>Contig-U15608-1 (Contig-U15608-1Q) /CSM_Contig/Contig-U15608-1Q.Seq.d
ACTGTTGGCCTACTGGTTTTATCGTATTGATATTCCCATACTATTTATTC
AAAAATATTTAGCCAAACCATAAAATGGAATACGATTTAACCAAACAAAT
ATGTTCATTCTTAGATGCACATATGATGCTTCCATTAATTAACTATCTCA
AAGATACTCAACAATATCAAGAGAATGAAATTAATAAAGCAATGGCAGAT
ATTTTATCACAAACTGGTTGTTGTGATTATGCAATCAATGCTTATGAATC
AATTGGTAGAGATACAGCACCACTCCAAGCCAAAAAAACAAGAATTGGTT
GGAGAACTTAATAAATTAAAGGAACAATGTTCATTTGTAACTCAATATAT
TGAATCAAAGAAACAACAAAAAGAACAACAAAAAGAATTAAAAGAACAAC
AAAAAGAACAACAAAAAGAAAAAGATACAGATAAAACTACACCAACTACT
ACAGATGAAACAACTACCACCACCACTACAGCACCAACCACCACCACTAC
TACAACAACAACAACTATTACACCAATTACAGTTATTCCATTTTCACAAT
TATTAGAGAAAATTACACCAGAAATTTTAGATAGTATATATAGATTTTCA
AAATTATTATTTGAGATTGGACAATATGGATCAGCAAGAGAACATTTA--
--------TCAATTATCACCAACCCATCAAAATAAAGACAGAGATTATCA
GCATTATGGGGTATCCTCGAATCAGATATCCTCTCATTGAATTGGGGTCA
AGCAGTTGGTGACATTTCACCATTACAAGATCAAATCGATTCCAATGGTA
CACCAGTTGAACAATTGGGTCAAAGAGCATGGTTAATTCATCGTGCACTC
TTTGTCTACTTTTACAACCCAGAATCACGTTCATCATTGGTTGATTTACT
CTTGGAGGATAAATATTTAAATGCCATTCAAACCACTTGTCCACACATTC
TTCGTTATCTCGCCGTTGCCATCATTGTCAATAAAAAGAAACAACAATCA
AATGTTTTCCAACGTATTTTAAATGCACTCGTACGTGTCGTCGAACAAGA
AGCTTACGTCTATCGTGATCCAATCACTCAATTCATCTCTAGTCTCTTTG
TCAAATTCAACTTTGAAGATGCTCAAGCTCAACTCATTCTCTGTGAAAAA
GTTTTGAATCAATTATCACCAACCCATCAAAATAAAGACAGAGATTATCA
GCATTATGGGGTATCCTCGAATCAGATATCCTCTCATTGAATTGGGGTCA
AGCAGTTGGTGACATTTCACCATTACAAGATCAAATCGATTCCAATGGTA
CACCAGTTGAACAATTGGGTCAAAGAGCATGGTTAATTCATCGTGCACTC
TTTGTCTACTTTTACAACCCAGAATCACGTTCATCATTGGTTGATTTACT
CTTGGAGGATAAATATTTAAATGCCATTCAAACCACTTGTCCACACATTC
TTCGTTATCTCGCCGTTGCCATCATTGTCAATAAAAAGAAACAACAATCA
AATGTTTTCCAACGTATTTTAAATGCACTCGTACGTGTCGTCGAACAAGA
AGCTTACGTCTATCGTGATCCAATCACTCAATTCATCTCTAGTCTCTTTG
TCAAATTCAACTTTGAAGATGCTCAAGCTCAACTCATTCTCTGTGAAAAA
GTTTTGAAAAATGATTTCTTCCTCAATACCTGTGTCGATGAATTCATGGA
AAATGCTCGTGTTTGTGTCTTTGAAACTTATTGTAATATTTTAGAATCAA
TTGATATTGATATGTTATGCAAAAATTTAAGAATTGATCCAGAATCATCA
GAGAAATGGATCGTTGAAGCAATTAGAAATACTAGATTCTCTGCAAAGAT
TGATTCAGCAAATAATCAAATTAAAATGTTTACTCAACATAATTCCTATC
GTCAAGTTATGGATAAGACAAAAGCATTATTTAATCGTGGTATCGAAATG
GTCGTAGGTATCAATGAATCTAGAAGTCAACAAAATAGAAAAGGTGGTGA
TAACCGTAAGAATCAACGTGGTCAAAATAGAAATCAACAAAATCAACAAA
ACCAACAATCTAATGAATCAAATGAAACAACAACAACAACAACAACTGCA
GCAGCAGCAACAACAACAACTACTACAACTGCAACTCCAACTTCCGCTTA
AATTTTATTATTAAAATTTTAATAACACACACTCATCCATCCACCATCAT
CTGAAATAATAAAATCACGCCGCACACTCCGCACCCACATCCGCACCCAC
ATCCGCACCCATCACTTTCACATTTATTCATTCATTCATTTAATATTAAT
ATAGATAGAGATAACGTATATAGATATATAATATCAAATGATACTATTTG
TTGATCGATTTTTATATAAAAAAAGAAAAAAAGTTAAAAAAAAAAATAAA
AAAATAAAAAAAAAAAAATAAAAAACTAAAAATATAATTAAAG

est1=SFC466F,1,504
est2=CFE173F,17,562
est3=VHB534F,17,634
est4=VHM811F,17,633
est5=AFI289F,24,648
est6=CHC705F,24,637
est7=SFK440F,24,637
est8=AFI289H,649,1648
est9=AFI289Z,1536,2230
est10=VHB534Z,1637,2321
est11=VFG167Z,1659,2353
est12=VFA355Z,1735,2327
est13=VFG684Z,1756,2296
est14=VFE495Z,1830,2315
est15=VSB252Z,1836,2395
est16=CFE173Z,1841,2304
est17=VSE734Z,1866,2433

tvgllvlsy*yshtiyskifsqtikwnti*pnkyvhs*mhi*cfh*LTISKILNNIKRMK
LIKQWQIFYHKLVVVIMQSMLMNQLVEIQHHSKPKKQELVGELNKLKEQCSFVTQYIESK
KQQKEQQKELKEQQKEQQKEKDTDKTTPTTTDETTTTTTTAPTTTTTTTTTTITPITVIP
FSQLLEKITPEILDSIYRFSKLLFEIGQYGSAREHL---

---NYHQPIKIKTEIISIMGYPRIRYPLIELGSSSW*hftitrsnrfqwyts*tigsksm
vnssctlclllqpritfiig*ftlgg*ifkchsnhlsthsslsrrchhcq*kettikcfp
tyfkctrtcrrtrslrls*snhsihl*slcqiql*rcsssthsl*ksfesiitnpsk*rq
rlsalwgilesdilslnwgqavgdisplqdqidsngtpveqlgqrawlihralfvyfynp
esrsslvdllledkylnaiqttcphilrylavaiivnkkkqqsnvfqrilnalvrvveqe
ayvyrdpitqfisslfvkfnfedaqaqlilcekvlkndfflntcvdefmenarvcvfety
cnilesididmlcknlridpessekwiveairntrfsakidsannqikmftqhnsyrqvm
dktkalfnrgiemvvginesrsqqnrkggdnrknqrgqnrnqqnqqnqqsnesnettttt
ttaaaatttttttatptsa*illlkf**htlihppsseiiksrrtlrthirthirthhfh
iysfihlili*ieityidi*yqmilfvdrflykkrkkvkkknkkikkkk*ktkniik

Frame A:
tvgllvlsy*yshtiyskifsqtikwnti*pnkyvhs*mhi*cfh*LTISKILNNIKRMK
LIKQWQIFYHKLVVVIMQSMLMNQLVEIQHHSKPKKQELVGELNKLKEQCSFVTQYIESK
KQQKEQQKELKEQQKEQQKEKDTDKTTPTTTDETTTTTTTAPTTTTTTTTTTITPITVIP
FSQLLEKITPEILDSIYRFSKLLFEIGQYGSAREHL---

---siitnpsk*rqrlsalwgilesdilslnwgqavgdisplqdqidsngtpveqlgqra
wlihralfvyfynpesrsslvdllledkylnaiqttcphilrylavaiivnkkkqqsnvf
qrilnalvrvveqeayvyrdpitqfisslfvkfnfedaqaqlilcekvlnqlspthqnkd
rdyqhygvssnqissh*igvkqlvtfhhykiksipmvhqlnnwvkehg*fivhslstftt
qnhvhhwliyswrini*mpfkplvhtffvisplpslsikrnnnqmfsnvf*mhsyvssnk
kltsiviqslnsslvslsnstlkmlklnsfsvkkf*kmisssipvsmnswkmlvfvslkl
ivif*nqlilicyaki*eliqnhqrngslkqleildslqrliqqiiklkcllniipivkl
wirqkhylivvskws*vsmnlevnkiekvvitvrinvvkieinkinktnnlmnqmkqqqq
qqlqqqqqqqllqlqlqlplkfyy*nfnnthssihhhlk**nhaahsaptsaptsapitf
tfihsfi*y*yr*r*ri*iynik*yyllidfyikkekklkkkikk*kkknkklki*lk

Frame B:
llaywfyridipilfiqkylakp*ngirfnqtnmfilrctydasin*lsqrystisre*n
**sngryfitnwll*lcnqcl*inw*rysttpsqknknwlenlin*rnnvhl*lnilnqr
nnkknnkkn*knnkknnkkkkiqiklhqllqmkqlppplqhqpppllqqqqllhqlqlfh
fhny*rklhqkf*ivyidfqnyylrldnmdqqeni---

