>Contig-U15613-1 (Contig-U15613-1Q) /CSM_Contig/Contig-U15613-1Q.Seq.d
CACTGTTGGCCTACTGGTAATAATAATAAAAAGTTTTAATACACTATTAA
AAATATATATATTATAATTGTCAATTTTTATTACGTATAATTTATTTGTT
TATATATTATTAATTATTAAAAAAAATAATAATTTATTTGTTTATATATT
AATAATAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAGGNGANAAAAAAAA----------CGGAATTCC
CGGGTCGACCCACGCGTCCGCCCATTAAAGAAGGTGTTAAAAATGTTACT
TTAACCTATGAAAACATTGTCTTTAGAGAATGGGAAAAATACAAATTCAT
TGAAGTTTCTTTAATTGACCCATCATTAGATCCAAATAATTCAACTGAAA
TTAATAATGCAATTTCAAATATTAATGGTAGTGGTGATGTTGGTAATGGT
GGTGGTGGTGGTGTTGTTAAAATTATATTTAGAAAAACTACAATTAAAAA
TATGATTGGTGAAGATGTTGATTCAATTTCAACACAAGTTAATAGAATTG
GTTGGTTTGAATTAATATTTGAAGATTATTGTAAATTTGATTTTACATCT
GGTTCAAATATATTCAATATTAGAAATACAAAGTTGTACATTAGAGAACA
TACAATCGTCCAAAGTGGTAGAGCCAATGAAGCATTTATCAATGCTAAAG
GTTGTTTGATTGATATCTCTGATTCCTTCTTTAGTCAATATTAAGCTAGA
GAAGGTTTATTGTATACCGCTGACTCTGATGTAAATATTACCAATGTTCA
ATTTAGTAATAATTTCGGTACTTTCTCTTCAATCATTCATTACTCTGCCA
TTATAACCAATTTAAATATTACCCATTGTTACTTTCAAAATAATATGGTT
ACTAATAATGGTGGTAAAGGAGATTCAATCATTATCGTAAAGAATGAGGG
TAAAGAAGTTGAAAACAATCATCATGGAGTAACACCAAAACAAGAGATTA
TCAGTGTCCAAAATCAATCCAATAAAGCCTCAATTATAAATTGTACTTTT
ATTGAAAATAATACACCAAAAATCATTGGATTCCCGGTATCATTTGGGTG
TACAATTCAATAATGTTGATTGAAGGTGGTGAAATTAATTCAAATCCAAT
CAATGATCATGGTCCAAGTATTATCGCTCATCATTCAACCGTTGAAATTA
GAAAAACTAAATTGATTAGTACAAATCCATCAATAACAAGTGAATTCCCA
TACATTGTTTCAAATTATGCTAGTGTTCGAGTCCAAGAGATAACATTATC
ACCAACTACTCAATTACCATTCAAATGTGATAGTTCCTTAATTTTATTTG
ATTATGCCTCAAGTATAAATGCATCTTTGTTTGTTTGTAATAATATTCAT
GGAGATGCTTATAATAGTACCTATGCAAATATTGTCTCTGGTAATGATAT
CAATTCATTCTCTTGTGAAATCATTCAATTCGATCCAAATATTCAACCAC
CATCTAGATCAACTCCAAATATAGTCTGTTCAAATGAATCTCATCATACC
TATAAATATGATTTTAGATTAACAAAAGCCATCATTGCTGTCATTGTCAT
TGCTTGTACTTTCCTCACTTTAATTCCTGTGGTTTTATTAGCAAATAAAA
TTTATAAAAATCTTTATAGAGGTTATGCTCCACATGAAAGTGAAGAACCT
GATCTTGAAGAATTTAGTATCAATAATAATAATAATCAAACTACTAATGG
TGATAGAAATGATGGTTTTCATGATGTTTTATATGAAGATGAAACTCCTG
CAAATAAATCATTATTAAAATAAATAATAATTAATAATTAATAACTAATA
ATTAAAAAATAAACAATATTTAATTTTTCTTAAAATAAATAAATAAAAAT
AATTATATCATATAATATTAAAAAAAAAAAAA

est1=CHI855Z,-81,80
est2=AHD455F,1,173
est3=AFL384F,3,173
est4=AHM458F,10,227
est5=AHD301F,16,173
est6=AHE610F,16,230
est7=AHG833F,16,230
est8=AHI822F,16,231
est9=AHN133F,16,228
est10=AHN819F,16,228
est11=CHG294F,22,170
est12=CHR140F,26,228
est13=AHP160F,28,173
est14=AHP419F,38,173
est15=AFK107F,39,173
est16=AHD557F,39,173
est17=AFI429F,40,226
est18=AHM542F,41,231
est19=CHI686F,42,222
est20=CHS440F,42,170
est21=AHH338F,43,223
est22=AHK491F,43,226
est23=AHA285F,46,227
est24=AHH481F,46,173
est25=AHI735F,46,226
est26=AHN534F,46,227
est27=AHO734F,46,226
est28=CHH335F,46,219
est29=CHK156F,48,170
est30=AHB133F,49,226
est31=AHD127F,49,231
est32=AHO709F,49,173
est33=AHQ452F,54,226
est34=CHF531F,54,223
est35=CHG416F,54,226
est36=AHE666F,55,229
est37=AHH341F,55,226
est38=AHH438F,55,227
est39=AHI673F,55,227
est40=AHL383F,55,226
est41=AHD769F,56,226
est42=CHI175F,56,170
est43=CHI179F,56,222
est44=CHN489F,56,226
est45=AFK809F,57,173
est46=AFO488F,57,173
est47=AHC428F,57,173
est48=AHD258F,57,173
est49=AHF417F,57,230
est50=AHH436F,57,227
est51=AHO568F,57,224
est52=AHO581F,57,173
est53=AHQ495F,57,231
est54=AHQ688F,57,173
est55=AHB110F,59,227
est56=AHG161F,59,227
est57=AHJ769F,59,173
est58=AHQ285F,59,227
est59=AHL858F,60,227
est60=AHL405F,64,229
est61=AHJ419F,66,226
est62=AHN567F,66,227
est63=AHP364F,66,227
est64=AHK121F,70,173
est65=AHI477F,87,227
est66=SSH567F,90,206
est67=SLJ784X,232,1189
est68=SLJ784F,261,554
est69=AFO488Z,319,882
est70=AFI726F,579,962
est71=AHJ419Z,1027,1651
est72=AHD769Z,1058,1677
est73=AHF417Z,1059,1676
est74=AHB517Z,1061,1715
est75=CHG294Z,1061,1603
est76=CHI179Z,1061,1673
est77=SHB340Z,1061,1319
est78=AHM542Z,1062,1676
est79=AHE718Z,1067,1679
est80=AHA285Z,1071,1660
est81=AHD127Z,1074,1667
est82=AHC746Z,1075,1773
est83=AHH481Z,1076,1668
est84=AHD258Z,1077,1699
est85=AHH436Z,1089,1708
est86=AHB555Z,1101,1671
est87=AHK121Z,1101,1714
est88=CHR140Z,1101,1666
est89=AHH341Z,1116,1672
est90=AHM458Z,1116,1644
est91=AHC428Z,1117,1676
est92=CHI686Z,1117,1655
est93=AHI673Z,1118,1673
est94=AHL383Z,1118,1674
est95=AHH338Z,1119,1700
est96=AHN567Z,1119,1684
est97=AHI645Z,1120,1794
est98=AHH438Z,1121,1706
est99=AHK491Z,1121,1690
est100=AHO766Z,1122,1716
est101=AHB133Z,1123,1699
est102=AHQ285Z,1123,1708
est103=AHQ688Z,1124,1705
est104=AHQ713Z,1124,1699
est105=AHL858Z,1126,1678
est106=AHO509Z,1126,1697
est107=AHK840Z,1127,1627
est108=CHG416Z,1127,1663
est109=AFI731Z,1128,1877
est110=AHP618Z,1128,1514
est111=AHQ452Z,1129,1673
est112=CHS440Z,1131,1655
est113=SHE236Z,1133,1701
est114=AHJ769Z,1135,1677
est115=AHF412Z,1137,1806
est116=AHI477Z,1137,1730
est117=AHL405Z,1137,1710
est118=CHI375Z,1137,1704
est119=AHB110Z,1138,1677
est120=AHC231Z,1138,1710
est121=AHN819Z,1138,1665
est122=AFK809Z,1139,1681
est123=AHI822Z,1139,1664
est124=AHL310Z,1139,1730
est125=AHO880Z,1140,1702
est126=CHL170Z,1141,1775
est127=AFL384Z,1142,1666
est128=AHQ495Z,1142,1676
est129=AHI379Z,1166,1890
est130=AHE666Z,1167,1660
est131=AHP160Z,1169,1658
est132=SLD367E,1191,1902
est133=AHB501Z,1197,1677
est134=AHO534Z,1197,1697
est135=AHI735Z,1205,1687
est136=AHG445Z,1207,1744
est137=AHN133Z,1207,1668
est138=AHN534Z,1207,1696
est139=AFI429Z,1210,1675
est140=AHG472Z,1212,1663
est141=AFK107Z,1214,1676
est142=CHN489Z,1268,1694
est143=AHP419Z,1271,1704
est144=AHP620Z,1273,1680
est145=SSM286Z,1273,1894
est146=AHG833Z,1274,1659
est147=CHF531Z,1274,1696
est148=AHP157Z,1277,1865
est149=AHG161Z,1278,1702
est150=AHP869Z,1278,1716
est151=AHP364Z,1346,1684
est152=CHK156Z,1347,1685
est153=SSH567Z,1392,1921
est154=SSB413Z,1398,1905
est155=SLJ784Z,1703,1876

