Contig-U15594-1
Contig ID Contig-U15594-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15594-1 (Contig-U15594-1Q) /CSM_Contig/Contig-U15594-1Q.Seq.d
CACTGTTGGCCTACTGGAAACATAACCCAAAAATAAATATATAATAAAAT
GACAACTCAAATCTATCAGGTTCCAGTTGTCAGTAATGGTCTTAGAGAAA
CTGAATCTATTCTTCAAATTGTAGATTCACTTGAAAAACTTGAAAAGGTT
TTTAATGATATGTATTCAACAATTTCTGCAAGAGTATCACATGAAAAATC
AAGAATTGATAATGTTGCAAATAGATTAAATAATGCACAACATAAAGTTA
ATCAAATTGTTGGTAGTAAACAAGCAATAACAGTATTTAGTAGTGCAAAA
TATCCAGCAGATAAGAAATGGGGAGATTATGTACCAATTTATAGTGGAAA
ACATAAATTACCATTTAAACCATCACATTATCATGGATTGAATAGTGAAG
ATAGTCCAATTAAAAAGAGACCAGAGGATTCATATTTGGATGTAAATGAT
TTAGTTTTCATTGAAAAGAGTATTGATACCACATCGAAAGAAGTGGAGGT
TAAGGAAGGTCTTGGTAGAATTCCAGCACAGATTCCAAGTGTTTCAAATC
TTTTATTATTTAATACTCAAGAGAATCCATACAAAAAAGTATTCAAATAC
ATTGGACAATTTATCAGGTGGTGATGGTGGTGAAGATGACTACACAATAT
TTGGTGACCAATTGTCAAAGAAGAAGAGATTGGGTGACGCTCCAGTCACC
GTTAAAGATGGTGATAGTAGAATCGATGCTGAAAACGTTAAAATCGGTTA
CGAACCTGGTACTTTTGAAATACCAGTTTACAATTTCCCTTCAATTTTAC
CACTTCCAAATGTAGCTGAAAATATTACATGGGCTGCTGAATCTCAAAGT
ATTGCTCCATCTCAAAAAGCGACTTTAAATTTATTACCAACTTATGATAA
TTATAACAAACAATAGTGTTAATAGTAACAATGATGACGATGATGATGAC
GATGATGATAATGGTGGCGGCGGTGGACCAGGTGGTGCTATAGGTGATTT
ATTGGCTGATATTCGTCGTGGTCATAAAAATAGATTAAAAAAAGCTGATG
TTGGTGGAGATAATGGTGATGGTGAAGATAATAAACCACCACCAGTTTCT
GATGGAGGTGGCGGTTTAATGGGTGATCTTTTCAAAAAATTAGCACTTCG
TAGACAATCCATTGCAACTACAAAATCAACTAAANANCNATCAAANTCAA
AGCAAAGGACGGANANTGTATGACC----------GACGCTCCAGTCACC
GTTAAAGATGGTGATAGTAGAATCGATGCTGAAAACGTTAAAATCGGTTA
CGAACCTGGTACTTTTGAAATACCAGTTTACAATTTCCCTTCAATTTTAC
CACTTCCAAATGTAGCTGAAAATATTACATGGGCTGCTGAATCTCAAAGT
ATTGCTCCATCTCAAAAAGCGACTTTAAATTTATTACCAACTTATGATAA
TTCAAACTCAGGTAGTGCACCTGTAAATCAATCTTCAGGTGGTGATAATA
ATGTAAATAATAATAATAATAATAACAATAGTAATAATAGTACAGGTATA
ATGCAACCACCACAACGGTACAAATGCACCACCACCTCCTCCACCACCAC
CACAATCTGCTAATGCCCCACCACCACCTCCACCACCACCTGTTTCTGCT
CCACCACCATTTAATCCACCAAGTGTTAATAGTAACAATGATGACGATGA
TGATGACGATGATGATAATGGTGGCGGCGGTGGACCAGGTGGTGCTATAG
GTGATTTATTGGCTGATATTCGTCGTGGTCATAAAAATAGATTAAAAAAA
GCTGATGTTGGTGGAGATAATGGTGATGGTGAAGATAATAAACCACCACC
AGTTTCTGATGGAGGTGGCGGTTTAATGGGTGATCTTTTCAAAAAATTAG
CACTTCGTAGACAATCCATTGCAACTACAAAATCAACTAAAAAACAATCA
AAATCAAAGAAAGAAGATACTGATGACCAAGATGGTGAATCTGATACCGA
TTCTTCTGAATGGGAATAAAATAATAAATTTNTGAAAAGAAAAAAAAAAA
AAAAAAAAAAAAAAAAAATAATAATAATAAAGTTTTATTAATTGTAATTG
TCTCATTTG

Gap gap included
Contig length 2099
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 2169233
End point 2170424
Strand (PLUS/MINUS) PLUS
Number of clones 13
Number of EST 19
Link to clone list U15594
List of clone(s)

est1=AFH785F,1,644
est2=AFJ538F,2,641
est3=VFO436F,16,525
est4=CHG392F,18,404
est5=VFN870E,18,1225
est6=VFD384F,24,655
est7=VFM667F,24,628
est8=SSM356F,30,326
est9=AFG527F,35,639
est10=VSC229E,1226,1563
est11=CHG392Z,1279,1565
est12=FC-IC0918E,1301,1531
est13=VFM667Z,1421,2016
est14=VFO436Z,1527,1905
est15=AFH785Z,1549,1996
est16=AFJ538Z,1563,1973
est17=SSH549Z,1569,2099
est18=AFG527Z,1575,2011
est19=VFD384Z,1816,1952
Translated Amino Acid sequence
hcwptgnitqk*iynkmttqiyqvpvvsnglretesilqivdsleklekvfndmystisa
rvsheksridnvanrlnnaqhkvnqivgskqaitvfssakypadkkwgdyvpiysgkhkl
pfkpshyhglnsedspikkrpedsyldvndlvfieksidttskevevkeglgripaqips
vsnlllfntqenpykkvfkyigqfirw*ww*r*lhniw*pivkeeeig*rsshr*rw***
nrc*kr*nrlrtwyf*ntslqfpfnfttskcs*kyymgc*iskycsisksdfkfitnl**
l*qtivlivtmmtmmmtmmimvaavdqvvl*viywlifvvvikid*kklmlveimvmvki
inhhqflmevav*wvifskn*HFVDNPLQLQNQLXXXQXQSKGRXXYD---

---DAPVTVKDGDSRIDAENVKIGYEPGTFEIPVYNFPSILPLPNVAENITWAAESQSIA
PSQKATLNLLPTYDNSNSGSAPVNQSSGGDNNVNNNNNNNNSNNSTGIMQPPQRYKCTTT
SSTTTTIC*cptttstttcfcstti*stkc***q**r***r***wwrrwtrwcyr*fig*
yssws*k*ikks*cwwr*w*w*r**tttsf*wrwrfng*sfqkists*tihcnykin*kt
ikikerry**prw*i*yrff*mgik**ixekkkkkkkkkknnnnkvllivivsf


Translated Amino Acid sequence (All Frames)
Frame A:
hcwptgnitqk*iynkmttqiyqvpvvsnglretesilqivdsleklekvfndmystisa
rvsheksridnvanrlnnaqhkvnqivgskqaitvfssakypadkkwgdyvpiysgkhkl
pfkpshyhglnsedspikkrpedsyldvndlvfieksidttskevevkeglgripaqips
vsnlllfntqenpykkvfkyigqfirw*ww*r*lhniw*pivkeeeig*rsshr*rw***
nrc*kr*nrlrtwyf*ntslqfpfnfttskcs*kyymgc*iskycsisksdfkfitnl**
l*qtivlivtmmtmmmtmmimvaavdqvvl*viywlifvvvikid*kklmlveimvmvki
inhhqflmevav*wvifskn*HFVDNPLQLQNQLXXXQXQSKGRXXYD---

