Contig-U15624-1
Contig ID Contig-U15624-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15624-1 (Contig-U15624-1Q) /CSM_Contig/Contig-U15624-1Q.Seq.d
TCCCCGCGCGCTGCCCGATTCATTAATTCAGCTGGCACCACAGCTTTCCC
CACTGGCAATCGGGCAGTGAGCGCAACGCAATTCATGTGAGTTATCTCAC
TCATTAGGCACCCCAGGCTATACACTATATGCTTCCGGCTCGTATGTTGT
GTGGAATTCTGAGCGGATCACAATTTCACACAGGAAACAGCTATCACCAT
GATTACGCCAACTCTAATACGACTCACTATAGGGAAAGCTGCTACGCCTG
CAGGTACCGGTCCGGAATTCCCGGGAAAGGTTATTCATATTGGTGGTCAA
AAATGTTAAGTGGTGATCCTCCAACAGTATCATCAACACTAGCAGCACTA
ACATCAGCAACAATTCAACAAAATAATCAAAATAATCAAAATAATCAAAA
TAATAATAATAATAATAATAATAATCAAAATAATAATAATAATAATAATA
ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCAAAAT
AATATACCAGTACCACCTCCACCACCACCAACTTCAAATGATCCAGCTAA
TATTGTACATTTAACACCAATGATGGCAAGAGGATGGTTTTCAGTTTTAT
TCTCACAATTGGAATTAGATAAAAATGATAATTTAAATTTCTTTATTCAA
CCACCTCAATCACCAAAATTAAAACCACAACCATTGCCATTTAATATTCG
TAGTAATACAATATCATCAAATAATGGTAGTAATGTACCAACCACTGTTA
CTACAACTGCAACTTCAACTCCTATACCAATTATTATTGACATACCAATG
CATGAAATTAGTCCAATTTCTTCCTCTTCTTCTTCTTCTTCTACTCCTTC
TACTTCATCATCATCAAAAAGTAATAATAATTATAATTATGGTTATAAAA
AACCAAATGAATCACAAATTAATAGAATTTTGAAATCTTTAGATAAATGT
TGTGAAACTGGTGAATTTTATTTAATTAGTGGTTTATTAGTATCAATTTT
ACAATTACAAGATTTTTTATTATCAATTGGTATTGATGAAGCTTCAACAA
ATTATCCATATAATCAAAATCACCATAATCATGGTGGTGGTAATGGGAAT
GGTGGAGGAGGAGGTGACATACCAATGCATGAAATTAGTCCAATTTCTTC
CTCTTCTTCTTCTTCTTCTACTCCTTCTACTTCATCATCATCAAAAAGTA
ATAATAATTATAATTATGGTTATAAAAAACCAAATGAATCACAAATTAAT
AGAATTTTGAAATCTTTAGATAAATGTTGTGAAACTGGTGAATTTTATTT
AATTAGTGGTTTATTAGTATCAATTTTACAATTACAAGATTTTTTATTAT
CAATTGGTATTGATGAAGCTTCAACAAATTATCCATATAATCAAAATCAC
CATAATCATGGTGGTGGTAATGGGAATGGTGGAGGAGGAGGTACAAATGT
TAATGGTTCCAATAATAGTGGTAATCAAAATTCTTCACAAAATTCAATTT
ATTATCCAATTTATAGTATTTTAAAATCATTTAATCCAAATAAACAACAA
TGTAATAGGGAATTAATTGATAAAATTCAAACATATGAGAGTATGAATGG
TATTGAATTTTCAAGTAATAATTCAAATGTTGGTGGTGGTGGATATCAAC
AAGCTCATCAATTTGTACCAGAATTTAATTTAAGAAGATCAACAATGGAA
TCTTCAATTCGTATATTTAATTATCATAATCATAATCAACAGAATAATGC
ATTCACTCAAACAAATCATTATGTATCTGTACCAAATTTATCACCAAGCA
ATAGTACCTTTAATTTAAAGAATGAATGTCAATTTTGTAATGTTTTCGCT
GTTAATCCACCAACTTTTGGTGATGAAAAATTGAATAGAGTTGTAAAGAA
ATGTTTTTCACTTTTACTTTTAATTCATAAAGATAAATCAAATAAAATTT
TAAAACAACAATTTTAATTAATAATTTTTATAATAATAATAAAAAAAAAA
AAAGGCGCTTCACCCCCTATACA----------CATTGGTACATTGTGGT
ACAGATGTCCAAGATTGGGCGATTTGTAGTGGAGATGAAAAAACTTTAAA
CCATTATAATGAAAAGAGTGAAATTTACTCACTAGGAATAATTTTATGGG
AGTTGATTTGTATTGCAATGACAGGAACNTACGTTTCACCAAAGATAGCA
TTATTTCAAAATGAAGTTGATTTTTCAATTTGGATTCACAAGGATTACAG
ATTTTCATTTCCAATTGGAACACCACAATCATTAGTAAAATTAATTACAA
GTATGTGTTTACCATGTAGAGACAGAAGACCAACGGTACACCAAATACTT
GATGAAGTTGGAATTATTGAAACAGAATTTCTTTCAAATAGAGGTATTAA
AGGTGAACAAACTTATAGTGGTCTTGAATGTTGGAGAGAATTTAACTTTT
CAAAGCAAAATGTATTTGGAATTTCAATTTCAAATTTACACGATACAGAA
TATAAAGCAGTTAATAAATATAATTATACAAGTTACAATAATAAAAACTC
ATTATTAATGAAACGATATTTGGATAATTCCAACTTTGTGGTAGAATTAA
TCAATCCAAATGGTATATTTAAGTTCAAGTCTTTTTTCGAAAAAGAGAAA
CTTTTATATTTAAAATTAAAATCAACATATAAAGGTGAATATTATTTTGA
TATGGGTAAATTCTTAACAACAATCATTCAAATACATCAAATAACTGAAA
TATATTATAAAATGTTACAAAAATATAGAGAGCTTGGTTTGTTAAGAAAT
AATAATAATAATATTAATAATAATAATAATAATAACAATAATTGCAATAA
TAGTAAAAAATTTAAAACAACATCAGAATCAACATCTGCATTAGGATCAG
ATGCATCATCATCATCGTCACCATCGTCATCATCACCATCACCAAAATAT
TCGGCATCAATCTATCATCACCAATGATTTAAAAATCTTTTTTAAAGTAA
AATAAATTTAATTTTTGTAAATCATCTTATCAACTGTCCAAATAGTTGAT
CATTCTAAAAAATAAATAAATAAATCATATAAATAAATTAAAAATTTATA
CAAATATAAAATAAATAAACTAAAAATCAAATAAATAAAAATGTTTTATT
AATAAAAAA

Gap gap included
Contig length 3149
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 19
Number of EST 26
Link to clone list U15624
List of clone(s)

est1=AFJ262F,-113,453
est2=SLJ688X,1,649
est3=SLJ565F,223,525
est4=SLJ688F,292,525
est5=SSC528F,335,899
est6=AFI450F,565,745
est7=AFI450H,788,1441
est8=AFI450Z,1268,1960
est9=SSC528Z,1382,2023
est10=SLJ565Z,1862,2014
est11=AHJ123Z,2024,2808
est12=AHB316Z,2082,2773
est13=SHL802Z,2325,3087
est14=CHM283Z,2334,3088
est15=SSI572E,2365,3145
est16=AHH468Z,2370,3135
est17=AHA256Z,2381,3135
est18=AHA484Z,2382,3151
est19=SHA380Z,2385,3134
est20=SHF302Z,2412,3134
est21=AFJ262Z,2434,3132
est22=AHN826Z,2450,3060
est23=AHP187Z,2527,3143
est24=SHH113Z,2528,3139
est25=SHB758Z,2551,3144
est26=SLJ688Z,2883,3146
Translated Amino Acid sequence
pralpdsliqlapqlsplaigq*aqrnscelshslgtpgytlyasgsyvvwnseritish
rkqlsp*lrql*ydsl*gkllrlqvpvrnsrerlfilvvknvkw*ssnsiintsstnisn
nstk*sk*sk*sk********sk*********************sk*ytsttstttnfk*
ss*yctfntndgkrmvfsfiltigir*k**fkflysttsitkiktttiai*ys**yniik
*w**ctnhcyyncnfnsytnyy*htna*n*snfflfffffysfyfiiikk***l*lwl*k
tk*itn**nfeifr*ml*nw*ilfn*wfisinftitrffiinwy**sfnklsi*sksp*s
www*wewwrrr*htna*n*snfflfffffysfyfiiikk***l*lwl*ktk*itn**nfe
ifr*ml*nw*ilfn*wfisinftitrffiinwy**sfnklsi*sksp*swww*wewwrrr
ykc*wfq**w*skfftkfnllsnl*yfkii*sk*ttm**gin**nsni*eyewy*ifk**
fkcwwwwistsssictri*fkkinngifnsyi*ls*s*ste*cihsnkslcictkfitkq
*yl*fke*msil*cfrc*stnfw**kie*sckemfftftfns*r*ik*NFKTTILINNFY
NNNKKKKRRFTPYT---