PIKEGVKNVTLTYENIVFREWEKYKFIEVSLIDPSLDPNNSTEINNAISNINGSGDVGNG
GGGGVVKIIFRKTTIKN---

---DVDSISTQVNRIGWFELIFEDYCKFDFTSGSNIFNIRNTKLYIREHTIVQSGRANEA
FINAKGCLIDISDSFFSQY*aregllytadsdvnitnvqfsnnfgtfssiihysaiitnl
nithcyfqnnmvtnnggkgdsiiivknegkevennhhgvtpkqeiisvqnqsnkasiinc
tfienntpkiigfpvsfgctiq*c*lkvvkliqiqsmimvqvlsliiqplklekln*lvq
ihq*qvnshtlfqimlvfeskr*hyhqllnyhsnvivp*fylimpqv*mhlclfviifme
mliivpmqilslvmisihslvksfnsiqifnhhldqlqi*svqmnliipinmild*qkps
llslsllvlssl*flwfy*qikfikifievmlhmkvknlilknlvsiiiiikllmviemm
vfmmfymkmkllqinhy*nk**liinn**lknkqyliflkink*k*lyhiilkkkk

Frame A:
PIKEGVKNVTLTYENIVFREWEKYKFIEVSLIDPSLDPNNSTEINNAISNINGSGDVGNG
GGGGVVKIIFRKTTIKN---

---kmliqfqhklielvgln*ylkiivnlilhlvqiysileiqsctleniqsskvvepmk
hlsmlkvv*lislipslvniklekvycipltlm*ilpmfnlviisvlslqsfitlpl*pi
*ilpivtfkiiwllimvvkeiqsls*rmrvkklktiime*hqnkrlsvskinpikpql*i
vlllkiihqksldsryhlgvqfnnvd*rw*n*fksnq*swskyyrssfnr*n*kn*id*y
ksinnk*ipihcfklc*cssprdniitnysitiqm**flnfi*lclkykcifvcl**ysw
rcl**ylckyclw**yqfill*nhsirskystti*inskyslfk*issyl*i*f*inksh
hcchchclyfphfnscgfisk*nl*ksl*rlcst*k*rt*s*ri*yq****sny*w**k*
wfs*cfi*r*nsck*iiikinnn**litnn*kinni*fflk*inknnyii*y*kkk

Frame B:
plkkvlkmll*pmktlslengkntnslkfl*lthh*iqiiqlklimqfqilmvvvmlvmv
vvvvllklyleklqlk---

---rc*fnfnts**nwlv*ini*rll*i*fyiwfkyiqy*kykvvh*rtynrpkw*sq*s
iyqc*rlfd*yl*fll*sils*rrfivyr*l*ckyyqcsi***fryflfnhsllchynqf
kyyplllsk*ygy**ww*rrfnhyrke*g*rs*kqsswsntktrdyqcpksiq*slnykl
yfy*k*ytknhwipgiiwvynsimlieggeinsnpindhgpsiiahhstveirktklist
npsitsefpyivsnyasvrvqeitlspttqlpfkcdsslilfdyassinaslfvcnnihg
daynstyanivsgndinsfsceiiqfdpniqppsrstpnivcsneshhtykydfrltkai
iaviviactfltlipvvllankiyknlyrgyapheseepdleefsinnnnnqttngdrnd
gfhdvlyedetpanksllk*iiinn**liikk*tifnfs*nk*ikiiisynikkkk

Frame C:
h*rrc*kcyfnl*khcl*rmgkiqih*sffn*piirsk*fn*n**cnfky*w*w*cw*ww
wwwcc*nyi*knyn*k---

---DVDSISTQVNRIGWFELIFEDYCKFDFTSGSNIFNIRNTKLYIREHTIVQSGRANEA
FINAKGCLIDISDSFFSQY*aregllytadsdvnitnvqfsnnfgtfssiihysaiitnl
nithcyfqnnmvtnnggkgdsiiivknegkevennhhgvtpkqeiisvqnqsnkasiinc
tfienntpkiigfpvsfgctiq*c*lkvvkliqiqsmimvqvlsliiqplklekln*lvq
ihq*qvnshtlfqimlvfeskr*hyhqllnyhsnvivp*fylimpqv*mhlclfviifme
mliivpmqilslvmisihslvksfnsiqifnhhldqlqi*svqmnliipinmild*qkps
llslsllvlssl*flwfy*qikfikifievmlhmkvknlilknlvsiiiiikllmviemm
vfmmfymkmkllqinhy*nk**liinn**lknkqyliflkink*k*lyhiilkkkk