---DAPVTVKDGDSRIDAENVKIGYEPGTFEIPVYNFPSILPLPNVAENITWAAESQSIA
PSQKATLNLLPTYDNSNSGSAPVNQSSGGDNNVNNNNNNNNSNNSTGIMQPPQRYKCTTT
SSTTTTIC*cptttstttcfcstti*stkc***q**r***r***wwrrwtrwcyr*fig*
yssws*k*ikks*cwwr*w*w*r**tttsf*wrwrfng*sfqkists*tihcnykin*kt
ikikerry**prw*i*yrff*mgik**ixekkkkkkkkkknnnnkvllivivsf

Frame B:
tvgllet*pknkyiik*qlksirfqlsvmvleklnlffkl*ihlknlkrflmiciqqflq
eyhmknqelimlqid*imhniklikllvvnkq*qylvvqniqqirngeimyqfiveniny
hlnhhiimd*ivkivqlkrdqrihiwm*mi*fslkrvliphrkkwrlrkvlvefqhrfqv
fqifyylilkrihtkkysntldnlsggdggeddytifgdqlskkkrlgdapvtvkdgdsr
idaenvkigyepgtfeipvynfpsilplpnvaenitwaaesqsiapsqkatlnllptydn
ynkq*c***q**r***r***wwrrwtrwcyr*fig*yssws*k*ikks*cwwr*w*w*r*
*tttsf*wrwrfng*sfqkists*tihcnykin*xxikxkakdgxcmt---

---tlqsplkmvivesmlktlksvtnlvllkyqftislqfyhfqm*lkilhgllnlkvll
hlkkrl*iyyqlmiiqtqvvhl*inlqvviim*iiiiiitiviivqv*cnhhngtnappp
pppppqsanappppppppvsapppfnppsvnsnndddddddddngggggpggaigdllad
irrghknrlkkadvggdngdgednkpppvsdgggglmgdlfkklalrrqsiattkstkkq
skskkedtddqdgesdtdssewe*nnkfxkrkkkkkkkkkiiiikfy*l*lshl

Frame C:
llaywkhnpkini**ndnsnlsgsscq*ws*rn*iyssncrft*kt*kgf**yvfnnfck
sit*kikn**cck*ik*ctt*s*sncw**tsnnsi**ckissr*emgrlctnl*wkt*it
i*titlswie**r*sn*ketrgfifgck*fsfh*key*yhiersgg*grsw*nsstdskc
fksfii*ysresiqksiqihwtiyqvvmvvkmttqylvtncqrrrdwvtlqsplkmvive
smlktlksvtnlvllkyqftislqfyhfqm*lkilhgllnlkvllhlkkrl*iyyqlmii
itnnsvnsnndddddddddngggggpggaigdlladirrghknrlkkadvggdngdgedn
kpppvsdgggglmgdlfkklalrrqsiattkstkxxsxskqrtxxv*---

---rsshr*rw***nrc*kr*nrlrtwyf*ntslqfpfnfttskcs*kyymgc*iskycs
isksdfkfitnl**fklr*ctcksifrw***ck******q****yrynattttvqmhhhl
lhhhhnllmphhhlhhhlfllhhhlihqvlivtmmtmmmtmmimvaavdqvvl*viywli
fvvvikid*kklmlveimvmvkiinhhqflmevav*wvifskn*hfvdnplqlqnqlknn
qnqrkkilmtkmvnlipillngnkiinx*kekkkkkkkkk****sfincncli

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15594-1 (Contig-U15594-1Q)
/CSM_Contig/Contig-U15594-1Q.Seq.d
(2109 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15594-1 (Contig-U15594-1Q) /CSM_Contig/Conti... 1844 0.0
Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U10519-1 (Contig-U10519-1Q) /CSM_Contig/Conti... 44 9e-04
Contig-U09968-1 (Contig-U09968-1Q) /CSM_Contig/Conti... 44 9e-04
Contig-U15600-1 (Contig-U15600-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U10892-1 (Contig-U10892-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U10460-1 (Contig-U10460-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U10343-1 (Contig-U10343-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U09490-1 (Contig-U09490-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U16509-1 (Contig-U16509-1Q) /CSM_Contig/Conti... 40 0.014

>Contig-U15594-1 (Contig-U15594-1Q) /CSM_Contig/Contig-U15594-1Q.Seq.d
Length = 2109

Score = 1844 bits (930), Expect = 0.0
Identities = 930/930 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggaaacataacccaaaaataaatatataataaaatgacaactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggaaacataacccaaaaataaatatataataaaatgacaactcaa 60


Query: 61 atctatcaggttccagttgtcagtaatggtcttagagaaactgaatctattcttcaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctatcaggttccagttgtcagtaatggtcttagagaaactgaatctattcttcaaatt 120


Query: 121 gtagattcacttgaaaaacttgaaaaggtttttaatgatatgtattcaacaatttctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagattcacttgaaaaacttgaaaaggtttttaatgatatgtattcaacaatttctgca 180


Query: 181 agagtatcacatgaaaaatcaagaattgataatgttgcaaatagattaaataatgcacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagtatcacatgaaaaatcaagaattgataatgttgcaaatagattaaataatgcacaa 240


Query: 241 cataaagttaatcaaattgttggtagtaaacaagcaataacagtatttagtagtgcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cataaagttaatcaaattgttggtagtaaacaagcaataacagtatttagtagtgcaaaa 300


Query: 301 tatccagcagataagaaatggggagattatgtaccaatttatagtggaaaacataaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatccagcagataagaaatggggagattatgtaccaatttatagtggaaaacataaatta 360


Query: 361 ccatttaaaccatcacattatcatggattgaatagtgaagatagtccaattaaaaagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccatttaaaccatcacattatcatggattgaatagtgaagatagtccaattaaaaagaga 420


Query: 421 ccagaggattcatatttggatgtaaatgatttagttttcattgaaaagagtattgatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccagaggattcatatttggatgtaaatgatttagttttcattgaaaagagtattgatacc 480


Query: 481 acatcgaaagaagtggaggttaaggaaggtcttggtagaattccagcacagattccaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acatcgaaagaagtggaggttaaggaaggtcttggtagaattccagcacagattccaagt 540


Query: 541 gtttcaaatcttttattatttaatactcaagagaatccatacaaaaaagtattcaaatac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtttcaaatcttttattatttaatactcaagagaatccatacaaaaaagtattcaaatac 600


Query: 601 attggacaatttatcaggtggtgatggtggtgaagatgactacacaatatttggtgacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attggacaatttatcaggtggtgatggtggtgaagatgactacacaatatttggtgacca 660


Query: 661 attgtcaaagaagaagagattgggtgacgctccagtcaccgttaaagatggtgatagtag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attgtcaaagaagaagagattgggtgacgctccagtcaccgttaaagatggtgatagtag 720


Query: 721 aatcgatgctgaaaacgttaaaatcggttacgaacctggtacttttgaaataccagttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatcgatgctgaaaacgttaaaatcggttacgaacctggtacttttgaaataccagttta 780


Query: 781 caatttcccttcaattttaccacttccaaatgtagctgaaaatattacatgggctgctga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caatttcccttcaattttaccacttccaaatgtagctgaaaatattacatgggctgctga 840


Query: 841 atctcaaagtattgctccatctcaaaaagcgactttaaatttattaccaacttatgataa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atctcaaagtattgctccatctcaaaaagcgactttaaatttattaccaacttatgataa 900


Query: 901 ttataacaaacaatagtgttaatagtaaca 930
||||||||||||||||||||||||||||||
Sbjct: 901 ttataacaaacaatagtgttaatagtaaca 930


Score = 924 bits (466), Expect = 0.0
Identities = 528/535 (98%)
Strand = Plus / Plus