---qlspthqnkdrdyqhygvssnqissh*igvkqlvtfhhykiksipmvhqlnnwvkeh
g*fivhslstfttqnhvhhwliyswrini*mpfkplvhtffvisplpslsikrnnnqmfs
nvf*mhsyvssnkkltsiviqslnsslvslsnstlkmlklnsfsvkkf*iNYHQPIKIKT
EIISIMGYPRIRYPLIELGSSSW*hftitrsnrfqwyts*tigsksmvnssctlclllqp
ritfiig*ftlgg*ifkchsnhlsthsslsrrchhcq*kettikcfptyfkctrtcrrtr
slrls*snhsihl*slcqiql*rcsssthsl*ksfek*flpqylcr*ihgkcsclcl*nl
l*yfrin*y*yvmqkfkn*sriiremdr*sn*ky*ilckd*fsk*sn*nvyst*flsssy
g*dksii*swyrngrryq*i*kstk*krw**p*estwsk*kstkstkpti**ik*nnnnn
nncsssnnnnyyncnsnfrlnfiikiliththpstii*nnkitphtphphphphphpsls
hlfihsfninidrdnvyryiisndtic*sifi*kkkks*kkk*knkkkkikn*kyn*

Frame C:
cwptgfivlifpyylfkni*pnhkmeydltkqicsfldahmmlplinylkdtqqyqenei
nkamadilsqtgccdyainayesigrdtaplqakktrigwrt**ikgtmficnsiy*ike
ttkrttkrikrttkrttkrkryr*nytnyyr*nnyhhhystnhhhyynnnnyytnysysi
ftiirenytrnfr*yi*ifkiii*dwtiwiskrtf---

---NYHQPIKIKTEIISIMGYPRIRYPLIELGSSSW*hftitrsnrfqwyts*tigsksm
vnssctlclllqpritfiig*ftlgg*ifkchsnhlsthsslsrrchhcq*kettikcfp
tyfkctrtcrrtrslrls*snhsihl*slcqiql*rcsssthsl*ksfesiitnpsk*rq
rlsalwgilesdilslnwgqavgdisplqdqidsngtpveqlgqrawlihralfvyfynp
esrsslvdllledkylnaiqttcphilrylavaiivnkkkqqsnvfqrilnalvrvveqe
ayvyrdpitqfisslfvkfnfedaqaqlilcekvlkndfflntcvdefmenarvcvfety
cnilesididmlcknlridpessekwiveairntrfsakidsannqikmftqhnsyrqvm
dktkalfnrgiemvvginesrsqqnrkggdnrknqrgqnrnqqnqqnqqsnesnettttt
ttaaaatttttttatptsa*illlkf**htlihppsseiiksrrtlrthirthirthhfh
iysfihlili*ieityidi*yqmilfvdrflykkrkkvkkknkkikkkk*ktkniik

Query= Contig-U15608-1 (Contig-U15608-1Q)
/CSM_Contig/Contig-U15608-1Q.Seq.d
         (2443 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15608-1 (Contig-U15608-1Q) /CSM_Contig/Conti...  2932  0.0
Contig-U15449-1 (Contig-U15449-1Q) /CSM_Contig/Conti...   765  0.0
Contig-U00908-1 (Contig-U00908-1Q) /CSM_Contig/Conti...   105  3e-22
Contig-U15522-1 (Contig-U15522-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U13546-1 (Contig-U13546-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U12804-1 (Contig-U12804-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U10609-1 (Contig-U10609-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U09637-1 (Contig-U09637-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U03527-1 (Contig-U03527-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U15849-1 (Contig-U15849-1Q) /CSM_Contig/Conti...    40  0.016

>Contig-U15608-1 (Contig-U15608-1Q) /CSM_Contig/Contig-U15608-1Q.Seq.d
          Length = 2443

 Score = 2932 bits (1479), Expect = 0.0
 Identities = 1509/1509 (100%)
 Strand = Plus / Plus

                                                                        
Query: 512  caactattacaccaattacagttattccattttcacaattattagagaaaattacaccag 571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512  caactattacaccaattacagttattccattttcacaattattagagaaaattacaccag 571

                                                                        
Query: 572  aaattttagatagtatatatagattttcaaaattattatttgagattggacaatatggat 631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572  aaattttagatagtatatatagattttcaaaattattatttgagattggacaatatggat 631

                                                                        
Query: 632  cagcaagagaacatttannnnnnnnnntcaattatcaccaacccatcaaaataaagacag 691
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632  cagcaagagaacatttannnnnnnnnntcaattatcaccaacccatcaaaataaagacag 691

                                                                        
Query: 692  agattatcagcattatggggtatcctcgaatcagatatcctctcattgaattggggtcaa 751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692  agattatcagcattatggggtatcctcgaatcagatatcctctcattgaattggggtcaa 751

                                                                        
Query: 752  gcagttggtgacatttcaccattacaagatcaaatcgattccaatggtacaccagttgaa 811
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752  gcagttggtgacatttcaccattacaagatcaaatcgattccaatggtacaccagttgaa 811

                                                                        
Query: 812  caattgggtcaaagagcatggttaattcatcgtgcactctttgtctacttttacaaccca 871
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812  caattgggtcaaagagcatggttaattcatcgtgcactctttgtctacttttacaaccca 871

                                                                        
Query: 872  gaatcacgttcatcattggttgatttactcttggaggataaatatttaaatgccattcaa 931
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872  gaatcacgttcatcattggttgatttactcttggaggataaatatttaaatgccattcaa 931

                                                                        
Query: 932  accacttgtccacacattcttcgttatctcgccgttgccatcattgtcaataaaaagaaa 991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932  accacttgtccacacattcttcgttatctcgccgttgccatcattgtcaataaaaagaaa 991

                                                                        
Query: 992  caacaatcaaatgttttccaacgtattttaaatgcactcgtacgtgtcgtcgaacaagaa 1051
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992  caacaatcaaatgttttccaacgtattttaaatgcactcgtacgtgtcgtcgaacaagaa 1051

                                                                        
Query: 1052 gcttacgtctatcgtgatccaatcactcaattcatctctagtctctttgtcaaattcaac 1111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 gcttacgtctatcgtgatccaatcactcaattcatctctagtctctttgtcaaattcaac 1111

                                                                        
Query: 1112 tttgaagatgctcaagctcaactcattctctgtgaaaaagttttgaatcaattatcacca 1171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 tttgaagatgctcaagctcaactcattctctgtgaaaaagttttgaatcaattatcacca 1171

                                                                        
Query: 1172 acccatcaaaataaagacagagattatcagcattatggggtatcctcgaatcagatatcc 1231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 acccatcaaaataaagacagagattatcagcattatggggtatcctcgaatcagatatcc 1231

                                                                        
Query: 1232 tctcattgaattggggtcaagcagttggtgacatttcaccattacaagatcaaatcgatt 1291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 tctcattgaattggggtcaagcagttggtgacatttcaccattacaagatcaaatcgatt 1291

                                                                        
Query: 1292 ccaatggtacaccagttgaacaattgggtcaaagagcatggttaattcatcgtgcactct 1351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 ccaatggtacaccagttgaacaattgggtcaaagagcatggttaattcatcgtgcactct 1351

                                                                        
Query: 1352 ttgtctacttttacaacccagaatcacgttcatcattggttgatttactcttggaggata 1411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 ttgtctacttttacaacccagaatcacgttcatcattggttgatttactcttggaggata 1411

                                                                        
Query: 1412 aatatttaaatgccattcaaaccacttgtccacacattcttcgttatctcgccgttgcca 1471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 aatatttaaatgccattcaaaccacttgtccacacattcttcgttatctcgccgttgcca 1471

                                                                        
Query: 1472 tcattgtcaataaaaagaaacaacaatcaaatgttttccaacgtattttaaatgcactcg 1531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1472 tcattgtcaataaaaagaaacaacaatcaaatgttttccaacgtattttaaatgcactcg 1531

                                                                        
Query: 1532 tacgtgtcgtcgaacaagaagcttacgtctatcgtgatccaatcactcaattcatctcta 1591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 tacgtgtcgtcgaacaagaagcttacgtctatcgtgatccaatcactcaattcatctcta 1591

                                                                        
Query: 1592 gtctctttgtcaaattcaactttgaagatgctcaagctcaactcattctctgtgaaaaag 1651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 gtctctttgtcaaattcaactttgaagatgctcaagctcaactcattctctgtgaaaaag 1651

                                                                        
Query: 1652 ttttgaaaaatgatttcttcctcaatacctgtgtcgatgaattcatggaaaatgctcgtg 1711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1652 ttttgaaaaatgatttcttcctcaatacctgtgtcgatgaattcatggaaaatgctcgtg 1711

                                                                        
Query: 1712 tttgtgtctttgaaacttattgtaatattttagaatcaattgatattgatatgttatgca 1771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1712 tttgtgtctttgaaacttattgtaatattttagaatcaattgatattgatatgttatgca 1771

                                                                        
Query: 1772 aaaatttaagaattgatccagaatcatcagagaaatggatcgttgaagcaattagaaata 1831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1772 aaaatttaagaattgatccagaatcatcagagaaatggatcgttgaagcaattagaaata 1831

                                                                        
Query: 1832 ctagattctctgcaaagattgattcagcaaataatcaaattaaaatgtttactcaacata 1891
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1832 ctagattctctgcaaagattgattcagcaaataatcaaattaaaatgtttactcaacata 1891

                                                                        
Query: 1892 attcctatcgtcaagttatggataagacaaaagcattatttaatcgtggtatcgaaatgg 1951
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1892 attcctatcgtcaagttatggataagacaaaagcattatttaatcgtggtatcgaaatgg 1951

                                                                        
Query: 1952 tcgtaggtatcaatgaatctagaagtcaacaaaatagaaaaggtggtgataaccgtaaga 2011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1952 tcgtaggtatcaatgaatctagaagtcaacaaaatagaaaaggtggtgataaccgtaaga 2011

                     
Query: 2012 atcaacgtg 2020
            |||||||||
Sbjct: 2012 atcaacgtg 2020


 Score =  662 bits (334), Expect = 0.0
 Identities = 348/355 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgttggcctactggttttatcgtattgatattcccatactatttattcaaaaatattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actgttggcctactggttttatcgtattgatattcccatactatttattcaaaaatattt 60

                                                                       
Query: 61  agccaaaccataaaatggaatacgatttaaccaaacaaatatgttcattcttagatgcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agccaaaccataaaatggaatacgatttaaccaaacaaatatgttcattcttagatgcac 120

