e-57
Contig-U16054-1 (Contig-U16054-1Q) /CSM_Contig/Conti... 159 3e-38
Contig-U16252-1 (Contig-U16252-1Q) /CSM_Contig/Conti... 153 2e-36
Contig-U15671-1 (Contig-U15671-1Q) /CSM_Contig/Conti... 60 2e-08

>Contig-U15642-1 (Contig-U15642-1Q) /CSM_Contig/Contig-U15642-1Q.Seq.d
Length = 2601

Score = 1189 bits (600), Expect = 0.0
Identities = 600/600 (100%)
Strand = Plus / Plus


Query: 1018 tggtgaagaatttattattgaaattccacaaaatgaaactttagaaattaaagttgatac 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 tggtgaagaatttattattgaaattccacaaaatgaaactttagaaattaaagttgatac 1077


Query: 1078 acacccaaggtcttccaatgatgatgtatctactgcagagatggaagttgaagcattgaa 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 acacccaaggtcttccaatgatgatgtatctactgcagagatggaagttgaagcattgaa 1137


Query: 1138 aacaccattgtttgctgaaactacatttgtaacaaaacaacaagtaatcacaaataaaaa 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 aacaccattgtttgctgaaactacatttgtaacaaaacaacaagtaatcacaaataaaaa 1197


Query: 1198 gctattggtgtacaaacaaagtgatttctttccaaatatgacaacattattacaaagtag 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1198 gctattggtgtacaaacaaagtgatttctttccaaatatgacaacattattacaaagtag 1257


Query: 1258 attgaaagatgtaacagtccaagaagtaaaagaccctactaaaattgggttaaatgataa 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1258 attgaaagatgtaacagtccaagaagtaaaagaccctactaaaattgggttaaatgataa 1317


Query: 1318 tagctatagtgtaggtgattttgaaaatgtttttgtattatatgctgtctcttgtatggg 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 tagctatagtgtaggtgattttgaaaatgtttttgtattatatgctgtctcttgtatggg 1377


Query: 1378 tgctagaactgattccgaaagagatgctttcaaaattaaatcaattcgttcaataattgg 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1378 tgctagaactgattccgaaagagatgctttcaaaattaaatcaattcgttcaataattgg 1437


Query: 1438 tgacaaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaat 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 tgacaaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaat 1497


Query: 1498 taaagttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcg 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 taaagttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcg 1557


Query: 1558 taatttacaaaataatgaaaatttaaaacaactacaatcatttttacaacaataaatatt 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1558 taatttacaaaataatgaaaatttaaaacaactacaatcatttttacaacaataaatatt 1617


Score = 904 bits (456), Expect = 0.0
Identities = 470/477 (98%)
Strand = Plus / Plus


Query: 1641 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1641 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1700


Query: 1701 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1701 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1760


Query: 1761 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 1820
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1761 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 1820


Query: 1821 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1821 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1880


Query: 1881 ggatccccgggtaccgagctcgaattaattcctcttatcaattcgttcaataattggtga 1940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1881 ggatccccgggtaccgagctcgaattaattcctcttatcaattcgttcaataattggtga 1940


Query: 1941 caaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaattaa 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1941 caaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaattaa 2000


Query: 2001 agttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcgtaa 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2001 agttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcgtaa 2060


Query: 2061 tttacaaaataatgaaaatttaaaacaactacaatcatttttacaacaataaatatt 2117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 tttacaaaataatgaaaatttaaaacaactacaatcatttttacaacaataaatatt 2117


Score = 785 bits (396), Expect = 0.0
Identities = 434/453 (95%)
Strand = Plus / Plus


Query: 29 ttatataatcaacaataaaataataccaaattaaattacaataaataatnnnnnnnnnnn 88
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 ttatataatcaacaataaaataataccaaattaaattacaataaataataaaaaaaaaaa 88


Query: 89 tatgttagattttttccatttaaaagacgtagatgaattttttagacttttggaaaagaa 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tatgttagattttttccatttaaaagacgtagatgaattttttagacttttggaaaagaa 148


Query: 149 gaatttacaaaacctagataaccagattgatggaccaggaaacctcaattggagaaccac 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gaatttacaaaacctagataaccagattgatggaccaggaaacctcaattggagaaccac 208


Query: 209 ttatacagaaaaagatttttccaaagttcctaaattcaggggtatcattcatatcgtgca 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttatacagaaaaagatttttccaaagttcctaaattcaggggtatcattcatatcgtgca 268


Query: 269 aattagagatttaggaacaaagattcatagagatctattgtatgaaataatgtttgaaaa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aattagagatttaggaacaaagattcatagagatctattgtatgaaataatgtttgaaaa 328


Query: 329 actattagatattgctagattaaataatgaatcaaaacttttnnnnnnnntgaaattcaa 388
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 329 actattagatattgctagattaaataatgaatcaaaacttttaaaaaaaatgaaattcaa 388


Query: 389 gatttgaaaacaaaactcgacgaatatcacaacaataatagcaccaccaatacagactta 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gatttgaaaacaaaactcgacgaatatcacaacaataatagcaccaccaatacagactta 448


Query: 449 ataatcaatagttttatcaatgtcatagacacc 481
|||||||||||||||||||||||||||||||||
Sbjct: 449 ataatcaatagttttatcaatgtcatagacacc 481


Score = 511 bits (258), Expect = e-144
Identities = 272/279 (97%)
Strand = Plus / Plus


Query: 499 cactaagacaacaatgggagctactagtattgataaaaaacaaagtgaaggtgattccat 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cactaagacaacaatgggagctactagtattgataaaaaacaaagtgaaggtgattccat 558


Query: 559 tgataaatctattgaactcgannnnnnnaaaataaaaagtgaccaatcccaacaatcatc 618
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 559 tgataaatctattgaactcgatttttttaaaataaaaagtgaccaatcccaacaatcatc 618


Query: 619 accatcacacaaactagaagaaaaacaaaatcaagtgaataatattaccaatgagattcc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 accatcacacaaactagaagaaaaacaaaatcaagtgaataatattaccaatgagattcc 678


Query: 679 acaagaatcaataaaaactgtaaaacagcaaactcaaacagagactaatcaacaaacatt 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acaagaatcaataaaaactgtaaaacagcaaactcaaacagagactaatcaacaaacatt 738


Query: 739 ttcatcaacttcaccttcacatcaaaatgaagagaaaca 777
|||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttcatcaacttcaccttcacatcaaaatgaagagaaaca 777


Score = 505 bits (255), Expect = e-142
Identities = 269/276 (97%)
Strand = Plus / Plus


Query: 1641 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2200


Query: 1701 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2260


Query: 1761 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 1820
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2261 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 2320


Query: 1821 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2321 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2380


Query: 1881 ggatccccgggtaccgagctcgaattaattcctctt 1916
||||||||||||||||||||||||||||||||||||
Sbjct: 2381 ggatccccgggtaccgagctcgaattaattcctctt 2416


Score = 505 bits (255), Expect = e-142
Identities = 269/276 (97%)
Strand = Plus / Plus


Query: 2141 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1641 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1700


Query: 2201 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1701 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1760


Query: 2261 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 2320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1761 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 1820


Query: 2321 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1821 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1880


Query: 2381 ggatccccgggtaccgagctcgaattaattcctctt 2416
||||||||||||||||||||||||||||||||||||
Sbjct: 1881 ggatccccgggtaccgagctcgaattaattcctctt 1916


Score = 505 bits (255), Expect = e-142
Identities = 269/276 (97%)
Strand = Plus / Plus


Query: 2141 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2200


Query: 2201 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2260


Query: 2261 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 2320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2261 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 2320


Query: 2321 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2321 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2380


Query: 2381 ggatccccgggtaccgagctcgaattaattcctctt 2416
||||||||||||||||||||||||||||||||||||
Sbjct: 2381 ggatccccgggtaccgagctcgaattaattcctctt 2416


Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Plus


Query: 1917 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 1476


Query: 1977 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 1536


Query: 2037 ttcaatgagtgatatcggtcgtaatttacaaaataatgaaaatttaaaacaactacaatc 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 ttcaatgagtgatatcggtcgtaatttacaaaataatgaaaatttaaaacaactacaatc 1596


Query: 2097 atttttacaacaataaatatt 2117
|||||||||||||||||||||
Sbjct: 1597 atttttacaacaataaatatt 1617


Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Plus


Query: 1417 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1917 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 1976


Query: 1477 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1977 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 2036


Query: 1537 ttcaatgagtgatatcggtcgtaatttacaaaataatgaaaatttaaaacaactacaatc 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 ttcaatgagtgatatcggtcgtaatttacaaaataatgaaaatttaaaacaactacaatc 2096


Query: 1597 atttttacaacaataaatatt 1617
|||||||||||||||||||||
Sbjct: 2097 atttttacaacaataaatatt 2117


Score = 58.0 bits (29), Expect = 7e-08
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 881 tatggtgaaatttttattattgaaattcc 909
|||||||||||||||||||||||||||||
Sbjct: 881 tatggtgaaatttttattattgaaattcc 909


Score = 50.1 bits (25), Expect = 2e-05
Identities = 145/145 (100%)
Strand = Plus / Plus


Query: 2457 ggtcttccnntgntnatgtntctnctgcnnngatggnagttgnagcnttgnnnncnccnt 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2457 ggtcttccnntgntnatgtntctnctgcnnngatggnagttgnagcnttgnnnncnccnt 2516


Query: 2517 tgtttgctgncnctncntttgtnncnnnncnncnagtaatcncnaatannnagctattgg 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2517 tgtttgctgncnctncntttgtnncnnnncnncnagtaatcncnaatannnagctattgg 2576


Query: 2577 tgtncncncanagtgatttctttcc 2601
|||||||||||||||||||||||||
Sbjct: 2577 tgtncncncanagtgatttctttcc 2601


Score = 40.1 bits (20), Expect = 0.017
Identities = 41/51 (80%)
Strand = Plus / Plus


Query: 2551 agtaatcncnaatannnagctattggtgtncncncanagtgatttctttcc 2601
||||||| | |||| |||||||||||| | || ||||||||||||||
Sbjct: 1180 agtaatcacaaataaaaagctattggtgtacaaacaaagtgatttctttcc 1230


Score = 40.1 bits (20), Expect = 0.017
Identities = 41/51 (80%)
Strand = Plus / Plus


Query: 1180 agtaatcacaaataaaaagctattggtgtacaaacaaagtgatttctttcc 1230
||||||| | |||| |||||||||||| | || ||||||||||||||
Sbjct: 2551 agtaatcncnaatannnagctattggtgtncncncanagtgatttctttcc 2601


Score = 34.2 bits (17), Expect = 1.0
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 893 tttattattgaaattcc 909
|||||||||||||||||
Sbjct: 1028 tttattattgaaattcc 1044


Score = 34.2 bits (17), Expect = 1.0
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1028 tttattattgaaattcc 1044
|||||||||||||||||
Sbjct: 893 tttattattgaaattcc 909