Query: 960 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1019


Query: 1020 ggtcataaaaatagattnnnnnnngctgatgttggtggagataatggtgatggtgaagat 1079
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1020 ggtcataaaaatagattaaaaaaagctgatgttggtggagataatggtgatggtgaagat 1079


Query: 1080 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1139


Query: 1140 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaanancnatcaaantca 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaanancnatcaaantca 1199


Query: 1200 aagcaaaggacgganantgtatgaccnnnnnnnnnngacgctccagtcaccgttaaagat 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 aagcaaaggacgganantgtatgaccnnnnnnnnnngacgctccagtcaccgttaaagat 1259


Query: 1260 ggtgatagtagaatcgatgctgaaaacgttaaaatcggttacgaacctggtacttttgaa 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 ggtgatagtagaatcgatgctgaaaacgttaaaatcggttacgaacctggtacttttgaa 1319


Query: 1320 ataccagtttacaatttcccttcaattttaccacttccaaatgtagctgaaaatattaca 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 ataccagtttacaatttcccttcaattttaccacttccaaatgtagctgaaaatattaca 1379


Query: 1380 tgggctgctgaatctcaaagtattgctccatctcaaaaagcgactttaaatttattacca 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 tgggctgctgaatctcaaagtattgctccatctcaaaaagcgactttaaatttattacca 1439


Query: 1440 acttatgataattcaaactcaggtagtgcacctgtaaatcaatcttcaggtggtg 1494
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 acttatgataattcaaactcaggtagtgcacctgtaaatcaatcttcaggtggtg 1494


Score = 593 bits (299), Expect = e-169
Identities = 316/323 (97%)
Strand = Plus / Plus


Query: 1717 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1776


Query: 1777 ggtcataaaaatagattnnnnnnngctgatgttggtggagataatggtgatggtgaagat 1836
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1777 ggtcataaaaatagattaaaaaaagctgatgttggtggagataatggtgatggtgaagat 1836


Query: 1837 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1837 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1896


Query: 1897 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaaaaacaatcaaaatca 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaaaaacaatcaaaatca 1956


Query: 1957 aagaaagaagatactgatgaccaagatggtgaatctgataccgattcttctgaatgggaa 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 aagaaagaagatactgatgaccaagatggtgaatctgataccgattcttctgaatgggaa 2016


Query: 2017 taaaataataaatttntgaaaag 2039
|||||||||||||||||||||||
Sbjct: 2017 taaaataataaatttntgaaaag 2039


Score = 430 bits (217), Expect = e-120
Identities = 217/217 (100%)
Strand = Plus / Plus


Query: 1236 gacgctccagtcaccgttaaagatggtgatagtagaatcgatgctgaaaacgttaaaatc 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gacgctccagtcaccgttaaagatggtgatagtagaatcgatgctgaaaacgttaaaatc 745


Query: 1296 ggttacgaacctggtacttttgaaataccagtttacaatttcccttcaattttaccactt 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggttacgaacctggtacttttgaaataccagtttacaatttcccttcaattttaccactt 805


Query: 1356 ccaaatgtagctgaaaatattacatgggctgctgaatctcaaagtattgctccatctcaa 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ccaaatgtagctgaaaatattacatgggctgctgaatctcaaagtattgctccatctcaa 865


Query: 1416 aaagcgactttaaatttattaccaacttatgataatt 1452
|||||||||||||||||||||||||||||||||||||
Sbjct: 866 aaagcgactttaaatttattaccaacttatgataatt 902


Score = 430 bits (217), Expect = e-120
Identities = 217/217 (100%)
Strand = Plus / Plus


Query: 686 gacgctccagtcaccgttaaagatggtgatagtagaatcgatgctgaaaacgttaaaatc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 gacgctccagtcaccgttaaagatggtgatagtagaatcgatgctgaaaacgttaaaatc 1295


Query: 746 ggttacgaacctggtacttttgaaataccagtttacaatttcccttcaattttaccactt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 ggttacgaacctggtacttttgaaataccagtttacaatttcccttcaattttaccactt 1355


Query: 806 ccaaatgtagctgaaaatattacatgggctgctgaatctcaaagtattgctccatctcaa 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 ccaaatgtagctgaaaatattacatgggctgctgaatctcaaagtattgctccatctcaa 1415


Query: 866 aaagcgactttaaatttattaccaacttatgataatt 902
|||||||||||||||||||||||||||||||||||||
Sbjct: 1416 aaagcgactttaaatttattaccaacttatgataatt 1452


Score = 416 bits (210), Expect = e-116
Identities = 232/243 (95%)
Strand = Plus / Plus


Query: 1717 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1019


Query: 1777 ggtcataaaaatagattnnnnnnngctgatgttggtggagataatggtgatggtgaagat 1836
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1020 ggtcataaaaatagattaaaaaaagctgatgttggtggagataatggtgatggtgaagat 1079


Query: 1837 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1139


Query: 1897 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaaaaacaatcaaaatca 1956
||||||||||||||||||||||||||||||||||||||||||||| | | |||||| |||
Sbjct: 1140 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaanancnatcaaantca 1199


Query: 1957 aag 1959
|||
Sbjct: 1200 aag 1202


Score = 416 bits (210), Expect = e-116
Identities = 232/243 (95%)
Strand = Plus / Plus


Query: 960 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 aatggtggcggcggtggaccaggtggtgctataggtgatttattggctgatattcgtcgt 1776


Query: 1020 ggtcataaaaatagattnnnnnnngctgatgttggtggagataatggtgatggtgaagat 1079
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1777 ggtcataaaaatagattaaaaaaagctgatgttggtggagataatggtgatggtgaagat 1836


Query: 1080 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1837 aataaaccaccaccagtttctgatggaggtggcggtttaatgggtgatcttttcaaaaaa 1896


Query: 1140 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaanancnatcaaantca 1199
||||||||||||||||||||||||||||||||||||||||||||| | | |||||| |||
Sbjct: 1897 ttagcacttcgtagacaatccattgcaactacaaaatcaactaaaaaacaatcaaaatca 1956


Query: 1200 aag 1202
|||
Sbjct: 1957 aag 1959


Score = 81.8 bits (41), Expect = 4e-15
Identities = 41/41 (100%)
Strand = Plus / Plus


Query: 2069 taataataataaagttttattaattgtaattgtctcatttg 2109
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2069 taataataataaagttttattaattgtaattgtctcatttg 2109


Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 1540 gtacaggtataatgcaaccaccacaacggtacaaatg 1576
|||||||||||||||||||||||||||||||||||||
Sbjct: 1540 gtacaggtataatgcaaccaccacaacggtacaaatg 1576


Score = 32.2 bits (16), Expect = 3.3
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1672 agtgttaatagtaaca 1687
||||||||||||||||
Sbjct: 915 agtgttaatagtaaca 930


Score = 32.2 bits (16), Expect = 3.3
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 915 agtgttaatagtaaca 930
||||||||||||||||
Sbjct: 1672 agtgttaatagtaaca 1687


Score = 32.2 bits (16), Expect = 3.3
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1672 agtgttaatagtaaca 1687
||||||||||||||||
Sbjct: 1672 agtgttaatagtaaca 1687


>Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Contig-U12755-1Q.Seq.d
Length = 987

Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus


Query: 617 ggtggtgatggtggtgaagatga 639
|||||||||||||||||||||||
Sbjct: 517 ggtggtgatggtggtgaagatga 495


Score = 34.2 bits (17), Expect = 0.85
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 617 ggtggtgatggtggtga 633
|||||||||||||||||
Sbjct: 526 ggtggtgatggtggtga 510


>Contig-U10519-1 (Contig-U10519-1Q) /CSM_Contig/Contig-U10519-1Q.Seq.d
Length = 398

Score = 44.1 bits (22), Expect = 9e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggaaaca 22
||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggaaaca 22