                                                                       
Query: 121 atatgatgcttccattaattaactatctcaaagatactcaacaatatcaagagaatgaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatgatgcttccattaattaactatctcaaagatactcaacaatatcaagagaatgaaa 180

                                                                       
Query: 181 ttaataaagcaatggcagatattttatcacaaactggttgttgtgattatgcaatcaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaataaagcaatggcagatattttatcacaaactggttgttgtgattatgcaatcaatg 240

                                                                       
Query: 241 cttatgaatcaattggtagagatacagcaccactccaagccnnnnnnncaagaattggtt 300
           |||||||||||||||||||||||||||||||||||||||||       ||||||||||||
Sbjct: 241 cttatgaatcaattggtagagatacagcaccactccaagccaaaaaaacaagaattggtt 300

                                                                  
Query: 301 ggagaacttaataaattaaaggaacaatgttcatttgtaactcaatatattgaat 355
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagaacttaataaattaaaggaacaatgttcatttgtaactcaatatattgaat 355


 Score =  293 bits (148), Expect = 7e-79
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2142 ttccgcttaaattttattattaaaattttaataacacacactcatccatccaccatcatc 2201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 ttccgcttaaattttattattaaaattttaataacacacactcatccatccaccatcatc 2201

                                                                        
Query: 2202 tgaaataataaaatcacgccgcacactccgcacccacatccgcacccacatccgcaccca 2261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2202 tgaaataataaaatcacgccgcacactccgcacccacatccgcacccacatccgcaccca 2261

                                        
Query: 2262 tcactttcacatttattcattcattcat 2289
            ||||||||||||||||||||||||||||
Sbjct: 2262 tcactttcacatttattcattcattcat 2289


 Score = 65.9 bits (33), Expect = 3e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 2335 caaatgatactatttgttgatcgatttttatat 2367
            |||||||||||||||||||||||||||||||||
Sbjct: 2335 caaatgatactatttgttgatcgatttttatat 2367


 Score = 44.1 bits (22), Expect = 0.001
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 437 ctacaccaactactacagatga 458
           ||||||||||||||||||||||
Sbjct: 437 ctacaccaactactacagatga 458


 Score = 36.2 bits (18), Expect = 0.25
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 2158 ttattaaaattttaataa 2175
            ||||||||||||||||||
Sbjct: 2175 ttattaaaattttaataa 2158


>Contig-U15449-1 (Contig-U15449-1Q) /CSM_Contig/Contig-U15449-1Q.Seq.d
          Length = 1401

 Score =  765 bits (386), Expect = 0.0
 Identities = 393/394 (99%), Gaps = 1/394 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1159 tcaattatcaccaacccatcaaaataaagaca-gagattatcagcattatggggtatcct 1217
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 640  tcaattatcaccaacccatcaaaataaagacaagagattatcagcattatggggtatcct 699

                                                                        
Query: 1218 cgaatcagatatcctctcattgaattggggtcaagcagttggtgacatttcaccattaca 1277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700  cgaatcagatatcctctcattgaattggggtcaagcagttggtgacatttcaccattaca 759

                                                                        
Query: 1278 agatcaaatcgattccaatggtacaccagttgaacaattgggtcaaagagcatggttaat 1337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760  agatcaaatcgattccaatggtacaccagttgaacaattgggtcaaagagcatggttaat 819

                                                                        
Query: 1338 tcatcgtgcactctttgtctacttttacaacccagaatcacgttcatcattggttgattt 1397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820  tcatcgtgcactctttgtctacttttacaacccagaatcacgttcatcattggttgattt 879

                                                                        
Query: 1398 actcttggaggataaatatttaaatgccattcaaaccacttgtccacacattcttcgtta 1457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880  actcttggaggataaatatttaaatgccattcaaaccacttgtccacacattcttcgtta 939

                                                                        
Query: 1458 tctcgccgttgccatcattgtcaataaaaagaaacaacaatcaaatgttttccaacgtat 1517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940  tctcgccgttgccatcattgtcaataaaaagaaacaacaatcaaatgttttccaacgtat 999

                                              
Query: 1518 tttaaatgcactcgtacgtgtcgtcgaacaagaa 1551
            ||||||||||||||||||||||||||||||||||
Sbjct: 1000 tttaaatgcactcgtacgtgtcgtcgaacaagaa 1033


 Score =  765 bits (386), Expect = 0.0
 Identities = 393/394 (99%), Gaps = 1/394 (0%)
 Strand = Plus / Plus

                                                                        
Query: 659  tcaattatcaccaacccatcaaaataaagaca-gagattatcagcattatggggtatcct 717
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 640  tcaattatcaccaacccatcaaaataaagacaagagattatcagcattatggggtatcct 699

                                                                        
Query: 718  cgaatcagatatcctctcattgaattggggtcaagcagttggtgacatttcaccattaca 777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700  cgaatcagatatcctctcattgaattggggtcaagcagttggtgacatttcaccattaca 759

                                                                        
Query: 778  agatcaaatcgattccaatggtacaccagttgaacaattgggtcaaagagcatggttaat 837
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760  agatcaaatcgattccaatggtacaccagttgaacaattgggtcaaagagcatggttaat 819

                                                                        
Query: 838  tcatcgtgcactctttgtctacttttacaacccagaatcacgttcatcattggttgattt 897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820  tcatcgtgcactctttgtctacttttacaacccagaatcacgttcatcattggttgattt 879

                                                                        
Query: 898  actcttggaggataaatatttaaatgccattcaaaccacttgtccacacattcttcgtta 957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880  actcttggaggataaatatttaaatgccattcaaaccacttgtccacacattcttcgtta 939

                                                                        
Query: 958  tctcgccgttgccatcattgtcaataaaaagaaacaacaatcaaatgttttccaacgtat 1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940  tctcgccgttgccatcattgtcaataaaaagaaacaacaatcaaatgttttccaacgtat 999

                                              
Query: 1018 tttaaatgcactcgtacgtgtcgtcgaacaagaa 1051
            ||||||||||||||||||||||||||||||||||
Sbjct: 1000 tttaaatgcactcgtacgtgtcgtcgaacaagaa 1033


 Score =  622 bits (314), Expect = e-178
 Identities = 328/335 (97%)
 Strand = Plus / Plus

                                                                       
Query: 21  atcgtattgatattcccatactatttattcaaaaatatttagccaaaccataaaatggaa 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atcgtattgatattcccatactatttattcaaaaatatttagccaaaccataaaatggaa 60

                                                                       
Query: 81  tacgatttaaccaaacaaatatgttcattcttagatgcacatatgatgcttccattaatt 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacgatttaaccaaacaaatatgttcattcttagatgcacatatgatgcttccattaatt 120

                                                                       
Query: 141 aactatctcaaagatactcaacaatatcaagagaatgaaattaataaagcaatggcagat 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactatctcaaagatactcaacaatatcaagagaatgaaattaataaagcaatggcagat 180

                                                                       
Query: 201 attttatcacaaactggttgttgtgattatgcaatcaatgcttatgaatcaattggtaga 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attttatcacaaactggttgttgtgattatgcaatcaatgcttatgaatcaattggtaga 240

                                                                       
Query: 261 gatacagcaccactccaagccnnnnnnncaagaattggttggagaacttaataaattaaa 320
           |||||||||||||||||||||       ||||||||||||||||||||||||||||||||
Sbjct: 241 gatacagcaccactccaagccaaaaaaacaagaattggttggagaacttaataaattaaa 300

                                              
Query: 321 ggaacaatgttcatttgtaactcaatatattgaat 355
           |||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaacaatgttcatttgtaactcaatatattgaat 335


 Score =  293 bits (148), Expect = 7e-79
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2142 ttccgcttaaattttattattaaaattttaataacacacactcatccatccaccatcatc 2201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 ttccgcttaaattttattattaaaattttaataacacacactcatccatccaccatcatc 1222

                                                                        
Query: 2202 tgaaataataaaatcacgccgcacactccgcacccacatccgcacccacatccgcaccca 2261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 tgaaataataaaatcacgccgcacactccgcacccacatccgcacccacatccgcaccca 1282

                                        
Query: 2262 tcactttcacatttattcattcattcat 2289
            ||||||||||||||||||||||||||||
Sbjct: 1283 tcactttcacatttattcattcattcat 1310


 Score =  272 bits (137), Expect = 2e-72
 Identities = 137/137 (100%)
 Strand = Plus / Plus

                                                                       
Query: 512 caactattacaccaattacagttattccattttcacaattattagagaaaattacaccag 571
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 caactattacaccaattacagttattccattttcacaattattagagaaaattacaccag 551

                                                                       
Query: 572 aaattttagatagtatatatagattttcaaaattattatttgagattggacaatatggat 631
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaattttagatagtatatatagattttcaaaattattatttgagattggacaatatggat 611

                            
Query: 632 cagcaagagaacattta 648
           |||||||||||||||||
Sbjct: 612 cagcaagagaacattta 628


 Score = 50.1 bits (25), Expect = 2e-05
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                             
Query: 2335 caaatgatactatttgttgatcgatttttatat 2367
            |||||||||||||||| ||||||||||||||||
Sbjct: 1355 caaatgatactatttg-tgatcgatttttatat 1386


 Score = 44.1 bits (22), Expect = 0.001
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 437 ctacaccaactactacagatga 458
           ||||||||||||||||||||||
Sbjct: 417 ctacaccaactactacagatga 438


 Score = 36.2 bits (18), Expect = 0.25
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 2158 ttattaaaattttaataa 2175
            ||||||||||||||||||
Sbjct: 1196 ttattaaaattttaataa 1179


>Contig-U00908-1 (Contig-U00908-1Q) /CSM_Contig/Contig-U00908-1Q.Seq.d
          Length = 166

 Score =  105 bits (53), Expect = 3e-22
 Identities = 116/146 (79%)
 Strand = Plus / Plus

                                                                        
Query: 2142 ttccgcttaaattttattattaaaattttaataacacacactcatccatccaccatcatc 2201
            ||||| || ||||||||| || ||||||| ||||||| | ||||||| ||| || |||| 
Sbjct: 10   ttccgnttnaattttattnttnaaattttnataacacncnctcatccntcccccntcatt 69