Score = 32.2 bits (16), Expect = 4.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 629 aaactagaagaaaaacaaaa 648
||||||||||| ||||||||
Sbjct: 995 aaactagaagataaacaaaa 1014


>Contig-U12948-1 (Contig-U12948-1Q) /CSM_Contig/Contig-U12948-1Q.Seq.d
Length = 1284

Score = 1181 bits (596), Expect = 0.0
Identities = 599/600 (99%)
Strand = Plus / Plus


Query: 1018 tggtgaagaatttattattgaaattccacaaaatgaaactttagaaattaaagttgatac 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tggtgaagaatttattattgaaattccacaaaatgaaactttagaaattaaagttgatac 681


Query: 1078 acacccaaggtcttccaatgatgatgtatctactgcagagatggaagttgaagcattgaa 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 acacccaaggtcttccaatgatgatgtatctactgcagagatggaagttgaagcattgaa 741


Query: 1138 aacaccattgtttgctgaaactacatttgtaacaaaacaacaagtaatcacaaataaaaa 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aacaccattgtttgctgaaactacatttgtaacaaaacaacaagtaatcacaaataaaaa 801


Query: 1198 gctattggtgtacaaacaaagtgatttctttccaaatatgacaacattattacaaagtag 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gctattggtgtacaaacaaagtgatttctttccaaatatgacaacattattacaaagtag 861


Query: 1258 attgaaagatgtaacagtccaagaagtaaaagaccctactaaaattgggttaaatgataa 1317
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 862 attgaaagatgtaacagtccaagaagtaaaagaccttactaaaattgggttaaatgataa 921


Query: 1318 tagctatagtgtaggtgattttgaaaatgtttttgtattatatgctgtctcttgtatggg 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 tagctatagtgtaggtgattttgaaaatgtttttgtattatatgctgtctcttgtatggg 981


Query: 1378 tgctagaactgattccgaaagagatgctttcaaaattaaatcaattcgttcaataattgg 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 tgctagaactgattccgaaagagatgctttcaaaattaaatcaattcgttcaataattgg 1041


Query: 1438 tgacaaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaat 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 tgacaaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaat 1101


Query: 1498 taaagttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcg 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 taaagttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcg 1161


Query: 1558 taatttacaaaataatgaaaatttaaaacaactacaatcatttttacaacaataaatatt 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 taatttacaaaataatgaaaatttaaaacaactacaatcatttttacaacaataaatatt 1221


Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Plus


Query: 1917 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 1080


Query: 1977 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 1140


Query: 2037 ttcaatgagtgatatcggtcgtaatttacaaaataatgaaaatttaaaacaactacaatc 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ttcaatgagtgatatcggtcgtaatttacaaaataatgaaaatttaaaacaactacaatc 1200


Query: 2097 atttttacaacaataaatatt 2117
|||||||||||||||||||||
Sbjct: 1201 atttttacaacaataaatatt 1221


Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 882 atggtgaaatttttattattgaaattcc 909
||||||||| ||||||||||||||||||
Sbjct: 485 atggtgaaaattttattattgaaattcc 512


Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus


Query: 1018 tggtgaagaatttattattgaaattccacaa 1048
||||||| | |||||||||||||||||||||
Sbjct: 486 tggtgaaaattttattattgaaattccacaa 516


Score = 40.1 bits (20), Expect = 0.017
Identities = 41/51 (80%)
Strand = Plus / Plus


Query: 2551 agtaatcncnaatannnagctattggtgtncncncanagtgatttctttcc 2601
||||||| | |||| |||||||||||| | || ||||||||||||||
Sbjct: 784 agtaatcacaaataaaaagctattggtgtacaaacaaagtgatttctttcc 834


Score = 34.2 bits (17), Expect = 1.0
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 893 tttattattgaaattcc 909
|||||||||||||||||
Sbjct: 632 tttattattgaaattcc 648


Score = 32.2 bits (16), Expect = 4.1
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 629 aaactagaagaaaaacaaaa 648
||||||||||| ||||||||
Sbjct: 599 aaactagaagataaacaaaa 618


>Contig-U15468-1 (Contig-U15468-1Q) /CSM_Contig/Contig-U15468-1Q.Seq.d
Length = 2884

Score = 505 bits (255), Expect = e-142
Identities = 269/276 (97%)
Strand = Plus / Plus


Query: 2141 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1978 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2037


Query: 2201 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2038 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2097


Query: 2261 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 2320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 2157


Query: 2321 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2217


Query: 2381 ggatccccgggtaccgagctcgaattaattcctctt 2416
||||||||||||||||||||||||||||||||||||
Sbjct: 2218 ggatccccgggtaccgagctcgaattaattcctctt 2253


Score = 505 bits (255), Expect = e-142
Identities = 269/276 (97%)
Strand = Plus / Plus


Query: 1641 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1978 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2037


Query: 1701 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2038 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2097


Query: 1761 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 1820
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 2157


Query: 1821 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2217


Query: 1881 ggatccccgggtaccgagctcgaattaattcctctt 1916
||||||||||||||||||||||||||||||||||||
Sbjct: 2218 ggatccccgggtaccgagctcgaattaattcctctt 2253


Score = 505 bits (255), Expect = e-142
Identities = 269/276 (97%)
Strand = Plus / Plus


Query: 2141 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2537


Query: 2201 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2597


Query: 2261 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 2320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2598 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 2657


Query: 2321 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2658 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2717


Query: 2381 ggatccccgggtaccgagctcgaattaattcctctt 2416
||||||||||||||||||||||||||||||||||||
Sbjct: 2718 ggatccccgggtaccgagctcgaattaattcctctt 2753


Score = 505 bits (255), Expect = e-142
Identities = 269/276 (97%)
Strand = Plus / Plus


Query: 1641 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2537


Query: 1701 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2597


Query: 1761 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 1820
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2598 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 2657


Query: 1821 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2658 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2717


Query: 1881 ggatccccgggtaccgagctcgaattaattcctctt 1916
||||||||||||||||||||||||||||||||||||
Sbjct: 2718 ggatccccgggtaccgagctcgaattaattcctctt 2753


Score = 438 bits (221), Expect = e-122
Identities = 235/242 (97%)
Strand = Plus / Plus


Query: 1641 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1537


Query: 1701 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1597


Query: 1761 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 1820
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 1657


Query: 1821 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1658 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1717


Query: 1881 gg 1882
||
Sbjct: 1718 gg 1719


Score = 438 bits (221), Expect = e-122
Identities = 235/242 (97%)
Strand = Plus / Plus


Query: 2141 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 ggccacatgtgctcgagctgcaggtcgcggccgctagactagtctagagaaaaaacctcc 1537


Query: 2201 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 cacacctccccctgaacctgaaacataaaatgaatgcaattgttgttgttaacttgttta 1597


Query: 2261 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcan 2320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 ttgcagcttataatggttacaaataaagcaatagcatcacaaatttcacaaataaagcat 1657


Query: 2321 nnnnnncactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1658 ttttttcactgcattctagttgtggtttgtccaaactcatcaatgtatcttatcatgtct 1717