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 57,488
Number of Sequences: 8402
Number of extensions: 57488
Number of successful extensions: 7051
Number of sequences better than 10.0: 726
length of query: 2109
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2092
effective length of database: 7,932,708
effective search space: 16595225136
effective search space used: 16595225136
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 1
Homology vs DNA
Query= Contig-U15594-1 (Contig-U15594-1Q) /CSM_Contig/Contig-U15594-1Q.Seq.d
(2109 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ326538) Dictyostelium discoideum cDNA clone:dda16j21, 5' ... 1156 0.0 2
(BJ327424) Dictyostelium discoideum cDNA clone:dda20k09, 5' ... 1154 0.0 2
(BJ417750) Dictyostelium discoideum cDNA clone:ddv28l18, 5' ... 1122 0.0 2
(BJ416477) Dictyostelium discoideum cDNA clone:ddv26e18, 5' ... 1118 0.0 2
(BJ325403) Dictyostelium discoideum cDNA clone:dda14e07, 5' ... 1096 0.0 2
(BJ435850) Dictyostelium discoideum cDNA clone:ddv28l18, 3' ... 728 0.0 3
(BJ412312) Dictyostelium discoideum cDNA clone:ddv7h21, 5' e... 593 0.0 3
(BJ417076) Dictyostelium discoideum cDNA clone:ddv29h10, 5' ... 1009 0.0 1
(BJ365294) Dictyostelium discoideum cDNA clone:ddc34h23, 5' ... 767 0.0 1
(AU038312) Dictyostelium discoideum slug cDNA, clone SSH549. 291 e-168 5
(AU262413) Dictyostelium discoideum vegetative cDNA clone:VS... 505 e-138 1
(BJ435250) Dictyostelium discoideum cDNA clone:ddv26e18, 3' ... 283 e-135 7
(AU074884) Dictyostelium discoideum slug cDNA, clone SSM356. 476 e-129 1
(BJ342496) Dictyostelium discoideum cDNA clone:dda14e07, 3' ... 291 e-125 5
(BJ343694) Dictyostelium discoideum cDNA clone:dda16j21, 3' ... 291 e-125 5
(BJ344753) Dictyostelium discoideum cDNA clone:dda20k09, 3' ... 291 e-117 3
(BJ379433) Dictyostelium discoideum cDNA clone:ddc34h23, 3' ... 375 e-105 2
(BJ435994) Dictyostelium discoideum cDNA clone:ddv29h10, 3' ... 198 e-101 4
(AU271970) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 365 5e-96 1
(AU271969) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 365 5e-96 1
(BJ430588) Dictyostelium discoideum cDNA clone:ddv7h21, 3' e... 186 2e-42 1
(AB148197) Homo sapiens DNA, STS on chromosome 22, D22S0197i... 46 5e-06 2
(DJ473288) Method for analysing genome using microsatellite ... 46 5e-06 2
(Z97192) Human DNA sequence from clone RP1-29C18 on chromoso... 46 6e-04 4
(AL591074) Human DNA sequence from clone XXyac-60D10 on chro... 40 0.001 7
(AL353658) Human DNA sequence from clone RP11-358D14 on chro... 44 0.001 3
(BJ389052) Dictyostelium discoideum cDNA clone:dds17f07, 5' ... 44 0.001 2
(BZ831715) CH240_257L24.TV CHORI-240 Bos taurus genomic clon... 38 0.001 3
(AC105344) Homo sapiens BAC clone RP11-585B9 from 2, complet... 44 0.002 3
(AJ955101) Sus scrofa EST, clone C0007736b17, 3' direction. 38 0.003 3
(AJ955734) Sus scrofa EST, clone C0007736b17, 5' direction. 38 0.003 3
(CJ462160) Macaca fascicularis mRNA, clone: QmoA-15222, 5' e... 44 0.003 2
(AC153186) Bos taurus clone CH240-29D19, WORKING DRAFT SEQUE... 42 0.005 5
(AP006262) Homo sapiens genomic DNA, 8q24.3, PCR product: KP... 42 0.006 4
(AC200930) Strongylocentrotus purpuratus clone R3-1021N1, WO... 44 0.016 6
(CL383485) RPCI44_326B18.f RPCI-44 Sus scrofa genomic clone ... 40 0.029 4
(AC025839) Homo sapiens chromosome 8, clone RP11-370K2, comp... 42 0.039 4
(BZ164233) CH230-246O13.TJB CHORI-230 Segment 2 Rattus norve... 42 0.053 3
(CT034862) Sus scrofa genomic clone CH242-19E6, genomic surv... 34 0.065 3
(AC105306) Bos taurus clone rp42-158g13, complete sequence. 34 0.076 8
(G67741) D4Mon22 RPCI-23 mouse BAC clone 118E21 Mus musculus... 36 0.089 3
(AL392083) Human DNA sequence from clone RP11-29A19 on chrom... 42 0.11 7
(AJ391551) Canis familiaris STS Ren12i18. 36 0.11 3
(EL212150) EB3RODY02J1SEU 8-day Arabidopsis seedlings, aeria... 42 0.12 2
(AL358034) Human DNA sequence from clone RP11-51K14 on chrom... 42 0.12 4
(CE643839) tigr-gss-dog-17000366888368 Dog Library Canis lup... 34 0.14 3
(EJ413174) 1093012162960 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.16 3
(CJ452770) Macaca fascicularis mRNA, clone: QflA-18440, 5' e... 44 0.17 2
(EK243218) 1095460242153 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.17 2
(BZ115869) CH230-255D7.TVB CHORI-230 Segment 2 Rattus norveg... 36 0.17 3
(AC187988) Canis lupus familiaris chromosome 14 clone XX-526... 38 0.27 7
(CR311361) mte1-33M2FM1 BAC end, cultivar Jemalong A17 of Me... 44 0.29 2
(CV217717) EST877427 non-normalized T1 cDNA library Trichomo... 50 0.34 1
(CV216793) EST876503 non-normalized T1 cDNA library Trichomo... 50 0.34 1
(BJ389017) Dictyostelium discoideum cDNA clone:dds17l01, 5' ... 38 0.35 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 38 0.42 12
(AC068358) Homo sapiens chromosome 8 clone RP11-113I18 map 8... 36 0.42 6
(AJ391552) Canis familiaris STS Ren13G23. 36 0.43 3
(AP001470) Homo sapiens genomic DNA, chromosome 21 clone:PCR... 34 0.46 3
(AC147769) Homo sapiens chromosome 16 clone PCR-16A01, compl... 34 0.48 4
(AC230309) Bos taurus clone CH240-513L22, WORKING DRAFT SEQU... 44 0.55 5
(AC222626) Bos taurus clone CH240-443I1, WORKING DRAFT SEQUE... 36 0.57 4
(CJ455732) Macaca fascicularis mRNA, clone: QflA-21537, 5' e... 38 0.63 3
(BJ389135) Dictyostelium discoideum cDNA clone:dds17k14, 5' ... 36 0.64 2
(AL590327) Human chromosome 14 DNA sequence Partial sequence... 38 0.65 3
(CJ491697) Macaca fascicularis mRNA, clone: QtsA-19643, 5' e... 38 0.67 2
(BG535503) 602563188F1 NIH_MGC_77 Homo sapiens cDNA clone IM... 36 0.69 3
(CQ308851) Sequence 19956 from Patent WO0186003. 38 0.74 3
(CQ233530) Sequence 20369 from Patent WO0157273. 38 0.74 3
(CQ150225) Sequence 20247 from Patent WO0157276. 38 0.74 3
(CQ111443) Sequence 20302 from Patent WO0157272. 38 0.74 3
(EJ106529) 1092343138849 Global-Ocean-Sampling_GS-27-01-01-1... 38 0.86 3
(CQ330889) Sequence 4983 from Patent WO0157275. 34 0.92 3
(CQ294047) Sequence 5152 from Patent WO0186003. 34 0.92 3
(CQ256936) Sequence 5197 from Patent WO0157277. 34 0.92 3
(CQ218335) Sequence 5174 from Patent WO0157273. 34 0.92 3
(CQ202749) Sequence 5026 from Patent WO0157271. 34 0.92 3
(CQ173580) Sequence 4976 from Patent WO0157274. 34 0.92 3
(CQ135061) Sequence 5083 from Patent WO0157276. 34 0.92 3
(CQ096298) Sequence 5157 from Patent WO0157272. 34 0.92 3
(CQ069270) Sequence 5070 from Patent WO0157278. 34 0.92 3
(CQ054059) Sequence 4879 from Patent WO0157270. 34 0.92 3
(BE067341) PM1-BT0350-281299-002-d03 BT0350 Homo sapiens cDN... 32 0.97 3
(BS000139) Pan troglodytes chromosome 22 clone:LA-PCR-3, map... 36 0.98 3
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 34 0.99 10
(BJ366017) Dictyostelium discoideum cDNA clone:ddc37o11, 5' ... 34 1.0 2
(BJ422131) Dictyostelium discoideum cDNA clone:ddv44p20, 5' ... 34 1.1 3
(CU914730) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.1 5
(DX546841) GH_MBb0087L13r GH_MBb Gossypium hirsutum genomic ... 36 1.3 3
