>Contig-U15582-1 (Contig-U15582-1Q) /CSM_Contig/Contig-U15582-1Q.Seq.d
TCTGTTGACCCTGGTTCGTTTCCAGGTCGCGGCACCAAATAATTTTCTCA
CAAAATTTTATTTCTCATTATTTAATGAGAAAATAAATAAATTATCAAAT
GACAACACCAAGAGTACCAACAACATTTACAAGAAAAGTAGCAGGTGGAG
TTAAAACTACAACAACAGGATCATCATTACCAACAAATAATACATCAACA
ACAACAACAACAACAACAACAGCAGCAAAGAAATTACCAAATGGATGTAA
AATTTCAATTAAAAATTCAAATTTATTAACATCAACAGGTTTAACAGATT
TAGATGATATTATTGGTGGTGGTATACCAATTGGTAGTATATTAATGATT
GAAGAAGATATAAATAGTAGTTATTATATGTTTTTATTAAAGTATTTCCT
TGCAGAAGGTGTACTTCAACAACAGGGTGTATTCTTTTCATCTTTAATTG
GTATTGATCCATTTGAAATTTTAAATAAATTACCTGCAAGAATTACAAAA
GAAGAAGAAATTGAAGCTGATAAAAATGATACTACAAATAATATAAATAC
AAATATAAATACAAATAACAATAATAAACAACCAACAGATGAATTAAAAA
TTGCATGGAGATATCAACAATATGTTTCAAATGAGTTATCAAAACAACAA
CAACAGCAATCAGCATCAACAATAATGAATCAAACATTTTGTCATAGTTA
TGATTTTACAAGAAAGATGAATGTTCAATCAATGAATCCTGAATTGATTC
ATACATTATCACATGATGCACAATCACAGGCAGAAGGCACATCACCATAT
AGAAATTTATTTTTAGAGATTCAAAATTTAGTTTACAAATATAATAAAGA
GGCAGCAATGAACCCTGACCAAACTAGAGTATTACGTTTATGCATTCAAT
CATTCTCTTCACCACTTTGGTCCAACGATGAAGAGGGAGTCATAGAGTTT
TTACATGCATTAAAGGGTTTGTTACGTTCATCAGTTGCAACTTGCGTTAT
ATCAGTTCCAACCTATATCTATAGTGGTGCCTTTGTTAAAAAGATCGCTC
ATTTATGCGATACCGTGGTCTCAATTAACTCTTTTAGTGGTTTAGGTGGT
GAAACACCTGAACAATTCGCAGAGTATCTTGGTCTTTTCAATATCCGTAA
GATTGCCCGTTTAAATACTTTATCATTATCATTTCATCCCGATATGTTAA
CTTTTGTATTCAAAATGAAAAGAAGAAAGATGTGTATCGAAACAATTCAT
TTACCACCCGAATCTTCACGTGCTGGTGATTCAAAACCTGATAATAATGA
CTCAAATAAAAATAAATCCGATCAAAATAATATTGTTTCAAAAATGAAAT
CTGGAAGTGGTTTATTATGTGGTGGAGGTGGTGGTGGTTCTAGTAATAAC
AATCCTTTAGATTTTTAACAAAATAAAAAAAAAAAAAATAAAAAAAAAAA
AAAATAAAAAACATTAAAACATTTTTTTTTTTTTAAGAAAAAAAAAAAAA
AAAAA----------ATNNNTTTNCCCCCCCAANTTNNCCGGGGGGGGNN
TNCAAANCCCNTAAAAAAAACCCCCAAAAAAAAAAAACCCCCCCCNAAAA
AANTNTTTTNNAAAAAAAAA

est1=VFN890F,1,571
est2=AFI194F,22,680
est3=CHA872F,23,677
est4=VFN792F,32,607
est5=AFF385F,35,953
est6=VFC532F,38,549
est7=CFG503F,40,550
est8=SLG878F,42,545
est9=CFJ414F,49,705
est10=AFI162Z,743,990
est11=SLG878Z,950,1505
est12=AFF385Z,1506,1610

c*pwfvsrsrhqiifsqnfishylmrk*inyqmttprvpttftrkvaggvkttttgsslp
tnntsttttttttaakklpngckisiknsnlltstgltdlddiigggipigsilmieedi
nssyymfllkyflaegvlqqqgvffssligidpfeilnklparitkeeeieadkndttnn
intnintnnnnkqptdelkiawryqqyvsnelskqqqqqsastimnqtfchsydftrkmn
vqsmnpelihtlshdaqsqaegtspyrnlfleiqnlvykynkeaamnpdqtrvlrlciqs
fssplwsndeegvieflhalkgllrssvatcvisvptyiysgafvkkiahlcdtvvsins
fsglggetpeqfaeylglfnirkiarlntlslsfhpdmltfvfkmkrrkmcietihlppe
ssragdskpdnndsnknksdqnnivskmksgsgllcggggggssnnnpldf*qnkkkknk
kkkk*KTLKHFFFFKKKKKKK---

---XXXPPQXXRGGXXXPXKKTPKKKKPPPKKXFXKKK

Frame A:
svdpgsfpgrgtk*fshkilflii**enk*iik*qhqeyqqhlqek*qvelklqqqdhhy
qqiihqqqqqqqqqqqrnyqmdvkfqlkiqiy*hqqv*qi*millvvvyqlvvy**lkki
*ivviicfy*sislqkvyfnnrvysfhl*lvlihlkf*inylqelqkkkklklikmilqi
i*iqi*iqitiinnqqmn*klhgdinnmfqmsyqnnnnsnqhqq**ikhfvivmilqer*
mfnq*iln*fihyhmmhnhrqkahhhieiyf*rfki*ftniikrqq*tltkleyyvyafn
hslhhfgptmkres*sfymh*rvcyvhqlqlalyqfqpisivvpllkrsliyaipwsqlt
llvv*vvkhlnnsqsilvfsisvrlpv*ilyhyhfipic*llysk*keercvskqfiyhp
nlhvlviqnliimtqikinpikiilfqk*nlevvyyvvevvvvlvitil*ifnkikkkki
kkkknkkh*niffflrkkkkk---