---LVHCGTDVQDWAICSGDEKTLNHYNEKSEIYSLGIILWELICIAMTGTYVSPKIALF
QNEVDFSIWIHKDYRFSFPIGTPQSLVKLITSMCLPCRDRRPTVHQILDEVGIIETEFLS
NRGIKGEQTYSGLECWREFNFSKQNVFGISISNLHDTEYKAVNKYNYTSYNNKNSLLMKR
YLDNSNFVVELINPNGIFKFKSFFEKEKLLYLKLKSTYKGEYYFDMGKFLTTIIQIHQIT
EIYYKMLQKYRELGLLRNNNNNINNNNNNNNNCNNSKKFKTTSESTSALGSDASSSSSPS
SSSPSPKYSASIYHHQ*fknlf*skinlifvnhlincpns*sf*kink*ii*in*kfiqi
*nk*tknqinknvllik


Translated Amino Acid sequence (All Frames)
Frame A:
spraarfinsagttafptgnravsatqfm*vislirhprlyticfrlvccvef*adhnft
qetaitmitptlirltigkaatpagtgpefpgkvihiggqkc*vvilqqyhqh*qh*hqq
qfnkiikiikiikiiiiiiiiikiiiiiiiiiiiiiiiiiiiiiikiiyqyhlhhhqlqm
iqlilyi*hq*wqedgfqfyshnwn*ikmii*islfnhlnhqn*nhnhchlifvviqyhq
imvvmyqplllqlqlqllyqllltyqcmklvqflpllllllllllhhhqkviiiiimvik
nqmnhklief*nl*invvklvnfi*lvvy*yqfynykifyyqlvlmklqqiihiikitii
mvvvmgmveeevtyqcmklvqflpllllllllllhhhqkviiiiimviknqmnhklief*
nl*invvklvnfi*lvvy*yqfynykifyyqlvlmklqqiihiikitiimvvvmgmveee
vqmlmvpiivvikilhkiqfiiqfivf*nhliqinnnvign*likfkhmrv*mvlnfqvi
iqmlvvvdinklinlyqnli*edqqwnlqfvyliiiiiinrimhslkqiimylyqiyhqa
ivpli*rmnvnfvmfsllihqllvmkn*iel*rnvfhfyf*fikinqikf*nnnfn**fl
****kkkkalhply---

---hwyivvqmskigrfvvemkkl*tiimkrvkfth*e*fygs*fvlq*qextfhqr*hy
fkmklifqfgftritdfhfqlehhnh**n*lqvcvyhvetedqrytkylmklellkqnff
qievlkvnklivvlnvgenltfqskmylefqfqiytiqnikqliniiiqvtiikthy**n
diwiiptlw*n*siqmvylssslfskkrnfyi*n*nqhikvniiliwvns*qqsfkyik*
lkyiikcyknieslvc*eiiiiiliiiiiitiiaiivknlkqhqnqhlh*dqmhhhhrhh
rhhhhhqnirhqsiitndlkiffkvk*i*fl*iilstvqivdhskk*inksyk*iknlyk
ykinklkik*ikmfy**k

Frame B:
pralpdsliqlapqlsplaigq*aqrnscelshslgtpgytlyasgsyvvwnseritish
rkqlsp*lrql*ydsl*gkllrlqvpvrnsrerlfilvvknvkw*ssnsiintsstnisn
nstk*sk*sk*sk********sk*********************sk*ytsttstttnfk*
ss*yctfntndgkrmvfsfiltigir*k**fkflysttsitkiktttiai*ys**yniik
*w**ctnhcyyncnfnsytnyy*htna*n*snfflfffffysfyfiiikk***l*lwl*k
tk*itn**nfeifr*ml*nw*ilfn*wfisinftitrffiinwy**sfnklsi*sksp*s
www*wewwrrr*htna*n*snfflfffffysfyfiiikk***l*lwl*ktk*itn**nfe
ifr*ml*nw*ilfn*wfisinftitrffiinwy**sfnklsi*sksp*swww*wewwrrr
ykc*wfq**w*skfftkfnllsnl*yfkii*sk*ttm**gin**nsni*eyewy*ifk**
fkcwwwwistsssictri*fkkinngifnsyi*ls*s*ste*cihsnkslcictkfitkq
*yl*fke*msil*cfrc*stnfw**kie*sckemfftftfns*r*ik*NFKTTILINNFY
NNNKKKKRRFTPYT---

---igtlwyrcprlgdl*wr*knfkpl**ke*nlltrnnfmgvdlycndrnxrftkdsii
sk*s*ffnldsqglqifisnwnttiiskinykyvftm*rqktngtpnt**swny*nrisf
k*ry*r*tnl*ws*mleri*lfkakciwnfnfkftryri*ss**i*lyklq**kliinet
ifg*fqlcgrinqskwyi*vqvffrkretfifkikini*r*ilf*yg*ilnnnhsntsnn
*nil*nvtki*rawfvkk****y*******q*lq***ki*nnirinicirirciiiivti
viititkifginlsspmi*ksflk*nkfnfckssyqlsk*liilknk*inhinklkiytn
ik*in*ksnk*kcfinkk

Frame C:
parcpih*fswhhsfphwqsgsernaihvsylth*apqaihymlparmlcgilsgsqfht
gnsyhhdyansntthyrescyacryrsgipgkgysywwskmlsgdpptvsstlaaltsat
iqqnnqnnqnnqnnnnnnnnnqnnnnnnnnnnnnnnnnnnnnnnqnnipvpppppptsnd
panivhltpmmargwfsvlfsqleldkndnlnffiqppqspklkpqplpfnirsntissn
ngsnvpttvtttatstpipiiidipmheispisssssssstpstssssksnnnynygykk
pnesqinrilksldkccetgefylisgllvsilqlqdfllsigideastnypynqnhhnh
gggngngggggdipmheispisssssssstpstssssksnnnynygykkpnesqinrilk
sldkccetgefylisgllvsilqlqdfllsigideastnypynqnhhnhgggngnggggg
tnvngsnnsgnqnssqnsiyypiysilksfnpnkqqcnrelidkiqtyesmngiefssnn
snvggggyqqahqfvpefnlrrstmessirifnyhnhnqqnnaftqtnhyvsvpnlspsn
stfnlknecqfcnvfavnpptfgdeklnrvvkkcfsllllihkdksnkilkqqf*liifi
iiikkkkgasppi---

---LVHCGTDVQDWAICSGDEKTLNHYNEKSEIYSLGIILWELICIAMTGTYVSPKIALF
QNEVDFSIWIHKDYRFSFPIGTPQSLVKLITSMCLPCRDRRPTVHQILDEVGIIETEFLS
NRGIKGEQTYSGLECWREFNFSKQNVFGISISNLHDTEYKAVNKYNYTSYNNKNSLLMKR
YLDNSNFVVELINPNGIFKFKSFFEKEKLLYLKLKSTYKGEYYFDMGKFLTTIIQIHQIT
EIYYKMLQKYRELGLLRNNNNNINNNNNNNNNCNNSKKFKTTSESTSALGSDASSSSSPS
SSSPSPKYSASIYHHQ*fknlf*skinlifvnhlincpns*sf*kink*ii*in*kfiqi
*nk*tknqinknvllik

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15624-1 (Contig-U15624-1Q)
/CSM_Contig/Contig-U15624-1Q.Seq.d
(3159 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15624-1 (Contig-U15624-1Q) /CSM_Contig/Conti... 1628 0.0
Contig-U11770-1 (Contig-U11770-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U15136-1 (Contig-U15136-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U14601-1 (Contig-U14601-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U13376-1 (Contig-U13376-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U12159-1 (Contig-U12159-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U11432-1 (Contig-U11432-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U10965-1 (Contig-U10965-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U10219-1 (Contig-U10219-1Q) /CSM_Contig/Conti... 42 0.005
Contig-U16382-1 (Contig-U16382-1Q) /CSM_Contig/Conti... 40 0.021

>Contig-U15624-1 (Contig-U15624-1Q) /CSM_Contig/Contig-U15624-1Q.Seq.d
Length = 3159

Score = 1628 bits (821), Expect = 0.0
Identities = 821/821 (100%)
Strand = Plus / Plus


Query: 1170 actccttctacttcatcatcatcaaaaagtaataataattataattatggttataaaaaa 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 actccttctacttcatcatcatcaaaaagtaataataattataattatggttataaaaaa 1229


Query: 1230 ccaaatgaatcacaaattaatagaattttgaaatctttagataaatgttgtgaaactggt 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 ccaaatgaatcacaaattaatagaattttgaaatctttagataaatgttgtgaaactggt 1289


Query: 1290 gaattttatttaattagtggtttattagtatcaattttacaattacaagattttttatta 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 gaattttatttaattagtggtttattagtatcaattttacaattacaagattttttatta 1349


Query: 1350 tcaattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcat 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 tcaattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcat 1409


Query: 1410 ggtggtggtaatgggaatggtggaggaggaggtacaaatgttaatggttccaataatagt 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 ggtggtggtaatgggaatggtggaggaggaggtacaaatgttaatggttccaataatagt 1469


Query: 1470 ggtaatcaaaattcttcacaaaattcaatttattatccaatttatagtattttaaaatca 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 ggtaatcaaaattcttcacaaaattcaatttattatccaatttatagtattttaaaatca 1529


Query: 1530 tttaatccaaataaacaacaatgtaatagggaattaattgataaaattcaaacatatgag 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1530 tttaatccaaataaacaacaatgtaatagggaattaattgataaaattcaaacatatgag 1589


Query: 1590 agtatgaatggtattgaattttcaagtaataattcaaatgttggtggtggtggatatcaa 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1590 agtatgaatggtattgaattttcaagtaataattcaaatgttggtggtggtggatatcaa 1649