Query: 2381 gg 2382
||
Sbjct: 1718 gg 1719


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 61,105
Number of Sequences: 8402
Number of extensions: 61105
Number of successful extensions: 5921
Number of sequences better than 10.0: 619
length of query: 2601
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2584
effective length of database: 7,932,708
effective search space: 20498117472
effective search space used: 20498117472
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 4
Homology vs DNA
Query= Contig-U15642-1 (Contig-U15642-1Q) /CSM_Contig/Contig-U15642-1Q.Seq.d
(2601 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ344667) Dictyostelium discoideum cDNA clone:dda20h06, 3' ... 1072 0.0 2
(BJ376595) Dictyostelium discoideum cDNA clone:ddc29n03, 3' ... 1065 0.0 2
(BJ343286) Dictyostelium discoideum cDNA clone:dda22i13, 3' ... 1065 0.0 2
(BJ341282) Dictyostelium discoideum cDNA clone:dda6b04, 3' e... 1065 0.0 2
(BJ345577) Dictyostelium discoideum cDNA clone:dda28j04, 3' ... 1065 0.0 3
(BJ343649) Dictyostelium discoideum cDNA clone:dda16b19, 3' ... 1057 0.0 2
(BJ401738) Dictyostelium discoideum cDNA clone:dds19a12, 3' ... 1051 0.0 2
(BJ345007) Dictyostelium discoideum cDNA clone:dda21e12, 3' ... 1053 0.0 2
(BJ398350) Dictyostelium discoideum cDNA clone:dds12j02, 3' ... 1065 0.0 2
(BJ340849) Dictyostelium discoideum cDNA clone:dda4k02, 3' e... 1059 0.0 1
(BJ342285) Dictyostelium discoideum cDNA clone:dda13c09, 3' ... 1047 0.0 1
(BJ340767) Dictyostelium discoideum cDNA clone:dda3c24, 3' e... 1017 0.0 2
(BJ387052) Dictyostelium discoideum cDNA clone:dds12j02, 5' ... 553 0.0 4
(BJ329799) Dictyostelium discoideum cDNA clone:dda26h09, 5' ... 553 0.0 4
(AU037998) Dictyostelium discoideum slug cDNA, clone SSH140. 345 0.0 4
(BJ329425) Dictyostelium discoideum cDNA clone:dda24m22, 5' ... 553 0.0 3
(BJ325207) Dictyostelium discoideum cDNA clone:dda13c09, 5' ... 547 0.0 3
(BJ377271) Dictyostelium discoideum cDNA clone:ddc23d03, 3' ... 829 0.0 1
(BJ347178) Dictyostelium discoideum cDNA clone:dda26h09, 3' ... 795 0.0 2
(BJ326508) Dictyostelium discoideum cDNA clone:dda16b19, 5' ... 553 0.0 3
(BJ327808) Dictyostelium discoideum cDNA clone:dda21h24, 5' ... 541 0.0 3
(BJ327342) Dictyostelium discoideum cDNA clone:dda20h06, 5' ... 539 0.0 3
(BJ327660) Dictyostelium discoideum cDNA clone:dda21e12, 5' ... 345 0.0 6
(EU676803) Gene trapping vector VICTR74 inferred integrated ... 258 0.0 4
(BJ323969) Dictyostelium discoideum cDNA clone:dda4k02, 5' e... 345 0.0 4
(EU676804) Gene trapping vector VICTR48 inferred integrated ... 258 0.0 4
(DJ045215) Methods and compositions for defining gene function. 258 0.0 4
(DI150513) Methods and Compositions for Defining Gene Function. 258 0.0 4
(CS073943) Sequence 7 from Patent WO2005033315. 258 0.0 4
(DQ349229) Expression vector pe2TetOn(PacI), complete sequence. 258 0.0 6
(DQ349230) Expression vector pe2TetOn/FKNF(PacI), complete s... 258 0.0 6
(DQ349228) Expression vector peTetOn(PacI), complete sequence. 258 0.0 6
(M80484) Cloning vector pBLCAT6 encoding chloramphenicol ace... 258 0.0 5
(M80483) Cloning vector pBLCAT5 encoding thymidine kinase pr... 258 0.0 5
(DQ349231) Expression vector peTetOn/FKNF(PacI), complete se... 258 0.0 6
(AR163570) Sequence 5 from patent US 6270996. 260 0.0 4
(AR101860) Sequence 3 from patent US 6083716. 260 0.0 4
(AR009152) Sequence 2 from patent US 5756283. 260 0.0 4
(AF058756) Cloning vector pFR-Luc, complete sequence. 258 0.0 6
(FB292646) Sequence 41 from Patent WO2007109370. 258 0.0 5
(AR562497) Sequence 5 from patent US 6759236. 258 0.0 5
(AB003468) Cloning vector pAP3neo DNA, complete sequence. 258 0.0 4
(U13860) pMSG cloning vector, complete sequence. 258 0.0 4
(U13861) pMSG-CAT cloning vector, complete sequence. 258 0.0 4
(U02443) Cloning vector pMAM, complete sequence. 258 0.0 5
(U02432) Cloning vector pMAMneo, complete sequence. 258 0.0 5
(U89930) Cloning vector pTet-On, complete sequence. 258 0.0 4
(U89929) Cloning vector pTet-Off, complete sequence. 258 0.0 4
(DD441898) TIME-LAPSE CELL ANALYSIS METHOD. 258 0.0 4
(DD441897) TIME-LAPSE CELL ANALYSIS METHOD. 258 0.0 4
(DD414202) COMPOSITION AND METHOD FOR INCREASING EFFICIENCY ... 258 0.0 4
(DD414201) COMPOSITION AND METHOD FOR INCREASING EFFICIENCY ... 258 0.0 4
(CQ871854) Sequence 27 from Patent WO2004079007. 258 0.0 4
(CQ871853) Sequence 26 from Patent WO2004079007. 258 0.0 4
(CQ871825) Sequence 16 from Patent WO2004079332. 258 0.0 4
(CQ871824) Sequence 15 from Patent WO2004079332. 258 0.0 4
(U02430) Cloning vector pMAMneoBlue, complete sequence. 258 0.0 5
(U02431) Cloning vector pMAMneo-CAT, complete sequence. 258 0.0 5
(U02448) Cloning vector pMAMneo-LUC, complete sequence. 258 0.0 5
(EA251865) Sequence 12 from patent US 7232899. 258 0.0 5
(DJ388086) VECTORS FOR OCULAR TRANSDUCTION AND USE THEREFOR ... 258 0.0 5
(CQ970353) Sequence 12 from Patent EP1471146. 258 0.0 5
(BD268208) Adenovirus vector, packaging cell line, compositi... 258 0.0 5
(BD021940) Packaging cell systems for use in promotion of th... 258 0.0 5
(AX356041) Sequence 12 from Patent WO0183729. 258 0.0 5
(DD362362) METHOD OF DESIGNING PRIMERS OVER SEQUENCES ARRANG... 258 0.0 4
(EA251895) Sequence 49 from patent US 7232899. 258 0.0 5
(DJ444645) MODIFIED FIBER PROTEINS FOR EFFICIENT RECEPTOR BI... 258 0.0 5
(DJ388106) VECTORS FOR OCULAR TRANSDUCTION AND USE THEREFOR ... 258 0.0 5
(DJ354437) ADENOVIRUS PARTICLES WITH ENHANCED INFECTIVITY OF... 258 0.0 5
(DD313230) Fiber Shaft Modifications for Efficient Targeting. 258 0.0 5
(CS144962) Sequence 26 from Patent WO2005075506. 258 0.0 5
(CQ973669) Sequence 24 from Patent WO2004111251. 258 0.0 5
(CQ947247) Sequence 48 from Patent WO2004099422. 258 0.0 5
(BD268238) Adenovirus vector, packaging cell line, compositi... 258 0.0 5
(BD312817) Conditional gene trapping construct for the disru... 258 0.0 4
(AX114870) Sequence 30 from Patent WO0129208. 258 0.0 4
(AF416989) Synthetic construct plasmid pTRE_hTF_Luc, complet... 258 0.0 5
(AF416988) Synthetic construct plasmid pTRE_PSKH1_Luc, compl... 258 0.0 5
(EA251868) Sequence 15 from patent US 7232899. 258 0.0 5
(DJ388089) VECTORS FOR OCULAR TRANSDUCTION AND USE THEREFOR ... 258 0.0 5
(CQ970356) Sequence 15 from Patent EP1471146. 258 0.0 5
(BD268211) Adenovirus vector, packaging cell line, compositi... 258 0.0 5
(BD021943) Packaging cell systems for use in promotion of th... 258 0.0 5
(AX356044) Sequence 15 from Patent WO0183729. 258 0.0 5
(EA262091) Sequence 20 from patent US 7235380. 258 0.0 4
(AF093685) Luciferase reporter vector pXP2 *SA *PS, complete... 258 0.0 4
(DD260222) An expression vector which can control induced ex... 258 0.0 4
(AF093688) MMTV-luciferase reporter vector pHH Luc *SA *PS, ... 258 0.0 4
(AF093684) Luciferase reporter vector pXP2 *SA, complete seq... 258 0.0 4
(BD093100) Gene encoding promoter region of tumor suppressor... 258 0.0 4
(AF093687) MMTV-luciferase reporter vector pHH Luc *SA, comp... 258 0.0 4
(CS799102) Sequence 19 from Patent WO2007088051. 258 0.0 4
(AF093683) Luciferase reporter vector pXP1, complete sequence. 258 0.0 4
(AF093682) Luciferase reporter vector pXP2, complete sequence. 258 0.0 4
(CS173327) Sequence 1 from Patent WO2005075514. 258 0.0 4
(DD260224) An expression vector which can control induced ex... 258 0.0 4
(DD260225) An expression vector which can control induced ex... 258 0.0 4
(AF093686) MMTV-luciferase reporter vector pHH Luc, complete... 258 0.0 4
(CS799103) Sequence 20 from Patent WO2007088051. 258 0.0 4
(DD260221) An expression vector which can control induced ex... 258 0.0 4
(DD260223) An expression vector which can control induced ex... 258 0.0 4
(AF047654) Expression vector pSTAR, complete sequence. 258 0.0 4
(I87174) Sequence 8 from patent US 5703209. 258 0.0 4
(I87173) Sequence 6 from patent US 5703209. 258 0.0 4
(I77053) Sequence 8 from patent US 5693478. 258 0.0 4
(I77052) Sequence 6 from patent US 5693478. 258 0.0 4
(I60509) Sequence 8 from patent US 5656477. 258 0.0 4
(I60508) Sequence 6 from patent US 5656477. 258 0.0 4
(I58323) Sequence 8 from patent US 5652092. 258 0.0 4
(I58322) Sequence 6 from patent US 5652092. 258 0.0 4
(AX772869) Sequence 1 from Patent WO03046172. 258 0.0 4
(I58610) Sequence 170 from patent US 5652138. 258 0.0 4
(I58596) Sequence 156 from patent US 5652138. 258 0.0 4
(AR038321) Sequence 170 from patent US 5804440. 258 0.0 4
(AR038307) Sequence 156 from patent US 5804440. 258 0.0 4
(EA286739) Sequence 1 from patent US 7265262. 258 0.0 4
(AX553919) Sequence 1 from Patent WO02074935. 258 0.0 4
(CK442836) GQ0014.TB_A19 GQ001: Male strobili developmental ... 153 0.0 8
(DL005155) CANCER SPECIFIC PROMOTERS. 258 0.0 5
(DJ330230) ANTITUMOR EFFECT OF MUTANT BIK. 258 0.0 5
(CS193243) Sequence 20 from Patent WO2005103251. 258 0.0 5
(CQ895674) Sequence 34 from Patent WO2004089981. 258 0.0 5