---XXXPPQXXRGGXXXPXKKTPKKKKPPPKKXFXKKK

Frame B:
lltlvrfqvaapnnfltkfyfslfnekinklsndntkstnniykkssrws*nynnriiit
nk*yinnnnnnnnsskeitkwm*nfn*kfkfininrfnrfr*yywwwytnw*yind*rry
k**llyvfikvfpcrrctsttgcilfifnwy*si*nfk*itcknykrrrn*s**k*yyk*
ykykykyk*q**ttnr*ikncmeisticfk*vikttttaisinnnesnils*l*fykkde
csines*idsyiit*ctitgrrhiti*kfifrdskfslqi**rgsnep*pn*sitfmhsi
ilfttlvqr*rgshrvftcikgfvtfiscnlryissnlyl*wclc*kdrsfmryrgln*l
f*wfrw*nt*tirrvswsfqyp*dcpfkyfiiiissryvnfciqnekkkdvyrnnsfttr
iftcw*fkt****lk*k*irsk*ycfkneiwkwfimwwrwwwf***qsfrfltk*kkkk*
kkkkikniktffff*ekkkkk---

---xxxppxxxgggxqxp*kkppkkknppxkxxfxkk

Frame C:
c*pwfvsrsrhqiifsqnfishylmrk*inyqmttprvpttftrkvaggvkttttgsslp
tnntsttttttttaakklpngckisiknsnlltstgltdlddiigggipigsilmieedi
nssyymfllkyflaegvlqqqgvffssligidpfeilnklparitkeeeieadkndttnn
intnintnnnnkqptdelkiawryqqyvsnelskqqqqqsastimnqtfchsydftrkmn
vqsmnpelihtlshdaqsqaegtspyrnlfleiqnlvykynkeaamnpdqtrvlrlciqs
fssplwsndeegvieflhalkgllrssvatcvisvptyiysgafvkkiahlcdtvvsins
fsglggetpeqfaeylglfnirkiarlntlslsfhpdmltfvfkmkrrkmcietihlppe
ssragdskpdnndsnknksdqnnivskmksgsgllcggggggssnnnpldf*qnkkkknk
kkkk*KTLKHFFFFKKKKKKK---

---xfxppxxpggxxkxxkknpqkkktppxkxxxxkk

Query= Contig-U15582-1 (Contig-U15582-1Q)
/CSM_Contig/Contig-U15582-1Q.Seq.d
         (1620 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15582-1 (Contig-U15582-1Q) /CSM_Contig/Conti...  1622  0.0
Contig-U15820-1 (Contig-U15820-1Q) /CSM_Contig/Conti...    84  8e-16
Contig-U15728-1 (Contig-U15728-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U11043-1 (Contig-U11043-1Q) /CSM_Contig/Conti...    44  7e-04
Contig-U15030-1 (Contig-U15030-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U10631-1 (Contig-U10631-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U04643-1 (Contig-U04643-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U16098-1 (Contig-U16098-1Q) /CSM_Contig/Conti...    40  0.011
Contig-U16040-1 (Contig-U16040-1Q) /CSM_Contig/Conti...    40  0.011
Contig-U15351-1 (Contig-U15351-1Q) /CSM_Contig/Conti...    40  0.011

>Contig-U15582-1 (Contig-U15582-1Q) /CSM_Contig/Contig-U15582-1Q.Seq.d
          Length = 1620

 Score = 1622 bits (818), Expect = 0.0
 Identities = 818/818 (100%)
 Strand = Plus / Plus

                                                                        
Query: 602  tgcatggagatatcaacaatatgtttcaaatgagttatcaaaacaacaacaacagcaatc 661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  tgcatggagatatcaacaatatgtttcaaatgagttatcaaaacaacaacaacagcaatc 661

                                                                        
Query: 662  agcatcaacaataatgaatcaaacattttgtcatagttatgattttacaagaaagatgaa 721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662  agcatcaacaataatgaatcaaacattttgtcatagttatgattttacaagaaagatgaa 721

                                                                        
Query: 722  tgttcaatcaatgaatcctgaattgattcatacattatcacatgatgcacaatcacaggc 781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722  tgttcaatcaatgaatcctgaattgattcatacattatcacatgatgcacaatcacaggc 781

                                                                        
Query: 782  agaaggcacatcaccatatagaaatttatttttagagattcaaaatttagtttacaaata 841
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782  agaaggcacatcaccatatagaaatttatttttagagattcaaaatttagtttacaaata 841

                                                                        
Query: 842  taataaagaggcagcaatgaaccctgaccaaactagagtattacgtttatgcattcaatc 901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842  taataaagaggcagcaatgaaccctgaccaaactagagtattacgtttatgcattcaatc 901

                                                                        
Query: 902  attctcttcaccactttggtccaacgatgaagagggagtcatagagtttttacatgcatt 961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  attctcttcaccactttggtccaacgatgaagagggagtcatagagtttttacatgcatt 961

                                                                        
Query: 962  aaagggtttgttacgttcatcagttgcaacttgcgttatatcagttccaacctatatcta 1021
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962  aaagggtttgttacgttcatcagttgcaacttgcgttatatcagttccaacctatatcta 1021

                                                                        
Query: 1022 tagtggtgcctttgttaaaaagatcgctcatttatgcgataccgtggtctcaattaactc 1081
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 tagtggtgcctttgttaaaaagatcgctcatttatgcgataccgtggtctcaattaactc 1081

                                                                        
Query: 1082 ttttagtggtttaggtggtgaaacacctgaacaattcgcagagtatcttggtcttttcaa 1141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ttttagtggtttaggtggtgaaacacctgaacaattcgcagagtatcttggtcttttcaa 1141