                                                                        
Query: 2202 tgaaataataaaatcacgccgcacactccgcacccacatccgcacccacatccgcaccca 2261
            |||||||| ||||||||||||  | | ||| |||| ||||||  ||| || |||| ||| 
Sbjct: 70   tgaaataanaaaatcacgccgnncncnccgnacccncatccgnncccncanccgcncccn 129

                                      
Query: 2262 tcactttcacatttattcattcattc 2287
             | ||||| | ||||||| ||| |||
Sbjct: 130  nccctttcncntttattcnttcnttc 155


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 42,878
Number of Sequences: 8402
Number of extensions: 42878
Number of successful extensions: 5217
Number of sequences better than 10.0: 679
length of query: 2443
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2426
effective length of database: 7,932,708
effective search space: 19244749608
effective search space used: 19244749608
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

Query= Contig-U15608-1 (Contig-U15608-1Q) /CSM_Contig/Contig-U15608-1Q.Seq.d
         (2443 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ343961) Dictyostelium discoideum cDNA clone:dda17a24, 3' ...   922   0.0    2
(BJ431273) Dictyostelium discoideum cDNA clone:ddv13e17, 3' ...   678   0.0    3
(BJ435393) Dictyostelium discoideum cDNA clone:ddv27b01, 3' ...   636   0.0    4
(BJ437438) Dictyostelium discoideum cDNA clone:ddv34c09, 3' ...   678   0.0    3
(BJ326717) Dictyostelium discoideum cDNA clone:dda17a24, 5' ...   505   0.0    3
(BJ418861) Dictyostelium discoideum cDNA clone:ddv34c09, 5' ...   521   0.0    3
(BJ425539) Dictyostelium discoideum cDNA clone:ddv56f04, 5' ...   521   0.0    3
(BJ363521) Dictyostelium discoideum cDNA clone:ddc27j01, 5' ...   511   0.0    3
(BJ390190) Dictyostelium discoideum cDNA clone:dds21p10, 5' ...   428   0.0    4
(BJ410742) Dictyostelium discoideum cDNA clone:ddv1n13, 5' e...   428   0.0    5
(BJ428911) Dictyostelium discoideum cDNA clone:ddv1n13, 3' e...   410   0.0    4
(BJ412808) Dictyostelium discoideum cDNA clone:ddv9n24, 5' e...   434   0.0    3
(BJ412950) Dictyostelium discoideum cDNA clone:ddv13e17, 5' ...   511   0.0    3
(BJ361080) Dictyostelium discoideum cDNA clone:ddc9a19, 5' e...   521   0.0    3
(BJ387869) Dictyostelium discoideum cDNA clone:dds5d18, 5' e...   545   0.0    2
(AU261918) Dictyostelium discoideum vegetative cDNA clone:VS...   327   e-176  3
(BJ413250) Dictyostelium discoideum cDNA clone:ddv14g22, 5' ...   517   e-175  2
(AU263331) Dictyostelium discoideum vegetative cDNA clone:VS...   293   e-158  3
(BJ374668) Dictyostelium discoideum cDNA clone:ddc9a19, 3' e...   305   e-158  2
(BJ431611) Dictyostelium discoideum cDNA clone:ddv14g22, 3' ...   341   e-147  2
(BJ431121) Dictyostelium discoideum cDNA clone:ddv9n24, 3' e...   260   e-123  2
(BJ399342) Dictyostelium discoideum cDNA clone:dds5d18, 3' e...    98   2e-15  1
(DY276699) IC0AAA41DE05RM1 CitNFL Citrus clementina cDNA 5',...    44   8e-05  3
(FF334861) 280458121 Pea aphid whole body normalized full le...    58   3e-04  2
(FF601555) Le_emcl1_10E08_M13Reverse Little Skate (Leucoraja...    60   4e-04  1
(CN763652) ID0AAA7CG01RM1 ApMS Acyrthosiphon pisum cDNA clon...    58   0.001  2
(CN585000) USDA-FP_128069 Acyrthosiphon pisum, Pea Aphid Acy...    58   0.001  2
(CQ587331) Sequence 15089 from Patent WO0171042.                   58   0.002  1
(CQ587330) Sequence 15088 from Patent WO0171042.                   58   0.002  1
(AY119230) Drosophila melanogaster SD17695 full insert cDNA.       58   0.002  1
(AE014297) Drosophila melanogaster chromosome 3R, complete s...    58   0.002  1
(AC008205) Drosophila melanogaster, chromosome 3R, region 96...    58   0.002  1
(AC019823) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    58   0.002  1
(CF588343) USDA-FP_120700-016 Acyrthosiphon pisum, Pea Aphid...    58   0.002  1
(BI626736) RH67775.5prime RH Drosophila melanogaster normali...    58   0.002  1
(BI607928) RH12029.5prime RH Drosophila melanogaster normali...    58   0.002  1
(BI592032) RH09633.5prime RH Drosophila melanogaster normali...    58   0.002  1
(FF333739) 280454295 Pea aphid whole body normalized full le...    58   0.002  1
(EX630169) 255462857 Pea aphid whole body normalized full le...    58   0.002  1
(EX622528) 255420543 Pea aphid whole body normalized full le...    58   0.002  1
(EX620738) 255413833 Pea aphid whole body normalized full le...    58   0.002  1
(ES219039) MpGnorm_ag2_C22 Myzus persicae, tobacco lineage, ...    56   0.003  2
(DW010468) w10m16_M13F Myzus persicae, tobacco lineage, whol...    56   0.004  2
(EE263043) F06_F06fvplus1g12_pDNRf_521816 Myzus persicae, li...    56   0.005  2
(EE261519) C12_C12ff5b23_pDNRf_514850 Myzus persicae, line F...    56   0.005  2
(FF313534) 279388344 Pea aphid whole body normalized full le...    56   0.006  1
(DR911259) USDA-FP_19387 Citrus sinensis phloem Citrus sinen...    44   0.007  2
(CV718741) UCRCS08_0010O23_r Parent Washington Navel Orange ...    44   0.016  2
(CV709442) UCRPT01_0012O02_r Poncirus trifoliata CTV-challen...    44   0.017  2
(CD576157) UCRPT01_03ce10_g3 Poncirus trifoliata CTV-challen...    44   0.017  2
(CX046905) UCRCS09_10H10_g Ruby Orange Developing Seed cDNA ...    44   0.017  2
(CN186276) UCRCS05_0002K09_r Washington Navel Orange Stored ...    44   0.017  2
(CB291725) UCRCS01_03be05_g1 Washington Navel orange cold ac...    44   0.017  2
(CB293432) UCRCS01_06ad07_g1 Washington Navel orange cold ac...    44   0.017  2
(CX048951) UCRCS09_24F06_g Ruby Orange Developing Seed cDNA ...    44   0.018  2
(EY656002) CS00-C1-100-114-G04-CT.F Sweet orange leaf, green...    44   0.018  2
(CX674033) UCRCS10_3F12_b Madame Vinous Sweet Orange Multipl...    44   0.019  2
(DY269966) IC0AAA28BF10RM1 CitNFL Citrus clementina cDNA 5',...    44   0.020  2
(DY272111) IC0AAA30BA11RM1 CitNFL Citrus clementina cDNA 5',...    44   0.021  2
(DY287256) IC0AAA67BD04RM1 CitNFL Citrus clementina cDNA 5',...    44   0.021  2
(DY274852) IC0AAA37DC04RM1 CitNFL Citrus clementina cDNA 5',...    44   0.022  2
(DY294421) IC0AAA85BH10RM1 CitNFL Citrus clementina cDNA 5',...    44   0.023  2
(DY293745) IC0AAA83CF03RM1 CitNFL Citrus clementina cDNA 5',...    44   0.026  2
(DY274077) IC0AAA35CH03RM2 CitNFL Citrus clementina cDNA 5',...    44   0.026  2
(DY267805) IC0AAA22BH05RM1 CitNFL Citrus clementina cDNA 5',...    44   0.026  2
(DY264237) IC0AAA14AA06RM1 CitNFL Citrus clementina cDNA 5',...    44   0.027  2
(EX631446) 255523293 Pea aphid whole body normalized full le...    50   0.059  2
(BD106609) Zinc finger protein derivatives and methods there...    40   0.16   2
(AR581560) Sequence 43 from patent US 6790941.                     40   0.16   2
(AR156901) Sequence 43 from patent US 6242568.                     40   0.16   2
(AR117905) Sequence 43 from patent US 6140466.                     40   0.16   2
(BD441398) REGULATION OF GENE EXPRESSION USING SINGLE-CHAIN,...    40   0.17   2
(BD441389) REGULATION OF GENE EXPRESSION USING SINGLE-CHAIN,...    40   0.17   2
(AX429854) Sequence 46 from Patent WO0206463.                      40   0.17   2
(AX429841) Sequence 33 from Patent WO0206463.                      40   0.17   2
(AR798296) Sequence 46 from patent US 7011972.                     40   0.17   2
(AR798287) Sequence 33 from patent US 7011972.                     40   0.17   2
(AC096208) Rattus norvegicus clone CH230-33H13, *** SEQUENCI...    42   0.21   8
(AM555436) Paracentrotus lividus EST, clone MPMGp1172N14195Q...    38   0.24   2
(EY812962) PT11-C1-900-036-B08-CT.F Poncirus trifoliata leaf...    40   0.26   2
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    40   0.27   20
(DY284889) IC0AAA62CE12RM1 CitNFL Citrus clementina cDNA 5',...    40   0.27   2
(CR936285) Zebrafish DNA sequence from clone CH73-35G18 in l...    50   0.40   1
(BX571773) Zebrafish DNA sequence from clone DKEY-174K1 in l...    50   0.40   1
(AL591711) Mouse DNA sequence from clone RP23-19L12 on chrom...    50   0.40   1
(AM920431) Penicillium chrysogenum Wisconsin 54-1255 complet...    50   0.40   1
(AC136496) Drosophila pseudoobscura clone DPSF1-548A12, *** ...    50   0.40   1
(AC190429) Cavia porcellus clone CH234-226C12, WORKING DRAFT...    50   0.40   1
(ET525818) fcg3x.224950a16.f C. graminicola genomic sequence...    50   0.40   1
(CN763965) ID0AAA8CD06RM1 ApMS Acyrthosiphon pisum cDNA clon...    50   0.40   1
(CN763915) ID0AAA8BG11RM1 ApMS Acyrthosiphon pisum cDNA clon...    50   0.40   1
(CN763913) ID0AAA8BG09RM1 ApMS Acyrthosiphon pisum cDNA clon...    50   0.40   1
(CN763901) ID0AAA8BF09RM1 ApMS Acyrthosiphon pisum cDNA clon...    50   0.40   1