(DL005156) CANCER SPECIFIC PROMOTERS. 258 0.0 5
(DJ330231) ANTITUMOR EFFECT OF MUTANT BIK. 258 0.0 5
(CS193244) Sequence 21 from Patent WO2005103251. 258 0.0 5
(CQ895675) Sequence 35 from Patent WO2004089981. 258 0.0 5
(DI100559) Method of expressing recombinant protein in CHO c... 258 0.0 4
(DD357296) Method of expressing recombinant protein in CHO c... 258 0.0 4
(DI100998) Method of expressing recombinant protein in CHO c... 258 0.0 4
(DD357297) Method of expressing recombinant protein in CHO c... 258 0.0 4
(Y07702) Plasmid pPV, an IRES containing vector. 258 0.0 4
(GC515452) Sequence 3 from patent US 7407790. 258 0.0 4
(DI100940) Method of expressing recombinant protein in CHO c... 258 0.0 4
(DD357299) Method of expressing recombinant protein in CHO c... 258 0.0 4
(CS714370) Sequence 25 from Patent WO2006079120. 258 0.0 5
(EA423308) Sequence 25 from patent US 7326567. 258 0.0 4
(DL136116) PLASMID SYSTEM FOR MULTIGENE EXPRESSION. 258 0.0 4
(DJ052331) PLASMID SYSTEM FOR MULTIGENE EXPRESSION. 258 0.0 4
(CS101424) Sequence 25 from Patent WO2005047512. 258 0.0 4
(EA423310) Sequence 27 from patent US 7326567. 258 0.0 4
(DL136118) PLASMID SYSTEM FOR MULTIGENE EXPRESSION. 258 0.0 4
(DJ052333) PLASMID SYSTEM FOR MULTIGENE EXPRESSION. 258 0.0 4
(CS101426) Sequence 27 from Patent WO2005047512. 258 0.0 4
(AC131305) Homo sapiens clone -37C8, LOW-PASS SEQUENCE SAMPL... 258 0.0 4
(DL196001) ASSEMBLY AND FOLDING OF Fc-INTERFERON-BETA FUSION... 250 0.0 4
(DL195999) ASSEMBLY AND FOLDING OF Fc-INTERFERON-BETA FUSION... 250 0.0 4
(DL195997) ASSEMBLY AND FOLDING OF Fc-INTERFERON-BETA FUSION... 250 0.0 4
(CS319467) Sequence 18 from Patent WO2006000448. 250 0.0 4
(CS319465) Sequence 16 from Patent WO2006000448. 250 0.0 4
(CS319463) Sequence 14 from Patent WO2006000448. 250 0.0 4
(E27660) Recombinant human mannan binding protein and proces... 258 0.0 4
(AR881473) Sequence 25 from patent US 7049099. 258 0.0 4
(DI070048) Recombinant Tumor Specific Antibody And Use Thereof. 250 e-180 4
(DD096315) Recombinant Tumor Specific Antibody And Use Thereof. 250 e-180 4
(AR772973) Sequence 40 from patent US 6969517. 250 e-180 4
(EA060921) Sequence 4 from patent US 7169904. 250 e-180 4
(DI124715) IMMUNOCYTOKINE SEQUENCES AND USES THEREOF. 250 e-180 4
(DD434606) Immunocytokine Sequences and Uses Thereof. 250 e-180 4
(CQ830324) Sequence 4 from Patent WO2004055056. 250 e-180 4
(AR207282) Sequence 19 from patent US 6372500. 258 e-179 4
(CS165133) Sequence 8 from Patent WO2005084430. 258 e-179 4
(CS165132) Sequence 7 from Patent WO2005084430. 258 e-179 4
(U25266) Ligation-independent promoter-cloning vector pLUC/L... 258 e-178 4
(X65323) Cloning vector pGL2-Basic. 258 e-178 4
(U09660) Cloning vector pSEAP-Basic, complete sequence. 258 e-178 4
(AR089207) Sequence 3 from patent US 5994061. 258 e-178 4
(AR089206) Sequence 2 from patent US 5994061. 258 e-178 4
(DD345386) GENE REPORTER ASSAY, KIT, AND CELLS FOR DETERMINI... 258 e-178 4
(CQ815105) Sequence 1 from Patent WO2004039990. 258 e-178 4
(AR089208) Sequence 4 from patent US 5994061. 258 e-178 4
(U09663) Cloning vector pSEAP-Promoter, complete sequence. 258 e-178 4
(AX469883) Sequence 2 from Patent EP1221283. 258 e-178 4
(AR879845) Sequence 2 from patent US 7045678. 258 e-178 4
(AR789140) Sequence 2 from patent US 6984518. 258 e-178 4
(AR089205) Sequence 1 from patent US 5994061. 258 e-178 4
(U19930) Cloning vector pGlac, complete sequence. 258 e-178 4
(U19931) Cloning vector pGlacRSV, complete sequence. 258 e-178 4
(U13184) Cloning vector pbetagal-Basic, complete sequence. 258 e-178 4
(AF098285) Cloning vector pFR-Bgal, complete sequence. 258 e-178 4
(U13187) Cloning vector pbetagal-Promoter, complete sequence. 258 e-178 4
(X65325) Cloning vector pGL2-Enhancer. 258 e-178 4
(X65324) Cloning vector pGL2-Control. 258 e-178 4
(U09662) Cloning vector pSEAP-Enhancer, complete sequence. 258 e-178 4
(U09661) Cloning vector pSEAP-Control, complete sequence. 258 e-178 4
(CS802334) Sequence 153 from Patent WO2007091099. 258 e-177 4
(A83151) Sequence 1 from Patent WO9851807. 258 e-177 4
(AR207264) Sequence 1 from patent US 6372500. 258 e-177 4
(U13185) Cloning vector pbetagal-Enhancer, complete sequence. 258 e-177 4
(U13186) Cloning vector pbetagal-Control, complete sequence. 258 e-177 4
(AF053698) Reporter vector pAP1-Luc, complete sequence. 258 e-177 6
(AF053461) Reporter vector pCRE-Luc, complete sequence. 258 e-177 6
(AF053315) Reporter vector pNFkB-Luc, complete sequence. 258 e-177 6
(AF167311) Reporter plasmid pGAS-Luc, complete sequence. 258 e-177 6
(AF053462) Reporter vector pSRE-Luc, complete sequence. 258 e-177 6
(AF081837) Cloning vector p53-luc, complete sequence. 258 e-177 6
(BD263088) Transgenic circulating endothelial cells. 258 e-177 5
(AR635294) Sequence 2 from patent US 6852537. 258 e-177 5
(X65326) Cloning vector pGL2-Promoter. 258 e-176 4
(AF262031) Cloning vector pXPG, complete sequence. 153 e-175 6
(AC130702) Homo sapiens clone -2183C382, LOW-PASS SEQUENCE S... 258 e-173 6
(AC130284) Homo sapiens clone -2183C317, LOW-PASS SEQUENCE S... 258 e-173 5
(CS802229) Sequence 48 from Patent WO2007091099. 258 e-169 4
(AY569778) Cloning vector pPRCG, complete sequence. 258 e-169 4
(CS802237) Sequence 56 from Patent WO2007091099. 258 e-168 4
(CS802236) Sequence 55 from Patent WO2007091099. 258 e-168 4
(CS802338) Sequence 157 from Patent WO2007091099. 258 e-168 4
(CS802337) Sequence 156 from Patent WO2007091099. 258 e-168 4
(CS802332) Sequence 151 from Patent WO2007091099. 258 e-168 4
(CS802333) Sequence 152 from Patent WO2007091099. 258 e-168 4
(CS802342) Sequence 161 from Patent WO2007091099. 258 e-168 5
(EA060683) Sequence 5 from patent US 7169612. 258 e-167 4
(DI124642) Use of EDG2 receptor in an animal model of heartf... 258 e-167 4
(DD414329) Use of EDG2 receptor in an animal model of heart ... 258 e-167 4
(CQ818355) Sequence 5 from Patent WO2004044003. 258 e-167 4
(CQ812178) Sequence 5 from Patent EP1418185. 258 e-167 4
(DQ305103) RNAi cloning and transformation vector pFRiPE, co... 258 e-165 4
(DD258381) METHODS OF IDENTIFYING COMPOUNDS THAT MODULATE A ... 258 e-159 4
(CS108683) Sequence 1 from Patent WO2005051432. 260 e-149 4
(BD433030) REPLICATION DEFICIENT ADENOVIRAL TNF VECTOR. 260 e-149 4
(AX382187) Sequence 1 from Patent WO0200906. 260 e-149 4
(AR343138) Sequence 1 from patent US 6579522. 260 e-149 4
(AF027126) Eukaryotic luciferase expression vector pLUC+, co... 258 e-149 4
(AF027127) Eukaryotic luciferase expression vector pTATALUC+... 258 e-149 4
(AF027128) Eukaryotic luciferase expression vector ptkLUC+, ... 258 e-149 4
(BD312803) Conditional gene trapping construct for the disru... 258 e-149 4
(AX114856) Sequence 16 from Patent WO0129208. 258 e-149 4
(AF027129) Eukaryotic luciferase expression vector pCMVtkLUC... 258 e-149 4
(AX957039) Sequence 2 from Patent WO03097842. 258 e-146 4
(AX957038) Sequence 1 from Patent WO03097842. 258 e-146 4
(EA358931) Sequence 4 from patent US 7288638. 258 e-146 4
(DJ444689) FULLY HUMAN ANTIBODIES AGAINST HUMAN 4-1BB. 258 e-146 4
(DI151164) FULLY HUMAN ANTIBODIES AGAINST HUMAN 4-1BB. 258 e-146 4
(CS077382) Sequence 4 from Patent WO2005035584. 258 e-146 4
(DD292109) HUMANIZED ANTIBODIES AGAINST HUMAN 4-1BB. 258 e-146 4
(AR653603) Sequence 3 from patent US 6887673. 258 e-146 4
(EA358929) Sequence 1 from patent US 7288638. 258 e-146 4
(DJ444687) FULLY HUMAN ANTIBODIES AGAINST HUMAN 4-1BB. 258 e-146 4
(DI155388) FULLY HUMAN ANTIBODIES AGAINST HUMAN 4-1BB. 258 e-146 4
(CS077379) Sequence 1 from Patent WO2005035584. 258 e-146 4
(EA270439) Sequence 23 from patent US 7247302. 258 e-146 4
(BD021875) Method for inhibiting immunoglobulin-induced toxi... 258 e-146 4
(EA270428) Sequence 12 from patent US 7247302. 258 e-146 4
(EA270426) Sequence 10 from patent US 7247302. 258 e-146 4
(BD021864) Method for inhibiting immunoglobulin-induced toxi... 258 e-146 4
(BD021862) Method for inhibiting immunoglobulin-induced toxi... 258 e-146 4
(DI137456) ANTIBODIES AGAINST HUMAN CD40. 258 e-146 4
(BD131045) Antibody against human CD40. 258 e-146 4
(AR216773) Sequence 5 from patent US 6413514. 258 e-146 4
(AR176314) Sequence 5 from patent US 6312693. 258 e-146 4
(EA270438) Sequence 22 from patent US 7247302. 258 e-146 4
(BD021874) Method for inhibiting immunoglobulin-induced toxi... 258 e-146 4
(EA270425) Sequence 9 from patent US 7247302. 258 e-146 4
(BD021861) Method for inhibiting immunoglobulin-induced toxi... 258 e-146 4
(DI136619) ANTIBODIES AGAINST HUMAN CD40. 258 e-146 4
(BD131046) Antibody against human CD40. 258 e-146 4
(AR216774) Sequence 6 from patent US 6413514. 258 e-146 4
(AR176315) Sequence 6 from patent US 6312693. 258 e-146 4
(DD292111) HUMANIZED ANTIBODIES AGAINST HUMAN 4-1BB. 258 e-146 4
(AR653605) Sequence 6 from patent US 6887673. 258 e-146 4
(EA270429) Sequence 13 from patent US 7247302. 258 e-146 4