Query: 1650 caagctcatcaatttgtaccagaatttaatttaagaagatcaacaatggaatcttcaatt 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1650 caagctcatcaatttgtaccagaatttaatttaagaagatcaacaatggaatcttcaatt 1709


Query: 1710 cgtatatttaattatcataatcataatcaacagaataatgcattcactcaaacaaatcat 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1710 cgtatatttaattatcataatcataatcaacagaataatgcattcactcaaacaaatcat 1769


Query: 1770 tatgtatctgtaccaaatttatcaccaagcaatagtacctttaatttaaagaatgaatgt 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1770 tatgtatctgtaccaaatttatcaccaagcaatagtacctttaatttaaagaatgaatgt 1829


Query: 1830 caattttgtaatgttttcgctgttaatccaccaacttttggtgatgaaaaattgaataga 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1830 caattttgtaatgttttcgctgttaatccaccaacttttggtgatgaaaaattgaataga 1889


Query: 1890 gttgtaaagaaatgtttttcacttttacttttaattcataaagataaatcaaataaaatt 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1890 gttgtaaagaaatgtttttcacttttacttttaattcataaagataaatcaaataaaatt 1949


Query: 1950 ttaaaacaacaattttaattaataatttttataataataat 1990
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1950 ttaaaacaacaattttaattaataatttttataataataat 1990


Score = 1509 bits (761), Expect = 0.0
Identities = 794/794 (100%)
Strand = Plus / Plus


Query: 2004 ggcgcttcaccccctatacannnnnnnnnncattggtacattgtggtacagatgtccaag 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 ggcgcttcaccccctatacannnnnnnnnncattggtacattgtggtacagatgtccaag 2063


Query: 2064 attgggcgatttgtagtggagatgaaaaaactttaaaccattataatgaaaagagtgaaa 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 attgggcgatttgtagtggagatgaaaaaactttaaaccattataatgaaaagagtgaaa 2123


Query: 2124 tttactcactaggaataattttatgggagttgatttgtattgcaatgacaggaacntacg 2183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 tttactcactaggaataattttatgggagttgatttgtattgcaatgacaggaacntacg 2183


Query: 2184 tttcaccaaagatagcattatttcaaaatgaagttgatttttcaatttggattcacaagg 2243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 tttcaccaaagatagcattatttcaaaatgaagttgatttttcaatttggattcacaagg 2243


Query: 2244 attacagattttcatttccaattggaacaccacaatcattagtaaaattaattacaagta 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 attacagattttcatttccaattggaacaccacaatcattagtaaaattaattacaagta 2303


Query: 2304 tgtgtttaccatgtagagacagaagaccaacggtacaccaaatacttgatgaagttggaa 2363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 tgtgtttaccatgtagagacagaagaccaacggtacaccaaatacttgatgaagttggaa 2363


Query: 2364 ttattgaaacagaatttctttcaaatagaggtattaaaggtgaacaaacttatagtggtc 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 ttattgaaacagaatttctttcaaatagaggtattaaaggtgaacaaacttatagtggtc 2423


Query: 2424 ttgaatgttggagagaatttaacttttcaaagcaaaatgtatttggaatttcaatttcaa 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 ttgaatgttggagagaatttaacttttcaaagcaaaatgtatttggaatttcaatttcaa 2483


Query: 2484 atttacacgatacagaatataaagcagttaataaatataattatacaagttacaataata 2543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2484 atttacacgatacagaatataaagcagttaataaatataattatacaagttacaataata 2543


Query: 2544 aaaactcattattaatgaaacgatatttggataattccaactttgtggtagaattaatca 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544 aaaactcattattaatgaaacgatatttggataattccaactttgtggtagaattaatca 2603


Query: 2604 atccaaatggtatatttaagttcaagtcttttttcgaaaaagagaaacttttatatttaa 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 atccaaatggtatatttaagttcaagtcttttttcgaaaaagagaaacttttatatttaa 2663


Query: 2664 aattaaaatcaacatataaaggtgaatattattttgatatgggtaaattcttaacaacaa 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 aattaaaatcaacatataaaggtgaatattattttgatatgggtaaattcttaacaacaa 2723


Query: 2724 tcattcaaatacatcaaataactgaaatatattataaaatgttacaaaaatatagagagc 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2724 tcattcaaatacatcaaataactgaaatatattataaaatgttacaaaaatatagagagc 2783


Query: 2784 ttggtttgttaaga 2797
||||||||||||||
Sbjct: 2784 ttggtttgttaaga 2797


Score = 730 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Plus


Query: 1 tccccgcgcgctgcccgattcattaattcagctggcaccacagctttccccactggcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccccgcgcgctgcccgattcattaattcagctggcaccacagctttccccactggcaat 60


Query: 61 cgggcagtgagcgcaacgcaattcatgtgagttatctcactcattaggcaccccaggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgggcagtgagcgcaacgcaattcatgtgagttatctcactcattaggcaccccaggcta 120


Query: 121 tacactatatgcttccggctcgtatgttgtgtggaattctgagcggatcacaatttcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacactatatgcttccggctcgtatgttgtgtggaattctgagcggatcacaatttcaca 180


Query: 181 caggaaacagctatcaccatgattacgccaactctaatacgactcactatagggaaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggaaacagctatcaccatgattacgccaactctaatacgactcactatagggaaagct 240


Query: 241 gctacgcctgcaggtaccggtccggaattcccgggaaaggttattcatattggtggtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctacgcctgcaggtaccggtccggaattcccgggaaaggttattcatattggtggtcaa 300


Query: 301 aaatgttaagtggtgatcctccaacagtatcatcaacactagcagcactaacatcagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatgttaagtggtgatcctccaacagtatcatcaacactagcagcactaacatcagcaa 360


Query: 361 caattcaa 368
||||||||
Sbjct: 361 caattcaa 368


Score = 620 bits (313), Expect = e-177
Identities = 313/313 (100%)
Strand = Plus / Plus


Query: 505 taccagtaccacctccaccaccaccaacttcaaatgatccagctaatattgtacatttaa 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taccagtaccacctccaccaccaccaacttcaaatgatccagctaatattgtacatttaa 564


Query: 565 caccaatgatggcaagaggatggttttcagttttattctcacaattggaattagataaaa 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caccaatgatggcaagaggatggttttcagttttattctcacaattggaattagataaaa 624


Query: 625 atgataatttaaatttctttattcaaccacctcaatcaccaaaattaaaaccacaaccat 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgataatttaaatttctttattcaaccacctcaatcaccaaaattaaaaccacaaccat 684


Query: 685 tgccatttaatattcgtagtaatacaatatcatcaaataatggtagtaatgtaccaacca 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgccatttaatattcgtagtaatacaatatcatcaaataatggtagtaatgtaccaacca 744


Query: 745 ctgttactacaactgcaacttcaactcctataccaattattattgacataccaatgcatg 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgttactacaactgcaacttcaactcctataccaattattattgacataccaatgcatg 804


Query: 805 aaattagtccaat 817
|||||||||||||
Sbjct: 805 aaattagtccaat 817


Score = 541 bits (273), Expect = e-153
Identities = 273/273 (100%)
Strand = Plus / Plus


Query: 1170 actccttctacttcatcatcatcaaaaagtaataataattataattatggttataaaaaa 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 actccttctacttcatcatcatcaaaaagtaataataattataattatggttataaaaaa 902


Query: 1230 ccaaatgaatcacaaattaatagaattttgaaatctttagataaatgttgtgaaactggt 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ccaaatgaatcacaaattaatagaattttgaaatctttagataaatgttgtgaaactggt 962


Query: 1290 gaattttatttaattagtggtttattagtatcaattttacaattacaagattttttatta 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 gaattttatttaattagtggtttattagtatcaattttacaattacaagattttttatta 1022


Query: 1350 tcaattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcat 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 tcaattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcat 1082


Query: 1410 ggtggtggtaatgggaatggtggaggaggaggt 1442
|||||||||||||||||||||||||||||||||
Sbjct: 1083 ggtggtggtaatgggaatggtggaggaggaggt 1115


Score = 240 bits (121), Expect = 1e-62
Identities = 121/121 (100%)
Strand = Plus / Plus


Query: 1024 caattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcatg 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 caattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcatg 1083


Query: 1084 gtggtggtaatgggaatggtggaggaggaggtgacataccaatgcatgaaattagtccaa 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gtggtggtaatgggaatggtggaggaggaggtgacataccaatgcatgaaattagtccaa 1143


Query: 1144 t 1144
|
Sbjct: 1144 t 1144


Score = 212 bits (107), Expect = 2e-54
Identities = 107/107 (100%)
Strand = Plus / Plus


Query: 857 atcatcatcaaaaagtaataataattataattatggttataaaaaaccaaatgaatcaca 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 atcatcatcaaaaagtaataataattataattatggttataaaaaaccaaatgaatcaca 1243


Query: 917 aattaatagaattttgaaatctttagataaatgttgtgaaactggtg 963
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 aattaatagaattttgaaatctttagataaatgttgtgaaactggtg 1290


Score = 212 bits (107), Expect = 2e-54
Identities = 107/107 (100%)
Strand = Plus / Plus


Query: 857 atcatcatcaaaaagtaataataattataattatggttataaaaaaccaaatgaatcaca 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 atcatcatcaaaaagtaataataattataattatggttataaaaaaccaaatgaatcaca 916


Query: 917 aattaatagaattttgaaatctttagataaatgttgtgaaactggtg 963
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 aattaatagaattttgaaatctttagataaatgttgtgaaactggtg 963