(CN763898) ID0AAA8BF06RM1 ApMS Acyrthosiphon pisum cDNA clon...    50   0.40   1
(CN761382) ID0AAA30AG03RM1 ApMS Acyrthosiphon pisum cDNA clo...    50   0.40   1
(CN761105) ID0AAA2BF09RM1 ApMS Acyrthosiphon pisum cDNA clon...    50   0.40   1
(CN758292) ID0AAA21DD02RM1 ApMS Acyrthosiphon pisum cDNA clo...    50   0.40   1
(CN585152) USDA-FP_128222 Acyrthosiphon pisum, Pea Aphid Acy...    50   0.40   1
(CF587795) USDA-FP_120900-041 Acyrthosiphon pisum, Pea Aphid...    50   0.40   1
(CF587792) USDA-FP_120900-085 Acyrthosiphon pisum, Pea Aphid...    50   0.40   1
(FF338044) 280468329 Pea aphid whole body normalized full le...    50   0.40   1
(FC296367) CAGN8674.fwd CAGN Nematostella vectensis Nemve mi...    50   0.40   1
(EY380708) CAXA3030.rev CAXA Helobdella robusta Subtracted L...    50   0.40   1
(EY369075) CAXA12165.rev CAXA Helobdella robusta Subtracted ...    50   0.40   1
(EY365771) CAXA1038.rev CAXA Helobdella robusta Subtracted L...    50   0.40   1
(ES226275) MpSG_ag6_A04 Myzus persicae, tobacco lineage, aph...    48   0.42   2
(FE930549) NPAD-aaa43f01.b2 N.brasiliensis_NPAD1_EST_L3N Nip...    42   0.48   2
(EW757021) sb_008_07B07_m13reverselong Onychiurus arcticus r...    48   0.50   2
(CR457482) Zebrafish DNA sequence from clone CH211-159P3 in ...    42   0.53   8
(EW758891) sb_009_04I06_m13reverselong Onychiurus arcticus d...    48   0.59   2
(EA766449) Sequence 5 from patent US 7378510.                      40   0.80   2
(EA043153) Sequence 5 from patent US 7151201.                      40   0.80   2
(AX202417) Sequence 5 from Patent WO0152620.                       40   0.80   2
(EA766448) Sequence 4 from patent US 7378510.                      40   0.81   2
(EA043152) Sequence 4 from patent US 7151201.                      40   0.81   2
(AX202416) Sequence 4 from Patent WO0152620.                       40   0.81   2
(AB014075) Clostridium histolyticum Orf9u, hprT, hflX, Orf6u...    44   0.86   2
(AY691414) Vryburgia amaryllidis cytochrome b (cytb) gene, p...    36   0.92   3
(AC172862) Brassica rapa subsp. pekinensis clone KBrB049E19,...    36   1.1    5
(AL935298) Zebrafish DNA sequence from clone CH211-160I12.         46   1.1    5
(AM453526) Vitis vinifera contig VV78X277525.1, whole genome...    48   1.3    2
(EA766486) Sequence 66 from patent US 7378510.                     40   1.4    2
(EA043190) Sequence 66 from patent US 7151201.                     40   1.4    2
(AX202478) Sequence 66 from Patent WO0152620.                      40   1.4    2
(CU633985) Zebrafish DNA sequence from clone CH73-285B23 in ...    48   1.6    1
(CR927553) Zebrafish DNA sequence from clone DKEY-206P8 in l...    48   1.6    1
(BX649335) Zebrafish DNA sequence from clone DKEY-24C2 in li...    48   1.6    1
(AL929291) Zebrafish DNA sequence from clone CH211-189P10 in...    48   1.6    1
(CT009682) Mouse DNA sequence from clone RP23-136H15 on chro...    48   1.6    1
(AC118603) Mus musculus chromosome 16, clone RP24-79L6, comp...    48   1.6    1
(EA199390) Sequence 63705 from patent US 7214786.                  48   1.6    1
(EA146474) Sequence 10789 from patent US 7214786.                  48   1.6    1
(AC130931) Rattus norvegicus clone CH230-85N17, *** SEQUENCI...    48   1.6    1
(AC113779) Rattus norvegicus clone CH230-94G1, WORKING DRAFT...    48   1.6    1
(CT025721) D.miranda DNA sequence *** SEQUENCING IN PROGRESS...    48   1.6    1
(BX005198) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    48   1.6    1
(DX807631) 3010617 VV10 Chlamydomonas reinhardtii genomic cl...    48   1.6    1
(DX796412) 3010544 VV10 Chlamydomonas reinhardtii genomic cl...    48   1.6    1
(CU010522) Equus caballus GSS, BAC clone CH241-82N21, SP6 en...    48   1.6    1
(AM732626) Cucumis melo subsp. melo EST, clone CI_48-C03-M13R.     48   1.6    1
(AM726965) Cucumis melo subsp. agrestis EST, clone A_01-G04-...    48   1.6    1
(AM723201) Cucumis melo subsp. melo EST, clone PSI_37-A12-M13R.    48   1.6    1
(CV777572) FGAS071978 Triticum aestivum FGAS: Library 2 Gate...    48   1.6    1
(CN807509) HDAH04E11.F Leech Haementeria depressa library HD...    48   1.6    1
(CD921790) G750.100A07F010507 G750 Triticum aestivum cDNA cl...    48   1.6    1
(BQ609530) BRY_5462 wheat EST endosperm library Triticum aes...    48   1.6    1
(EW756511) sb_008_05K01_m13reverselong Onychiurus arcticus r...    48   1.6    1
(EA425481) Sequence 1 from patent US 7329728.                      40   1.7    2
(BD307805) LIGAND ACTIVATED TRANSCRIPTIONAL REGULATOR PROTEINS.    40   1.7    2
(AX128340) Sequence 1 from Patent WO0130843.                       40   1.7    2
(EA425482) Sequence 2 from patent US 7329728.                      40   1.7    2
(BD307806) LIGAND ACTIVATED TRANSCRIPTIONAL REGULATOR PROTEINS.    40   1.7    2
(AX128341) Sequence 2 from Patent WO0130843.                       40   1.7    2
(EA425483) Sequence 3 from patent US 7329728.                      40   1.7    2
(BD307807) LIGAND ACTIVATED TRANSCRIPTIONAL REGULATOR PROTEINS.    40   1.7    2
(AX128342) Sequence 3 from Patent WO0130843.                       40   1.7    2
(DQ150035) Pieris napi voucher PNA1 12S ribosomal RNA gene, ...    44   1.8    2
(AC214769) Zea mays chromosome 5 clone CH201-206N20; ZMMBBc0...    38   1.9    3
(CT027703) Zebrafish DNA sequence from clone CH211-268L2 in ...    44   1.9    6
(AC118521) Rattus norvegicus clone CH230-351P20, *** SEQUENC...    38   2.1    6
(AM910994) Plasmodium knowlesi strain H chromosome 12, compl...    36   2.5    2
(AM430277) Vitis vinifera contig VV78X186856.6, whole genome...    42   2.7    4
(BX248387) Zebrafish DNA sequence from clone CH211-231O6 in ...    40   2.7    4
(CJ449408) Macaca fascicularis mRNA, clone: QflA-14924, 5' e...    46   3.1    2
(CJ454964) Macaca fascicularis mRNA, clone: QflA-20728, 5' e...    46   3.2    2
(CU915571) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   3.2    8
(CK933374) CGF1004286_D07 Developing fruit juice sac at 38 D...    36   3.2    2
(ER607986) 1093016289606 Global-Ocean-Sampling_GS-36-01-01-2...    38   3.3    2
(AZ739893) RPCI-24-102P19.TJB RPCI-24 Mus musculus genomic c...    40   3.3    2
(AZ738355) RPCI-24-102K18.TJ RPCI-24 Mus musculus genomic cl...    40   3.4    2
(AM444048) Vitis vinifera contig VV78X247062.1, whole genome...    38   3.5    3
(DY297817) IC0AAA93DD02RM1 CitNFL Citrus clementina cDNA 5',...    36   4.1    2
(FF296088) 279307827 Pea aphid whole body normalized full le...    36   4.1    2
(AY576331) Arachnocampa luminosa biotype 3 16S large subunit...    36   4.2    2
(AY576330) Arachnocampa luminosa biotype 2 16S large subunit...    36   4.2    2
(BJ388733) Dictyostelium discoideum cDNA clone:dds16d05, 5' ...    32   4.5    2
(AC119068) Canis lupus familiaris clone RP81-359E18, WORKING...    46   5.7    5
(BJ414462) Dictyostelium discoideum cDNA clone:ddv19b12, 5' ...    40   5.8    2
(CR352260) Zebrafish DNA sequence from clone CH211-234B14 in...    38   5.9    7
(AX346684) Sequence 1755 from Patent WO0200928.                    40   6.0    2
(CR536613) Zebrafish DNA sequence from clone DKEY-88L16 in l...    46   6.2    1
(CR450739) Zebrafish DNA sequence from clone DKEY-175B17 in ...    46   6.2    1
(BX465186) Zebrafish DNA sequence from clone DKEY-106M10 in ...    46   6.2    1
(AL935288) Zebrafish DNA sequence from clone CH211-250C4.          46   6.2    1
(AC164559) Mus musculus BAC clone RP23-198H17 from chromosom...    46   6.2    1
(AC159822) Mus musculus BAC clone RP23-152C21 from chromosom...    46   6.2    1
(AC141876) Mus musculus BAC clone RP24-289M9 from chromosome...    46   6.2    1
(AC122846) Mus musculus BAC clone RP23-156M18 from 19, compl...    46   6.2    1
(AC098875) Mus musculus BAC clone RP23-1E10 from 19, complet...    46   6.2    1
(AM451502) Vitis vinifera, whole genome shotgun sequence, co...    46   6.2    1
(AM447095) Vitis vinifera contig VV78X249740.3, whole genome...    46   6.2    1
(AF371426) Saccharomyces cerevisiae clone pktel101 telomeric...    46   6.2    1
(AC151955) Populus trichocarpa clone Pop1-041G20, complete s...    46   6.2    1
(AC149480) Populus trichocarpa clone Pop1-048O04, complete s...    46   6.2    1
(AC194582) Canis familiaris chromosome 31, clone XX-8B8, com...    46   6.2    1
(AC188643) Canis familiaris chromosome 31, clone XX-371K20, ...    46   6.2    1
(AM910986) Plasmodium knowlesi strain H chromosome 4, comple...    46   6.2    1
(AP001000) Homo sapiens genomic DNA, chromosome 11 clone:RP1...    46   6.2    1
(AL078603) Human DNA sequence from clone RP3-364H10 on chrom...    46   6.2    1