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 32 1.4 13
(CR450690) Zebrafish DNA sequence from clone CH211-78C14 in ... 48 1.4 1
(BX571709) Zebrafish DNA sequence from clone DKEY-251M8 in l... 48 1.4 1
(AC131026) Medicago truncatula clone mth2-6e18, complete seq... 48 1.4 1
(DU179526) 1098553492535 CHORI-243 Ovis aries genomic clone ... 48 1.4 1
(CV358094) MR4-UT0052-180900-201-f03 UT0052 Homo sapiens cDN... 48 1.4 1
(CJ480847) Macaca fascicularis mRNA, clone: QtrA-16413, 5' e... 48 1.4 1
(CJ465123) Macaca fascicularis mRNA, clone: QnpA-14144, 5' e... 48 1.4 1
(CJ438015) Macaca fascicularis mRNA, clone: QccE-15215, 5' e... 48 1.4 1
(CA113138) SCEZLB1009C11.g LB1 Saccharum officinarum cDNA cl... 48 1.4 1
(AX647501) Sequence 1693 from Patent EP1270724. 34 1.4 3
(AC027343) Homo sapiens chromosome 5 clone CTD-2296D1, compl... 38 1.4 4
(BZ850775) CH240_278A3.TJ CHORI-240 Bos taurus genomic clone... 34 1.5 3
(EF362521) Bryum bornholmense tRNA-Gly (trnG) gene, intron; ... 32 1.6 4
(BJ327293) Dictyostelium discoideum cDNA clone:dda19m19, 5' ... 46 1.6 2
(AY163075) Bryum orthothecium tRNA-Gly (trnG) gene, intron s... 32 1.6 4
(DQ536463) Bryum rubens tRNA-Gly (trnG) gene, intron; chloro... 32 1.7 4
(DQ536451) Bryum bornholmense tRNA-Gly (trnG) gene, intron; ... 32 1.7 4
(AY163064) Bryum capillare tRNA-Gly (trnG) gene, intron sequ... 32 1.7 4
(EF362523) Plagiobryum capillare tRNA-Gly (trnG) gene, intro... 32 1.7 4
(DQ536453) Plagiobryum capillare tRNA-Gly (trnG) gene, intro... 32 1.8 4
(CQ343612) Sequence 17706 from Patent WO0157275. 34 1.9 3
(CQ306551) Sequence 17656 from Patent WO0186003. 34 1.9 3
(CQ269501) Sequence 17762 from Patent WO0157277. 34 1.9 3
(CQ231327) Sequence 18166 from Patent WO0157273. 34 1.9 3
(CQ207851) Sequence 10128 from Patent WO0157271. 34 1.9 3
(CQ183455) Sequence 14851 from Patent WO0157274. 34 1.9 3
(CQ148071) Sequence 18093 from Patent WO0157276. 34 1.9 3
(CQ109420) Sequence 18279 from Patent WO0157272. 34 1.9 3
(CQ078450) Sequence 14250 from Patent WO0157278. 34 1.9 3
(CQ059038) Sequence 9858 from Patent WO0157270. 34 1.9 3
(BJ444035) Dictyostelium discoideum cDNA clone:ddv55b05, 3' ... 46 2.0 2
(CJ456919) Macaca fascicularis mRNA, clone: QflA-22773, 5' e... 34 2.1 3
(AC118283) Homo sapiens BAC clone RP11-1398P2 from 4, comple... 42 2.1 4
(BS000652) Pan troglodytes chromosome Y clone: PTBY-013L08. 42 2.2 8
(CJ439557) Macaca fascicularis mRNA, clone: QccE-16831, 5' e... 36 2.2 2
(CJ454450) Macaca fascicularis mRNA, clone: QflA-20189, 5' e... 36 2.2 3
(AC198676) Rhesus Macaque BAC CH250-204A18 () complete sequ... 38 2.3 7
(CJ455013) Macaca fascicularis mRNA, clone: QflA-20777, 5' e... 34 2.3 3
(CJ454973) Macaca fascicularis mRNA, clone: QflA-20737, 5' e... 38 2.4 3
(EJ549825) 1092959432727 Global-Ocean-Sampling_GS-29-01-01-1... 36 2.5 2
(BJ327422) Dictyostelium discoideum cDNA clone:dda20j12, 5' ... 42 2.5 2
(CJ490935) Macaca fascicularis mRNA, clone: QtsA-18748, 5' e... 40 2.5 2
(EK260711) 1095462136102 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.5 2
(EJ548237) 1092959419191 Global-Ocean-Sampling_GS-29-01-01-1... 36 2.6 2
(BX510312) Zebrafish DNA sequence from clone CH211-240B21 in... 36 2.7 2
(AL773579) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 32 2.7 2
(BX119919) Human DNA sequence from clone RP11-987D21 on chro... 36 2.8 4
(AC122618) Rattus norvegicus clone CH230-65D16, WORKING DRAF... 38 2.8 7
(CJ484374) Macaca fascicularis mRNA, clone: QtsA-11913, 5' e... 34 2.9 4
(CZ946941) 290165 Tomato EcoRI BAC Library Solanum lycopersi... 44 2.9 2
(AC091066) Homo sapiens chromosome 11 clone RP11-651C3 map 1... 36 2.9 3
(CU137653) Human DNA sequence from clone XX-C0511C0695L on c... 36 2.9 4
(AC140428) Mus musculus BAC clone RP23-100P8 from chromosome... 36 2.9 6
(CE262942) tigr-gss-dog-17000346651053 Dog Library Canis lup... 44 3.0 2
(FE781683) CCAG12207.b3 CCAG Petrolisthes cinctipes heart, g... 38 3.0 2
(BJ326263) Dictyostelium discoideum cDNA clone:dda15g03, 5' ... 38 3.0 3
(ER626298) 1093018204709 Global-Ocean-Sampling_GS-36-01-01-2... 34 3.1 3
(BJ363819) Dictyostelium discoideum cDNA clone:ddc28m16, 5' ... 36 3.1 3
(CG987732) CH240_138H11.TJ CHORI-240 Bos taurus genomic clon... 36 3.4 3
(AC181614) Strongylocentrotus purpuratus clone R3-1106O17, W... 36 3.4 8
(BJ423343) Dictyostelium discoideum cDNA clone:ddv48k20, 5' ... 36 3.6 2
(AC207611) Homo sapiens FOSMID clone ABC10-1622570O17 from c... 38 3.7 3
(AC185388) Callicebus moloch clone LB5-282M14, WORKING DRAFT... 34 3.7 8
(CQ296348) Sequence 7453 from Patent WO0186003. 38 3.8 3
(CQ220536) Sequence 7375 from Patent WO0157273. 38 3.8 3
(CQ137203) Sequence 7225 from Patent WO0157276. 38 3.8 3
(CQ098310) Sequence 7169 from Patent WO0157272. 38 3.8 3
(AC147067) Homo sapiens BAC clone RP13-1016M1 from 4, comple... 42 3.8 3
(AC016671) Homo sapiens BAC clone RP11-12J24 from Y, complet... 38 4.0 3
(AC143228) Macaca mulatta clone CH250-270O12, WORKING DRAFT ... 38 4.2 3
(A45331) Sequence 1 from Patent WO9517522. 44 4.4 2
(AR061136) Sequence 1 from patent US 5843647. 44 4.4 2
(X73968) H.sapiens (clone wg0e7) repeat region DNA. 44 4.4 2
(CT407408) Sus scrofa genomic clone CH242-292K9, genomic sur... 34 4.4 3
(BJ416812) Dictyostelium discoideum cDNA clone:ddv27l09, 5' ... 44 4.6 2
(AC100804) Homo sapiens chromosome 8, clone CTD-3119E5, comp... 36 4.7 3
(AR665219) Sequence 6260 from patent US 6900016. 32 4.7 3
(M11449) Yeast mitochondrial ori2-ori7 region DNA with putat... 34 4.8 3
(AC167497) Bos taurus clone CH240-193N1, WORKING DRAFT SEQUE... 34 5.1 9
(AC179097) Strongylocentrotus purpuratus clone R3-1107P7, WO... 44 5.3 5
(BJ324328) Dictyostelium discoideum cDNA clone:dda5e23, 5' e... 36 5.4 3
(BJ396732) Dictyostelium discoideum cDNA clone:dds43a19, 5' ... 40 5.4 2
(AP008216) Oryza sativa (japonica cultivar-group) genomic DN... 46 5.4 1
(AC078840) Oryza sativa chromosome 10 BAC OSJNBb0073N24 geno... 46 5.4 1
(BD100413) Novel genes cloned in humanneuroblastoma and frag... 46 5.4 1
(BD020475) Novel gene and novel gene fragment cloned in huma... 46 5.4 1
(AJ251163) Dictyostelium discoideum dymB gene for dynamin B ... 46 5.4 1
(AC160572) Bos taurus clone CH240-96I19, WORKING DRAFT SEQUE... 46 5.4 1
(AC160165) Bos taurus clone CH240-82M22, WORKING DRAFT SEQUE... 46 5.4 1
(CU856265) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.4 1
(AC182872) Bos taurus clone CH240-239D22, WORKING DRAFT SEQU... 46 5.4 1
(AC166213) Macropus eugenii clone ME_KBa-32I6, WORKING DRAFT... 46 5.4 1
(AC165458) Bos taurus clone CH240-95M24, *** SEQUENCING IN P... 46 5.4 1
(FH996641) CHO_OF6882xd12f1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 5.4 1
(FH914839) CHO_ONF006xk10f1.ab1 CHO_ONF Nicotiana tabacum ge... 46 5.4 1
(FH901406) CHO_ONF080xe20f1.ab1 CHO_ONF Nicotiana tabacum ge... 46 5.4 1
(FH648028) CHO_OF4991xb13r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 5.4 1
(ET842705) CHO_OF132xg01f1.ab1 CHO_OF Nicotiana tabacum geno... 46 5.4 1