Query= Contig-U15613-1 (Contig-U15613-1Q)
/CSM_Contig/Contig-U15613-1Q.Seq.d
         (1662 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15613-1 (Contig-U15613-1Q) /CSM_Contig/Conti...  2652  0.0
Contig-U15786-1 (Contig-U15786-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U16101-1 (Contig-U16101-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U15102-1 (Contig-U15102-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U01641-1 (Contig-U01641-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U16435-1 (Contig-U16435-1Q) /CSM_Contig/Conti...    40  0.011
Contig-U12547-1 (Contig-U12547-1Q) /CSM_Contig/Conti...    40  0.011
Contig-U11380-1 (Contig-U11380-1Q) /CSM_Contig/Conti...    40  0.011
Contig-U10719-1 (Contig-U10719-1Q) /CSM_Contig/Conti...    40  0.011
Contig-U15758-1 (Contig-U15758-1Q) /CSM_Contig/Conti...    38  0.043

>Contig-U15613-1 (Contig-U15613-1Q) /CSM_Contig/Contig-U15613-1Q.Seq.d
          Length = 1662

 Score = 2652 bits (1338), Expect = 0.0
 Identities = 1338/1338 (100%)
 Strand = Plus / Plus

                                                                        
Query: 194  ttgttaaaattatatttagaaaaactacaattaaaaatatgattggtgaagatgttgatt 253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194  ttgttaaaattatatttagaaaaactacaattaaaaatatgattggtgaagatgttgatt 253

                                                                        
Query: 254  caatttcaacacaagttaatagaattggttggtttgaattaatatttgaagattattgta 313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254  caatttcaacacaagttaatagaattggttggtttgaattaatatttgaagattattgta 313

                                                                        
Query: 314  aatttgattttacatctggttcaaatatattcaatattagaaatacaaagttgtacatta 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314  aatttgattttacatctggttcaaatatattcaatattagaaatacaaagttgtacatta 373

                                                                        
Query: 374  gagaacatacaatcgtccaaagtggtagagccaatgaagcatttatcaatgctaaaggtt 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374  gagaacatacaatcgtccaaagtggtagagccaatgaagcatttatcaatgctaaaggtt 433

                                                                        
Query: 434  gtttgattgatatctctgattccttctttagtcaatattaagctagagaaggtttattgt 493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434  gtttgattgatatctctgattccttctttagtcaatattaagctagagaaggtttattgt 493

                                                                        
Query: 494  ataccgctgactctgatgtaaatattaccaatgttcaatttagtaataatttcggtactt 553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494  ataccgctgactctgatgtaaatattaccaatgttcaatttagtaataatttcggtactt 553

                                                                        
Query: 554  tctcttcaatcattcattactctgccattataaccaatttaaatattacccattgttact 613
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554  tctcttcaatcattcattactctgccattataaccaatttaaatattacccattgttact 613

                                                                        
Query: 614  ttcaaaataatatggttactaataatggtggtaaaggagattcaatcattatcgtaaaga 673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614  ttcaaaataatatggttactaataatggtggtaaaggagattcaatcattatcgtaaaga 673

                                                                        
Query: 674  atgagggtaaagaagttgaaaacaatcatcatggagtaacaccaaaacaagagattatca 733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674  atgagggtaaagaagttgaaaacaatcatcatggagtaacaccaaaacaagagattatca 733

                                                                        
Query: 734  gtgtccaaaatcaatccaataaagcctcaattataaattgtacttttattgaaaataata 793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734  gtgtccaaaatcaatccaataaagcctcaattataaattgtacttttattgaaaataata 793

                                                                        
Query: 794  caccaaaaatcattggattcccggtatcatttgggtgtacaattcaataatgttgattga 853
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794  caccaaaaatcattggattcccggtatcatttgggtgtacaattcaataatgttgattga 853

                                                                        
Query: 854  aggtggtgaaattaattcaaatccaatcaatgatcatggtccaagtattatcgctcatca 913
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854  aggtggtgaaattaattcaaatccaatcaatgatcatggtccaagtattatcgctcatca 913

                                                                        
Query: 914  ttcaaccgttgaaattagaaaaactaaattgattagtacaaatccatcaataacaagtga 973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  ttcaaccgttgaaattagaaaaactaaattgattagtacaaatccatcaataacaagtga 973

                                                                        
Query: 974  attcccatacattgtttcaaattatgctagtgttcgagtccaagagataacattatcacc 1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974  attcccatacattgtttcaaattatgctagtgttcgagtccaagagataacattatcacc 1033

                                                                        
Query: 1034 aactactcaattaccattcaaatgtgatagttccttaattttatttgattatgcctcaag 1093
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 aactactcaattaccattcaaatgtgatagttccttaattttatttgattatgcctcaag 1093

                                                                        
Query: 1094 tataaatgcatctttgtttgtttgtaataatattcatggagatgcttataatagtaccta 1153
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 tataaatgcatctttgtttgtttgtaataatattcatggagatgcttataatagtaccta 1153

                                                                        
Query: 1154 tgcaaatattgtctctggtaatgatatcaattcattctcttgtgaaatcattcaattcga 1213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 tgcaaatattgtctctggtaatgatatcaattcattctcttgtgaaatcattcaattcga 1213

                                                                        
Query: 1214 tccaaatattcaaccaccatctagatcaactccaaatatagtctgttcaaatgaatctca 1273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 tccaaatattcaaccaccatctagatcaactccaaatatagtctgttcaaatgaatctca 1273

                                                                        
Query: 1274 tcatacctataaatatgattttagattaacaaaagccatcattgctgtcattgtcattgc 1333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 tcatacctataaatatgattttagattaacaaaagccatcattgctgtcattgtcattgc 1333

                                                                        
Query: 1334 ttgtactttcctcactttaattcctgtggttttattagcaaataaaatttataaaaatct 1393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 ttgtactttcctcactttaattcctgtggttttattagcaaataaaatttataaaaatct 1393

                                                                        
Query: 1394 ttatagaggttatgctccacatgaaagtgaagaacctgatcttgaagaatttagtatcaa 1453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 ttatagaggttatgctccacatgaaagtgaagaacctgatcttgaagaatttagtatcaa 1453

                                                                        
Query: 1454 taataataataatcaaactactaatggtgatagaaatgatggttttcatgatgttttata 1513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 taataataataatcaaactactaatggtgatagaaatgatggttttcatgatgttttata 1513

                              
Query: 1514 tgaagatgaaactcctgc 1531
            ||||||||||||||||||
Sbjct: 1514 tgaagatgaaactcctgc 1531


 Score =  303 bits (153), Expect = 5e-82
 Identities = 153/153 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccattaaagaaggtgttaaaaatgttactttaacctatgaaaacattgtctttagagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cccattaaagaaggtgttaaaaatgttactttaacctatgaaaacattgtctttagagaa 60

                                                                       
Query: 61  tgggaaaaatacaaattcattgaagtttctttaattgacccatcattagatccaaataat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgggaaaaatacaaattcattgaagtttctttaattgacccatcattagatccaaataat 120

                                            
Query: 121 tcaactgaaattaataatgcaatttcaaatatt 153
           |||||||||||||||||||||||||||||||||
Sbjct: 121 tcaactgaaattaataatgcaatttcaaatatt 153