                                                                        
Query: 1142 tatccgtaagattgcccgtttaaatactttatcattatcatttcatcccgatatgttaac 1201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 tatccgtaagattgcccgtttaaatactttatcattatcatttcatcccgatatgttaac 1201

                                                                        
Query: 1202 ttttgtattcaaaatgaaaagaagaaagatgtgtatcgaaacaattcatttaccacccga 1261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 ttttgtattcaaaatgaaaagaagaaagatgtgtatcgaaacaattcatttaccacccga 1261

                                                                        
Query: 1262 atcttcacgtgctggtgattcaaaacctgataataatgactcaaataaaaataaatccga 1321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 atcttcacgtgctggtgattcaaaacctgataataatgactcaaataaaaataaatccga 1321

                                                                        
Query: 1322 tcaaaataatattgtttcaaaaatgaaatctggaagtggtttattatgtggtggaggtgg 1381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 tcaaaataatattgtttcaaaaatgaaatctggaagtggtttattatgtggtggaggtgg 1381

                                                  
Query: 1382 tggtggttctagtaataacaatcctttagatttttaac 1419
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 tggtggttctagtaataacaatcctttagatttttaac 1419


 Score =  591 bits (298), Expect = e-168
 Identities = 298/298 (100%)
 Strand = Plus / Plus

                                                                       
Query: 222 gcagcaaagaaattaccaaatggatgtaaaatttcaattaaaaattcaaatttattaaca 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gcagcaaagaaattaccaaatggatgtaaaatttcaattaaaaattcaaatttattaaca 281

                                                                       
Query: 282 tcaacaggtttaacagatttagatgatattattggtggtggtataccaattggtagtata 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tcaacaggtttaacagatttagatgatattattggtggtggtataccaattggtagtata 341

                                                                       
Query: 342 ttaatgattgaagaagatataaatagtagttattatatgtttttattaaagtatttcctt 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttaatgattgaagaagatataaatagtagttattatatgtttttattaaagtatttcctt 401

                                                                       
Query: 402 gcagaaggtgtacttcaacaacagggtgtattcttttcatctttaattggtattgatcca 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcagaaggtgtacttcaacaacagggtgtattcttttcatctttaattggtattgatcca 461

                                                                     
Query: 462 tttgaaattttaaataaattacctgcaagaattacaaaagaagaagaaattgaagctg 519
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tttgaaattttaaataaattacctgcaagaattacaaaagaagaagaaattgaagctg 519


 Score =  387 bits (195), Expect = e-107
 Identities = 195/195 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgttgaccctggttcgtttccaggtcgcggcaccaaataattttctcacaaaatttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tctgttgaccctggttcgtttccaggtcgcggcaccaaataattttctcacaaaatttta 60

                                                                       
Query: 61  tttctcattatttaatgagaaaataaataaattatcaaatgacaacaccaagagtaccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttctcattatttaatgagaaaataaataaattatcaaatgacaacaccaagagtaccaa 120

                                                                       
Query: 121 caacatttacaagaaaagtagcaggtggagttaaaactacaacaacaggatcatcattac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacatttacaagaaaagtagcaggtggagttaaaactacaacaacaggatcatcattac 180

                          
Query: 181 caacaaataatacat 195
           |||||||||||||||
Sbjct: 181 caacaaataatacat 195


 Score = 32.2 bits (16), Expect = 2.6
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 643 aacaacaacaacagca 658
           ||||||||||||||||
Sbjct: 209 aacaacaacaacagca 224


>Contig-U15820-1 (Contig-U15820-1Q) /CSM_Contig/Contig-U15820-1Q.Seq.d
          Length = 1447

 Score = 83.8 bits (42), Expect = 8e-16
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                         
Query: 1   tctgttgaccctggttcgtttccaggtcgcggcaccaaataatttt 46
           ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 249 tctgttgaccctggttcgtttccaggtcgcggcaccaaacaatttt 294


>Contig-U15728-1 (Contig-U15728-1Q) /CSM_Contig/Contig-U15728-1Q.Seq.d
          Length = 2152

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1366 tatgtggtggaggtggtggtgg 1387
            ||||||||||||||||||||||
Sbjct: 1577 tatgtggtggaggtggtggtgg 1556


 Score = 34.2 bits (17), Expect = 0.65
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 643  aacaacaacaacagcaa 659
            |||||||||||||||||
Sbjct: 1953 aacaacaacaacagcaa 1969


 Score = 34.2 bits (17), Expect = 0.65
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 643  aacaacaacaacagcaa 659
            |||||||||||||||||
Sbjct: 1866 aacaacaacaacagcaa 1882


 Score = 34.2 bits (17), Expect = 0.65
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 643  aacaacaacaacagcaa 659
            |||||||||||||||||
Sbjct: 1851 aacaacaacaacagcaa 1867


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 56,443
Number of Sequences: 8402
Number of extensions: 56443
Number of successful extensions: 13770
Number of sequences better than 10.0: 519
length of query: 1620
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1604
effective length of database: 7,941,110
effective search space: 12737540440
effective search space used: 12737540440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