(ER583948) 1093015856493 Global-Ocean-Sampling_GS-36-01-01-2... 46 5.4 1
(EK371140) 1095469417254 Global-Ocean-Sampling_GS-31-01-01-1... 46 5.4 1
(EK006963) 1092955109457 Global-Ocean-Sampling_GS-31-01-01-1... 46 5.4 1
(EJ479627) 1095403461198 Global-Ocean-Sampling_GS-28-01-01-1... 46 5.4 1
(EJ441855) 1093015307783 Global-Ocean-Sampling_GS-28-01-01-1... 46 5.4 1
(EI243197) OR__Ba0042N24.f OR__Ba Oryza rufipogon genomic cl... 46 5.4 1
(DU255615) 1098574138033 CHORI-243 Ovis aries genomic clone ... 46 5.4 1
(CL825051) OR_CBa0045D09.r OR_CBa Oryza rufipogon genomic cl... 46 5.4 1
(DY981352) CLSS3357.b1_I24.ab1 CLS(LMS) lettuce sativa Lactu... 46 5.4 1
(DW133731) CLSY1206.b1_K13.ab1 CLS(XYZ) lettuce sativa Lactu... 46 5.4 1
(DW129483) CLSX6247.b1_N01.ab1 CLS(XYZ) lettuce sativa Lactu... 46 5.4 1
(DW129280) CLSX6059.b1_F04.ab1 CLS(XYZ) lettuce sativa Lactu... 46 5.4 1
(DW126976) CLSX3538.b1_C21.ab1 CLS(XYZ) lettuce sativa Lactu... 46 5.4 1
(DW126195) CLSX2705.b1_A05.ab1 CLS(XYZ) lettuce sativa Lactu... 46 5.4 1
(DW125214) CLSX1701.b1_J17.ab1 CLS(XYZ) lettuce sativa Lactu... 46 5.4 1
(DW123538) CLRZ734.b1_L16.ab1 CLR(XYZ) lettuce serriola Lact... 46 5.4 1
(DW122124) CLRZ4239.b1_M03.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW121614) CLRZ3755.b2_F04.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW120211) CLRY8835.b1_E01.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW120042) CLRY8662.b1_K06.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW119575) CLRY8190.b2_L07.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW119199) CLRY7804.b1_H07.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW112742) CLRX9672.b1_O17.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW112201) CLRX9119.b1_M24.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW112138) CLRX9052.b1_G08.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW111357) CLRX8253.b1_J23.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW111299) CLRX8193.b1_B09.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW106662) CLRX4365.b1_J11.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW105617) CLRX3447.b1_N22.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW105429) CLRX3255.b1_N21.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DW104472) CLRX2276.b1_H18.ab1 CLR(XYZ) lettuce serriola Lac... 46 5.4 1
(DR413110) gPGC_EST02952 Embryonic gonadal PGC cDNA Library ... 46 5.4 1
(CK442442) GQ0013.TB.1_A01 GQ001: Male strobili developmenta... 46 5.4 1
(CJ490703) Macaca fascicularis mRNA, clone: QtsA-18508, 5' e... 46 5.4 1
(CJ471772) Macaca fascicularis mRNA, clone: QorA-11481, 5' e... 46 5.4 1
(CJ469916) Macaca fascicularis mRNA, clone: QnpA-21354, 5' e... 46 5.4 1
(CJ465012) Macaca fascicularis mRNA, clone: QnpA-13962, 5' e... 46 5.4 1
(CJ457438) Macaca fascicularis mRNA, clone: QflA-23322, 5' e... 46 5.4 1
(CJ454765) Macaca fascicularis mRNA, clone: QflA-20521, 5' e... 46 5.4 1
(CJ443492) Macaca fascicularis mRNA, clone: QccE-21052, 5' e... 46 5.4 1
(BJ446170) Dictyostelium discoideum cDNA clone:ddv61j23, 3' ... 46 5.4 1
(BJ444996) Dictyostelium discoideum cDNA clone:ddv58i05, 3' ... 46 5.4 1
(BJ442328) Dictyostelium discoideum cDNA clone:ddv49d18, 3' ... 46 5.4 1
(BJ438276) Dictyostelium discoideum cDNA clone:ddv36n22, 3' ... 46 5.4 1
(BJ411594) Dictyostelium discoideum cDNA clone:ddv5d03, 5' e... 46 5.4 1
(BJ379563) Dictyostelium discoideum cDNA clone:ddc35d08, 3' ... 46 5.4 1
(BJ356403) Dictyostelium discoideum cDNA clone:dda60o03, 3' ... 46 5.4 1
(BJ354378) Dictyostelium discoideum cDNA clone:dda53m12, 3' ... 46 5.4 1
(FD369025) CBPN46616.b1 CBPN: Subtracted channel catfish cDN... 46 5.4 1
(FD064897) CBPO8881.b1 CBPO: Normalized channel catfish cDNA... 46 5.4 1
(FD058342) CBPO530.g1 CBPO: Normalized channel catfish cDNA ... 46 5.4 1
(EF107099) Uncultured marine bacterium EB0_49D07 genomic seq... 46 5.4 1
(AX345535) Sequence 606 from Patent WO0200928. 42 5.5 3
(BJ370816) Dictyostelium discoideum cDNA clone:ddc55d16, 5' ... 34 5.7 2
(AV199870) Caenorhabditis elegans cDNA clone:yk552h11 : 3' e... 32 6.0 3
(T01005) wEST01726 Early embryo, Stratagene (cat. #937007) C... 32 6.0 3
(CI020206) Oryza sativa Japonica Group cDNA, clone: 007-M062... 36 6.0 2
(EL497211) H09_PFBAMHI-S-T7-PLATE4A.AB1 Blood stage Plasmodi... 36 6.1 3
(CR299354) mte1-17A14RM1 BAC end, cultivar Jemalong A17 of M... 40 6.5 2
(EK055169) 1092960010934 Global-Ocean-Sampling_GS-31-01-01-1... 44 7.2 2
(BF878752) MR0-ET0107-211100-003-d02 ET0107 Homo sapiens cDN... 38 7.3 2
(EJ422102) 1093012238913 Global-Ocean-Sampling_GS-28-01-01-1... 38 7.3 2
(ER603642) 1093016260076 Global-Ocean-Sampling_GS-36-01-01-2... 34 7.4 3
(CJ462829) Macaca fascicularis mRNA, clone: QnpA-10551, 5' e... 34 7.5 3
(EJ002154) 1091120922087 Global-Ocean-Sampling_GS-26-01-01-1... 38 7.7 2
(FE784147) CCAG13648.b3 CCAG Petrolisthes cinctipes heart, g... 38 8.2 2
(CJ477111) Macaca fascicularis mRNA, clone: QtrA-11890, 5' e... 36 8.3 3
(FE781684) CCAG12207.g1 CCAG Petrolisthes cinctipes heart, g... 38 8.4 2
(FE779045) CCAG10534.g1 CCAG Petrolisthes cinctipes heart, g... 38 8.4 2
(BH701153) BOHSS07TR BO_2_3_KB Brassica oleracea genomic clo... 44 8.4 2
(DC242914) Petunia x hybrida cDNA, clone: PET04SEQ06607D. 40 8.4 2
(FE817104) CCAG33273.g1 CCAG Petrolisthes cinctipes heart, g... 38 8.4 2
(FE787222) CCAG15404.b7 CCAG Petrolisthes cinctipes heart, g... 38 8.5 2
(BJ364137) Dictyostelium discoideum cDNA clone:ddc30l05, 5' ... 40 8.5 2
(ER368457) 1093022152338 Global-Ocean-Sampling_GS-34-01-01-1... 38 8.5 2
(CJ437256) Macaca fascicularis mRNA, clone: QccE-14413, 5' e... 44 8.6 2
(EF638444) Nephilengys cruentata flagelliform spidroin-like ... 36 8.8 2
(CJ452493) Macaca fascicularis mRNA, clone: QflA-18151, 5' e... 34 8.8 3
(AC136723) Mus musculus clone RP23-60O24, LOW-PASS SEQUENCE ... 38 8.9 2
(CJ439660) Macaca fascicularis mRNA, clone: QccE-16939, 5' e... 44 8.9 2
(BJ325615) Dictyostelium discoideum cDNA clone:dda1k17, 5' e... 34 9.0 3
(CJ451006) Macaca fascicularis mRNA, clone: QflA-16592, 5' e... 36 9.0 2
(CJ488850) Macaca fascicularis mRNA, clone: QtsA-16575, 5' e... 40 9.0 2
(AC024517) Homo sapiens chromosome 1 clone RP11-168B8 map 1,... 38 9.1 6
(CJ489763) Macaca fascicularis mRNA, clone: QtsA-17528, 5' e... 36 9.3 2
(AY875690) Microplitis demolitor bracovirus segment L, compl... 38 9.4 2
(FH916690) CHO_ONF009xk12f1.ab1 CHO_ONF Nicotiana tabacum ge... 44 9.5 2
(ER539420) 1093016003867 Global-Ocean-Sampling_GS-35-01-01-1... 32 9.6 3
(FD801764) CBGX550.fwd CBGX Volvox carteri f. nagariensis in... 38 9.6 2
(AC022758) Homo sapiens clone RP11-273I11, WORKING DRAFT SEQ... 34 9.7 2
(AL589844) Human DNA sequence from clone RP11-436F21 on chro... 34 9.7 2
(EK297798) 1095462353659 Global-Ocean-Sampling_GS-31-01-01-1... 38 9.8 2
(AC154071) Macropus eugenii clone ME_KBa-273F23, WORKING DRA... 32 9.8 2
(AC186086) Muntiacus muntjak vaginalis clone CH244-80N18, WO... 34 9.9 5
(EY873020) CL06-C4-501-004-G11-CT.F Rangpur lime root, plant... 44 9.9 2