 Score = 34.2 bits (17), Expect = 0.67
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 1633 ttatatcatataatatt 1649
            |||||||||||||||||
Sbjct: 1633 ttatatcatataatatt 1649


>Contig-U15786-1 (Contig-U15786-1Q) /CSM_Contig/Contig-U15786-1Q.Seq.d
          Length = 1595

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1445 tagtatcaataataataataat 1466
            ||||||||||||||||||||||
Sbjct: 412  tagtatcaataataataataat 433


>Contig-U16101-1 (Contig-U16101-1Q) /CSM_Contig/Contig-U16101-1Q.Seq.d
          Length = 3616

 Score = 42.1 bits (21), Expect = 0.003
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 227  aaaatatgattggtgaagatgttga 251
            ||||||| |||||||||||||||||
Sbjct: 3562 aaaatattattggtgaagatgttga 3586


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 56,829
Number of Sequences: 8402
Number of extensions: 56829
Number of successful extensions: 16514
Number of sequences better than 10.0: 615
length of query: 1662
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1646
effective length of database: 7,941,110
effective search space: 13071067060
effective search space used: 13071067060
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

Query= Contig-U15613-1 (Contig-U15613-1Q) /CSM_Contig/Contig-U15613-1Q.Seq.d
         (1662 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ349408) Dictyostelium discoideum cDNA clone:dda36l11, 3' ...  1330   0.0    1
(BJ344097) Dictyostelium discoideum cDNA clone:dda18n07, 3' ...  1318   0.0    1
(BJ352920) Dictyostelium discoideum cDNA clone:dda48i12, 3' ...  1310   0.0    1
(BJ347161) Dictyostelium discoideum cDNA clone:dda26e10, 3' ...  1300   0.0    1
(BJ350806) Dictyostelium discoideum cDNA clone:dda41h04, 3' ...  1296   0.0    1
(BJ348677) Dictyostelium discoideum cDNA clone:dda34a05, 3' ...  1261   0.0    2
(BJ349747) Dictyostelium discoideum cDNA clone:dda37c16, 3' ...  1223   0.0    1
(BJ352790) Dictyostelium discoideum cDNA clone:dda47n19, 3' ...  1221   0.0    1
(BJ380667) Dictyostelium discoideum cDNA clone:ddc38m19, 3' ...  1215   0.0    1
(BJ350080) Dictyostelium discoideum cDNA clone:dda38j17, 3' ...  1213   0.0    1
(BJ350780) Dictyostelium discoideum cDNA clone:dda41b06, 3' ...  1211   0.0    1
(BJ353688) Dictyostelium discoideum cDNA clone:dda51i05, 3' ...  1207   0.0    1
(BJ352009) Dictyostelium discoideum cDNA clone:dda45h10, 3' ...  1199   0.0    1
(BJ350489) Dictyostelium discoideum cDNA clone:dda40d05, 3' ...  1189   0.0    1
(BJ382408) Dictyostelium discoideum cDNA clone:ddc44k17, 3' ...  1181   0.0    1
(BJ355268) Dictyostelium discoideum cDNA clone:dda56c11, 3' ...  1181   0.0    1
(BJ352771) Dictyostelium discoideum cDNA clone:dda47j20, 3' ...  1170   0.0    1
(BJ354251) Dictyostelium discoideum cDNA clone:dda53d03, 3' ...  1166   0.0    1
(BJ349674) Dictyostelium discoideum cDNA clone:dda37e07, 3' ...  1166   0.0    1
(BJ352136) Dictyostelium discoideum cDNA clone:dda45b22, 3' ...  1156   0.0    1
(BJ352028) Dictyostelium discoideum cDNA clone:dda45l10, 3' ...  1152   0.0    1
(BJ357863) Dictyostelium discoideum cDNA clone:dda64o22, 3' ...  1144   0.0    1
(BJ347996) Dictyostelium discoideum cDNA clone:dda31i22, 3' ...  1144   0.0    1
(BJ356506) Dictyostelium discoideum cDNA clone:dda60d17, 3' ...  1136   0.0    1
(BJ353125) Dictyostelium discoideum cDNA clone:dda49f06, 3' ...  1134   0.0    2
(BJ357612) Dictyostelium discoideum cDNA clone:dda64j03, 3' ...  1132   0.0    1
(BJ354281) Dictyostelium discoideum cDNA clone:dda53j02, 3' ...  1128   0.0    1
(BJ405623) Dictyostelium discoideum cDNA clone:dds32g10, 3' ...  1126   0.0    1
(BJ349111) Dictyostelium discoideum cDNA clone:dda35m08, 3' ...  1126   0.0    1
(BJ357535) Dictyostelium discoideum cDNA clone:dda63i22, 3' ...  1124   0.0    2
(BJ356328) Dictyostelium discoideum cDNA clone:dda60a03, 3' ...  1122   0.0    1
(BJ352027) Dictyostelium discoideum cDNA clone:dda45l09, 3' ...  1116   0.0    1
(BJ355888) Dictyostelium discoideum cDNA clone:dda58e17, 3' ...  1112   0.0    1
(BJ356639) Dictyostelium discoideum cDNA clone:dda60p20, 3' ...  1108   0.0    1
(BJ348879) Dictyostelium discoideum cDNA clone:dda34m13, 3' ...  1108   0.0    1
(BJ380630) Dictyostelium discoideum cDNA clone:ddc38f19, 3' ...  1104   0.0    1
(BJ353900) Dictyostelium discoideum cDNA clone:dda51f24, 3' ...  1098   0.0    1
(BJ349084) Dictyostelium discoideum cDNA clone:dda35h08, 3' ...  1098   0.0    1
(BJ348437) Dictyostelium discoideum cDNA clone:dda33a09, 3' ...  1098   0.0    2
(BJ351984) Dictyostelium discoideum cDNA clone:dda45b11, 3' ...  1094   0.0    1
(BJ354497) Dictyostelium discoideum cDNA clone:dda53f21, 3' ...  1092   0.0    1
(BJ353028) Dictyostelium discoideum cDNA clone:dda48a20, 3' ...  1092   0.0    1
(BJ354717) Dictyostelium discoideum cDNA clone:dda54d16, 3' ...  1086   0.0    1
(BJ385878) Dictyostelium discoideum cDNA clone:ddc56o09, 3' ...   904   0.0    2
(BJ380962) Dictyostelium discoideum cDNA clone:ddc39k22, 3' ...  1068   0.0    1
(BJ353555) Dictyostelium discoideum cDNA clone:dda50j17, 3' ...  1068   0.0    1
(BJ343087) Dictyostelium discoideum cDNA clone:dda22b04, 3' ...  1068   0.0    1
(BJ379242) Dictyostelium discoideum cDNA clone:ddc34p04, 3' ...  1065   0.0    1
(BJ348368) Dictyostelium discoideum cDNA clone:dda33c03, 3' ...  1063   0.0    1
(BJ351416) Dictyostelium discoideum cDNA clone:dda43j12, 3' ...  1053   0.0    1
(BJ379448) Dictyostelium discoideum cDNA clone:ddc34k24, 3' ...  1043   0.0    2
(BJ357445) Dictyostelium discoideum cDNA clone:dda63h14, 3' ...  1047   0.0    1
(BJ357563) Dictyostelium discoideum cDNA clone:dda63n24, 3' ...  1043   0.0    1
(BJ386505) Dictyostelium discoideum cDNA clone:ddc58p10, 3' ...  1041   0.0    1
(BJ355741) Dictyostelium discoideum cDNA clone:dda58f06, 3' ...  1039   0.0    1
(BJ355030) Dictyostelium discoideum cDNA clone:dda55d16, 3' ...  1039   0.0    1
(BJ352856) Dictyostelium discoideum cDNA clone:dda48l06, 3' ...  1035   0.0    1
(AU039023) Dictyostelium discoideum slug cDNA, clone SSM286.     1027   0.0    1
(BJ356801) Dictyostelium discoideum cDNA clone:dda61a15, 3' ...  1021   0.0    1
(BJ345486) Dictyostelium discoideum cDNA clone:dda23h21, 3' ...   880   0.0    2
(BJ356423) Dictyostelium discoideum cDNA clone:dda60c09, 3' ...   977   0.0    1