Query= Contig-U15582-1 (Contig-U15582-1Q) /CSM_Contig/Contig-U15582-1Q.Seq.d
         (1620 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ361873) Dictyostelium discoideum cDNA clone:ddc19l04, 5' ...   545   0.0    3
(BJ326755) Dictyostelium discoideum cDNA clone:dda17k23, 5' ...   545   0.0    3
(BJ362839) Dictyostelium discoideum cDNA clone:ddc23p18, 5' ...   545   0.0    3
(BJ417785) Dictyostelium discoideum cDNA clone:ddv28d24, 5' ...   545   0.0    2
(BJ323704) Dictyostelium discoideum cDNA clone:dda11j21, 5' ...   545   0.0    3
(AU039976) Dictyostelium discoideum slug cDNA, clone SLG878.      656   0.0    2
(BJ411953) Dictyostelium discoideum cDNA clone:ddv6o07, 5' e...   545   0.0    2
(BJ417799) Dictyostelium discoideum cDNA clone:ddv28h23, 5' ...   545   0.0    2
(AU061985) Dictyostelium discoideum slug cDNA, clone SLG878.      545   0.0    2
(BJ359360) Dictyostelium discoideum cDNA clone:ddc14e01, 5' ...   525   0.0    2
(BJ343926) Dictyostelium discoideum cDNA clone:dda17k15, 3' ...   492   e-134  1
(BJ391134) Dictyostelium discoideum cDNA clone:dds15p04, 5' ...    84   2e-11  1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    62   2e-09  13
(BJ386748) Dictyostelium discoideum cDNA clone:dds10a16, 5' ...    74   9e-09  2
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    62   7e-05  1
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    62   7e-05  1
(AC116100) Dictyostelium discoideum chromosome 2 map 6163571...    62   7e-05  1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    44   0.001  12
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    38   0.008  10
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    36   0.012  11
(AC189251) Brassica rapa subsp. pekinensis clone KBrB019I24,...    36   0.014  6
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    36   0.024  19
(AC127804) Rattus norvegicus clone CH230-254D17, *** SEQUENC...    50   0.063  4
(CU633224) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    52   0.067  1
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    46   0.091  10
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    40   0.11   12
(AL844509) Plasmodium falciparum chromosome 13.                    38   0.15   17
(EU016597) Uncultured Group I marine crenarchaea HF4000ANIW1...    36   0.15   6
(AY387646) Dictyostelium discoideum Phg1B (phg1b) gene, comp...    40   0.15   5
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    34   0.19   18
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    36   0.20   10
(AC096149) Rattus norvegicus clone CH230-10H16, *** SEQUENCI...    50   0.26   1
(AC170489) Bos taurus clone CH240-225J10, WORKING DRAFT SEQU...    50   0.26   1
(CW721067) MARC_1130440 CHORI-240-225J10 Bos taurus genomic ...    50   0.26   1
(DR143463) 49111430 Drosophila pseudoobscura embryonic cDNA ...    50   0.26   1
(BF917269) IL3-UT0115-181200-389-G09 UT0115 Homo sapiens cDN...    50   0.26   1
(DT762696) EST1196545 Aquilegia cDNA library Aquilegia formo...    36   0.28   3
(DT766291) EST1200140 Aquilegia cDNA library Aquilegia formo...    36   0.29   3
(DT729293) EST1163143 Aquilegia cDNA library Aquilegia formo...    36   0.30   3
(DT739221) EST1173070 Aquilegia cDNA library Aquilegia formo...    36   0.31   3
(DT742224) EST1176073 Aquilegia cDNA library Aquilegia formo...    36   0.31   3
(DR929134) EST1120673 Aquilegia cDNA library Aquilegia formo...    36   0.36   3
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    32   0.37   11
(AM632930) Entamoeba dispar GSS, clone dispar96a05.q1k.            38   0.38   2
(AM720855) Cucumis melo subsp. melo EST, clone PSI_13-B08-M13R.    46   0.40   2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    34   0.43   13
(AC116921) Dictyostelium discoideum chromosome 2 map 4624505...    34   0.44   6
(AC122423) Mus musculus BAC clone RP24-171N18 from 7, comple...    42   0.45   6
(EK104422) 1092963038930 Global-Ocean-Sampling_GS-31-01-01-1...    34   0.56   4
(DE219792) Trifolium pratense DNA, clone:RCG10761.                 40   0.62   2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    34   0.62   10
(FG071521) UI-FF-IF0-aak-l-01-0-UI.r1 Ceratitis capitata emb...    34   0.74   2
(AF245277) Dictyostelium discoideum kinesin Unc104/KIF1a hom...    34   0.75   4
(BE963580) 601657381R1 NIH_MGC_67 Homo sapiens cDNA clone IM...    46   0.77   2
(CU468508) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.78   6
(BI744702) rk91c11.y1 Meloidogyne javanica egg pAMP1 v6 Chia...    46   0.87   2
(AC161203) Mus musculus chromosome 18 clone RP23-108M5 map 1...    40   0.99   9
(AC177719) Strongylocentrotus purpuratus clone R3-1011A6, WO...    46   1.0    4
(AL672266) Mouse DNA sequence from clone RP23-342A10 on chro...    48   1.0    1
(AP008216) Oryza sativa (japonica cultivar-group) genomic DN...    48   1.0    1
(AC027657) Oryza sativa Japonica Group chromosome 10 clone n...    48   1.0    1
(EU115510) Dictyostelium discoideum Ddi2191 RNA, complete se...    48   1.0    1