(EA270427) Sequence 11 from patent US 7247302. 258 e-146 4
(BD021865) Method for inhibiting immunoglobulin-induced toxi... 258 e-146 4
(BD021863) Method for inhibiting immunoglobulin-induced toxi... 258 e-146 4
(BJ343691) Dictyostelium discoideum cDNA clone:dda16i24, 3' ... 525 e-144 1
(DJ047955) Recombinant multivalent vaccine. 258 e-144 4
(DI156303) Recombinant varicella-zoster virus. 258 e-144 4
(DI113011) Recombinant viral vector for gene transfer into l... 258 e-144 4
(DD250387) Recombinant viral vector for gene transfer into l... 258 e-144 4
(DD226426) Recombinant varicella-zoster virus. 258 e-144 4
(BD454377) REPORTER SYSTEM FOR CELL SURFACE RECEPTOR-LIGAND ... 258 e-144 4
(AX528381) Sequence 12 from Patent WO0220749. 258 e-144 4
(BD454376) REPORTER SYSTEM FOR CELL SURFACE RECEPTOR-LIGAND ... 258 e-143 5
(AX528380) Sequence 11 from Patent WO0220749. 258 e-143 5
(AU037434) Dictyostelium discoideum slug cDNA, clone SSD636. 297 e-143 3
(AB062167) Cloning vector pRTHSP70-lacZ gene for beta-galact... 258 e-142 4
(CJ461332) Macaca fascicularis mRNA, clone: QmoA-14245, 5' e... 355 e-141 2
(CJ464240) Macaca fascicularis mRNA, clone: QnpA-12888, 5' e... 355 e-141 2
(AK299794) Homo sapiens cDNA FLJ61373 complete cds, highly s... 355 e-140 2
(AK299638) Homo sapiens cDNA FLJ61367 complete cds, highly s... 355 e-140 2
(AK301951) Homo sapiens cDNA FLJ58301 complete cds. 355 e-140 2
(DJ349978) TARGETS FOR TUMOR GROWTH INHIBITION. 355 e-140 2
(DI124393) TARGETS FOR TUMOR GROWTH INHIBITION. 355 e-140 2
(AK000847) Homo sapiens cDNA FLJ20840 fis, clone ADKA02336. 355 e-140 2
(BD155790) Primer for synthesizing full-length cDNA and use ... 355 e-140 2
(AX875837) Sequence 10742 from Patent EP1074617. 355 e-140 2
(AB172041) Macaca fascicularis brain cDNA clone: QflA-16434,... 355 e-140 2
(AK307303) Homo sapiens cDNA, FLJ97251. 355 e-140 2
(BD101502) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021564) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(CJ434753) Macaca fascicularis mRNA, clone: QccE-11762, 5' e... 355 e-140 2
(CJ434731) Macaca fascicularis mRNA, clone: QccE-11740, 5' e... 355 e-140 2
(CJ435036) Macaca fascicularis mRNA, clone: QccE-12058, 5' e... 355 e-140 2
(CJ434841) Macaca fascicularis mRNA, clone: QccE-11854, 5' e... 355 e-140 2
(CJ435245) Macaca fascicularis mRNA, clone: QccE-12276, 5' e... 355 e-140 2
(CJ435290) Macaca fascicularis mRNA, clone: QccE-12326, 5' e... 355 e-140 2
(CJ470388) Macaca fascicularis mRNA, clone: QnpA-21964, 5' e... 355 e-140 2
(CJ435132) Macaca fascicularis mRNA, clone: QccE-12159, 5' e... 355 e-140 2
(CJ444235) Macaca fascicularis mRNA, clone: QccE-21827, 5' e... 355 e-140 2
(CJ443048) Macaca fascicularis mRNA, clone: QccE-20587, 5' e... 355 e-140 2
(CJ443113) Macaca fascicularis mRNA, clone: QccE-20656, 5' e... 355 e-140 2
(CJ443218) Macaca fascicularis mRNA, clone: QccE-20765, 5' e... 355 e-140 2
(CJ441538) Macaca fascicularis mRNA, clone: QccE-19014, 5' e... 355 e-140 2
(CJ470516) Macaca fascicularis mRNA, clone: QorA-10028, 5' e... 355 e-140 2
(CJ443528) Macaca fascicularis mRNA, clone: QccE-21088, 5' e... 355 e-140 2
(CJ444425) Macaca fascicularis mRNA, clone: QccE-22025, 5' e... 355 e-140 2
(CJ441712) Macaca fascicularis mRNA, clone: QccE-19193, 5' e... 355 e-140 2
(CJ441371) Macaca fascicularis mRNA, clone: QccE-18838, 5' e... 355 e-140 2
(CJ440858) Macaca fascicularis mRNA, clone: QccE-18304, 5' e... 355 e-140 2
(CJ490977) Macaca fascicularis mRNA, clone: QtsA-18790, 5' e... 355 e-140 2
(CJ444500) Macaca fascicularis mRNA, clone: QccE-22104, 5' e... 355 e-140 2
(BD101236) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021298) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(CJ442840) Macaca fascicularis mRNA, clone: QccE-20371, 5' e... 355 e-140 2
(CJ472731) Macaca fascicularis mRNA, clone: QorA-12604, 5' e... 355 e-140 2
(CJ444624) Macaca fascicularis mRNA, clone: QccE-22232, 5' e... 355 e-140 2
(CJ470179) Macaca fascicularis mRNA, clone: QnpA-21711, 5' e... 355 e-140 2
(CJ441873) Macaca fascicularis mRNA, clone: QccE-19362, 5' e... 355 e-140 2
(CJ449321) Macaca fascicularis mRNA, clone: QflA-14833, 5' e... 355 e-140 2
(CJ472637) Macaca fascicularis mRNA, clone: QorA-12495, 5' e... 355 e-140 2
(CJ448358) Macaca fascicularis mRNA, clone: QflA-13729, 5' e... 355 e-140 2
(CJ441771) Macaca fascicularis mRNA, clone: QccE-19256, 5' e... 355 e-140 2
(CJ489918) Macaca fascicularis mRNA, clone: QtsA-17687, 5' e... 355 e-140 2
(CJ442195) Macaca fascicularis mRNA, clone: QccE-19701, 5' e... 355 e-140 2
(CJ441973) Macaca fascicularis mRNA, clone: QccE-19466, 5' e... 355 e-140 2
(CJ472681) Macaca fascicularis mRNA, clone: QorA-12546, 5' e... 355 e-140 2
(CJ442162) Macaca fascicularis mRNA, clone: QccE-19663, 5' e... 355 e-140 2
(BD101409) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD101216) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021471) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(BD021278) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(CJ461778) Macaca fascicularis mRNA, clone: QmoA-14759, 5' e... 355 e-140 2
(CJ458896) Macaca fascicularis mRNA, clone: QmoA-10976, 5' e... 355 e-140 2
(BD101418) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021480) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(BD101219) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021281) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(CJ433521) Macaca fascicularis mRNA, clone: QccE-10474, 5' e... 355 e-140 2
(CJ467204) Macaca fascicularis mRNA, clone: QnpA-16664, 5' e... 355 e-140 2
(CJ451419) Macaca fascicularis mRNA, clone: QflA-17026, 5' e... 355 e-140 2
(CJ467979) Macaca fascicularis mRNA, clone: QnpA-17687, 5' e... 355 e-140 2
(CJ478145) Macaca fascicularis mRNA, clone: QtrA-13151, 5' e... 355 e-140 2
(CJ434372) Macaca fascicularis mRNA, clone: QccE-11361, 5' e... 355 e-140 2
(CJ468535) Macaca fascicularis mRNA, clone: QnpA-18409, 5' e... 355 e-140 2
(CJ486223) Macaca fascicularis mRNA, clone: QtsA-13840, 5' e... 355 e-140 2
(CJ452572) Macaca fascicularis mRNA, clone: QflA-18234, 5' e... 355 e-140 2
(CJ438931) Macaca fascicularis mRNA, clone: QccE-16173, 5' e... 355 e-140 2
(CJ436581) Macaca fascicularis mRNA, clone: QccE-13696, 5' e... 355 e-140 2
(CJ436962) Macaca fascicularis mRNA, clone: QccE-14101, 5' e... 355 e-140 2
(CJ436014) Macaca fascicularis mRNA, clone: QccE-13086, 5' e... 355 e-140 2
(CJ460939) Macaca fascicularis mRNA, clone: QmoA-13773, 5' e... 355 e-140 2
(CJ436135) Macaca fascicularis mRNA, clone: QccE-13215, 5' e... 355 e-140 2
(DA571419) Homo sapiens cDNA clone HEMBA1006568, 5' end, mRN... 355 e-140 2
(CJ438950) Macaca fascicularis mRNA, clone: QccE-16193, 5' e... 355 e-140 2
(CJ436754) Macaca fascicularis mRNA, clone: QccE-13877, 5' e... 355 e-140 2
(CJ435757) Macaca fascicularis mRNA, clone: QccE-12819, 5' e... 355 e-140 2
(CJ460882) Macaca fascicularis mRNA, clone: QmoA-13704, 5' e... 355 e-140 2
(CJ435858) Macaca fascicularis mRNA, clone: QccE-12925, 5' e... 355 e-140 2
(CJ438420) Macaca fascicularis mRNA, clone: QccE-15637, 5' e... 355 e-140 2
(CJ434211) Macaca fascicularis mRNA, clone: QccE-11192, 5' e... 355 e-140 2
(CJ463071) Macaca fascicularis mRNA, clone: QnpA-11125, 5' e... 355 e-140 2
(CJ436606) Macaca fascicularis mRNA, clone: QccE-13725, 5' e... 355 e-140 2
(BD101390) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021452) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(CJ434654) Macaca fascicularis mRNA, clone: QccE-11656, 5' e... 355 e-140 2
(CJ434629) Macaca fascicularis mRNA, clone: QccE-11631, 5' e... 355 e-140 2
(CJ434593) Macaca fascicularis mRNA, clone: QccE-11591, 5' e... 355 e-140 2
(BD101365) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021427) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(CJ464006) Macaca fascicularis mRNA, clone: QnpA-12613, 5' e... 355 e-140 2
(CJ437471) Macaca fascicularis mRNA, clone: QccE-14643, 5' e... 355 e-140 2
(CJ465942) Macaca fascicularis mRNA, clone: QnpA-15201, 5' e... 355 e-140 2
(CJ463650) Macaca fascicularis mRNA, clone: QnpA-12056, 5' e... 355 e-140 2
(CJ475645) Macaca fascicularis mRNA, clone: QorA-15976, 5' e... 355 e-140 2
(CJ465699) Macaca fascicularis mRNA, clone: QnpA-14828, 5' e... 355 e-140 2
(CJ465674) Macaca fascicularis mRNA, clone: QnpA-14802, 5' e... 355 e-140 2
(CJ465754) Macaca fascicularis mRNA, clone: QnpA-14885, 5' e... 355 e-140 2
(CJ434295) Macaca fascicularis mRNA, clone: QccE-11280, 5' e... 355 e-140 2
(CJ436138) Macaca fascicularis mRNA, clone: QccE-13218, 5' e... 355 e-140 2
(CJ434511) Macaca fascicularis mRNA, clone: QccE-11509, 5' e... 355 e-140 2
(CJ475767) Macaca fascicularis mRNA, clone: QorA-16115, 5' e... 355 e-140 2
(CJ463012) Macaca fascicularis mRNA, clone: QnpA-10924, 5' e... 355 e-140 2