(BJ354084) Dictyostelium discoideum cDNA clone:dda52p10, 3' ...   967   0.0    1
(BJ355804) Dictyostelium discoideum cDNA clone:dda58c09, 3' ...   963   0.0    1
(BJ352905) Dictyostelium discoideum cDNA clone:dda48f09, 3' ...   950   0.0    1
(BJ348674) Dictyostelium discoideum cDNA clone:dda34a01, 3' ...   946   0.0    1
(BJ356828) Dictyostelium discoideum cDNA clone:dda61g15, 3' ...   940   0.0    1
(BJ350632) Dictyostelium discoideum cDNA clone:dda40c18, 3' ...   936   0.0    1
(BJ355480) Dictyostelium discoideum cDNA clone:dda57a09, 3' ...   902   0.0    1
(BJ344968) Dictyostelium discoideum cDNA clone:dda21m01, 3' ...   900   0.0    1
(BJ346058) Dictyostelium discoideum cDNA clone:dda29p22, 3' ...   724   0.0    2
(BJ351514) Dictyostelium discoideum cDNA clone:dda43p18, 3' ...   888   0.0    1
(BJ343841) Dictyostelium discoideum cDNA clone:dda17j08, 3' ...   876   0.0    2
(BJ357152) Dictyostelium discoideum cDNA clone:dda62j18, 3' ...   866   0.0    1
(BJ356669) Dictyostelium discoideum cDNA clone:dda61f06, 3' ...   856   0.0    1
(BJ384243) Dictyostelium discoideum cDNA clone:ddc48b24, 3' ...   839   0.0    1
(BJ378977) Dictyostelium discoideum cDNA clone:ddc33m07, 3' ...   839   0.0    1
(BJ351479) Dictyostelium discoideum cDNA clone:dda43i15, 3' ...   724   0.0    2
(AU038326) Dictyostelium discoideum slug cDNA, clone SSH567.      791   0.0    1
(BJ356982) Dictyostelium discoideum cDNA clone:dda62g06, 3' ...   783   0.0    1
(AU037088) Dictyostelium discoideum slug cDNA, clone SSB413.      779   0.0    1
(BJ356962) Dictyostelium discoideum cDNA clone:dda62c06, 3' ...   755   0.0    1
(BJ351671) Dictyostelium discoideum cDNA clone:dda44b10, 3' ...   718   0.0    2
(BJ326855) Dictyostelium discoideum cDNA clone:dda18d07, 5' ...   737   0.0    1
(BJ381799) Dictyostelium discoideum cDNA clone:ddc42o13, 3' ...   672   0.0    1
(BJ356872) Dictyostelium discoideum cDNA clone:dda61p15, 3' ...   672   0.0    1
(AU060457) Dictyostelium discoideum slug cDNA, clone SLJ784.      297   e-130  2
(BJ403841) Dictyostelium discoideum cDNA clone:dds26p09, 3' ...   331   e-128  2
(AU061146) Dictyostelium discoideum slug cDNA, clone SLD367.      402   e-107  1
(BJ329785) Dictyostelium discoideum cDNA clone:dda26e10, 5' ...   297   7e-76  1
(AU053843) Dictyostelium discoideum slug cDNA, clone SLJ784.      174   7e-39  1
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    40   0.007  12
(ER396947) 1095344042491 Global-Ocean-Sampling_GS-34-01-01-1...    40   0.014  2
(ER463696) 1092963910875 Global-Ocean-Sampling_GS-35-01-01-1...    40   0.015  2
(CW549243) OA_ABa0066N07.r OA_ABa Oryza australiensis genomi...    38   0.021  3
(BZ072956) lke69g04.b1 B.oleracea002 Brassica oleracea genom...    46   0.025  2
(FC715487) CBBG10162.rev CBBG Lottia gigantea 12,15,18h embr...    42   0.026  2
(FC719431) CBBG12766.fwd CBBG Lottia gigantea 12,15,18h embr...    42   0.027  2
(AL844906) Mouse DNA sequence from clone RP23-371C7 on chrom...    52   0.068  1
(AG516761) Mus musculus molossinus DNA, clone:MSMg01-422F15....    52   0.068  1
(AY198133) Spiroplasma kunkelii strain CR2-3x partial genome...    32   0.092  10
(EU423584) Echinacea atrorubens isolate 255B-094 cellulose s...    46   0.12   2
(AC177089) Strongylocentrotus purpuratus clone R3-4012A24, W...    38   0.12   10
(DT666534) He_wd2a1_97G04_M13R Heliconius erato wing disk 2 ...    40   0.20   2
(AC181428) Strongylocentrotus purpuratus clone R3-50G16, WOR...    50   0.25   7
(AC005323) Homo sapiens chromosome 17, clone hRPK.799_N_11, ...    50   0.27   1
(AC201390) Strongylocentrotus purpuratus clone R3-17I17, WOR...    50   0.27   1
(AC180797) Strongylocentrotus purpuratus clone R3-3073K20, W...    50   0.27   1
(AC178662) Strongylocentrotus purpuratus clone R3-3007H19, W...    50   0.27   1
(AQ024003) CpGR0342A Cryptosporidium parvum genomic random l...    50   0.27   1
(CP000361) Arcobacter butzleri RM4018, complete genome.            38   0.29   18
(AC181314) Strongylocentrotus purpuratus clone R3-4017L11, W...    44   0.46   5
(BX784026) Zebrafish DNA sequence from clone CH211-66P13 in ...    38   0.68   9
(CR974584) Mouse DNA sequence from clone RP23-99K9 on chromo...    44   0.69   10
(EX901704) RS2D234JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ...    42   0.74   2
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    44   0.80   2
(FL412713) 6655891 CERES-CB5 Zea mays cDNA clone 1220066 5',...    44   0.94   2
(CR382399) Plasmodium falciparum chromosome 6, complete sequ...    40   0.99   8
(AB072481) Solanum peruvianum gene for HT-protein, complete ...    48   1.1    1
(AL359633) Human DNA sequence from clone RP11-795J1 on chrom...    48   1.1    1
(AC024909) Homo sapiens 12 BAC RP11-823E8 (Roswell Park Canc...    48   1.1    1
(AC130402) Homo sapiens chromosome 12 clone RP11-11M4, *** S...    48   1.1    1
(AC073888) Homo sapiens chromosome 6 clone RP11-124N8, WORKI...    48   1.1    1
(CU012058) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   1.1    1
(AC180798) Strongylocentrotus purpuratus clone R3-3073M14, W...    48   1.1    1
(AC176023) Strongylocentrotus purpuratus clone R3-18A13, WOR...    48   1.1    1
(AC021903) Homo sapiens clone RP11-11M4, WORKING DRAFT SEQUE...    48   1.1    1
(AQ429355) CITBI-E1-2560K19.TF CITBI-E1 Homo sapiens genomic...    48   1.1    1
(ER831461) PPTET72TF Solanum tuberosum RHPOTKEY BAC ends Sol...    48   1.1    1
(CT336845) Sus scrofa genomic clone CH242-31P18, genomic sur...    48   1.1    1
(B31392) HS-1008-B2-B01-MF.abi CIT Human Genomic Sperm Libra...    48   1.1    1
(BH945972) obu79e08.b1 B.oleracea002 Brassica oleracea genom...    48   1.1    1
(FF483235) G613P6339RF10.T0 Acorn worm blastula/gastrula pCM...    48   1.1    1
(DQ106103) Uncultured bacterium clone ce0_cl60_cn1 60 kDa ch...    48   1.1    1
(CP000776) Campylobacter hominis ATCC BAA-381, complete genome.    48   1.1    1
(BX664715) Zebrafish DNA sequence from clone DKEY-83M2 in li...    40   1.1    6
(AF102575) Dictyostelium discoideum cell surface protein DTF...    38   1.1    4
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont...    32   1.1    11
(EK472257) 1095469459300 Global-Ocean-Sampling_GS-32-01-01-1...    34   1.1    3
(DU628878) OO__Ba0136D19.r OO__Ba Oryza officinalis genomic ...    34   1.2    3
(AC168339) Strongylocentrotus purpuratus clone R3-58F1, WORK...    38   1.3    5