Score = 182 bits (92), Expect = 2e-45
Identities = 92/92 (100%)
Strand = Plus / Plus


Query: 1024 caattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcatg 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 caattggtattgatgaagcttcaacaaattatccatataatcaaaatcaccataatcatg 1410


Query: 1084 gtggtggtaatgggaatggtggaggaggaggt 1115
||||||||||||||||||||||||||||||||
Sbjct: 1411 gtggtggtaatgggaatggtggaggaggaggt 1442


Score = 99.6 bits (50), Expect = 3e-20
Identities = 50/50 (100%)
Strand = Plus / Plus


Query: 2853 gtaaaaaatttaaaacaacatcagaatcaacatctgcattaggatcagat 2902
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2853 gtaaaaaatttaaaacaacatcagaatcaacatctgcattaggatcagat 2902


Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus


Query: 2942 ccaaaatattcggcatcaatctatcatcaccaatg 2976
|||||||||||||||||||||||||||||||||||
Sbjct: 2942 ccaaaatattcggcatcaatctatcatcaccaatg 2976


Score = 65.9 bits (33), Expect = 4e-10
Identities = 33/33 (100%)
Strand = Plus / Plus


Query: 3023 catcttatcaactgtccaaatagttgatcattc 3055
|||||||||||||||||||||||||||||||||
Sbjct: 3023 catcttatcaactgtccaaatagttgatcattc 3055


Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 788 tgacataccaatgcatgaaattagtccaat 817
||||||||||||||||||||||||||||||
Sbjct: 1115 tgacataccaatgcatgaaattagtccaat 1144


Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 1115 tgacataccaatgcatgaaattagtccaat 1144
||||||||||||||||||||||||||||||
Sbjct: 788 tgacataccaatgcatgaaattagtccaat 817


>Contig-U11770-1 (Contig-U11770-1Q) /CSM_Contig/Contig-U11770-1Q.Seq.d
Length = 1595

Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus


Query: 1956 caacaattttaattaataatttttataataataat 1990
|||||| ||||||||||||||| |||||||||||
Sbjct: 683 caacaaatttaattaataatttaaataataataat 717


>Contig-U15136-1 (Contig-U15136-1Q) /CSM_Contig/Contig-U15136-1Q.Seq.d
Length = 313

Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1193 aaaaagtaataataattataat 1214
||||||||||||||||||||||
Sbjct: 79 aaaaagtaataataattataat 100


Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 866 aaaaagtaataataattataat 887
||||||||||||||||||||||
Sbjct: 79 aaaaagtaataataattataat 100


Score = 32.2 bits (16), Expect = 5.0
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 872 taataataattataat 887
||||||||||||||||
Sbjct: 97 taataataattataat 112


Score = 32.2 bits (16), Expect = 5.0
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1199 taataataattataat 1214
||||||||||||||||
Sbjct: 97 taataataattataat 112