(CJ438669) Macaca fascicularis mRNA, clone: QccE-15902, 5' e... 355 e-140 2
(CJ437857) Macaca fascicularis mRNA, clone: QccE-15047, 5' e... 355 e-140 2
(CJ437692) Macaca fascicularis mRNA, clone: QccE-14872, 5' e... 355 e-140 2
(CJ464802) Macaca fascicularis mRNA, clone: QnpA-13659, 5' e... 355 e-140 2
(CJ437786) Macaca fascicularis mRNA, clone: QccE-14970, 5' e... 355 e-140 2
(CJ475295) Macaca fascicularis mRNA, clone: QorA-15577, 5' e... 355 e-140 2
(CJ465293) Macaca fascicularis mRNA, clone: QnpA-14359, 5' e... 355 e-140 2
(CJ465632) Macaca fascicularis mRNA, clone: QnpA-14752, 5' e... 355 e-140 2
(CJ438124) Macaca fascicularis mRNA, clone: QccE-15328, 5' e... 355 e-140 2
(CJ437950) Macaca fascicularis mRNA, clone: QccE-15145, 5' e... 355 e-140 2
(CJ437628) Macaca fascicularis mRNA, clone: QccE-14808, 5' e... 355 e-140 2
(CJ437446) Macaca fascicularis mRNA, clone: QccE-14617, 5' e... 355 e-140 2
(CJ440438) Macaca fascicularis mRNA, clone: QccE-17756, 5' e... 355 e-140 2
(CJ438664) Macaca fascicularis mRNA, clone: QccE-15893, 5' e... 355 e-140 2
(CJ438014) Macaca fascicularis mRNA, clone: QccE-15214, 5' e... 355 e-140 2
(CJ437389) Macaca fascicularis mRNA, clone: QccE-14554, 5' e... 355 e-140 2
(CJ487395) Macaca fascicularis mRNA, clone: QtsA-15060, 5' e... 355 e-140 2
(CJ465760) Macaca fascicularis mRNA, clone: QnpA-14891, 5' e... 355 e-140 2
(CJ437284) Macaca fascicularis mRNA, clone: QccE-14441, 5' e... 355 e-140 2
(CJ434410) Macaca fascicularis mRNA, clone: QccE-11403, 5' e... 355 e-140 2
(CJ464465) Macaca fascicularis mRNA, clone: QnpA-13241, 5' e... 355 e-140 2
(CJ438367) Macaca fascicularis mRNA, clone: QccE-15579, 5' e... 355 e-140 2
(CJ439264) Macaca fascicularis mRNA, clone: QccE-16526, 5' e... 355 e-140 2
(CJ465739) Macaca fascicularis mRNA, clone: QnpA-14870, 5' e... 355 e-140 2
(CJ456584) Macaca fascicularis mRNA, clone: QflA-22425, 5' e... 355 e-140 2
(CJ440424) Macaca fascicularis mRNA, clone: QccE-17742, 5' e... 355 e-140 2
(CJ438372) Macaca fascicularis mRNA, clone: QccE-15584, 5' e... 355 e-140 2
(CJ437743) Macaca fascicularis mRNA, clone: QccE-14927, 5' e... 355 e-140 2
(BM828970) K-EST0101865 S11SNU1 Homo sapiens cDNA clone S11S... 355 e-140 2
(CJ439501) Macaca fascicularis mRNA, clone: QccE-16771, 5' e... 355 e-140 2
(CJ439257) Macaca fascicularis mRNA, clone: QccE-16519, 5' e... 355 e-140 2
(CJ439797) Macaca fascicularis mRNA, clone: QccE-17081, 5' e... 355 e-140 2
(CJ439474) Macaca fascicularis mRNA, clone: QccE-16744, 5' e... 355 e-140 2
(CJ439792) Macaca fascicularis mRNA, clone: QccE-17076, 5' e... 355 e-140 2
(CJ439617) Macaca fascicularis mRNA, clone: QccE-16892, 5' e... 355 e-140 2
(DA571765) Homo sapiens cDNA clone HEMBA1007237, 5' end, mRN... 355 e-140 2
(BD101656) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021718) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(BD101600) Novel genes cloned in humanneuroblastoma and frag... 355 e-140 2
(BD021662) Novel gene and novel gene fragment cloned in huma... 355 e-140 2
(CI286809) Oryza sativa Japonica Group cDNA, clone: 005-M020... 355 e-140 2
(CI285395) Oryza sativa Japonica Group cDNA, clone: 003-M004... 355 e-140 2
(DA770446) Homo sapiens cDNA clone OCBBF2003131, 5' end, mRN... 355 e-140 2
(CI285426) Oryza sativa Japonica Group cDNA, clone: 003-M007... 355 e-140 2
(DA637155) Homo sapiens cDNA clone LIVER1000544, 5' end, mRN... 355 e-140 2
(AU176578) Oryzias latipes cDNA clone:OLa13.05b, similar to ... 355 e-140 2
(DB015399) Homo sapiens cDNA clone TESOP2004443, 5' end, mRN... 355 e-140 2
(CI305637) Oryza sativa Japonica Group cDNA, clone: 013-M008... 355 e-140 2
(DD448989) LENTIVIRAL VECTORS CARRYING SYNTHETIC BI-DIRECTIO... 242 e-139 4
(CQ903982) Sequence 7 from Patent WO2004094642. 242 e-139 4
(DD448986) LENTIVIRAL VECTORS CARRYING SYNTHETIC BI-DIRECTIO... 242 e-139 4
(CQ903979) Sequence 4 from Patent WO2004094642. 242 e-139 4
(DD448988) LENTIVIRAL VECTORS CARRYING SYNTHETIC BI-DIRECTIO... 242 e-139 4
(CQ903981) Sequence 6 from Patent WO2004094642. 242 e-139 4
(AX030368) Sequence 1 from Patent DE19826758. 250 e-139 4
(AR230165) Sequence 1 from patent US 6451563. 250 e-139 4
(CJ433219) Macaca fascicularis mRNA, clone: QccE-10159, 5' e... 351 e-139 2
(CI286669) Oryza sativa Japonica Group cDNA, clone: 005-M008... 355 e-139 2
(DD448987) LENTIVIRAL VECTORS CARRYING SYNTHETIC BI-DIRECTIO... 242 e-139 5
(CQ903980) Sequence 5 from Patent WO2004094642. 242 e-139 5
(DD448990) LENTIVIRAL VECTORS CARRYING SYNTHETIC BI-DIRECTIO... 242 e-139 5
(CQ903983) Sequence 8 from Patent WO2004094642. 242 e-139 5
(DD258380) METHODS OF IDENTIFYING COMPOUNDS THAT MODULATE A ... 258 e-139 4
(CJ441158) Macaca fascicularis mRNA, clone: QccE-18617, 5' e... 355 e-138 2
(CJ470685) Macaca fascicularis mRNA, clone: QorA-10231, 5' e... 355 e-138 2
(AU080263) Mus musculus brain cDNA, clone:MNCb-5435, 5' end. 355 e-138 2
(CJ474654) Macaca fascicularis mRNA, clone: QorA-14801, 5' e... 355 e-138 2
(CJ433524) Macaca fascicularis mRNA, clone: QccE-10477, 5' e... 355 e-138 2
(BD101359) Novel genes cloned in humanneuroblastoma and frag... 349 e-138 2
(BD021421) Novel gene and novel gene fragment cloned in huma... 349 e-138 2
(CJ454841) Macaca fascicularis mRNA, clone: QflA-20601, 5' e... 355 e-138 2
(CJ436825) Macaca fascicularis mRNA, clone: QccE-13953, 5' e... 355 e-138 2
(CJ465410) Macaca fascicularis mRNA, clone: QnpA-14503, 5' e... 355 e-138 2
(CJ434569) Macaca fascicularis mRNA, clone: QccE-11567, 5' e... 355 e-138 2
(CJ463511) Macaca fascicularis mRNA, clone: QnpA-11851, 5' e... 349 e-138 2
(DA571638) Homo sapiens cDNA clone HEMBA1006987, 5' end, mRN... 355 e-138 2
(CJ464066) Macaca fascicularis mRNA, clone: QnpA-12682, 5' e... 355 e-138 2
(CJ465531) Macaca fascicularis mRNA, clone: QnpA-14644, 5' e... 355 e-138 2
(BD100337) Novel genes cloned in humanneuroblastoma and frag... 349 e-138 2
(BD020399) Novel gene and novel gene fragment cloned in huma... 349 e-138 2
(DA571418) Homo sapiens cDNA clone HEMBA1006564, 5' end, mRN... 349 e-138 2
(DA950316) Homo sapiens cDNA clone SPLEN2027264, 5' end, mRN... 349 e-138 2
(DA113004) Homo sapiens cDNA clone BRACE3031098, 5' end, mRN... 349 e-138 2
(DB225903) Homo sapiens cDNA clone TRACH3017975, 5' end, mRN... 349 e-138 2
(DB086342) Homo sapiens cDNA clone TESTI4033931, 5' end, mRN... 349 e-138 2
(DA415720) Homo sapiens cDNA clone BRTHA3024612, 5' end, mRN... 349 e-138 2
(AK300226) Homo sapiens cDNA FLJ50211 complete cds, highly s... 347 e-138 2
(AK291590) Homo sapiens cDNA FLJ78022 complete cds, highly s... 347 e-138 2
(CJ434808) Macaca fascicularis mRNA, clone: QccE-11821, 5' e... 355 e-138 2
(CJ469786) Macaca fascicularis mRNA, clone: QnpA-21060, 5' e... 347 e-138 2
(CJ441840) Macaca fascicularis mRNA, clone: QccE-19329, 5' e... 347 e-138 2
(CJ441723) Macaca fascicularis mRNA, clone: QccE-19208, 5' e... 355 e-138 2
(CJ433072) Macaca fascicularis mRNA, clone: QccE-10008, 5' e... 355 e-138 2
(CJ442411) Macaca fascicularis mRNA, clone: QccE-19926, 5' e... 355 e-138 2
(CJ448128) Macaca fascicularis mRNA, clone: QflA-13487, 5' e... 355 e-138 2
(CJ468409) Macaca fascicularis mRNA, clone: QnpA-18266, 5' e... 347 e-138 2
(CJ461992) Macaca fascicularis mRNA, clone: QmoA-15022, 5' e... 355 e-138 2
(CJ436415) Macaca fascicularis mRNA, clone: QccE-13526, 5' e... 355 e-138 2
(CJ466523) Macaca fascicularis mRNA, clone: QnpA-15901, 5' e... 355 e-138 2
(CJ436679) Macaca fascicularis mRNA, clone: QccE-13802, 5' e... 355 e-138 2
(CJ475343) Macaca fascicularis mRNA, clone: QorA-15635, 5' e... 355 e-138 2
(CJ438466) Macaca fascicularis mRNA, clone: QccE-15683, 5' e... 347 e-138 2
(CJ464263) Macaca fascicularis mRNA, clone: QnpA-12930, 5' e... 347 e-138 2
(DA834033) Homo sapiens cDNA clone PLACE2000463, 5' end, mRN... 347 e-138 2
(CJ438725) Macaca fascicularis mRNA, clone: QccE-15958, 5' e... 355 e-138 2
(CJ437179) Macaca fascicularis mRNA, clone: QccE-14332, 5' e... 355 e-138 2
(CJ439776) Macaca fascicularis mRNA, clone: QccE-17060, 5' e... 347 e-138 2
(CJ439144) Macaca fascicularis mRNA, clone: QccE-16401, 5' e... 355 e-138 2
(CJ439124) Macaca fascicularis mRNA, clone: QccE-16377, 5' e... 345 e-138 2
(CI286691) Oryza sativa Japonica Group cDNA, clone: 005-M010... 347 e-138 2
(DA447165) Homo sapiens cDNA clone CTONG2018447, 5' end, mRN... 347 e-138 2
(DA397683) Homo sapiens cDNA clone BRTHA2037945, 5' end, mRN... 347 e-138 2
(DA107495) Homo sapiens cDNA clone BRACE3022264, 5' end, mRN... 347 e-138 2
(DA021865) Homo sapiens cDNA clone ASTRO2003672, 5' end, mRN... 347 e-138 2
(DA909459) Homo sapiens cDNA clone SKNSH2002040, 5' end, mRN... 347 e-138 2
(CI285524) Oryza sativa Japonica Group cDNA, clone: 003-M014... 347 e-138 2
(DA407809) Homo sapiens cDNA clone BRTHA3013574, 5' end, mRN... 347 e-138 2
(DA796336) Homo sapiens cDNA clone OCBBF2037533, 5' end, mRN... 347 e-138 2