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105...    46   1.3    4
(AR659764) Sequence 805 from patent US 6900016.                    44   1.4    3
(CU407248) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   1.5    10
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         34   1.5    14
(EX899539) RS2BU84JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ...    42   1.5    2
(AC182686) Populus trichocarpa clone Pop1-37M17, complete se...    34   1.7    9
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8...    32   1.7    10
(AE015927) Clostridium tetani E88, complete genome.                32   1.8    2
(AC114258) Dictyostelium discoideum chromosome 2 map complem...    40   1.8    4
(AU053340) Dictyostelium discoideum slug cDNA, clone SLI426.       36   1.8    3
(CR940352) Theileria annulata genomic DNA chromosome 3.            36   1.8    21
(EU947069) Zea mays clone 326712 mRNA sequence.                    44   1.8    2
(DN569850) 92357281 Sea Urchin primary mesenchyme cell cDNA ...    34   1.9    3
(AC215388) Solanum lycopersicum chromosome 2 clone C02HBa012...    36   1.9    7
(AL954676) Zebrafish DNA sequence from clone CH211-86M2.           40   2.0    7
(FB571382) Sequence 249 from Patent EP1865317.                     32   2.1    11
(AC080089) Homo sapiens BAC clone RP11-785J10 from 4, comple...    44   2.1    3
(AP008983) Clostridium phage c-st genomic DNA, complete genome.    32   2.1    12
(BX321904) Zebrafish DNA sequence from clone DKEY-279K15 in ...    38   2.1    5
(AC179981) Strongylocentrotus purpuratus clone R3-18H5, WORK...    36   2.1    2
(AC177104) Strongylocentrotus purpuratus clone R3-4014A16, W...    36   2.2    2
(DW713001) JARO001012G08 001 Bothrops jararaca cDNA, mRNA se...    36   2.2    2
(DW713085) JARO001014H10 001 Bothrops jararaca cDNA, mRNA se...    36   2.2    2
(CU469349) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   2.2    2
(FP003601) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   2.3    5
(CU062572) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   2.4    6
(AF356600) Dictyostelium discoideum filament-interacting pro...    30   2.4    5
(AM429573) Vitis vinifera contig VV79X000445.2, whole genome...    36   2.5    5
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    32   2.6    16
(AM436987) Vitis vinifera contig VV78X058765.2, whole genome...    42   2.6    4
(CU915343) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   2.7    9
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    36   2.8    4
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         32   2.8    20
(BI434841) EST537602 P. infestans-challenged potato leaf, co...    36   2.9    2
(AL157815) Human DNA sequence from clone RP11-306O1 on chrom...    36   2.9    6
(AM452268) Vitis vinifera contig VV78X104049.6, whole genome...    32   2.9    7
(AM285303) Spiroplasma citri GII3-3X chromosome, contig Cont...    36   3.0    8
(AJ859268) Brassica rapa subsp. pekinensis GSS, clone KBrH05...    42   3.0    3
(AC159752) Bos taurus clone CH240-81E11, WORKING DRAFT SEQUE...    36   3.1    10
(ES156826) 185904_2213_0403 Arabidopsis ovule high throughpu...    42   3.2    2
(AX458509) Sequence 55 from Patent WO0246454.                      38   3.2    4
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862...    38   3.3    5
(AC004810) Homo sapiens chromosome Y, clone hCIT.69_H_8, com...    42   3.4    5
(AC147946) Macropus eugenii clone ME_KBa-515M4, WORKING DRAF...    42   3.4    7
(BX005437) Zebrafish DNA sequence from clone CH211-158M21 in...    40   3.4    7
(AY445918) Candida zemplinina mitochondrion, complete genome.      32   3.5    6
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    36   3.6    20
(CU468828) Zebrafish DNA sequence from clone CH73-341P16 in ...    36   3.6    5
(AC136198) Papio anubis clone RP41-457I15, WORKING DRAFT SEQ...    38   3.6    6
(CR855321) Zebrafish DNA sequence from clone CH211-87E10 in ...    42   3.6    4
(AC147961) Medicago truncatula chromosome 7 clone mth2-39i23...    38   3.7    8
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    30   3.8    13
(CU633204) Zebrafish DNA sequence from clone CH73-80E16 in l...    34   3.8    5
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co...    40   3.8    19
(CR936365) Zebrafish DNA sequence from clone CH73-41C10 in l...    34   4.0    8
(BH468081) BOGOZ89TF BOGO Brassica oleracea genomic clone BO...    38   4.1    2
(CR381658) Zebrafish DNA sequence from clone CH211-245M20 in...    46   4.2    1
(BX927389) Zebrafish DNA sequence from clone DKEY-190L1 in l...    46   4.2    1
(BX530406) Zebrafish DNA sequence from clone DKEY-53J24 in l...    46   4.2    1
(AL928851) Zebrafish DNA sequence from clone CH211-244E12 in...    46   4.2    1
(AC103672) Mus musculus chromosome 15, clone RP24-351G3, com...    46   4.2    1
(AC206718) Pongo abelii BAC clone CH276-121E5 from chromosom...    46   4.2    1
(AP008215) Oryza sativa (japonica cultivar-group) genomic DN...    46   4.2    1
(AP006548) Oryza sativa Japonica Group genomic DNA, chromoso...    46   4.2    1
(AL445586) Human DNA sequence from clone RP11-352F21 on chro...    46   4.2    1
(AC157115) Bos taurus clone CH240-65P6, WORKING DRAFT SEQUEN...    46   4.2    1
(AC137467) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    46   4.2    1
(AC127879) Rattus norvegicus clone CH230-50A16, *** SEQUENCI...    46   4.2    1
(AC095820) Rattus norvegicus clone CH230-10A4, *** SEQUENCIN...    46   4.2    1
(CU928791) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   4.2    1
(CU694318) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    46   4.2    1
(CR854901) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   4.2    1
(AC213360) Pongo abelii chromosome 5 clone CH276-426L8, WORK...    46   4.2    1
(AC179668) Strongylocentrotus purpuratus clone R3-3001M21, *...    46   4.2    1
(AC178132) Strongylocentrotus purpuratus clone R3-3078D8, WO...    46   4.2    1
(AC174487) Strongylocentrotus purpuratus clone R3-3120P7, WO...    46   4.2    1
(AC172619) Bos taurus clone CH240-166G17, WORKING DRAFT SEQU...    46   4.2    1
(AC170686) Bos taurus clone CH240-218K8, WORKING DRAFT SEQUE...    46   4.2    1
(AC168444) Strongylocentrotus purpuratus clone R3-39C18, WOR...    46   4.2    1