(AC224816) Bos taurus clone CH240-475F3, WORKING DRAFT SEQUE...    48   1.0    1
(AC165219) Medicago truncatula chromosome 7 clone mth2-84o7,...    48   1.0    1
(AZ534576) ENTBM76TF Entamoeba histolytica Sheared DNA Entam...    48   1.0    1
(AG987627) Hemicentrotus pulcherrimus BAC clone: BUB1-10J20_...    48   1.0    1
(CZ570434) OB__Ba0008M24.f OB__Ba Oryza brachyantha genomic ...    48   1.0    1
(CL593852) OB__Ba0054G06.r OB__Ba Oryza brachyantha genomic ...    48   1.0    1
(CL588737) OB__Ba0089M22.r OB__Ba Oryza brachyantha genomic ...    48   1.0    1
(CL577093) OB__Ba0028G21.r OB__Ba Oryza brachyantha genomic ...    48   1.0    1
(CL556850) OB__Ba0008K22.f OB__Ba Oryza brachyantha genomic ...    48   1.0    1
(CE795353) tigr-gss-dog-17000317524507 Dog Library Canis lup...    48   1.0    1
(FG502034) 030630KAWC018590HT (KAWC) Actinidia chinensis - a...    48   1.0    1
(AM180355) Clostridium difficile 630 complete genome.              40   1.1    19
(CT459028) Sus scrofa genomic clone CH242-442A12, genomic su...    42   1.1    3
(EX844492) CBNC5415.rev CBNC Phycomyces blakesleeanus NRRL15...    40   1.3    2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    36   1.4    20
(AC164158) Mus musculus BAC clone RP24-263G24 from chromosom...    42   1.4    5
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    36   1.5    14
(AC068681) Homo sapiens chromosome 6 clone RP11-671L8 map 6,...    36   1.5    7
(DL131174) Bax-responsive genes for drug target identificati...    40   1.5    6
(AX537058) Sequence 659 from Patent WO02064766.                    40   1.5    6
(AR941734) Sequence 659 from patent US 7101990.                    40   1.5    6
(DE581634) Bombyx mori genomic DNA, Fosmid clone:GBMFno231_h...    32   1.5    3
(AC163720) Mus musculus BAC clone RP23-424C5 from chromosome...    40   2.0    6
(AC142422) Rattus norvegicus clone CH230-64K9, WORKING DRAFT...    34   2.1    2
(AC179606) Strongylocentrotus purpuratus clone R3-1028P05, W...    38   2.2    7
(AC147484) Medicago truncatula clone mth2-52b4, complete seq...    36   2.2    6
(AC211881) Pongo abelii chromosome UNKNOWN clone CH276-245N2...    46   2.3    4
(CU487208) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   2.3    5
(AC007071) Arabidopsis thaliana chromosome 2 clone T9H9 map ...    38   2.3    5
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    36   2.6    9
(EY370639) CAXA1302.fwd CAXA Helobdella robusta Subtracted L...    32   2.7    2
(FH927982) CHO_NF2002xj03f1.ab1 CHO_NF2 Nicotiana tabacum ge...    34   2.7    2
(ER603434) 1093016259647 Global-Ocean-Sampling_GS-36-01-01-2...    36   2.8    2
(EY390958) CAXA9007.fwd CAXA Helobdella robusta Subtracted L...    34   2.8    2
(CZ821879) OC__Ba0200J18.r OC__Ba Oryza coarctata genomic cl...    34   2.8    2
(CZ782159) OC__Ba0143P11.f OC__Ba Oryza coarctata genomic cl...    34   2.8    2
(AP006852) Candida albicans genomic DNA, chromosome 7, compl...    40   3.0    13
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    34   3.0    13
(BX510311) Zebrafish DNA sequence from clone CH211-235F16.         38   3.2    8
(BX936303) Zebrafish DNA sequence from clone DKEY-105F21 in ...    40   3.2    6
(AC122652) Rattus norvegicus clone CH230-216L13, WORKING DRA...    36   3.2    4
(EJ413908) 1093012168151 Global-Ocean-Sampling_GS-28-01-01-1...    30   3.2    4
(AC140836) Homo sapiens chromosome 5 clone RP11-958L22, WORK...    36   3.2    8
(CR384092) Zebrafish DNA sequence from clone DKEY-43A9 in li...    34   3.3    8
(AC119037) Homo sapiens 3 BAC RP11-495D2 (Roswell Park Cance...    34   3.3    8
(DW579654) EST_ssal_rgb2_44073 rgb2 Salmo salar cDNA clone s...    34   3.4    3
(AC167398) Bos taurus clone CH240-192L12, WORKING DRAFT SEQU...    42   3.4    7
(CP000361) Arcobacter butzleri RM4018, complete genome.            36   3.4    19
(AC125218) Mus musculus BAC clone RP23-67F22 from 18, comple...    40   3.7    7
(DX448263) BE2010_F14_F IASMA L2 HindIII BAC library Vitis v...    36   3.9    2
(CU695114) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   3.9    7
(DY741149) EST_ssal_rgb2_96888 ssalrgb2 mixed_tissue Salmo s...    34   3.9    3
(AL021471) Caenorhabditis elegans YAC Y17D7C.                      44   3.9    4
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    32   4.0    13
(FI201131) CccaBa024-N7TR CccABa Cajanus cajan genomic clone...    44   4.0    2
(AC171970) Mus musculus  BAC RP23-116G8 (Roswell Park Cancer...    46   4.1    1
(AC153985) Mus musculus 6 BAC RP24-507D15 (Roswell Park Canc...    46   4.1    1
(AC153907) Mus musculus  BAC RP23-205F6 (Roswell Park Cancer...    46   4.1    1
(CR954189) Medicago truncatula chromosome 5 clone mte1-73d17...    46   4.1    1
(AP008214) Oryza sativa (japonica cultivar-group) genomic DN...    46   4.1    1
(AP005415) Oryza sativa Japonica Group genomic DNA, chromoso...    46   4.1    1
(AC215438) Solanum lycopersicum chromosome 2 clone C02HBa032...    46   4.1    1
(EA700515) Sequence 79394 from patent US 7365185.                  46   4.1    1