(AC208189) Homo sapiens FOSMID clone ABC12-46880900K1 from c...    46   6.2    1
(AC010377) Homo sapiens chromosome 5 clone CTD-2060J20, comp...    46   6.2    1
(AC155630) Zea mays strain B73 clone ZMMBBc0477G13, *** SEQU...    46   6.2    1
(AC155442) Zea mays strain B73 clone ZMMBBb0284B14, *** SEQU...    46   6.2    1
(AC132713) Rattus norvegicus clone CH230-218G21, WORKING DRA...    46   6.2    1
(AC114036) Rattus norvegicus clone CH230-62L5, *** SEQUENCIN...    46   6.2    1
(AC112181) Homo sapiens chromosome 5 clone RP11-149M10, WORK...    46   6.2    1
(AC108230) Rattus norvegicus chromosome 18 clone CH230-7M22,...    46   6.2    1
(AC107101) Rattus norvegicus chromosome 18 clone CH230-25I4,...    46   6.2    1
(AC098461) Rattus norvegicus clone CH230-2F17, WORKING DRAFT...    46   6.2    1
(AC095278) Rattus norvegicus clone CH230-10N15, WORKING DRAF...    46   6.2    1
(CU929870) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   6.2    1
(CU928836) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   6.2    1
(CU928805) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   6.2    1
(AC080053) Homo sapiens chromosome 11 clone RP11-816K15 map ...    46   6.2    1
(AC068516) Homo sapiens chromosome 11 clone RP11-816K15 map ...    46   6.2    1
(AC027356) Homo sapiens clone RP11-114O23, LOW-PASS SEQUENCE...    46   6.2    1
(AC026752) Homo sapiens chromosome 5 clone RP11-72I10, WORKI...    46   6.2    1
(CU302441) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   6.2    1
(AC225559) Zea mays chromosome 6 clone CH201-33A16; ZMMBBc00...    46   6.2    1
(AC221789) Bos taurus clone CH240-385E20, WORKING DRAFT SEQU...    46   6.2    1
(AC203385) Zea mays chromosome 6 clone CH201-336M11; ZMMBBc0...    46   6.2    1
(AC194585) Canis lupus familiaris chromosome 31 clone XX-458...    46   6.2    1
(AC191330) Zea mays chromosome 1 clone CH201-477G13; ZMMBBc0...    46   6.2    1
(AC016641) Homo sapiens chromosome 5 clone RP11-462C15, WORK...    46   6.2    1
(AC009644) Homo sapiens chromosome 11 clone RP11-121G24 map ...    46   6.2    1
(AZ692795) ENTMD70TR Entamoeba histolytica Sheared DNA Entam...    46   6.2    1
(AZ096507) RPCI-23-448L14.TV RPCI-23 Mus musculus genomic cl...    46   6.2    1
(AZ015002) RPCI-23-366E21.TV RPCI-23 Mus musculus genomic cl...    46   6.2    1
(ET861278) CHO_OF155xi03r1.ab1 CHO_OF Nicotiana tabacum geno...    46   6.2    1
(ET861204) CHO_OF155xi03f1.ab1 CHO_OF Nicotiana tabacum geno...    46   6.2    1
(DX645706) 2059831 VV02 Ustilago maydis genomic clone 828109...    46   6.2    1
(CL507851) SAIL_789_D01.v1 SAIL Collection Arabidopsis thali...    46   6.2    1
(CG842547) Ynhw3161 HW-YUBAC Bos taurus genomic clone HW-YUB...    46   6.2    1
(CG689675) ZMMBBc0132D21f ZMMBBc (EcoRI) Zea mays subsp. may...    46   6.2    1
(CG267534) OGVDT56TV ZM_0.7_1.5_KB Zea mays genomic clone ZM...    46   6.2    1
(CE541312) tigr-gss-dog-17000366030107 Dog Library Canis lup...    46   6.2    1
(EE628694) CHEL11283.b1_F13.ab1 CHE(LMS) serpentine sunflowe...    46   6.2    1
(DN806516) 76954409 Sea Urchin primary mesenchyme cell cDNA ...    46   6.2    1
(CK617029) ou32b07.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616991) ou31c10.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616939) ou30b07.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616666) ou23g05.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616660) ou23f01.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616647) ou23d02.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616644) ou23c09.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616629) ou22h12.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616611) ou22f07.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616594) ou22d03.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616452) ou19d09.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616443) ou19b07.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616403) ou18b12.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616390) ou18a04.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616385) ou17h05.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616364) ou17d11.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616344) ou16h06.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616219) ou14c02.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616158) ou12h03.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616139) ou12d03.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616127) ou12b05.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK616000) ou09b10.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615969) ou08e10.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615966) ou08e05.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615933) ou07g05.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615889) ou06f04.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615878) ou06c08.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615826) ou05b07.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615794) ou04c10.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615792) ou04c07.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615715) ou02c11.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CK615707) ou02b03.y1 Mouse lacrimal gland, unamplified: ou ...    46   6.2    1
(CJ471471) Macaca fascicularis mRNA, clone: QorA-11143, 5' e...    46   6.2    1
(CJ447415) Macaca fascicularis mRNA, clone: QflA-12745, 5' e...    46   6.2    1
(CJ442347) Macaca fascicularis mRNA, clone: QccE-19857, 5' e...    46   6.2    1
(BP096248) Chlamydomonas reinhardtii cDNA clone:MXL055c10_r,...    46   6.2    1
(BM394686) 50072-2-5-E04.f.1 Chilcoat/Turkewitz cDNA (large ...    46   6.2    1
(BM393093) 50071-2-5-E04.f.1 Chilcoat/Turkewitz cDNA (small ...    46   6.2    1
(BJ386843) Dictyostelium discoideum cDNA clone:dds10n21, 5' ...    46   6.2    1
(FK932262) EST_lsal_evj_956160 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK932261) EST_lsal_evj_936960 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK929041) EST_lsal_evj_941439 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK929040) EST_lsal_evj_945279 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK927023) EST_lsal_evj_951152 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK927022) EST_lsal_evj_946928 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK924554) EST_lsal_evj_947576 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK924553) EST_lsal_evj_938360 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK922626) EST_lsal_evj_953497 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK922625) EST_lsal_evj_937369 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK918666) EST_lsal_evj_949157 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK918665) EST_lsal_evj_941861 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK915911) EST_lsal_evj_956569 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK915910) EST_lsal_evj_932377 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK908439) EST_lsal_evj_939622 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK908438) EST_lsal_evj_932710 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK905933) EST_lsal_evj_960163 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(FK905932) EST_lsal_evj_951331 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(EX484165) EST_lsal_evj_795023 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(EX484164) EST_lsal_evj_794639 lsalevj mixed_tissue_mixed_st...    46   6.2    1
(BX510329) Zebrafish DNA sequence from clone RP71-67M5 in li...    40   6.5    7
(CT998565) Zebrafish DNA sequence from clone DKEY-197A6 in l...    42   6.6    4
(BJ327585) Dictyostelium discoideum cDNA clone:dda21a02, 5' ...    40   6.9    2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    36   7.5    16
(AM464846) Vitis vinifera contig VV78X197039.5, whole genome...    42   7.6    2
(BJ386809) Dictyostelium discoideum cDNA clone:dds10d24, 5' ...    38   8.1    2
(BH056099) RPCI-24-354J18.TV RPCI-24 Mus musculus genomic cl...    34   8.1    3
(AX202582) Sequence 55 from Patent WO0153480.                      40   9.2    2
(AJ779543) Populus euphratica EST, clone P0000800003G12F1.         38   9.3    2
(EY331198) CAWY4012.rev CAWY Helobdella robusta Subtracted E...    40   9.5    2
(AC096711) Homo sapiens BAC clone RP11-1E22 from 4, complete...    38   9.5    7
(CU633475) Zebrafish DNA sequence from clone CH73-61H9 in li...    40   9.9    5