>(BJ326538) Dictyostelium discoideum cDNA clone:dda16j21, 5' end,
single read.
Length = 644

Score = 1156 bits (583), Expect(2) = 0.0
Identities = 586/587 (99%)
Strand = Plus / Plus


Query: 1 cactgttggcctactggaaacataacccaaaaataaatatataataaaatgacaactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactgttggcctactggaaacataacccaaaaataaatatataataaaatgacaactcaa 60


Query: 61 atctatcaggttccagttgtcagtaatggtcttagagaaactgaatctattcttcaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctatcaggttccagttgtcagtaatggtcttagagaaactgaatctattcttcaaatt 120


Query: 121 gtagattcacttgaaaaacttgaaaaggtttttaatgatatgtattcaacaatttctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagattcacttgaaaaacttgaaaaggtttttaatgatatgtattcaacaatttctgca 180


Query: 181 agagtatcacatgaaaaatcaagaattgataatgttgcaaatagattaaataatgcacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagtatcacatgaaaaatcaagaattgataatgttgcaaatagattaaataatgcacaa 240


Query: 241 cataaagttaatcaaattgttggtagtaaacaagcaataacagtatttagtagtgcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cataaagttaatcaaattgttggtagtaaacaagcaataacagtatttagtagtgcaaaa 300


Query: 301 tatccagcagataagaaatggggagattatgtaccaatttatagtggaaaacataaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatccagcagataagaaatggggagattatgtaccaatttatagtggaaaacataaatta 360


Query: 361 ccatttaaaccatcacattatcatggattgaatagtgaagatagtccaattaaaaagaga 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttttaaaccatcacattatcatggattgaatagtgaagatagtccaattaaaaagaga 420


Query: 421 ccagaggattcatatttggatgtaaatgatttagttttcattgaaaagagtattgatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccagaggattcatatttggatgtaaatgatttagttttcattgaaaagagtattgatacc 480


Query: 481 acatcgaaagaagtggaggttaaggaaggtcttggtagaattccagcacagattccaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acatcgaaagaagtggaggttaaggaaggtcttggtagaattccagcacagattccaagt 540


Query: 541 gtttcaaatcttttattatttaatactcaagagaatccatacaaaaa 587
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtttcaaatcttttattatttaatactcaagagaatccatacaaaaa 587