(AL132952) Caenorhabditis elegans YAC Y51H4A.                      46   4.1    1
(AC118977) Rattus norvegicus clone CH230-33N20, WORKING DRAF...    46   4.1    1
(AC098247) Rattus norvegicus clone CH230-1E6, *** SEQUENCING...    46   4.1    1
(CU927942) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   4.1    1
(CU914577) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   4.1    1
(CU633946) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   4.1    1
(CU571150) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   4.1    1
(CU392845) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   4.1    1
(AP004655) Oryza sativa Japonica Group genomic DNA, chromoso...    46   4.1    1
(AC222986) Bos taurus clone CH240-432P4, WORKING DRAFT SEQUE...    46   4.1    1
(AC201249) Strongylocentrotus purpuratus clone R3-15N12, WOR...    46   4.1    1
(AC185020) Bos taurus clone CH240-272H3, WORKING DRAFT SEQUE...    46   4.1    1
(AC179416) Strongylocentrotus purpuratus clone R3-62D24, WOR...    46   4.1    1
(AC177270) Strongylocentrotus purpuratus clone R3-43M15, WOR...    46   4.1    1
(AC176208) Strongylocentrotus purpuratus clone R3-3063I18, W...    46   4.1    1
(ER613423) 1093016327511 Global-Ocean-Sampling_GS-36-01-01-2...    46   4.1    1
(ER606576) 1093016281179 Global-Ocean-Sampling_GS-36-01-01-2...    46   4.1    1
(EK327655) 1095467012716 Global-Ocean-Sampling_GS-31-01-01-1...    46   4.1    1
(EK169624) 1095458069451 Global-Ocean-Sampling_GS-31-01-01-1...    46   4.1    1
(EK159638) 1095458020953 Global-Ocean-Sampling_GS-31-01-01-1...    46   4.1    1
(EK063615) 1092960102278 Global-Ocean-Sampling_GS-31-01-01-1...    46   4.1    1
(EK026399) 1092955368563 Global-Ocean-Sampling_GS-31-01-01-1...    46   4.1    1
(EK005611) 1092955085374 Global-Ocean-Sampling_GS-31-01-01-1...    46   4.1    1
(EJ994779) 1093023079522 Global-Ocean-Sampling_GS-30-02-01-1...    46   4.1    1
(EJ975634) 1093022115235 Global-Ocean-Sampling_GS-30-02-01-1...    46   4.1    1
(EJ761238) 1092963134317 Global-Ocean-Sampling_GS-30-02-01-1...    46   4.1    1
(EJ645808) 1091120948974 Global-Ocean-Sampling_GS-30-01-01-1...    46   4.1    1
(EJ645525) 1091120705710 Global-Ocean-Sampling_GS-30-01-01-1...    46   4.1    1
(EJ550888) 1092959444827 Global-Ocean-Sampling_GS-29-01-01-1...    46   4.1    1
(EJ532056) 1092955236209 Global-Ocean-Sampling_GS-29-01-01-1...    46   4.1    1
(EJ356091) 1092963639677 Global-Ocean-Sampling_GS-28-01-01-1...    46   4.1    1
(DU245880) 1098574254855 CHORI-243 Ovis aries genomic clone ...    46   4.1    1
(DE984782) Macropus eugenii DNA, BAC clone: MEB1-194O03_R, 3...    46   4.1    1
(DE948850) Macropus eugenii DNA, BAC clone: MEB1-146B22_F, 5...    46   4.1    1
(DE455720) Bombyx mori genomic DNA, Fosmid clone:GBMFno49_p2...    46   4.1    1
(CR324176) mte1-51A6RM1 BAC end, cultivar Jemalong A17 of Me...    46   4.1    1
(CE286207) tigr-gss-dog-17000333804923 Dog Library Canis lup...    46   4.1    1
(ES403017) MUT14-I18.x1d-t SHGC-MUT Mytilus californianus cD...    46   4.1    1
(ES400761) MUT13-G15.x1d-t SHGC-MUT Mytilus californianus cD...    46   4.1    1
(DY924529) CHAY7638.b1_L14.ab1 CHA(XYZ) common wild sunflowe...    46   4.1    1
(DY924256) CHAY7386.b1_C23.ab1 CHA(XYZ) common wild sunflowe...    46   4.1    1
(DW267235) UI-S-GN1-abx-c-08-0-UI.s1 UI-S-GN1 Euprymna scolo...    46   4.1    1
(DV149328) CV03079B1B04.f1 CV03-normalized library Euphorbia...    46   4.1    1
(CX721722) 1328881 NCCCWA 09RT Oncorhynchus mykiss cDNA clon...    46   4.1    1
(CA455505) AGENCOURT_10641444 NIH_MGC_141 Homo sapiens cDNA ...    46   4.1    1
(CA348218) 679476 NCCCWA 1RT Oncorhynchus mykiss cDNA clone ...    46   4.1    1
(BX858993) AGENAE Rainbow trout normalized testis library (t...    46   4.1    1
(BF088965) PM4-HT0908-050900-001-c09 HT0908 Homo sapiens cDN...    46   4.1    1
(EY989889) CATH1661.rev CATH Sporobolomyces roseus IAM 13481...    46   4.1    1
(ER392319) 1095333028383 Global-Ocean-Sampling_GS-34-01-01-1...    30   4.1    4
(AM456246) Vitis vinifera contig VV78X083458.8, whole genome...    36   4.2    3
(AC154041) Drosophila melanogaster clone BACR43N11, complete...    40   4.3    4
(AC106157) Rattus norvegicus clone CH230-21K3, WORKING DRAFT...    44   4.4    4
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    40   4.4    10
(AP007369) Lotus japonicus genomic DNA, chromosome 3, clone:...    34   4.5    7
(AC144869) Pan troglodytes clone CH251-287A2, WORKING DRAFT ...    40   4.5    4
(AC145392) Mus musculus BAC clone RP24-171E5 from chromosome...    42   4.6    4
(AM624301) Entamoeba dispar GSS, clone dispar108f06.q1k.           38   4.6    2
(EK235030) 1095460196538 Global-Ocean-Sampling_GS-31-01-01-1...    30   4.7    4
(AC214603) Nomascus leucogenys chromosome UNK clone CH271-53...    42   4.7    6
(EY379511) CAXA17834.fwd CAXA Helobdella robusta Subtracted ...    34   4.8    3
(AC121796) Mus musculus BAC clone RP23-423D22 from chromosom...    40   4.9    7
(EJ233833) 1092404074127 Global-Ocean-Sampling_GS-27-01-01-1...    30   4.9    4