>(BJ343961) Dictyostelium discoideum cDNA clone:dda17a24, 3' end,
            single read.
          Length = 695

 Score =  922 bits (465), Expect(2) = 0.0
 Identities = 465/465 (100%)
 Strand = Plus / Minus


Query: 1546 caagaagcttacgtctatcgtgatccaatcactcaattcatctctagtctctttgtcaaa 1605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695  caagaagcttacgtctatcgtgatccaatcactcaattcatctctagtctctttgtcaaa 636


Query: 1606 ttcaactttgaagatgctcaagctcaactcattctctgtgaaaaagttttgaaaaatgat 1665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635  ttcaactttgaagatgctcaagctcaactcattctctgtgaaaaagttttgaaaaatgat 576


Query: 1666 ttcttcctcaatacctgtgtcgatgaattcatggaaaatgctcgtgtttgtgtctttgaa 1725
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575  ttcttcctcaatacctgtgtcgatgaattcatggaaaatgctcgtgtttgtgtctttgaa 516


Query: 1726 acttattgtaatattttagaatcaattgatattgatatgttatgcaaaaatttaagaatt 1785
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515  acttattgtaatattttagaatcaattgatattgatatgttatgcaaaaatttaagaatt 456


Query: 1786 gatccagaatcatcagagaaatggatcgttgaagcaattagaaatactagattctctgca 1845
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455  gatccagaatcatcagagaaatggatcgttgaagcaattagaaatactagattctctgca 396


Query: 1846 aagattgattcagcaaataatcaaattaaaatgtttactcaacataattcctatcgtcaa 1905
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395  aagattgattcagcaaataatcaaattaaaatgtttactcaacataattcctatcgtcaa 336


Query: 1906 gttatggataagacaaaagcattatttaatcgtggtatcgaaatggtcgtaggtatcaat 1965
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335  gttatggataagacaaaagcattatttaatcgtggtatcgaaatggtcgtaggtatcaat 276


Query: 1966 gaatctagaagtcaacaaaatagaaaaggtggtgataaccgtaag 2010
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275  gaatctagaagtcaacaaaatagaaaaggtggtgataaccgtaag 231

 Score =  107 bits (54), Expect(2) = 0.0
 Identities = 54/54 (100%)
 Strand = Plus / Minus


Query: 2237 acatccgcacccacatccgcacccatcactttcacatttattcattcattcatt 2290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101  acatccgcacccacatccgcacccatcactttcacatttattcattcattcatt 48

 Score =  224 bits (113), Expect(2) = 2e-58
 Identities = 113/113 (100%)
 Strand = Plus / Minus


Query: 1046 caagaagcttacgtctatcgtgatccaatcactcaattcatctctagtctctttgtcaaa 1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695  caagaagcttacgtctatcgtgatccaatcactcaattcatctctagtctctttgtcaaa 636


Query: 1106 ttcaactttgaagatgctcaagctcaactcattctctgtgaaaaagttttgaa 1158
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635  ttcaactttgaagatgctcaagctcaactcattctctgtgaaaaagttttgaa 583

 Score = 44.1 bits (22), Expect(2) = 2e-58
 Identities = 22/22 (100%)
 Strand = Plus / Minus


Query: 2228 tccgcacccacatccgcaccca 2249
            ||||||||||||||||||||||
Sbjct: 98   tccgcacccacatccgcaccca 77

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,538,821,496
Number of extensions: 156677175
Number of successful extensions: 13692701
Number of sequences better than 10.0: 311
Length of query: 2443
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2418
Effective length of database: 96,311,147,814
Effective search space: 232880355414252
Effective search space used: 232880355414252
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

Query= Contig-U15608-1 (Contig-U15608-1Q) /CSM_Contig/Contig-U15608-1Q.Seq.d
         (2443 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54CC5) RecName: Full=Eukaryotic translation initiation factor ...   540   e-153
(Q1LUA8) RecName: Full=Eukaryotic translation initiation factor ...   251   9e-65
(Q3T102) RecName: Full=Eukaryotic translation initiation factor ...   251   1e-64
(P60228) RecName: Full=Eukaryotic translation initiation factor ...   251   1e-64
CR457029_1(CR457029|pid:none) Homo sapiens full open reading fra...   250   2e-64
CR761387_1(CR761387|pid:none) Xenopus tropicalis finished cDNA, ...   250   2e-64
(Q6P7L9) RecName: Full=Eukaryotic translation initiation factor ...   250   2e-64
BT074531_1(BT074531|pid:none) Osmerus mordax clone omor-eva-517-...   250   2e-64
AY893445_1(AY893445|pid:none) Synthetic construct Homo sapiens c...   250   2e-64
BC017887_1(BC017887|pid:none) Homo sapiens eukaryotic translatio...   249   3e-64
BC092025_1(BC092025|pid:none) Xenopus laevis Eukaryotic translat...   249   3e-64
AK313186_1(AK313186|pid:none) Homo sapiens cDNA, FLJ93685, highl...   249   4e-64
CR859743_1(CR859743|pid:none) Pongo abelii mRNA; cDNA DKFZp468O0...   248   7e-64
(Q05AY2) RecName: Full=Eukaryotic translation initiation factor ...   248   1e-63
AY648778_1(AY648778|pid:none) Danio rerio eukaryotic translation...   247   2e-63
AK011436_1(AK011436|pid:none) Mus musculus 10 days embryo whole ...   246   2e-63
BT082880_1(BT082880|pid:none) Anoplopoma fimbria clone afim-evh-...   245   5e-63
BT078763_1(BT078763|pid:none) Lepeophtheirus salmonis Pacific fo...   245   6e-63
AF162775_1(AF162775|pid:none) Xenopus laevis Int-6 protein mRNA,...   244   8e-63
U94174_1(U94174|pid:none) Homo sapiens mammary tumor-associated ...   244   1e-62
AY398340_1(AY398340|pid:none) Danio rerio clone RK139A2H06 eukar...   244   1e-62
(A7RWP6) RecName: Full=Eukaryotic translation initiation factor ...   241   7e-62
BT074075_1(BT074075|pid:none) Oncorhynchus mykiss clone omyk-evo...   241   1e-61
(B4H5N1) RecName: Full=Eukaryotic translation initiation factor ...   234   1e-59
(Q29EX2) RecName: Full=Eukaryotic translation initiation factor ...   234   1e-59
(B3NDH5) RecName: Full=Eukaryotic translation initiation factor ...   231   1e-58
(B4IXG1) RecName: Full=Eukaryotic translation initiation factor ...   231   1e-58
(B4LG58) RecName: Full=Eukaryotic translation initiation factor ...   230   2e-58
EF070481_1(EF070481|pid:none) Maconellicoccus hirsutus clone WHM...   230   2e-58
BX957242_2(BX957242|pid:none) Zebrafish DNA sequence from clone ...   230   2e-58
(B4HK67) RecName: Full=Eukaryotic translation initiation factor ...   229   3e-58
(B4QMY7) RecName: Full=Eukaryotic translation initiation factor ...   229   3e-58
AY122062_1(AY122062|pid:none) Drosophila melanogaster AT01736 fu...   228   6e-58
FN314005_1(FN314005|pid:none) Schistosoma japonicum isolate Anhu...   228   8e-58
FN318014_1(FN318014|pid:none) Schistosoma japonicum isolate Anhu...   228   8e-58
(B0WAM5) RecName: Full=Eukaryotic translation initiation factor ...   228   1e-57
(Q1HQY6) RecName: Full=Eukaryotic translation initiation factor ...   228   1e-57
(Q7QIL8) RecName: Full=Eukaryotic translation initiation factor ...   226   2e-57
(B4MYA1) RecName: Full=Eukaryotic translation initiation factor ...   225   5e-57
(Q2F5R8) RecName: Full=Eukaryotic translation initiation factor ...   225   7e-57
FN357907_5(FN357907|pid:none) Schistosoma mansoni genome sequenc...   224   9e-57
DQ989627_6(DQ989627|pid:none) Oryza sativa (japonica cultivar-gr...   219   4e-55
AP005197_13(AP005197|pid:none) Oryza sativa Japonica Group genom...   218   6e-55
CP001327_487(CP001327|pid:none) Micromonas sp. RCC299 chromosome...   217   2e-54
EF676716_1(EF676716|pid:none) Picea sitchensis clone WS02749_G10...   216   4e-54
EU967718_1(EU967718|pid:none) Zea mays clone 305571 eukaryotic t...   214   9e-54
AP003842_18(AP003842|pid:none) Oryza sativa Japonica Group genom...   214   1e-53
AF285832_1(AF285832|pid:none) Arabidopsis thaliana eukaryotic in...   213   3e-53
(Q0U0X1) RecName: Full=Eukaryotic translation initiation factor ...   212   5e-53
BT035325_1(BT035325|pid:none) Zea mays full-length cDNA clone ZM...   212   5e-53
(Q5B973) RecName: Full=Eukaryotic translation initiation factor ...   211   1e-52
AF255679_1(AF255679|pid:none) Arabidopsis thaliana eIF3e mRNA, c...   210   2e-52
(Q4WY08) RecName: Full=Eukaryotic translation initiation factor ...   207   1e-51
(Q1E170) RecName: Full=Eukaryotic translation initiation factor ...   207   1e-51
(A1CKN7) RecName: Full=Eukaryotic translation initiation factor ...   205   7e-51
(O61820) RecName: Full=Eukaryotic translation initiation factor ...   204   2e-50
(Q0CNR3) RecName: Full=Eukaryotic translation initiation factor ...   202   4e-50
(Q2HBQ2) RecName: Full=Eukaryotic translation initiation factor ...   196   4e-48
(Q7S519) RecName: Full=Eukaryotic translation initiation factor ...   194   2e-47
AL137080_14(AL137080|pid:none) Arabidopsis thaliana DNA chromoso...   177   2e-42
BT051932_1(BT051932|pid:none) Medicago truncatula clone MTYF5_F6...   174   1e-41
(Q4PHN4) RecName: Full=Eukaryotic translation initiation factor ...   171   2e-40
(O94513) RecName: Full=Eukaryotic translation initiation factor ...   160   3e-37
EF215053_1(EF215053|pid:none) Callithrix jacchus clone O05-46.1_...   159   5e-37
AF117648_1(AF117648|pid:none) Schizosaccharomyces pombe Int6 (in...   154   2e-35
AM503707_1(AM503707|pid:none) Linaria alpina partial EIF3E gene ...   134   2e-29
AM503705_1(AM503705|pid:none) Lamium purpureum partial EIF3E gen...   133   3e-29
AM503706_1(AM503706|pid:none) Lathraea squamaria partial EIF3E g...   133   3e-29
AM503711_1(AM503711|pid:none) Melampyrum arvense partial EIF3E g...   129   7e-28
AM889303_1(AM889303|pid:none) Rorippa austriaca partial eif3E ge...   128   9e-28
AM503709_1(AM503709|pid:none) Melampyrum arvense partial EIF3E g...   127   1e-27
CR940348_583(CR940348|pid:none) Theileria annulata strain Ankara...   126   3e-27
AM889300_1(AM889300|pid:none) Calepina irregularis partial eif3E...   126   3e-27
AM889295_1(AM889295|pid:none) Erysimum cheiri partial eif3E gene...   126   3e-27
AM503720_1(AM503720|pid:none) Melampyrum pratense partial EIF3E ...   126   4e-27
AM889302_1(AM889302|pid:none) Malcolmia maritima partial eif3E g...   125   6e-27
AM503715_1(AM503715|pid:none) Melampyrum italicum partial EIF3E ...   124   1e-26
AM889298_1(AM889298|pid:none) Cardamine hirsuta partial eif3E ge...   124   2e-26
AM889296_1(AM889296|pid:none) Cardamine flexuosa partial eif3E g...   123   4e-26
AM889291_1(AM889291|pid:none) Alyssum montanum partial eif3E gen...   122   5e-26
AM889292_1(AM889292|pid:none) Alyssum montanum partial eif3E gen...   122   5e-26
AM889288_1(AM889288|pid:none) Aethionema grandiflorum partial ei...   120   3e-25
AM503717_1(AM503717|pid:none) Melampyrum italicum partial EIF3E ...   119   7e-25
AY810265_1(AY810265|pid:none) Schistosoma japonicum SJCHGC05239 ...   117   2e-24
AM503724_1(AM503724|pid:none) Melampyrum sylvaticum partial EIF3...   116   4e-24
CT005266_239(CT005266|pid:none) Leishmania major strain Friedlin...   114   1e-23
AM503713_1(AM503713|pid:none) Melampyrum cristatum partial EIF3E...   114   2e-23
AM502246_242(AM502246|pid:none) Leishmania infantum chromosome 28.    114   2e-23
AM503719_1(AM503719|pid:none) Melampyrum pratense partial EIF3E ...   114   2e-23
AM503725_1(AM503725|pid:none) Melampyrum sylvaticum partial EIF3...   110   2e-22
AM503723_1(AM503723|pid:none) Melampyrum sp. JW_13_02_07 partial...   110   3e-22
AM494965_251(AM494965|pid:none) Leishmania braziliensis chromoso...   109   4e-22
AM503730_1(AM503730|pid:none) Physalis alkekengi partial EIF3E g...   108   1e-21
AM503698_1(AM503698|pid:none) Aesculus hippocastanum partial EIF...   107   3e-21
AM503714_1(AM503714|pid:none) Melampyrum cristatum partial EIF3E...   105   6e-21
EU966824_1(EU966824|pid:none) Zea mays clone 297609 hypothetical...   105   6e-21
AM503728_1(AM503728|pid:none) Melampyrum velebiticum partial EIF...   103   4e-20
AM503734_1(AM503734|pid:none) Scrophularia canina partial EIF3E ...    96   6e-18
AM503733_1(AM503733|pid:none) Rhinanthus alectorolophus partial ...    91   2e-16
AY811384_1(AY811384|pid:none) Schistosoma japonicum SJCHGC01585 ...    88   1e-15
BT052305_1(BT052305|pid:none) Medicago truncatula clone MTYF9_FA...    54   2e-05
DQ407907_1(DQ407907|pid:none) Ictalurus punctatus clone SCCG01R ...    51   2e-04
S75223_1(S75223|pid:none) int-6, int-6 {LTR U3, MMTVm integratio...    49   0.001
CR940353_360(CR940353|pid:none) Theileria annulata strain Ankara...    44   0.036
AY231747_1(AY231747|pid:none) Drosophila yakuba clone yak-em_Int...    40   0.31
(Q54KZ8) RecName: Full=Eukaryotic translation initiation factor ...    39   0.90
AE017308_288(AE017308|pid:none) Mycoplasma mobile 163K complete ...    37   2.6
AC183409_24(AC183409|pid:none) Asparagus officinalis clone B1-K2...    37   2.6
(A8WQY8) RecName: Full=COP9/Signalosome and eIF3 complex-shared ...    37   3.4
AM461994_1(AM461994|pid:none) Vitis vinifera contig VV78X050513....    36   5.8
AY341999_1(AY341999|pid:none) Drosophila miranda CG9677-like pro...    35   9.9
CP001291_2163(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    35   9.9
BT043761_1(BT043761|pid:none) Salmo salar clone HM6_1089 eukaryo...    35   9.9