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 100,213
Number of Sequences: 8402
Number of extensions: 100213
Number of successful extensions: 12851
Number of sequences better than 10.0: 641
length of query: 3159
length of database: 8,075,542
effective HSP length: 17
effective length of query: 3142
effective length of database: 7,932,708
effective search space: 24924568536
effective search space used: 24924568536
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 3
Homology vs DNA
Query= Contig-U15624-1 (Contig-U15624-1Q) /CSM_Contig/Contig-U15624-1Q.Seq.d
(3159 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ353157) Dictyostelium discoideum cDNA clone:dda49m05, 3' ... 1483 0.0 1
(BJ348431) Dictyostelium discoideum cDNA clone:dda33p03, 3' ... 1291 0.0 1
(BJ343891) Dictyostelium discoideum cDNA clone:dda17d14, 3' ... 1086 0.0 1
(C84042) Dictyostelium discoideum slug cDNA, clone SSC528. 969 0.0 2
(BJ408807) Dictyostelium discoideum cDNA clone:dds47d02, 3' ... 918 0.0 2
(BJ383076) Dictyostelium discoideum cDNA clone:ddc46e22, 3' ... 900 0.0 2
(BJ352091) Dictyostelium discoideum cDNA clone:dda45h18, 3' ... 829 0.0 2
(BJ347990) Dictyostelium discoideum cDNA clone:dda31h22, 3' ... 805 0.0 2
(BJ403384) Dictyostelium discoideum cDNA clone:dds24p19, 3' ... 799 0.0 2
(BJ347947) Dictyostelium discoideum cDNA clone:dda31o14, 3' ... 759 0.0 3
(BJ406060) Dictyostelium discoideum cDNA clone:dds34d01, 3' ... 745 0.0 2
(BJ344529) Dictyostelium discoideum cDNA clone:dda19k16, 3' ... 704 0.0 2
(BJ355808) Dictyostelium discoideum cDNA clone:dda58d08, 3' ... 654 0.0 2
(BJ407297) Dictyostelium discoideum cDNA clone:dds38i03, 3' ... 515 e-152 2
(BJ356927) Dictyostelium discoideum cDNA clone:dda61m21, 3' ... 436 e-147 3
(AU073863) Dictyostelium discoideum slug cDNA, clone SSI572. 476 e-129 1
(BJ404146) Dictyostelium discoideum cDNA clone:dds27d15, 3' ... 297 e-127 3
(C90467) Dictyostelium discoideum slug cDNA, clone SSI572. 371 e-109 2
(EV091499) 0187972 Brassica napus Apical meristem Brassica n... 307 e-108 2
(EV093579) 0191580 Brassica napus Apical meristem Brassica n... 307 e-108 2
(EV108674) 0113986 Brassica napus Senescent leaves Brassica ... 307 e-108 2
(EV184652) 0159491 Brassica napus Etiolated seedlings (pSPOR... 307 e-108 2
(EV149194) 0138506 Brassica napus Early anther Brassica napu... 307 e-108 2
(EV131158) 0163511 Brassica napus Flower Brassica napus cDNA... 307 e-108 2
(EV110136) 0115448 Brassica napus Senescent leaves Brassica ... 307 e-108 2
(EV106321) 0111633 Brassica napus Senescent leaves Brassica ... 307 e-108 2
(EV147732) 0213666 Brassica napus Very early anther Brassica... 307 e-108 2
(EV148912) 0138012 Brassica napus Early anther Brassica napu... 307 e-108 2
(BI804634) H142B10 Endosperm library from Oryza sativa (10 d... 307 e-108 2
(EV186340) 0200547 Brassica napus Undamaged cotyledons Brass... 305 e-107 2
(EV137365) 0174223 Brassica napus Flower Brassica napus cDNA... 305 e-107 2
(EV103185) 0183373 Brassica napus Leaf library Brassica napu... 301 e-106 2
(EV182667) 0156113 Brassica napus Etiolated seedlings (pSPOR... 301 e-106 2
(EV183012) 0156658 Brassica napus Etiolated seedlings (pSPOR... 301 e-106 2
(EV180810) 0152650 Brassica napus Etiolated seedlings (pSPOR... 301 e-106 2
(EV131183) 0163536 Brassica napus Flower Brassica napus cDNA... 301 e-106 2
(EV143212) 0209144 Brassica napus Very early anther Brassica... 301 e-106 2
(EV126718) 0194227 Brassica napus Stem library Brassica napu... 299 e-106 2
(EV109102) 0114414 Brassica napus Senescent leaves Brassica ... 301 e-106 2
(EV146667) 0212601 Brassica napus Very early anther Brassica... 301 e-106 2
(EV144187) 0210121 Brassica napus Very early anther Brassica... 301 e-106 2
(EV143701) 0209634 Brassica napus Very early anther Brassica... 301 e-106 2
(EV143154) 0209086 Brassica napus Very early anther Brassica... 301 e-106 2
(EV147867) 0213801 Brassica napus Very early anther Brassica... 301 e-106 2
(EV195973) 0097125 Brassica napus Cold acclimation - light B... 299 e-106 2
(EV143200) 0209132 Brassica napus Very early anther Brassica... 301 e-106 2
(EV145166) 0211100 Brassica napus Very early anther Brassica... 301 e-106 2
(EV143078) 0209010 Brassica napus Very early anther Brassica... 301 e-106 2
(EV145678) 0211612 Brassica napus Very early anther Brassica... 301 e-106 2
(EV143145) 0209077 Brassica napus Very early anther Brassica... 301 e-106 2
(EV138361) 0204287 Brassica napus Very early anther Brassica... 301 e-106 2
(EV144703) 0210637 Brassica napus Very early anther Brassica... 301 e-106 2
(BD263354) Compositions and methods for use in recombination... 299 e-105 2
(DD238982) METHODS FOR PREPARING PURIFIED PROSTAGLANDIN E SY... 299 e-105 2
(U12391) Cloning vector pSport2, complete sequence. 299 e-105 2
(U12390) Cloning vector pSport1, complete cds. 299 e-105 2
(AJ271468) Arabidopsis thaliana mRNA for mitochondrial F1 AT... 299 e-105 2
(AX670963) Sequence 1 from Patent EP1277832. 299 e-105 2
(AR692822) Sequence 1 from patent US 6913899. 299 e-105 2
(AX670965) Sequence 3 from Patent EP1277832. 299 e-105 2
(AR692823) Sequence 3 from patent US 6913899. 299 e-105 2
(EG359278) RothBlotAtm_0248.sp6_034.ab1 SCID Mouse Thymus Re... 299 e-105 2
(EV098440) 0177589 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EE663544) Roth1L_0416.sp6_002.ab1 SCID Mouse Thymus Regulat... 299 e-105 2
(CC268418) CH261-19P24_Sp6.1 CH261 Gallus gallus genomic clo... 299 e-105 2
(EV176897) 0145152 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV099380) 0179181 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV098507) 0177713 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV177892) 0147165 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV091802) 0188523 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV177591) 0146592 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV091342) 0187696 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV178741) 0148757 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV091359) 0187740 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV091673) 0188316 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV091654) 0188271 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV177893) 0147166 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV179080) 0149395 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV176841) 0145024 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV177778) 0146942 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV177781) 0146945 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV177938) 0147287 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV178383) 0148064 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV177594) 0146595 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV177729) 0146856 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV176732) 0144843 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV098432) 0177574 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV091527) 0188025 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV091377) 0187762 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV178709) 0148686 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV098856) 0178325 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV177946) 0147295 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV091301) 0187632 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV090739) 0186665 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV091467) 0187914 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV099706) 0179752 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV178530) 0148361 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV178057) 0147515 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV093436) 0191356 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093425) 0191320 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV178904) 0149066 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV093683) 0191684 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV177774) 0146938 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV093844) 0191845 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV098296) 0177321 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV092697) 0190105 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093582) 0191583 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093470) 0191416 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093011) 0190619 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093849) 0191850 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093584) 0191585 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093590) 0191591 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV177616) 0146654 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV101910) 0094233 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV093634) 0191635 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092526) 0189824 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093862) 0191863 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093827) 0191828 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093648) 0191649 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093153) 0190848 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV177881) 0147154 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV093812) 0191813 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093143) 0190838 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093297) 0191116 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV177627) 0146665 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV093296) 0191115 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093010) 0190618 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093569) 0191570 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092686) 0190094 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV101930) 0094253 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV092662) 0190048 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093614) 0191615 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093467) 0191413 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093137) 0190832 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093576) 0191577 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092547) 0189867 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV178712) 0148689 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV093799) 0191800 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093004) 0190612 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV178561) 0148392 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV177172) 0145727 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV093819) 0191820 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV101894) 0094217 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV177588) 0146589 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(CV905068) PDpcd_0605 mycelium, nitrogen starvation Phytopht... 299 e-105 2
(EV193131) 0090614 Brassica napus Cold acclimation - dark Br... 299 e-105 2
(EV180484) 0151982 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV223327) 0105253 Brassica napus Damaged cotyledons Brassic... 299 e-105 2
(EV196656) 0097809 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV179017) 0149258 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV135144) 0170270 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV112580) 0117892 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV112551) 0117863 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV179045) 0149324 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EC370306) G840P315FI6.T0 Oscarella carmela pSport1 Library ... 299 e-105 2
(EV152413) 0142335 Brassica napus Early anther Brassica napu... 299 e-105 2
(EV139993) 0205919 Brassica napus Very early anther Brassica... 299 e-105 2
(EV180443) 0151900 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV163373) 0164325 Brassica napus Late bud Brassica napus cD... 299 e-105 2
(EV179062) 0149377 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184797) 0159727 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184433) 0159159 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV108580) 0113892 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV137367) 0174226 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV112651) 0117963 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV112617) 0117929 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV108662) 0113974 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV184584) 0159377 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184111) 0158610 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV106954) 0112266 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV138693) 0204619 Brassica napus Very early anther Brassica... 299 e-105 2
(EV116346) 0121658 Brassica napus Root library Brassica napu... 299 e-105 2
(EV114272) 0119584 Brassica napus Root library Brassica napu... 299 e-105 2
(EV108608) 0113920 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV108594) 0113906 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV184462) 0159188 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV130062) 0162175 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV111894) 0117206 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV108531) 0113843 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV184455) 0159181 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184088) 0158587 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183724) 0158000 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV179034) 0149313 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV112622) 0117934 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV112588) 0117900 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV163505) 0164652 Brassica napus Late bud Brassica napus cD... 299 e-105 2
(EV227517) 0109443 Brassica napus Damaged cotyledons Brassic... 299 e-105 2
(EV184069) 0158537 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV165348) 0168221 Brassica napus Late bud Brassica napus cD... 299 e-105 2
(EV184443) 0159169 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183669) 0157900 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183493) 0157611 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV164776) 0167207 Brassica napus Late bud Brassica napus cD... 299 e-105 2
(EV150099) 0140021 Brassica napus Early anther Brassica napu... 299 e-105 2
(EV136189) 0171897 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV130038) 0162151 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV184776) 0159684 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184311) 0158947 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183925) 0158312 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183891) 0158278 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183727) 0158003 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV164988) 0167607 Brassica napus Late bud Brassica napus cD... 299 e-105 2
(EV163409) 0164417 Brassica napus Late bud Brassica napus cD... 299 e-105 2
(EV140664) 0206593 Brassica napus Very early anther Brassica... 299 e-105 2
(EV184781) 0159689 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184122) 0158644 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183651) 0157881 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184284) 0158920 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183506) 0157637 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV131727) 0164608 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV111961) 0117273 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV111911) 0117223 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV100780) 0093103 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV185149) 0160272 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183923) 0158310 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183728) 0158004 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183507) 0157639 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV162845) 0163242 Brassica napus Late bud Brassica napus cD... 299 e-105 2
(EV150835) 0140757 Brassica napus Early anther Brassica napu... 299 e-105 2
(EV092103) 0189098 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV184489) 0159238 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV108698) 0114010 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV100966) 0093289 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EC373853) G840P35FB10.T0 Oscarella carmela pSport1 Library ... 299 e-105 2
(EC372589) G840P33FL12.T0 Oscarella carmela pSport1 Library ... 299 e-105 2
(EV184290) 0158926 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184247) 0158860 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184113) 0158612 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184438) 0159164 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184248) 0158861 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183546) 0157717 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183536) 0157697 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183510) 0157645 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV092116) 0189111 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV184959) 0159960 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184468) 0159194 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184415) 0159118 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184259) 0158872 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184258) 0158871 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184072) 0158540 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183833) 0158195 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183682) 0157913 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183535) 0157695 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV141816) 0207747 Brassica napus Very early anther Brassica... 299 e-105 2
(EV184624) 0159440 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184033) 0158464 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183685) 0157916 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183683) 0157914 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV097324) 0196235 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV185084) 0160166 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184429) 0159132 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV092097) 0189067 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV203119) 0104272 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV198810) 0099963 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV184942) 0159921 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184767) 0159675 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184432) 0159146 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184126) 0158648 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184117) 0158616 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184053) 0158521 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183843) 0158205 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183656) 0157886 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV141021) 0206950 Brassica napus Very early anther Brassica... 299 e-105 2
(EV114289) 0119601 Brassica napus Root library Brassica napu... 299 e-105 2
(EV102879) 0095202 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EC368058) G840P312FG4.T0 Oscarella carmela pSport1 Library ... 299 e-105 2
(EV226464) 0108390 Brassica napus Damaged cotyledons Brassic... 299 e-105 2
(EV185109) 0160206 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184269) 0158882 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV130081) 0162194 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV103112) 0183229 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV101755) 0094078 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV183637) 0157867 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183539) 0157703 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV124663) 0129975 Brassica napus Root library Brassica napu... 299 e-105 2
(EV190207) 0087688 Brassica napus Cold acclimation - dark Br... 299 e-105 2
(EV183688) 0157919 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183527) 0157679 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV111959) 0117271 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV097130) 0195879 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094661) 0192662 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094118) 0192119 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092216) 0189295 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV091930) 0188751 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV190177) 0087658 Brassica napus Cold acclimation - dark Br... 299 e-105 2
(EV183653) 0157883 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV125015) 0130327 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113531) 0118843 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113349) 0118661 Brassica napus Root library Brassica napu... 299 e-105 2
(EV103382) 0183796 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV092399) 0189587 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092104) 0189099 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV091971) 0188861 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV184779) 0159687 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183487) 0157599 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV118898) 0124210 Brassica napus Root library Brassica napu... 299 e-105 2
(EV095668) 0193669 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094764) 0192765 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094664) 0192665 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV185147) 0160268 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184916) 0159895 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184460) 0159186 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184046) 0158514 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183665) 0157896 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183477) 0157579 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV124279) 0129591 Brassica napus Root library Brassica napu... 299 e-105 2
(EV114356) 0119668 Brassica napus Root library Brassica napu... 299 e-105 2
(EV101139) 0093462 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV097293) 0196170 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094284) 0192285 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV195553) 0096705 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV184295) 0158931 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV184023) 0158454 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183459) 0157543 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV096186) 0194259 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EC372604) G840P33FL4.T0 Oscarella carmela pSport1 Library I... 299 e-105 2
(EV185087) 0160171 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV122379) 0127691 Brassica napus Root library Brassica napu... 299 e-105 2
(EV118764) 0124076 Brassica napus Root library Brassica napu... 299 e-105 2
(EV115334) 0120646 Brassica napus Root library Brassica napu... 299 e-105 2
(EV103258) 0183521 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV103241) 0183486 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV102427) 0094750 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV096153) 0194202 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095516) 0193517 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV195336) 0092822 Brassica napus Cold acclimation - dark Br... 299 e-105 2
(EV183854) 0158229 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV124789) 0130101 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119792) 0125104 Brassica napus Root library Brassica napu... 299 e-105 2
(EV112570) 0117882 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV096519) 0194836 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV096022) 0194023 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV096002) 0194003 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095074) 0193075 Brassica napus Apical meristem Brassica n... 299 e-105 2
(CV904893) PDpcd_0317 mycelium, nitrogen starvation Phytopht... 299 e-105 2
(EV183452) 0157529 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV139625) 0205551 Brassica napus Very early anther Brassica... 299 e-105 2
(EV118615) 0123927 Brassica napus Root library Brassica napu... 299 e-105 2
(EV115007) 0120319 Brassica napus Root library Brassica napu... 299 e-105 2
(EV098045) 0197526 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094924) 0192925 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV184423) 0159126 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183551) 0157727 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV183467) 0157559 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV126533) 0131845 Brassica napus Root library Brassica napu... 299 e-105 2
(EV116343) 0121655 Brassica napus Root library Brassica napu... 299 e-105 2
(EV103211) 0183426 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV095290) 0193291 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095286) 0193287 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094949) 0192950 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094490) 0192491 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092228) 0189307 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV135117) 0170243 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV102476) 0094799 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV097864) 0197184 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV097122) 0195871 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095338) 0193339 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095178) 0193179 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095098) 0193099 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094497) 0192498 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094304) 0192305 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV184100) 0158599 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV180349) 0151717 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV125160) 0130472 Brassica napus Root library Brassica napu... 299 e-105 2
(EV118642) 0123954 Brassica napus Root library Brassica napu... 299 e-105 2
(EV118321) 0123633 Brassica napus Root library Brassica napu... 299 e-105 2
(EV101728) 0094051 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV095506) 0193507 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095145) 0193146 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094665) 0192666 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094630) 0192631 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV203450) 0104603 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV202471) 0103624 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV198096) 0099249 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV113713) 0119025 Brassica napus Root library Brassica napu... 299 e-105 2
(EV102717) 0095040 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV102418) 0094741 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV101173) 0093496 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV100978) 0093301 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV097912) 0197257 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095315) 0193316 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095140) 0193141 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095106) 0193107 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094812) 0192813 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094620) 0192621 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV150656) 0140578 Brassica napus Early anther Brassica napu... 299 e-105 2
(EV150606) 0140528 Brassica napus Early anther Brassica napu... 299 e-105 2
(EV126530) 0131842 Brassica napus Root library Brassica napu... 299 e-105 2
(EV120028) 0125340 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119246) 0124558 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119242) 0124554 Brassica napus Root library Brassica napu... 299 e-105 2
(EV114566) 0119878 Brassica napus Root library Brassica napu... 299 e-105 2
(EV114533) 0119845 Brassica napus Root library Brassica napu... 299 e-105 2
(EV111591) 0116903 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV094791) 0192792 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094470) 0192471 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092118) 0189113 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092107) 0189102 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV198450) 0099603 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV182643) 0156065 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV125146) 0130458 Brassica napus Root library Brassica napu... 299 e-105 2
(EV124831) 0130143 Brassica napus Root library Brassica napu... 299 e-105 2
(EV124287) 0129599 Brassica napus Root library Brassica napu... 299 e-105 2
(EV121639) 0126951 Brassica napus Root library Brassica napu... 299 e-105 2
(EV121599) 0126911 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119742) 0125054 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119672) 0124984 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113790) 0119102 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113237) 0118549 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113060) 0118372 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113032) 0118344 Brassica napus Root library Brassica napu... 299 e-105 2
(EV102477) 0094800 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV097626) 0196776 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV097314) 0196225 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV097162) 0195936 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095557) 0193558 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095511) 0193512 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095323) 0193324 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095131) 0193132 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094956) 0192957 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094806) 0192807 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093939) 0191940 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092227) 0189306 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV091984) 0188874 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EC373448) G840P34FP5.T0 Oscarella carmela pSport1 Library I... 299 e-105 2
(EV198090) 0099243 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV182797) 0156320 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV140902) 0206831 Brassica napus Very early anther Brassica... 299 e-105 2
(EV124330) 0129642 Brassica napus Root library Brassica napu... 299 e-105 2
(EV120264) 0125576 Brassica napus Root library Brassica napu... 299 e-105 2
(EV118116) 0123428 Brassica napus Root library Brassica napu... 299 e-105 2
(EV115806) 0121118 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113090) 0118402 Brassica napus Root library Brassica napu... 299 e-105 2
(EV110710) 0116022 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV103212) 0183427 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV096378) 0194597 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV096018) 0194019 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095848) 0193849 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV092254) 0189355 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EC374944) G840P36FP5.T0 Oscarella carmela pSport1 Library I... 299 e-105 2
(EV197643) 0098796 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV182833) 0156367 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV179825) 0150790 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV150636) 0140558 Brassica napus Early anther Brassica napu... 299 e-105 2
(EV124457) 0129769 Brassica napus Root library Brassica napu... 299 e-105 2
(EV122072) 0127384 Brassica napus Root library Brassica napu... 299 e-105 2
(EV118620) 0123932 Brassica napus Root library Brassica napu... 299 e-105 2
(EV117128) 0122440 Brassica napus Root library Brassica napu... 299 e-105 2
(EV114690) 0120002 Brassica napus Root library Brassica napu... 299 e-105 2
(EV113574) 0118886 Brassica napus Root library Brassica napu... 299 e-105 2
(EV103394) 0183820 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV097757) 0197005 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV096648) 0195081 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094825) 0192826 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094784) 0192785 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094510) 0192511 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094471) 0192472 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EC368836) G840P313FH8.T0 Oscarella carmela pSport1 Library ... 299 e-105 2
(EV198114) 0099267 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV190175) 0087656 Brassica napus Cold acclimation - dark Br... 299 e-105 2
(EV140913) 0206842 Brassica napus Very early anther Brassica... 299 e-105 2
(EV140520) 0206447 Brassica napus Very early anther Brassica... 299 e-105 2
(EV140510) 0206437 Brassica napus Very early anther Brassica... 299 e-105 2
(EV126567) 0131879 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119084) 0124396 Brassica napus Root library Brassica napu... 299 e-105 2
(EV114741) 0120053 Brassica napus Root library Brassica napu... 299 e-105 2
(EV111592) 0116904 Brassica napus Senescent leaves Brassica ... 299 e-105 2
(EV097466) 0196494 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV097133) 0195882 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095702) 0193703 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV094460) 0192461 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV093942) 0191943 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV202076) 0103229 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV181480) 0153808 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV180016) 0151164 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV135529) 0170655 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV121393) 0126705 Brassica napus Root library Brassica napu... 299 e-105 2
(EV121053) 0126365 Brassica napus Root library Brassica napu... 299 e-105 2
(EV120663) 0125975 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119729) 0125041 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119567) 0124879 Brassica napus Root library Brassica napu... 299 e-105 2
(EV119564) 0124876 Brassica napus Root library Brassica napu... 299 e-105 2
(EV118585) 0123897 Brassica napus Root library Brassica napu... 299 e-105 2
(EV117029) 0122341 Brassica napus Root library Brassica napu... 299 e-105 2
(EV116373) 0121685 Brassica napus Root library Brassica napu... 299 e-105 2
(EV100952) 0093275 Brassica napus Leaf library Brassica napu... 299 e-105 2
(EV097292) 0196169 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV097120) 0195869 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV095348) 0193349 Brassica napus Apical meristem Brassica n... 299 e-105 2
(EV197123) 0098276 Brassica napus Cold acclimation - light B... 299 e-105 2
(EV190485) 0087966 Brassica napus Cold acclimation - dark Br... 299 e-105 2
(EV183458) 0157541 Brassica napus Etiolated seedlings (pSPOR... 299 e-105 2
(EV134050) 0169176 Brassica napus Flower Brassica napus cDNA... 299 e-105 2
(EV121606) 0126918 Brassica napus Root library Brassica napu... 299 e-105 2
(EV121228) 0126540 Brassica napus Root library Brassica napu... 299 e-105 2
(EV117506) 0122818 Brassica napus Root library Brassica napu... 299 e-105 2
(EV116177) 0121489 Brassica napus Root library Brassica napu... 299 e-105 2
(EV116017) 0121329 Brassica napus Root library Brassica napu... 299 e-105 2
(EV116009) 0121321 Brassica napus Root library Brassica napu... 299 e-105 2
(EV114373) 0119685 Brassica napus Root library Brassica napu... 299 e-105 2