(AQ710924) HS_5362_A1_E04_T7A RPCI-11 Human Male BAC Library...    46   4.2    1
(EJ435200) 1093015277197 Global-Ocean-Sampling_GS-28-01-01-1...    46   4.2    1
(DU568357) OO__Ba0053C22.f OO__Ba Oryza officinalis genomic ...    46   4.2    1
(CL190313) 104_408_10905997_114_32483_057 Sorghum methylatio...    46   4.2    1
(CC257782) CH261-163E4_Sp6.2 CH261 Gallus gallus genomic clo...    46   4.2    1
(BZ497583) BONEZ21TR BO_1.6_2_KB_tot Brassica oleracea genom...    46   4.2    1
(DY894072) CeleSEQ13564 Cunninghamella elegans pBluescript (...    46   4.2    1
(DY890410) CeleSEQ9408 Cunninghamella elegans pBluescript (E...    46   4.2    1
(DY886952) CeleSEQ2793 Cunninghamella elegans pBluescript (E...    46   4.2    1
(DY885798) CeleSEQ1239 Cunninghamella elegans pBluescript (E...    46   4.2    1
(AU060174) Dictyostelium discoideum slug cDNA, clone SLA514.       46   4.2    1
(CK554264) rswla0_016202.y1 swl Bombyx mori cDNA, mRNA seque...    46   4.2    1
(C24619) Dictyostelium discoideum slug cDNA, clone SL-X014.        46   4.2    1
(BU798011) SJF2ETC11 SJF Schistosoma japonicum cDNA, mRNA se...    46   4.2    1
(AA898177) NCM5B8T3 Mycelial Neurospora crassa cDNA clone NM...    46   4.2    1
(FE257565) CAPH6692.fwd CAPH Naegleria gruberi amoeba stage ...    46   4.2    1
(FE246086) CAPG9233.fwd CAPG Naegleria gruberi amoeba stage ...    46   4.2    1
(DQ106204) Uncultured bacterium clone ce1_cl57_cn1 60 kDa ch...    46   4.2    1
(DQ106053) Uncultured bacterium clone ce0_cl16_cn1 60 kDa ch...    46   4.2    1
(DQ106035) Uncultured bacterium clone ce0_cl0_sn52 60 kDa ch...    46   4.2    1
(DQ106022) Uncultured bacterium clone ce0_cl0_sn102 60 kDa c...    46   4.2    1
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    46   4.2    1
(CP000847) Rickettsia akari str. Hartford, complete genome.        46   4.2    1
(CP000053) Rickettsia felis URRWXCal2, complete genome.            46   4.2    1
(AC177357) Strongylocentrotus purpuratus clone R3-52F10, WOR...    34   4.2    7
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    36   4.3    4
(AC185080) Bos taurus clone CH240-184H7, WORKING DRAFT SEQUE...    44   4.4    7
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    36   4.5    5
(BX890551) Zebrafish DNA sequence from clone CH211-232K18.         42   4.6    7
(X95276) Plasmodium falciparum complete gene map of plastid-...    30   4.7    6
(EY434533) qm_NP41.C11 Atwater quagga mussel gills Dreissena...    36   4.7    3
(CU463029) Zebrafish DNA sequence from clone DKEY-222K23 in ...    44   4.7    5
(CR847943) Zebrafish DNA sequence from clone RP71-26F1 in li...    44   5.0    3
(AC008826) Homo sapiens chromosome 5 clone CTD-2136C6, WORKI...    42   5.0    4
(AM055212) Polyplastron multivesiculatum EST, clone Polyplas...    38   5.1    2
(AC178173) Strongylocentrotus purpuratus clone R3-3082A20, W...    40   5.1    9
(BH246509) BOGAR35TR BOGA Brassica oleracea genomic clone BO...    38   5.4    2
(BH433514) BOGSH83TR BOGS Brassica oleracea genomic clone BO...    38   5.6    2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    34   5.6    21
(AC177128) Strongylocentrotus purpuratus clone R3-4014I14, W...    40   5.7    8
(BH536925) BOHGD95TR BOHG Brassica oleracea genomic clone BO...    38   5.7    2
(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (...    32   5.7    5
(AC174194) Strongylocentrotus purpuratus clone R3-16A6, WORK...    40   5.8    5
(AC106791) Homo sapiens chromosome 5 clone RP11-381K20, comp...    34   5.8    8
(CU457448) S.lycopersicum DNA sequence from clone LE_HBa-8K1...    32   5.9    8
(BX936281) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   6.0    11
(CG920891) MBEND04TF mth2 Medicago truncatula genomic clone ...    40   6.0    2
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   6.1    13
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    38   6.1    3
(AC177251) Strongylocentrotus purpuratus clone R3-43F5, WORK...    38   6.2    5
(AE017243) Mycoplasma hyopneumoniae J, complete genome.            32   6.2    21
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041...    36   6.3    5
(CT016395) KBrH125E03 genomic clone, KBrH (HindIII) BAC libr...    36   6.3    2
(AU266148) Dictyostelium discoideum vegetative cDNA clone:VS...    34   6.4    3
(FB571370) Sequence 237 from Patent EP1865317.                     34   6.4    6
(EK014203) 1092955217709 Global-Ocean-Sampling_GS-31-01-01-1...    38   6.4    3
(DU123051) KBrH104M20R Brassica rapa BAC library KBrH Brassi...    36   6.5    2
(CT573358) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   6.9    5
(CT573486) Zebrafish DNA sequence from clone CH73-362D7 in l...    44   7.0    3
(AC217585) Populus trichocarpa clone POP021-H02, complete se...    40   7.3    8
(AC185354) Populus trichocarpa clone Pop1-100B1, complete se...    34   7.3    7
(CR392346) Zebrafish DNA sequence from clone DKEY-15G17 in l...    36   7.4    7
(AC102219) Mus musculus chromosome 15, clone RP24-96K14, com...    32   7.7    2
(EA684462) Sequence 63341 from patent US 7365185.                  34   7.7    4
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    38   7.8    3
(CR847931) Zebrafish DNA sequence from clone DKEY-182I3 in l...    40   7.9    7
(AC209041) Populus trichocarpa clone POP051-F04, complete se...    32   7.9    2
(AM483159) Vitis vinifera contig VV78X147478.6, whole genome...    44   8.1    3
(AC209585) Solanum lycopersicum DNA sequence from clone LE_H...    40   8.1    9
(AC188119) Trichinella spiralis chromosome UNK clone TS195-1...    36   8.5    5
(AC179932) Strongylocentrotus purpuratus clone R3-3031F8, WO...    36   9.0    6
(ED878935) OA_CBa0032J05.f OA_CBa Oryza australiensis genomi...    38   9.1    3
(DX523447) GH_MBb0049N18f GH_MBb Gossypium hirsutum genomic ...    40   9.1    2
(FP016057) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   9.4    8
(AC004820) Homo sapiens clone DJ0038I10, complete sequence.        34   9.4    7
(CU326392) Medicago truncatula chromosome 5 clone mth2-42c9,...    34   9.4    7
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    40   9.4    20
(AC158374) Medicago truncatula chromosome unknown clone mth2...    38   9.8    7
(AC177731) Strongylocentrotus purpuratus clone R3-1008K3, WO...    40   9.9    5