>(BJ344667) Dictyostelium discoideum cDNA clone:dda20h06, 3' end,
single read.
Length = 780

Score = 1072 bits (541), Expect(2) = 0.0
Identities = 541/541 (100%)
Strand = Plus / Minus


Query: 1018 tggtgaagaatttattattgaaattccacaaaatgaaactttagaaattaaagttgatac 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggtgaagaatttattattgaaattccacaaaatgaaactttagaaattaaagttgatac 561


Query: 1078 acacccaaggtcttccaatgatgatgtatctactgcagagatggaagttgaagcattgaa 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acacccaaggtcttccaatgatgatgtatctactgcagagatggaagttgaagcattgaa 501


Query: 1138 aacaccattgtttgctgaaactacatttgtaacaaaacaacaagtaatcacaaataaaaa 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacaccattgtttgctgaaactacatttgtaacaaaacaacaagtaatcacaaataaaaa 441


Query: 1198 gctattggtgtacaaacaaagtgatttctttccaaatatgacaacattattacaaagtag 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gctattggtgtacaaacaaagtgatttctttccaaatatgacaacattattacaaagtag 381


Query: 1258 attgaaagatgtaacagtccaagaagtaaaagaccctactaaaattgggttaaatgataa 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attgaaagatgtaacagtccaagaagtaaaagaccctactaaaattgggttaaatgataa 321


Query: 1318 tagctatagtgtaggtgattttgaaaatgtttttgtattatatgctgtctcttgtatggg 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagctatagtgtaggtgattttgaaaatgtttttgtattatatgctgtctcttgtatggg 261


Query: 1378 tgctagaactgattccgaaagagatgctttcaaaattaaatcaattcgttcaataattgg 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgctagaactgattccgaaagagatgctttcaaaattaaatcaattcgttcaataattgg 201


Query: 1438 tgacaaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaat 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgacaaagttccaatcatctatggtgtatttatgattggaaagaatggaccaactagaat 141


Query: 1498 taaagttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcg 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 taaagttgaacatactcaaacctctatctcaatcactcattcaatgagtgatatcggtcg 81


Query: 1558 t 1558
|
Sbjct: 80 t 80

Score = 52.0 bits (26), Expect(2) = 0.0
Identities = 29/30 (96%)
Strand = Plus / Minus


Query: 882 atggtgaaatttttattattgaaattcccc 911
||||||||| ||||||||||||||||||||
Sbjct: 756 atggtgaaaattttattattgaaattcccc 727

Score = 281 bits (142), Expect(3) = 1e-74
Identities = 142/142 (100%)
Strand = Plus / Minus


Query: 1917 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atcaattcgttcaataattggtgacaaagttccaatcatctatggtgtatttatgattgg 162


Query: 1977 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aaagaatggaccaactagaattaaagttgaacatactcaaacctctatctcaatcactca 102


Query: 2037 ttcaatgagtgatatcggtcgt 2058
||||||||||||||||||||||
Sbjct: 101 ttcaatgagtgatatcggtcgt 80

Score = 34.2 bits (17), Expect(3) = 1e-74
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 893 tttattattgaaattcc 909
|||||||||||||||||
Sbjct: 610 tttattattgaaattcc 594

Score = 32.2 bits (16), Expect(3) = 1e-74
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 629 aaactagaagaaaaacaaaa 648
||||||||||| ||||||||
Sbjct: 643 aaactagaagataaacaaaa 624

Score = 40.1 bits (20), Expect(2) = 0.068
Identities = 41/51 (80%)
Strand = Plus / Minus


Query: 2551 agtaatcncnaatannnagctattggtgtncncncanagtgatttctttcc 2601
||||||| | |||| |||||||||||| | || ||||||||||||||
Sbjct: 458 agtaatcacaaataaaaagctattggtgtacaaacaaagtgatttctttcc 408

Score = 38.2 bits (19), Expect(2) = 0.068
Identities = 25/27 (92%)
Strand = Plus / Minus


Query: 1018 tggtgaagaatttattattgaaattcc 1044
||||||| | |||||||||||||||||
Sbjct: 755 tggtgaaaattttattattgaaattcc 729