>(BJ353157) Dictyostelium discoideum cDNA clone:dda49m05, 3' end,
single read.
Length = 781

Score = 1483 bits (748), Expect = 0.0
Identities = 751/751 (100%)
Strand = Plus / Minus


Query: 2034 cattggtacattgtggtacagatgtccaagattgggcgatttgtagtggagatgaaaaaa 2093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cattggtacattgtggtacagatgtccaagattgggcgatttgtagtggagatgaaaaaa 722


Query: 2094 ctttaaaccattataatgaaaagagtgaaatttactcactaggaataattttatgggagt 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctttaaaccattataatgaaaagagtgaaatttactcactaggaataattttatgggagt 662


Query: 2154 tgatttgtattgcaatgacaggaacntacgtttcaccaaagatagcattatttcaaaatg 2213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgatttgtattgcaatgacaggaacntacgtttcaccaaagatagcattatttcaaaatg 602


Query: 2214 aagttgatttttcaatttggattcacaaggattacagattttcatttccaattggaacac 2273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagttgatttttcaatttggattcacaaggattacagattttcatttccaattggaacac 542


Query: 2274 cacaatcattagtaaaattaattacaagtatgtgtttaccatgtagagacagaagaccaa 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacaatcattagtaaaattaattacaagtatgtgtttaccatgtagagacagaagaccaa 482