(EW581450) rspl03_p8.y1 spl Sus scrofa cDNA 5', mRNA sequence.     38   4.9    2
(AC158170) Mus musculus BAC clone RP23-261K17 from chromosom...    34   5.0    8
(AC121780) Mus musculus BAC clone RP23-360J14 from chromosom...    40   5.0    8
(EK039102) 1092959497954 Global-Ocean-Sampling_GS-31-01-01-1...    38   5.1    2
(AC120629) Rattus norvegicus clone CH230-314H22, WORKING DRA...    40   5.2    5
(AM630642) Entamoeba dispar GSS, clone dispar57e05.q1k.            38   5.2    2
(EJ970261) 1093022074761 Global-Ocean-Sampling_GS-30-02-01-1...    30   5.3    4
(AM636236) Entamoeba dispar GSS, clone dispar35c10.q1k.            38   5.3    2
(EJ007771) 1095403465435 Global-Ocean-Sampling_GS-26-01-01-1...    30   5.5    4
(AM642987) Entamoeba dispar GSS, clone dispar9e06.p1k.             38   5.5    2
(AM632179) Entamoeba dispar GSS, clone dispar85e07.q1k.            38   5.6    2
(DN806475) 76964622 Sea Urchin primary mesenchyme cell cDNA ...    36   6.0    2
(AM628898) Entamoeba dispar GSS, clone dispar31b03.p1k.            38   6.0    2
(DN807869) 76973146 Sea Urchin primary mesenchyme cell cDNA ...    36   6.0    2
(AY232267) Dictyostelium discoideum putative protein Roco5 (...    42   6.1    3
(CG947840) MBEME30TR mth2 Medicago truncatula genomic clone ...    40   6.1    2
(EJ124329) 1092343387173 Global-Ocean-Sampling_GS-27-01-01-1...    30   6.1    4
(AL096802) Human DNA sequence from clone GS1-13C1 on chromos...    36   6.2    5
(CU856397) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   6.2    8
(EJ133262) 1092343576776 Global-Ocean-Sampling_GS-27-01-01-1...    30   6.2    4
(AC130390) Drosophila melanogaster X BAC RP98-21O19 (Roswell...    38   6.2    8
(EJ218598) 1092351166330 Global-Ocean-Sampling_GS-27-01-01-1...    30   6.2    4
(AZ678331) ENTKL14TF Entamoeba histolytica Sheared DNA Entam...    40   6.3    3
(EY336967) CAWY803.fwd CAWY Helobdella robusta Subtracted Ea...    40   6.3    2
(EK532666) 1095516015099 Global-Ocean-Sampling_GS-32-01-01-1...    40   6.4    2
(AC093879) Homo sapiens BAC clone RP11-650J17 from 4, comple...    36   6.7    7
(DR913141) EST1104680 Aquilegia cDNA library Aquilegia formo...    36   6.8    2
(BH213361) SALK_009113 Arabidopsis thaliana TDNA insertion l...    38   6.8    2
(AF088979) Dictyostelium discoideum beige protein homolog (l...    32   7.1    5
(AC156327) Bos taurus clone CH240-49M13, WORKING DRAFT SEQUE...    34   7.4    2
(AC099368) Rattus norvegicus clone CH230-84G11, WORKING DRAF...    34   7.4    2
(AC093939) Rattus norvegicus clone CH230-172N14, WORKING DRA...    34   7.4    2
(AC096351) Rattus norvegicus clone CH230-24M6, WORKING DRAFT...    34   7.4    2
(AC106650) Rattus norvegicus clone CH230-64I24, WORKING DRAF...    34   7.4    2
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    30   7.5    10
(AC013431) Drosophila melanogaster, chromosome X, region 13E...    32   7.5    2
(CU468093) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   7.5    2
(AC092401) Drosophila melanogaster, chromosome X, region 13E...    32   7.5    2
(AC182696) Populus trichocarpa clone Pop1-69I10, complete se...    36   7.5    6
(AC008336) Drosophila melanogaster strain y chromosome X clo...    32   7.6    2
(AP005568) Oryza sativa Japonica Group genomic DNA, chromoso...    34   7.6    2
(CR848665) Zebrafish DNA sequence from clone CH211-276C2 in ...    32   7.6    2
(AC154198) Mus musculus BAC clone RP24-393P24 from chromosom...    34   7.6    2
(AC171136) Helobdella robusta clone CH306-1A7, complete sequ...    32   7.8    2
(AC179791) Strongylocentrotus purpuratus clone R3-1014L2, WO...    40   8.3    7
(AC080095) Homo sapiens chromosome 2 clone CTD-2542F24, WORK...    38   8.4    6
(AC019935) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    32   8.4    2
(CQ590762) Sequence 18520 from Patent WO0171042.                   32   8.7    2
(AC146865) Medicago truncatula clone mth2-36m14, complete se...    38   8.8    6
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    38   9.3    10
(AC101719) Mus musculus chromosome 7, clone RP23-294K15, com...    42   9.5    5
(CQ590763) Sequence 18521 from Patent WO0171042.                   32   9.5    2
(BT023934) Drosophila melanogaster RE25404 full insert cDNA.       32   9.5    2
(M83787) Drosophila melanogaster scalloped protein mRNA, com...    32   9.6    2
(AC148091) Mus musculus chromosome 18 clone RP23-71E16 map 18.     40   9.6    7
(AY071181) Drosophila melanogaster RE23308 full length cDNA.       32   9.6    2
(L07663) Drosophila melanogaster DNA sequence, exons 7 throu...    32   9.6    2
(BT029128) Drosophila melanogaster IP16090 full insert cDNA.       32   9.6    2
(AC017043) Homo sapiens chromosome 5 clone RP11-321F20, WORK...    40   9.6    5
(AC153828) Mus musculus 6 BAC RP23-119D13 (Roswell Park Canc...    40   9.8    3
(AP004555) Oryza sativa Japonica Group genomic DNA, chromoso...    40   9.9    7
(AC129454) Rattus norvegicus clone CH230-9H18, WORKING DRAFT...    34   10.0   8