>(Q54CC5) RecName: Full=Eukaryotic translation initiation factor 3
            subunit E;          Short=eIF3e; AltName: Full=Eukaryotic
            translation initiation factor 3 subunit 6;
          Length = 525

 Score =  540 bits (1390), Expect(2) = e-153
 Identities = 270/271 (99%), Positives = 271/271 (100%)
 Frame = +1

Query: 1189 QRLSALWGILESDILSLNWGQAVGDISPLQDQIDSNGTPVEQLGQRAWLIHRALFVYFYN 1368
            +RLSALWGILESDILSLNWGQAVGDISPLQDQIDSNGTPVEQLGQRAWLIHRALFVYFYN
Sbjct: 206  KRLSALWGILESDILSLNWGQAVGDISPLQDQIDSNGTPVEQLGQRAWLIHRALFVYFYN 265

Query: 1369 PESRSSLVDLLLEDKYLNAIQTTCPHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQ 1548
            PESRSSLVDLLLEDKYLNAIQTTCPHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQ
Sbjct: 266  PESRSSLVDLLLEDKYLNAIQTTCPHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQ 325

Query: 1549 EAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVLKNDFFLNTCVDEFMENARVCVFET 1728
            EAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVLKNDFFLNTCVDEFMENARVCVFET
Sbjct: 326  EAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVLKNDFFLNTCVDEFMENARVCVFET 385

Query: 1729 YCNILESIDIDMLCKNLRIDPESSEKWIVEAIRNTRFSAKIDSANNQIKMFTQHNSYRQV 1908
            YCNILESIDIDMLCKNLRIDPESSEKWIVEAIRNTRFSAKIDSANNQIKMFTQHNSYRQV
Sbjct: 386  YCNILESIDIDMLCKNLRIDPESSEKWIVEAIRNTRFSAKIDSANNQIKMFTQHNSYRQV 445

Query: 1909 MDKTKALFNRGIEMVVGINESRSQQNRKGGD 2001
            MDKTKALFNRGIEMVVGINESRSQQNRKGGD
Sbjct: 446  MDKTKALFNRGIEMVVGINESRSQQNRKGGD 476

 Score = 29.3 bits (64), Expect(2) = e-153
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 1067 DPITQFISSLFVKFNFEDAQAQLILCEKVLNQLSPTHQNKDR 1192
            D I +F   LF    +  A+  L    ++  QLSPTHQNKD+
Sbjct: 169  DSIYRFSKLLFEIGQYGSAREHL----EIFLQLSPTHQNKDK 206

 Score =  308 bits (788), Expect(4) = e-146
 Identities = 155/156 (99%), Positives = 156/156 (100%)
 Frame = +2

Query: 689  QRLSALWGILESDILSLNWGQAVGDISPLQDQIDSNGTPVEQLGQRAWLIHRALFVYFYN 868
            +RLSALWGILESDILSLNWGQAVGDISPLQDQIDSNGTPVEQLGQRAWLIHRALFVYFYN
Sbjct: 206  KRLSALWGILESDILSLNWGQAVGDISPLQDQIDSNGTPVEQLGQRAWLIHRALFVYFYN 265

Query: 869  PESRSSLVDLLLEDKYLNAIQTTCPHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQ 1048
            PESRSSLVDLLLEDKYLNAIQTTCPHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQ
Sbjct: 266  PESRSSLVDLLLEDKYLNAIQTTCPHILRYLAVAIIVNKKKQQSNVFQRILNALVRVVEQ 325

Query: 1049 EAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVL 1156
            EAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVL
Sbjct: 326  EAYVYRDPITQFISSLFVKFNFEDAQAQLILCEKVL 361

 Score =  149 bits (375), Expect(4) = e-146
 Identities = 71/74 (95%), Positives = 72/74 (97%)
 Frame = +3

Query: 75  MEYDLTKQICSFLDAHMMLPLINYLKDTQQYQENEINKAMADILSQTGCCDYAINAYESI 254
           MEYDLTKQICSFLDAHMMLPLINYLKDTQQYQENEINKAMADILSQTGCCDYAINAYESI
Sbjct: 1   MEYDLTKQICSFLDAHMMLPLINYLKDTQQYQENEINKAMADILSQTGCCDYAINAYESI 60

Query: 255 GRDTAPLQAKKTRI 296
           GRDTAPLQAKK  +
Sbjct: 61  GRDTAPLQAKKQEL 74

 Score =  105 bits (263), Expect(4) = e-146
 Identities = 64/122 (52%), Positives = 64/122 (52%)
 Frame = +1

Query: 283 KKQELVGELNKLKEQCSFVTQYIESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 462
           KKQELVGELNKLKEQCSFVTQYIES
Sbjct: 70  KKQELVGELNKLKEQCSFVTQYIESKKQQKEQQKELKEQQKEQQKEKDTDKTTPTTTDET 129

Query: 463 XXXXXXXXXXXXXXXXXXXXXXXVIPFSQLLEKITPEILDSIYRFSKLLFEIGQYGSARE 642
                                  VIPFSQLLEKITPEILDSIYRFSKLLFEIGQYGSARE
Sbjct: 130 TTTTTTAPTTTTTTTTTTITPITVIPFSQLLEKITPEILDSIYRFSKLLFEIGQYGSARE 189

Query: 643 HL 648
           HL
Sbjct: 190 HL 191

 Score = 26.6 bits (57), Expect(4) = e-146
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 660 QLSPTHQNKDR 692
           QLSPTHQNKD+
Sbjct: 196 QLSPTHQNKDK 206

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,247,018,928
Number of extensions: 61037202
Number of successful extensions: 170978
Number of sequences better than 10.0: 113
Number of HSP's gapped: 170437
Number of HSP's successfully gapped: 312
Length of query: 814
Length of database: 1,051,180,864
Length adjustment: 137
Effective length of query: 677
Effective length of database: 607,772,281
Effective search space: 411461834237
Effective search space used: 411461834237
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.52  gvh: 0.35  alm: 0.34  top: 0.53  tms: 0.00  mit: 0.37  mip: 0.03
 nuc: 0.03  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U15608-1 is nuc