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,461,693,349
Number of extensions: 154471455
Number of successful extensions: 12515676
Number of sequences better than 10.0: 80462
Length of query: 2601
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2576
Effective length of database: 96,311,147,814
Effective search space: 248097516768864
Effective search space used: 248097516768864
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15642-1 (Contig-U15642-1Q) /CSM_Contig/Contig-U15642-1Q.Seq.d
(2601 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AB172041_1(AB172041|pid:none) Macaca fascicularis brain cDNA clo... 100 3e-19
AF168994_4(AF168994|pid:none) Simian virus 40 strain T302, compl... 50 4e-04
M24873_1(M24873|pid:none) Simian virus SV40 major structural pro... 50 4e-04
DQ660375_5(DQ660375|pid:none) Simian virus 40 isolate sv-imb, co... 50 4e-04
AF316139_4(AF316139|pid:none) Simian virus 40 strain 776 complet... 50 4e-04
AF038616_4(AF038616|pid:none) Simian virus 40 strain K661, compl... 50 4e-04
M99353_1(M99353|pid:none) Rhesus macaque polyoma virus major str... 50 4e-04
CS468497_2(CS468497|pid:none) Sequence 11 from Patent EP1746106. 45 0.010
AB004487_1(AB004487|pid:none) JC polyomavirus genes for VP1, lar... 39 1.3
AE014187_162(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 39 1.3
C24707_1(C24707|pid:none) JC virus gene for VP1 and large T anti... 38 1.6
AB167854_1(AB167854|pid:none) JC virus genes for VP1, large T an... 38 2.1
AY614708_4(AY614708|pid:none) Simian agent 12, complete genome. 38 2.1
AB167859_1(AB167859|pid:none) JC virus genes for VP1, large T an... 38 2.1
AY148414_1(AY148414|pid:none) JC polyomavirus isolate IN8 VP1 an... 38 2.1
(Q1W5X1) RecName: Full=Major capsid protein VP1; AltName: Full=M... 38 2.1
AB074582_4(AB074582|pid:none) JC virus DNA, complete genome, iso... 38 2.1
AB305153_1(AB305153|pid:none) JC polyomavirus gene for VP1, larg... 38 2.1
AB183539_4(AB183539|pid:none) JC polyomavirus gene for agnoprote... 38 2.1
D11365_1(D11365|pid:none) JC polyomavirus gene for VP1, complete... 38 2.1
AB183540_4(AB183540|pid:none) JC polyomavirus gene for agnoprote... 38 2.1
EF369496_1(EF369496|pid:none) JC polyomavirus isolate 4 VP1 gene... 38 2.1
AB004468_1(AB004468|pid:none) JC polyomavirus genes for VP1, lar... 38 2.1
EF369494_1(EF369494|pid:none) JC polyomavirus isolate 2 VP1 gene... 38 2.1
AB126988_4(AB126988|pid:none) JC polyomavirus DNA, complete geno... 38 2.1
AB004498_1(AB004498|pid:none) JC polyomavirus genes for VP1, lar... 38 2.1
AB074575_4(AB074575|pid:none) JC virus DNA, complete genome, iso... 38 2.1
AB127345_4(AB127345|pid:none) JC polyomavirus DNA, complete geno... 38 2.1
EF369498_1(EF369498|pid:none) JC polyomavirus isolate 6 VP1 gene... 38 2.1
AY148419_1(AY148419|pid:none) JC polyomavirus isolate IN23 VP1 a... 38 2.1
D88606_1(D88606|pid:none) JC polyomavirus genes for VP1, large T... 37 2.8
AF396427_4(AF396427|pid:none) JC polyomavirus strain 732A agnopr... 37 2.8
FJ524337_1(FJ524337|pid:none) JC polyomavirus isolate RJ/2005-11... 37 2.8
AB074585_4(AB074585|pid:none) JC virus DNA, complete genome, iso... 37 2.8
C24714_1(C24714|pid:none) JC virus gene for VP1 and large T anti... 37 2.8
AF295739_4(AF295739|pid:none) JC virus strain 703C agnoprotein, ... 37 2.8
AB167895_1(AB167895|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB048575_4(AB048575|pid:none) JC virus DNA, complete genome, iso... 37 2.8
C24736_1(C24736|pid:none) JC virus gene for VP1 and large T anti... 37 2.8
AB167833_1(AB167833|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB048560_4(AB048560|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AB074581_4(AB074581|pid:none) JC virus DNA, complete genome, iso... 37 2.8
EF369502_1(EF369502|pid:none) JC polyomavirus isolate 10 VP1 gen... 37 2.8
EF369503_1(EF369503|pid:none) JC polyomavirus isolate 11 VP1 gen... 37 2.8
AF281611_4(AF281611|pid:none) JC virus strain 405 agnoprotein, V... 37 2.8
AB167860_1(AB167860|pid:none) JC virus genes for VP1, large T an... 37 2.8
AF281619_4(AF281619|pid:none) JC virus strain 238A agnoprotein, ... 37 2.8
AB048563_4(AB048563|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AU078505_1(AU078505|pid:none) JC polyomavirus genes for VP1, lar... 37 2.8
AB077868_4(AB077868|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AF119352_1(AF119352|pid:none) JC virus isolate PRETORIA3 VP1 and... 37 2.8
AB167840_1(AB167840|pid:none) JC virus genes for VP1, large T an... 37 2.8
EF369501_1(EF369501|pid:none) JC polyomavirus isolate 9 VP1 gene... 37 2.8
AB038255_4(AB038255|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
AU078510_1(AU078510|pid:none) JC polyomavirus genes for VP1, lar... 37 2.8
C99969_1(C99969|pid:none) JC virus gene for VP1 and large T anti... 37 2.8
AB167824_1(AB167824|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB127352_4(AB127352|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
FJ524351_1(FJ524351|pid:none) JC polyomavirus isolate RJ/2005-10... 37 2.8
EF369504_1(EF369504|pid:none) JC polyomavirus isolate 12 VP1 gen... 37 2.8
AY536241_4(AY536241|pid:none) JC virus isolate SA296_02 genotype... 37 2.8
EU787002_1(EU787002|pid:none) JC polyomavirus isolate SA33336_04... 37 2.8
AB048555_4(AB048555|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AB127343_4(AB127343|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
AB167862_1(AB167862|pid:none) JC virus genes for VP1, large T an... 37 2.8
AF281625_4(AF281625|pid:none) JC polyomavirus strain 803A agnopr... 37 2.8
D88607_1(D88607|pid:none) JC polyomavirus genes for large T anti... 37 2.8
C24752_1(C24752|pid:none) JC virus gene for VP1 and large T anti... 37 2.8
AF281604_4(AF281604|pid:none) JC virus strain 232D agnoprotein, ... 37 2.8
AB077920_1(AB077920|pid:none) JC virus genes for VP1, large T an... 37 2.8
C24730_1(C24730|pid:none) JC virus gene for VP1 and large T anti... 37 2.8
AB004469_1(AB004469|pid:none) JC polyomavirus genes for VP1, lar... 37 2.8
AY536239_4(AY536239|pid:none) JC virus isolate SA21_01 genotype ... 37 2.8
AB048566_4(AB048566|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AB362359_4(AB362359|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
AF281624_4(AF281624|pid:none) JC polyomavirus strain 802B agnopr... 37 2.8
AB167829_1(AB167829|pid:none) JC virus genes for VP1, large T an... 37 2.8
FJ524356_1(FJ524356|pid:none) JC polyomavirus isolate RJ/2005-11... 37 2.8
AB081602_4(AB081602|pid:none) JC virus DNA, complete genome, iso... 37 2.8
FJ524349_1(FJ524349|pid:none) JC polyomavirus isolate RJ/2005-36... 37 2.8
AB167830_1(AB167830|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB305135_1(AB305135|pid:none) JC polyomavirus gene for VP1, larg... 37 2.8
FJ524336_1(FJ524336|pid:none) JC polyomavirus isolate RJ/2005-86... 37 2.8
AU078526_1(AU078526|pid:none) JC polyomavirus genes for VP1, lar... 37 2.8
AB081030_4(AB081030|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AB113126_4(AB113126|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
AB038249_4(AB038249|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
AY536240_4(AY536240|pid:none) JC virus isolate SA84_00 genotype ... 37 2.8
AF119346_1(AF119346|pid:none) JC virus isolate BCN2 VP1 and larg... 37 2.8
AF119354_1(AF119354|pid:none) JC virus isolate CSFB VP1 and larg... 37 2.8
AB167839_1(AB167839|pid:none) JC virus genes for VP1, large T an... 37 2.8
AF119348_1(AF119348|pid:none) JC virus isolate BCN8 VP1 and larg... 37 2.8
AB061025_1(AB061025|pid:none) JC virus genes for VP1 and T antig... 37 2.8
AB004474_1(AB004474|pid:none) JC polyomavirus genes for VP1, lar... 37 2.8
AF281609_4(AF281609|pid:none) JC virus strain 403 agnoprotein, V... 37 2.8
FJ524365_1(FJ524365|pid:none) JC polyomavirus isolate RJ/2005-11... 37 2.8
AB118233_4(AB118233|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AF300956_4(AF300956|pid:none) JC polyomavirus strain 731B, compl... 37 2.8
AB167850_1(AB167850|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB048576_4(AB048576|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AB167831_1(AB167831|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB167837_1(AB167837|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB167828_1(AB167828|pid:none) JC virus genes for VP1, large T an... 37 2.8
AB077914_1(AB077914|pid:none) JC virus genes for VP1, large T an... 37 2.8
C24727_1(C24727|pid:none) JC virus gene for VP1 and large T anti... 37 2.8
AB167888_1(AB167888|pid:none) JC virus genes for VP1, large T an... 37 2.8
FJ524346_1(FJ524346|pid:none) JC polyomavirus isolate RJ/2005-99... 37 2.8
C22720_1(C22720|pid:none) JC polyomavirus gene for VP1, large T ... 37 2.8
FJ524362_1(FJ524362|pid:none) JC polyomavirus isolate RJ/2005-11... 37 2.8
AB185187_1(AB185187|pid:none) JC polyomavirus genes for VP1, lar... 37 2.8
AF396434_4(AF396434|pid:none) JC virus #810B; WF4 agnoprotein, V... 37 2.8
AB048565_4(AB048565|pid:none) JC virus DNA, complete genome, iso... 37 2.8
AB126992_4(AB126992|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
AF281616_4(AF281616|pid:none) JC polyomavirus strain 705C agnopr... 37 2.8
AF281626_4(AF281626|pid:none) JC polyomavirus strain 804A agnopr... 37 2.8
AY376829_4(AY376829|pid:none) JC virus isolate 323A, complete ge... 37 2.8
AB167843_1(AB167843|pid:none) JC virus genes for VP1, large T an... 37 2.8
FJ524339_1(FJ524339|pid:none) JC polyomavirus isolate RJ/2005-10... 37 2.8
AF281621_4(AF281621|pid:none) JC virus strain 240A agnoprotein, ... 37 2.8
D11363_1(D11363|pid:none) JC polyomavirus gene for VP1, complete... 37 2.8
AB113141_4(AB113141|pid:none) JC polyomavirus DNA, complete geno... 37 2.8
AU078512_1(AU078512|pid:none) JC polyomavirus genes for VP1, lar... 37 2.8
AB167835_1(AB167835|pid:none) JC virus genes for VP1, large T an... 37 2.8
AF396426_4(AF396426|pid:none) JC virus #254E; SI30 agnoprotein, ... 37 2.8
FJ524352_1(FJ524352|pid:none) JC polyomavirus isolate RJ/2005-11... 37 2.8
AB167847_1(AB167847|pid:none) JC virus genes for VP1, large T an... 37 2.8
AF281602_4(AF281602|pid:none) JC virus strain 128B agnoprotein, ... 37 2.8
AB263925_4(AB263925|pid:none) BK polyomavirus DNA, complete geno... 37 3.6
DQ989811_4(DQ989811|pid:none) BK polyomavirus isolate PittVR7, c... 37 3.6
AF303945_1(AF303945|pid:none) JC virus isolate E2 VP1 and large ... 37 3.6
AB298945_4(AB298945|pid:none) BK polyomavirus DNA, complete geno... 37 3.6
DQ366598_1(DQ366598|pid:none) BK polyomavirus isolate PA VP1 gen... 37 3.6
AB185197_1(AB185197|pid:none) JC polyomavirus genes for VP1, lar... 37 3.6
AB301087_4(AB301087|pid:none) BK polyomavirus DNA, complete geno... 37 3.6
AB211372_4(AB211372|pid:none) BK polyomavirus DNA, complete geno... 37 3.6
AB217918_4(AB217918|pid:none) BK polyomavirus DNA, complete geno... 37 3.6
AB217917_4(AB217917|pid:none) BK polyomavirus DNA, complete geno... 37 3.6
AB211387_4(AB211387|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
DQ989796_4(DQ989796|pid:none) BK polyomavirus isolate PittVR2, c... 37 4.8
AB260033_4(AB260033|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AY628231_4(AY628231|pid:none) BK polyomavirus isolate BKV CAP-m2... 37 4.8
AX135827_1(AX135827|pid:none) Sequence 15 from Patent WO0132851. 37 4.8
DQ989808_4(DQ989808|pid:none) BK polyomavirus isolate PittVR10, ... 37 4.8
AY628230_4(AY628230|pid:none) BK polyomavirus isolate BKV CAP-m1... 37 4.8
AB365150_4(AB365150|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
(P03088) RecName: Full=Major capsid protein VP1; AltName: Full=M... 37 4.8
AB211373_4(AB211373|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AB301094_4(AB301094|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AY628238_4(AY628238|pid:none) BK polyomavirus isolate BKV HI-u8,... 37 4.8
AB269828_4(AB269828|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AX135823_1(AX135823|pid:none) Sequence 11 from Patent WO0132851. 37 4.8
AX135442_1(AX135442|pid:none) Sequence 20 from Patent WO0132684.... 37 4.8
AB269834_4(AB269834|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AB211390_4(AB211390|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AB269827_4(AB269827|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AX135431_1(AX135431|pid:none) Sequence 9 from Patent WO0132684. 37 4.8
AX135144_1(AX135144|pid:none) Sequence 5 from Patent WO0132852. 37 4.8
(P14996) RecName: Full=Major capsid protein VP1; AltName: Full=M... 37 4.8
AB269841_4(AB269841|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
VVVP1B(E03632;E36762;A03625)coat protein VP1 - polyomavirus BK 37 4.8
AB211371_4(AB211371|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AX135817_1(AX135817|pid:none) Sequence 5 from Patent WO0132851. 37 4.8
AB369093_4(AB369093|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AX135425_1(AX135425|pid:none) Sequence 3 from Patent WO0132684. ... 37 4.8
AB263920_4(AB263920|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
DQ989813_4(DQ989813|pid:none) BK polyomavirus isolate PittNP1, c... 37 4.8
AX135440_1(AX135440|pid:none) Sequence 18 from Patent WO0132684. 37 4.8
FJ548570_1(FJ548570|pid:none) Synthetic construct VP1 (VP1) gene... 37 4.8
V01109_1(V01109|pid:none) Human BK virus (strain MM) genome. (Cl... 37 4.8
AB301101_4(AB301101|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AB260030_4(AB260030|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AY628225_4(AY628225|pid:none) BK polyomavirus isolate BKV HI-u5,... 37 4.8
AY628237_4(AY628237|pid:none) BK polyomavirus isolate BKV HI-u6,... 37 4.8
DQ989807_4(DQ989807|pid:none) BK polyomavirus isolate PittVR9, c... 37 4.8
AX135825_1(AX135825|pid:none) Sequence 13 from Patent WO0132851. 37 4.8
AB211386_4(AB211386|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AX135833_1(AX135833|pid:none) Sequence 21 from Patent WO0132851. 37 4.8
AB263922_4(AB263922|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AY628233_4(AY628233|pid:none) BK polyomavirus isolate BKV CAP-m9... 37 4.8
AB263916_4(AB263916|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AB211391_4(AB211391|pid:none) BK polyomavirus DNA, complete geno... 37 4.8
AY628224_4(AY628224|pid:none) BK polyomavirus isolate BKV CAP-m1... 36 6.2

>AB172041_1(AB172041|pid:none) Macaca fascicularis brain cDNA clone:
QflA-16434, similar to human metallothionein 1J (MT1J),
mRNA, RefSeq: NM_175622.2.
Length = 86

Score = 100 bits (249), Expect = 3e-19
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +3

Query: 1770 IMVTNKAIASQISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPL 1916
IMVTNKAIASQISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPL
Sbjct: 13 IMVTNKAIASQISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPL 61

Score = 100 bits (249), Expect = 3e-19
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +2

Query: 2270 IMVTNKAIASQISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPL 2416
IMVTNKAIASQISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPL
Sbjct: 13 IMVTNKAIASQISQIKHFFHCILVVVCPNSSMYLIMSGSPGTELELIPL 61

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,982,345,846
Number of extensions: 61748742
Number of successful extensions: 156900
Number of sequences better than 10.0: 182
Number of HSP's gapped: 156517
Number of HSP's successfully gapped: 363
Length of query: 867
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 729
Effective length of database: 604,535,722
Effective search space: 440706541338
Effective search space used: 440706541338
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.96 gvh: 0.65 alm: 0.33 top: 0.67 tms: 0.00 mit: 0.32 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

28.0 %: cytoplasmic
24.0 %: mitochondrial
20.0 %: extracellular, including cell wall
20.0 %: nuclear
4.0 %: vacuolar
4.0 %: endoplasmic reticulum

>> prediction for Contig-U15642-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 11
SL (DIR, L) 0
SS (DIR, S) 5
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0