Query: 2334 cggtacaccaaatacttgatgaagttggaattattgaaacagaatttctttcaaatagag 2393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggtacaccaaatacttgatgaagttggaattattgaaacagaatttctttcaaatagag 422


Query: 2394 gtattaaaggtgaacaaacttatagtggtcttgaatgttggagagaatttaacttttcaa 2453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtattaaaggtgaacaaacttatagtggtcttgaatgttggagagaatttaacttttcaa 362


Query: 2454 agcaaaatgtatttggaatttcaatttcaaatttacacgatacagaatataaagcagtta 2513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcaaaatgtatttggaatttcaatttcaaatttacacgatacagaatataaagcagtta 302


Query: 2514 ataaatataattatacaagttacaataataaaaactcattattaatgaaacgatatttgg 2573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataaatataattatacaagttacaataataaaaactcattattaatgaaacgatatttgg 242


Query: 2574 ataattccaactttgtggtagaattaatcaatccaaatggtatatttaagttcaagtctt 2633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataattccaactttgtggtagaattaatcaatccaaatggtatatttaagttcaagtctt 182


Query: 2634 ttttcgaaaaagagaaacttttatatttaaaattaaaatcaacatataaaggtgaatatt 2693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttcgaaaaagagaaacttttatatttaaaattaaaatcaacatataaaggtgaatatt 122


Query: 2694 attttgatatgggtaaattcttaacaacaatcattcaaatacatcaaataactgaaatat 2753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attttgatatgggtaaattcttaacaacaatcattcaaatacatcaaataactgaaatat 62


Query: 2754 attataaaatgttacaaaaatatagagagct 2784
|||||||||||||||||||||||||||||||
Sbjct: 61 attataaaatgttacaaaaatatagagagct 31

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 3,197,981,918
Number of extensions: 213638499
Number of successful extensions: 20451633
Number of sequences better than 10.0: 208727
Length of query: 3159
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 3134
Effective length of database: 96,311,147,814
Effective search space: 301839137249076
Effective search space used: 301839137249076
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15624-1 (Contig-U15624-1Q) /CSM_Contig/Contig-U15624-1Q.Seq.d
(3159 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54EM1) RecName: Full=Probable serine/threonine-protein kinase ... 384 e-108
(Q54EG9) RecName: Full=Probable serine/threonine-protein kinase ... 330 7e-92
AX647765_1(AX647765|pid:none) Sequence 1957 from Patent EP1270724. 89 1e-15
(Q59296) RecName: Full=Catalase; EC=1.11.1.6; &I40767(... 63 8e-08
GN111520_1(GN111520|pid:none) Sequence 16301 from Patent WO20090... 62 2e-07
DQ983234_1(DQ983234|pid:none) Zingiber officinale retrotransposo... 59 1e-06
A55092(A55092)catalase (EC 1.11.1.6) CAT-2 - maize (fragment) 57 4e-06
M15816_1(M15816|pid:none) Synthetic diphteria tox gene DNA, part... 57 4e-06
AJ535748_1(AJ535748|pid:none) Cicer arietinum Ty1-copia retrotra... 55 2e-05
AM397241_2(AM397241|pid:none) Platanus x acerifolia mRNA for par... 55 2e-05
M18327_1(M18327|pid:none) Cloning vector with pBGS9 kanamycin re... 53 6e-05
EU874251_4(EU874251|pid:none) Burkholderia cenocepacia strain K5... 52 1e-04
(Q54HC6) RecName: Full=Ankyrin repeat-containing protein kinase ... 52 1e-04
(Q54XX5) RecName: Full=Probable serine/threonine-protein kinase ... 52 1e-04
FB901847_1(FB901847|pid:none) Sequence 121120 from Patent WO2008... 50 7e-04
(Q54RR9) RecName: Full=Probable serine/threonine-protein kinase ... 49 0.001
AJ271468_1(AJ271468|pid:none) Arabidopsis thaliana mRNA for mito... 48 0.002
U12390_1(U12390|pid:none) Cloning vector pSport1, complete cds. 48 0.003
(Q55GG4) RecName: Full=Probable serine/threonine-protein kinase ... 47 0.003
FB901831_1(FB901831|pid:none) Sequence 121104 from Patent WO2008... 47 0.004
CS546200_1(CS546200|pid:none) Sequence 9 from Patent WO200701985... 47 0.004
BT061854_1(BT061854|pid:none) Zea mays full-length cDNA clone ZM... 47 0.006
AX301825_1(AX301825|pid:none) Sequence 4 from Patent WO0185768. ... 47 0.006
BT060801_1(BT060801|pid:none) Zea mays full-length cDNA clone ZM... 46 0.010
BT036848_1(BT036848|pid:none) Zea mays full-length cDNA clone ZM... 46 0.010
AB027411_1(AB027411|pid:none) Xenopus laevis mRNA for c-met/hepa... 45 0.013
M19035_3(M19035|pid:none) E.coli D-serine deaminase activator (d... 45 0.017
U77681_1(U77681|pid:none) Xenopus laevis tyrosine kinase recepto... 45 0.022
D87758_1(D87758|pid:none) Xenopus laevis mRNA for Xron, complete... 45 0.022
AK109696_1(AK109696|pid:none) Oryza sativa Japonica Group cDNA c... 44 0.028
AY091607_1(AY091607|pid:none) Escherichia coli plasmid pTUC100, ... 44 0.049
U01771_2(U01771|pid:none) Mycoplasma genitalium random genomic c... 44 0.049
(Q00PJ8) RecName: Full=Hepatocyte growth factor receptor; ... 43 0.063
AC098571_9(AC098571|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.063
(Q552C6) RecName: Full=Dual specificity protein kinase dpyk4; ... 42 0.11
U01064_1(U01064|pid:none) Dictyostelium discoideum AX2 protein t... 42 0.14
T18287(T18287) protein-tyrosine kinase (EC 2.7.1.112) - slime mo... 42 0.14
(Q54I36) RecName: Full=Dual specificity protein kinase dpyk3; ... 42 0.14
EF677305_1(EF677305|pid:none) Picea sitchensis clone WS02765_B19... 42 0.14
BT055250_1(BT055250|pid:none) Zea mays full-length cDNA clone ZM... 42 0.18
FB901861_1(FB901861|pid:none) Sequence 121134 from Patent WO2008... 42 0.18
EU953196_1(EU953196|pid:none) Zea mays clone 1390188 unknown mRNA. 42 0.18
FB918186_1(FB918186|pid:none) Sequence 137459 from Patent WO2008... 41 0.24
U15443_1(U15443|pid:none) Mus musculus proto-oncogene protein c-... 41 0.24
(Q78DX7) RecName: Full=Proto-oncogene tyrosine-protein kinase RO... 41 0.24
AF411927_1(AF411927|pid:none) Takifugu rubripes platelet-derived... 41 0.24
AY085263_1(AY085263|pid:none) Arabidopsis thaliana clone 142106 ... 41 0.31
(P08922) RecName: Full=Proto-oncogene tyrosine-protein kinase RO... 41 0.31
AP003855_9(AP003855|pid:none) Oryza sativa Japonica Group genomi... 41 0.31
EU236946_1(EU236946|pid:none) Homo sapiens SLC34A2/ROS fusion pr... 41 0.31
FB901855_1(FB901855|pid:none) Sequence 121128 from Patent WO2008... 41 0.31
AL132671_4(AL132671|pid:none) Human DNA sequence from clone RP1-... 41 0.31
M13880_1(M13880|pid:none) Human mcf3 (rearranged ros1) proto-onc... 41 0.31
AF263243_1(AF263243|pid:none) Myxococcus xanthus SocE (socE) gen... 41 0.32
AC133007_27(AC133007|pid:none) Oryza sativa chromosome 3 BAC OSJ... 40 0.41
AF170722_147(AF170722|pid:none) Rabbit fibroma virus, complete g... 40 0.41
AB026650_1(AB026650|pid:none) Arabidopsis thaliana genomic DNA, ... 40 0.41
EF014128_1(EF014128|pid:none) Synthetic construct flag-tagged pr... 40 0.41
(Q55GE6) RecName: Full=Probable serine/threonine-protein kinase ... 40 0.41
AY232269_1(AY232269|pid:none) Dictyostelium discoideum putative ... 40 0.41
GN037473_1(GN037473|pid:none) Sequence 49 from Patent WO20090104... 40 0.54
A81671_1(A81671|pid:none) Sequence 9 from Patent WO9901558. 40 0.54
D45243_1(D45243|pid:none) Mouse mRNA for ctk, complete cds. 40 0.54
FN357913_9(FN357913|pid:none) Schistosoma mansoni genome sequenc... 40 0.70
AB016885_14(AB016885|pid:none) Arabidopsis thaliana genomic DNA,... 40 0.70
AM465666_5(AM465666|pid:none) Vitis vinifera contig VV78X057834.... 40 0.70
AF462860_1(AF462860|pid:none) Arabidopsis thaliana AT5g58950/k19... 40 0.70
EU974935_1(EU974935|pid:none) Zea mays clone 461326 unknown mRNA. 40 0.70
(Q8MVR1) RecName: Full=Cyclic GMP-binding protein C; EC... 40 0.70
EF014123_1(EF014123|pid:none) Synthetic construct flag-tagged pr... 40 0.70
(Q54RB7) RecName: Full=Dual specificity protein kinase shkA; ... 40 0.70
DQ673014_1(DQ673014|pid:none) Odorrana grahami clone AH208 odorr... 40 0.70
AC009325_4(AC009325|pid:none) Arabidopsis thaliana chromosome II... 39 0.92
AL078637_31(AL078637|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.92
AP002845_6(AP002845|pid:none) Oryza sativa Japonica Group genomi... 39 0.92
EF014127_1(EF014127|pid:none) Synthetic construct flag-tagged pr... 39 0.92
M34353_1(M34353|pid:none) Human transmembrane tyrosine-specific ... 39 1.2
EF086098_1(EF086098|pid:none) Picea sitchensis clone WS0277_H12 ... 39 1.2
FB918126_1(FB918126|pid:none) Sequence 137399 from Patent WO2008... 39 1.2
(Q23915) RecName: Full=Probable serine/threonine-protein kinase ... 39 1.2
FB830032_1(FB830032|pid:none) Sequence 49305 from Patent WO20080... 39 1.2
AP004654_19(AP004654|pid:none) Oryza sativa Japonica Group genom... 39 1.2
BT060933_1(BT060933|pid:none) Zea mays full-length cDNA clone ZM... 39 1.2
FB796674_1(FB796674|pid:none) Sequence 15947 from Patent WO20080... 39 1.6
FB901823_1(FB901823|pid:none) Sequence 121096 from Patent WO2008... 39 1.6
BT071723_1(BT071723|pid:none) Picea sitchensis clone WS0443_C13 ... 39 1.6
FB901821_1(FB901821|pid:none) Sequence 121094 from Patent WO2008... 39 1.6
FB901827_1(FB901827|pid:none) Sequence 121100 from Patent WO2008... 39 1.6
FB918028_1(FB918028|pid:none) Sequence 137301 from Patent WO2008... 39 1.6
AY140072_1(AY140072|pid:none) Arabidopsis thaliana protein kinas... 39 1.6
BT043188_1(BT043188|pid:none) Zea mays full-length cDNA clone ZM... 39 1.6
AC120505_2(AC120505|pid:none) Oryza sativa chromosome 3 BAC OSJN... 39 1.6
AP008209_2090(AP008209|pid:none) Oryza sativa (japonica cultivar... 39 1.6
BT061570_1(BT061570|pid:none) Zea mays full-length cDNA clone ZM... 38 2.0
(Q86PM4) RecName: Full=Fibroblast growth factor receptor; ... 38 2.0
FB811737_1(FB811737|pid:none) Sequence 31010 from Patent WO20080... 38 2.0
EU957103_1(EU957103|pid:none) Zea mays clone 1582826 protein kin... 38 2.0
BT071275_1(BT071275|pid:none) Picea sitchensis clone WS02817_H11... 38 2.0
BT053862_1(BT053862|pid:none) Zea mays full-length cDNA clone ZM... 38 2.0
(Q54H45) RecName: Full=Probable serine/threonine-protein kinase ... 38 2.7
AK137297_1(AK137297|pid:none) Mus musculus adult male urinary bl... 38 2.7
AC007213_9(AC007213|pid:none) Arabidopsis thaliana chromosome 2 ... 38 2.7
(Q54G28) RecName: Full=Probable tyrosine-protein kinase DDB_G029... 38 2.7
AB025536_1(AB025536|pid:none) Lampetra reissneri mRNA for FGFR3/... 38 2.7
BT045462_1(BT045462|pid:none) Salmo salar clone ssal-rgf-522-082... 38 2.7
BT066283_1(BT066283|pid:none) Zea mays full-length cDNA clone ZM... 38 2.7
BT033593_1(BT033593|pid:none) Zea mays full-length cDNA clone ZM... 38 2.7
EU972914_1(EU972914|pid:none) Zea mays clone 389982 unknown mRNA. 37 3.5
FB901857_1(FB901857|pid:none) Sequence 121130 from Patent WO2008... 37 3.5
(Q54H46) RecName: Full=Probable serine/threonine-protein kinase ... 37 3.5
M35074_1(M35074|pid:none) Human met oncogene mRNA, 3' end. 37 3.5
BT034824_1(BT034824|pid:none) Zea mays full-length cDNA clone ZM... 37 3.5
FN357342_24(FN357342|pid:none) Schistosoma mansoni genome sequen... 37 3.5
FB796684_1(FB796684|pid:none) Sequence 15957 from Patent WO20080... 37 3.5
EF014122_1(EF014122|pid:none) Synthetic construct flag-tagged pr... 37 4.5
AL096859_4(AL096859|pid:none) Arabidopsis thaliana DNA chromosom... 37 4.5
(Q86HG9) RecName: Full=Probable serine/threonine-protein kinase ... 37 4.5
FB830016_1(FB830016|pid:none) Sequence 49289 from Patent WO20080... 37 4.5
CU928167_303(CU928167|pid:none) Kluyveromyces thermotolerans str... 37 4.5
DQ294402_1(DQ294402|pid:none) Rattus norvegicus strain Sprague-D... 37 5.9
AY347832_1(AY347832|pid:none) Malus x domestica clone 17-4 prote... 37 5.9
EF043691_1(EF043691|pid:none) Synthetic construct clone ATCC 103... 37 5.9
(P41243) RecName: Full=Megakaryocyte-associated tyrosine-protein... 37 5.9
DQ508131_1(DQ508131|pid:none) Synthetic construct flag-tagged pr... 37 5.9
DQ672264_1(DQ672264|pid:none) Nicotiana tabacum DSK2 mRNA, compl... 37 5.9
(Q54L00) RecName: Full=Probable LIM domain-containing serine/thr... 37 5.9
EU962657_1(EU962657|pid:none) Zea mays clone 244498 hypothetical... 36 7.8
AM451323_2(AM451323|pid:none) Vitis vinifera contig VV78X238983.... 36 7.8
(Q7T6X2) RecName: Full=Putative serine/threonine-protein kinase/... 36 7.8
FN357714_17(FN357714|pid:none) Schistosoma mansoni genome sequen... 36 7.8
FM992692_21(FM992692|pid:none) Candida dubliniensis CD36 chromos... 36 7.8
FB830020_1(FB830020|pid:none) Sequence 49293 from Patent WO20080... 36 7.8
DQ900931_1(DQ900931|pid:none) Ciona intestinalis gamma-carboxygl... 36 7.8
(Q54R58) RecName: Full=Probable tyrosine-protein kinase DDB_G028... 36 7.8
FB918146_1(FB918146|pid:none) Sequence 137419 from Patent WO2008... 36 7.8