>(BJ349408) Dictyostelium discoideum cDNA clone:dda36l11, 3' end,
            single read.
          Length = 693

 Score = 1330 bits (671), Expect = 0.0
 Identities = 676/678 (99%)
 Strand = Plus / Minus


Query: 815  cggtatcatttgggtgtacaattcaataatgttgattgaaggtggtgaaattaattcaaa 874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693  cggtatcatttgggtgtacaattcaataatgttgattgaaggtggtgaaattaattcaaa 634


Query: 875  tccaatcaatgatcatggtccaagtattatcgctcatcattcaaccgttgaaattagaaa 934
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 633  tccaatcaatgatcatggtccaagtattatcgctcatcattcaaccattgaaattagaaa 574


Query: 935  aactaaattgattagtacaaatccatcaataacaagtgaattcccatacattgtttcaaa 994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573  aactaaattgattagtacaaatccatcaataacaagtgaattcccatacattgtttcaaa 514


Query: 995  ttatgctagtgttcgagtccaagagataacattatcaccaactactcaattaccattcaa 1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513  ttatgctagtgttcgagtccaagagataacattatcaccaactactcaattaccattcaa 454


Query: 1055 atgtgatagttccttaattttatttgattatgcctcaagtataaatgcatctttgtttgt 1114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453  atgtgatagttccttaattttatttgattatgcctcaagtataaatgcatctttgtttgt 394


Query: 1115 ttgtaataatattcatggagatgcttataatagtacctatgcaaatattgtctctggtaa 1174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393  ttgtaataatattcatggagatgcttataatagtacctatgcaaatattgtctctggtaa 334


Query: 1175 tgatatcaattcattctcttgtgaaatcattcaattcgatccaaatattcaaccaccatc 1234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333  tgatatcaattcattctcttgtgaaatcattcaattcgatccaaatattcaaccaccatc 274


Query: 1235 tagatcaactccaaatatagtctgttcaaatgaatctcatcatacctataaatatgattt 1294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273  tagatcaactccaaatatagtctgttcaaatgaatctcatcatacctataaatatgattt 214


Query: 1295 tagattaacaaaagccatcattgctgtcattgtcattgcttgtactttcctcactttaat 1354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213  tagattaacaaaagccatcattgctgtcattgtcattgcttgtactttcctcactttaat 154


Query: 1355 tcctgtggttttattagcaaataaaatttataaaaatctttatagaggttatgctccaca 1414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153  tcctgtggttttattagcaaataaaatttataaaaatctttatagaggttatgctccaca 94


Query: 1415 tgaaagtgaagaacctgatcttgaagaatttagtatcaataataataataatcaaactac 1474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93   tgaaagtgaagaacctgatcttgaagaatttagtatcaataataataataatcaaactac 34


Query: 1475 taatggtgatagaaatga 1492
            ||||||||||||||| ||
Sbjct: 33   taatggtgatagaaanga 16

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,055,819,047
Number of extensions: 138986698
Number of successful extensions: 16176103
Number of sequences better than 10.0: 301
Length of query: 1662
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1638
Effective length of database: 96,409,374,237
Effective search space: 157918555000206
Effective search space used: 157918555000206
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U15613-1 (Contig-U15613-1Q) /CSM_Contig/Contig-U15613-1Q.Seq.d
         (1662 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FJ235191_1(FJ235191|pid:none) Infectious bronchitis virus isolat...    50   2e-04
DQ059619_1(DQ059619|pid:none) Infectious bronchitis virus isolat...    48   0.001
DQ059620_1(DQ059620|pid:none) Infectious bronchitis virus isolat...    48   0.001
FJ235194_1(FJ235194|pid:none) Infectious bronchitis virus isolat...    47   0.002
CP000102_143(CP000102|pid:none) Methanosphaera stadtmanae DSM 30...    42   0.051
CP000678_266(CP000678|pid:none) Methanobrevibacter smithii ATCC ...    41   0.11
CP000678_461(CP000678|pid:none) Methanobrevibacter smithii ATCC ...    41   0.11
CP000102_948(CP000102|pid:none) Methanosphaera stadtmanae DSM 30...    37   2.8
AL844506_217(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    35   6.3
AE014188_340(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    35   6.3
U48717_1(U48717|pid:none) Cryptosporidium parvum zinc finger pro...    35   8.1
AL844509_581(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    35   8.2

>FJ235191_1(FJ235191|pid:none) Infectious bronchitis virus isolate
           V1/07 spike protein gene, partial cds.
          Length = 542

 Score = 50.4 bits (119), Expect = 2e-04
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
 Frame = +1

Query: 505 SDVNITNVQFSNNFGTFSSIIHYSAIITNLNITHCYFQNNMVTNNGGKGDSIIIVKNEGK 684
           S +N +N QF      FS I  Y        +THCY  N ++ NN G+G+  I  K  G+
Sbjct: 47  SGMNWSNKQFCTAHCNFSDIFVY--------VTHCYASNCVLVNNIGQGNIYIGAKRNGE 98

Query: 685 EVENNHHGVTPKQEIISVQNQSNKASII---NCTFIENNTPKIIGFPVSF 825
            + N    VT   + +S+   +N  S+    N  F  N T  + G  V F
Sbjct: 99  SIFNKTLSVTSYPKFMSLHCVNNATSVYLNGNLVFTSNQTASVTGAGVYF 148

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,143,395,432
Number of extensions: 39243793
Number of successful extensions: 117773
Number of sequences better than 10.0: 12
Number of HSP's gapped: 117544
Number of HSP's successfully gapped: 18
Length of query: 554
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 420
Effective length of database: 617,481,958
Effective search space: 259342422360
Effective search space used: 259342422360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.64  gvh: 0.33  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.27  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 28.0 %: cytoplasmic
	 20.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for Contig-U15613-1 is nuc