Score = 123 bits (62), Expect(2) = 0.0
Identities = 62/62 (100%)
Strand = Plus / Plus


Query: 584 aaaaagtattcaaatacattggacaatttatcaggtggtgatggtggtgaagatgactac 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aaaaagtattcaaatacattggacaatttatcaggtggtgatggtggtgaagatgactac 642


Query: 644 ac 645
||
Sbjct: 643 ac 644

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,225,425,276
Number of extensions: 143620761
Number of successful extensions: 13074625
Number of sequences better than 10.0: 293
Length of query: 2109
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 2085
Effective length of database: 96,409,374,237
Effective search space: 201013545284145
Effective search space used: 201013545284145
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15594-1 (Contig-U15594-1Q) /CSM_Contig/Contig-U15594-1Q.Seq.d
(2109 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC166761_1(BC166761|pid:none) Rattus norvegicus WAS protein fami... 117 3e-30
BC153261_1(BC153261|pid:none) Bos taurus similar to Family with ... 124 2e-26
(A8K0Z3) RecName: Full=WAS protein family homolog 1; AltName: Fu... 121 9e-26
BC048328_1(BC048328|pid:none) Homo sapiens WAS protein family ho... 121 9e-26
BC134941_1(BC134941|pid:none) Danio rerio WAS protein family hom... 117 1e-24
AJ304796_1(AJ304796|pid:none) Mus musculus mRNA for hypothetical... 117 2e-24
BC085201_1(BC085201|pid:none) Xenopus laevis hypothetical LOC495... 117 2e-24
BC123023_1(BC123023|pid:none) Xenopus tropicalis hypothetical pr... 115 5e-24
AK154400_1(AK154400|pid:none) Mus musculus NOD-derived CD11c +ve... 114 2e-23
BX537637_1(BX537637|pid:none) Homo sapiens mRNA; cDNA DKFZp686C2... 112 5e-23
(A8MWX3) RecName: Full=Putative WAS protein family homolog 4; Al... 87 3e-15
EU240546_1(EU240546|pid:none) Homo sapiens actin nucleation prom... 84 3e-14
EU240555_1(EU240555|pid:none) Homo sapiens actin nucleation prom... 84 3e-14
EU240547_1(EU240547|pid:none) Homo sapiens actin nucleation prom... 83 3e-14
EU240556_1(EU240556|pid:none) Homo sapiens actin nucleation prom... 83 5e-14
EU240553_1(EU240553|pid:none) Homo sapiens actin nucleation prom... 82 1e-13
EU240551_1(EU240551|pid:none) Homo sapiens actin nucleation prom... 82 1e-13
T46417(T46417)hypothetical protein DKFZp434K1323.1 - human (frag... 81 1e-13
EU240548_1(EU240548|pid:none) Homo sapiens actin nucleation prom... 80 2e-13
AE013599_1474(AE013599|pid:none) Drosophila melanogaster chromos... 80 3e-13
CP001425_40(CP001425|pid:none) Borrelia burgdorferi 64b plasmid ... 47 0.003
CP001436_12(CP001436|pid:none) Borrelia valaisiana VS116 plasmid... 47 0.004
BC100279_1(BC100279|pid:none) Homo sapiens WAS protein family ho... 44 0.018
BC101888_1(BC101888|pid:none) Rattus norvegicus WAS protein fami... 40 0.44
FN357492_6(FN357492|pid:none) Schistosoma mansoni genome sequenc... 38 1.7
CP001344_1988(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 37 2.2
FJ467296_1(FJ467296|pid:none) Setaria italica NBS-LRR disease re... 34 2.8
AE017308_97(AE017308|pid:none) Mycoplasma mobile 163K complete g... 37 2.9
CP000473_5247(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 37 3.7
(Q55AX0) RecName: Full=Dynamin-like protein C; EC=3.6.5... 36 6.4
CP000504_74(CP000504|pid:none) Pyrobaculum islandicum DSM 4184, ... 36 6.4
AY815496_1(AY815496|pid:none) Schistosoma japonicum SJCHGC02220 ... 36 6.4
AC116982_36(AC116982|pid:none) Dictyostelium discoideum chromoso... 36 6.4

>BC166761_1(BC166761|pid:none) Rattus norvegicus WAS protein family
homolog 2, mRNA (cDNA clone MGC:188513 IMAGE:7930951),
complete cds.
Length = 475

Score = 117 bits (292), Expect(2) = 3e-30
Identities = 66/182 (36%), Positives = 105/182 (57%)
Frame = +1

Query: 43 NKMTTQIYQVPVVSNGLRETESILQIVDSLEKLEKVFNDMYSTISARVSHEKSRIDNVAN 222
+ + Q+Y VP++ LR E+I Q+ D+L+ L+ + D++S IS RV + ++ +
Sbjct: 8 HSLAGQVYAVPLIQPDLRREEAIQQVADALQYLQNISGDIFSRISQRVELSRRQLQAIGE 67

Query: 223 RLNNAQHKVNQIVGSKQAITVFSSAKYPADKKWGDYVPIYSGKHKLPFKPSHYHGLNSED 402
R++ AQ K+ +I GSK+AI VFSSAKYPA + +Y +++G + + + S+
Sbjct: 68 RVSLAQAKIEKIKGSKKAIKVFSSAKYPAPEHLQEYNSVFTGALDPGLQRRPRYRIQSKH 127

Query: 403 SPIKKRPEDSYLDVNDLVFIEKSIDTTSKEVEVKEGLGRIPAQIPSVSNLLLFNTQENPY 582
P+ +R L + KS E E +EGLG +P+ I S+S+LLLFNT EN Y
Sbjct: 128 RPLDERALQEKLKYFPVCVSTKS----EPEDEAEEGLGGLPSNISSISSLLLFNTTENLY 183

Query: 583 KK 588
KK
Sbjct: 184 KK 185

Score = 40.4 bits (93), Expect(2) = 3e-30
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +2

Query: 584 KKYSNTLDNLSGGDGGEDDYTIFGDQLSKKKRLGDAPVTVKDGDSRIDAENVKIGYEPGT 763
KKY LD L+G +T+ G +++++L DAP+++ + Y PG
Sbjct: 184 KKYV-FLDPLAGAV--TKTHTMLG---TEEEKLFDAPLSISKREQLEQPAPENYFYVPGL 237

Query: 764 FEIPVYNFPSILP-LPNVAENITWAAE-SQSIAPSQKATLNLLPTY 895
++P + PS LP LP VA+++ ++A+ IAPS + LP +
Sbjct: 238 GQVPEIDVPSYLPDLPGVADDLMYSADLGPGIAPSAPGAIPELPAF 283

Score = 37.4 bits (85), Expect = 2.2
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3

Query: 1236 DAPVTVKDGDSRIDAENVKIGYEPGTFEIPVYNFPSILP-LPNVAENITWAAE-SQSIAP 1409
DAP+++ + Y PG ++P + PS LP LP VA+++ ++A+ IAP
Sbjct: 212 DAPLSISKREQLEQPAPENYFYVPGLGQVPEIDVPSYLPDLPGVADDLMYSADLGPGIAP 271

Query: 1410 SQKATLNLLPTY 1445
S + LP +
Sbjct: 272 SAPGAIPELPAF 283

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,516,247,645
Number of extensions: 43668651
Number of successful extensions: 130114
Number of sequences better than 10.0: 33
Number of HSP's gapped: 130043
Number of HSP's successfully gapped: 37
Length of query: 703
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 567
Effective length of database: 611,008,840
Effective search space: 346442012280
Effective search space used: 346442012280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.38 alm: 0.50 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.05
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
32.0 %: nuclear
12.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: peroxisomal

>> prediction for Contig-U15594-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 4
AH (FL, L) 0
AF (FL, S) 3
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 1