>(Q54EM1) RecName: Full=Probable serine/threonine-protein kinase
DDB_G0291664; EC=2.7.11.1;
Length = 959

Score = 384 bits (987), Expect(2) = e-108
Identities = 194/241 (80%), Positives = 194/241 (80%)
Frame = +2

Query: 2075 CSGDEKTLNHYNEKSEIYSLGIILWELICIAMTGTYVSPKIALFQNEVDFSIWIHKDYRF 2254
CSGDEKTLNHYNEKSEIYSLGIILWELICIAMTGTYVSPKIALFQNEVDFSIWIHKDYRF
Sbjct: 660 CSGDEKTLNHYNEKSEIYSLGIILWELICIAMTGTYVSPKIALFQNEVDFSIWIHKDYRF 719

Query: 2255 SFPIGTPQSLVKLITSMCLPCRDRRPTVHQILDEVGIIETEFLSNRGIKGEQTYSGLECW 2434
SFPIGTPQSLVKLITSMCLPCRDRRPTVHQILDEVGIIETEFLSNRGIKGEQTYSGLECW
Sbjct: 720 SFPIGTPQSLVKLITSMCLPCRDRRPTVHQILDEVGIIETEFLSNRGIKGEQTYSGLECW 779

Query: 2435 REFNFSKQNVFGISISNLHDTEYKAVXXXXXXXXXXXXXLLMKRYLDNSNFVVELINPNG 2614
REFNFSKQNVFGISISNLHDTEYKAV LLMKRYLDNSNFVVELINPNG
Sbjct: 780 REFNFSKQNVFGISISNLHDTEYKAVNKYNYTSYNNKNSLLMKRYLDNSNFVVELINPNG 839

Query: 2615 IXXXXXXXXXXXXXXXXXXXXXXGEYYFDMGKFLXXXXXXXXXXXXYYKMLQKYRELGLL 2794
I GEYYFDMGKFL YYKMLQKYRELGLL
Sbjct: 840 IFKFKSFFEKEKLLYLKLKSTYKGEYYFDMGKFLTTIIQIHQITEIYYKMLQKYRELGLL 899

Query: 2795 R 2797
R
Sbjct: 900 R 900

Score = 35.0 bits (79), Expect(2) = e-108
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1

Query: 2035 IGTLWYRCPRLGD 2073
IGTLWYRCPRLGD
Sbjct: 647 IGTLWYRCPRLGD 659

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,416,035,265
Number of extensions: 56972175
Number of successful extensions: 145000
Number of sequences better than 10.0: 135
Number of HSP's gapped: 143778
Number of HSP's successfully gapped: 138
Length of query: 1053
Length of database: 1,051,180,864
Length adjustment: 139
Effective length of query: 914
Effective length of database: 601,299,163
Effective search space: 549587434982
Effective search space used: 549587434982
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.81 gvh: 0.31 alm: 0.30 top: 0.63 tms: 0.07 mit: 0.36 mip: 0.05
nuc: 0.17 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.05 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

48.0 %: nuclear
28.0 %: cytoplasmic
8.0 %: mitochondrial
8.0 %: Golgi
4.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U15624-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 7
AF (FL, S) 2
SL (DIR, L) 2
SS (DIR, S) 2
SH (FL, L) 5
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0