>(BJ361873) Dictyostelium discoideum cDNA clone:ddc19l04, 5' end,
           single read.
          Length = 657

 Score =  545 bits (275), Expect(3) = 0.0
 Identities = 275/275 (100%)
 Strand = Plus / Plus


Query: 222 gcagcaaagaaattaccaaatggatgtaaaatttcaattaaaaattcaaatttattaaca 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gcagcaaagaaattaccaaatggatgtaaaatttcaattaaaaattcaaatttattaaca 233


Query: 282 tcaacaggtttaacagatttagatgatattattggtggtggtataccaattggtagtata 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcaacaggtttaacagatttagatgatattattggtggtggtataccaattggtagtata 293


Query: 342 ttaatgattgaagaagatataaatagtagttattatatgtttttattaaagtatttcctt 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttaatgattgaagaagatataaatagtagttattatatgtttttattaaagtatttcctt 353


Query: 402 gcagaaggtgtacttcaacaacagggtgtattcttttcatctttaattggtattgatcca 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gcagaaggtgtacttcaacaacagggtgtattcttttcatctttaattggtattgatcca 413


Query: 462 tttgaaattttaaataaattacctgcaagaattac 496
           |||||||||||||||||||||||||||||||||||
Sbjct: 414 tttgaaattttaaataaattacctgcaagaattac 448

 Score =  208 bits (105), Expect(3) = 0.0
 Identities = 105/105 (100%)
 Strand = Plus / Plus


Query: 50  acaaaattttatttctcattatttaatgagaaaataaataaattatcaaatgacaacacc 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   acaaaattttatttctcattatttaatgagaaaataaataaattatcaaatgacaacacc 61


Query: 110 aagagtaccaacaacatttacaagaaaagtagcaggtggagttaa 154
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  aagagtaccaacaacatttacaagaaaagtagcaggtggagttaa 106

 Score =  206 bits (104), Expect(3) = 0.0
 Identities = 104/104 (100%)
 Strand = Plus / Plus


Query: 602 tgcatggagatatcaacaatatgtttcaaatgagttatcaaaacaacaacaacagcaatc 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgcatggagatatcaacaatatgtttcaaatgagttatcaaaacaacaacaacagcaatc 613


Query: 662 agcatcaacaataatgaatcaaacattttgtcatagttatgatt 705
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agcatcaacaataatgaatcaaacattttgtcatagttatgatt 657

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,632,385,355
Number of extensions: 115271304
Number of successful extensions: 13151052
Number of sequences better than 10.0: 251
Length of query: 1620
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1596
Effective length of database: 96,409,374,237
Effective search space: 153869361282252
Effective search space used: 153869361282252
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U15582-1 (Contig-U15582-1Q) /CSM_Contig/Contig-U15582-1Q.Seq.d
         (1620 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54XS0) RecName: Full=Probable elongator complex protein 4;    ...   641   0.0
(Q5XG58) RecName: Full=Elongator complex protein 4;  &BC084604_1...   142   5e-32
(Q96EB1) RecName: Full=Elongator complex protein 4;          Sho...   137   1e-30
AX119069_1(AX119069|pid:none) Sequence 233 from Patent WO0129221.     137   1e-30
AK034040_1(AK034040|pid:none) Mus musculus adult male diencephal...   135   4e-30
(Q9ER73) RecName: Full=Elongator complex protein 4; AltName: Ful...   135   4e-30
AJ276004_1(AJ276004|pid:none) Mus musculus mRNA for Paxneb prote...   135   4e-30
BC158667_1(BC158667|pid:none) Rattus norvegicus similar to elong...   135   6e-30
AJ414048_2(AJ414048|pid:none) Takifugu rubripes paxneb gene and ...   132   3e-29
BC093280_1(BC093280|pid:none) Danio rerio elongation protein 4 h...   130   1e-28
AK304885_1(AK304885|pid:none) Homo sapiens cDNA FLJ61586 complet...   126   3e-27
DQ311167_1(DQ311167|pid:none) Bombyx mori elongation protein 4-l...   118   5e-25
AK342949_1(AK342949|pid:none) Acyrthosiphon pisum ACYPI002071 mR...   110   1e-22
AL512589_12(AL512589|pid:none) Mouse DNA sequence from clone RP2...   106   2e-21
BX000453_1(BX000453|pid:none) Zebrafish DNA sequence from clone ...    97   1e-18
AP003571_10(AP003571|pid:none) Oryza sativa Japonica Group genom...    84   1e-14
BT034907_1(BT034907|pid:none) Zea mays full-length cDNA clone ZM...    83   3e-14
AM455259_2(AM455259|pid:none) Vitis vinifera contig VV78X229484....    82   6e-14
AJ964957_1(AJ964957|pid:none) Arabidopsis thaliana mRNA for elon...    81   1e-13
AC073395_16(AC073395|pid:none) Arabidopsis thaliana chromosome 3...    80   3e-13
EF085482_1(EF085482|pid:none) Picea sitchensis clone WS02713_G12...    74   2e-11
CU638744_423(CU638744|pid:none) Podospora anserina genomic DNA c...    67   1e-09
AM920436_605(AM920436|pid:none) Penicillium chrysogenum Wisconsi...    64   1e-08
BX897674_1(BX897674|pid:none) Neurospora crassa DNA linkage grou...    61   1e-07
BT034499_1(BT034499|pid:none) Zea mays full-length cDNA clone ZM...    57   1e-06
FN318387_1(FN318387|pid:none) Schistosoma japonicum isolate Anhu...    57   3e-06
(Q60ZM2) RecName: Full=Putative elongator complex protein 4;    ...    54   1e-05
AL590444_82(AL590444|pid:none) chromosome IV of strain GB-M1 of ...    53   4e-05
(Q9USP1) RecName: Full=Elongator complex protein 4;  &AL121783_6...    53   4e-05
AM269955_30(AM269955|pid:none) Aspergillus niger contig An01c008...    51   1e-04
AY814941_1(AY814941|pid:none) Schistosoma japonicum clone SJCHGC...    49   5e-04
(Q18195) RecName: Full=Putative elongator complex protein 4;    ...    49   7e-04
AK020742_1(AK020742|pid:none) Mus musculus adult male spinal cor...    45   0.006
CU928169_568(CU928169|pid:none) Kluyveromyces thermotolerans str...    41   0.14
CR380954_249(CR380954|pid:none) Candida glabrata strain CBS138 c...    39   0.55
CR382125_1058(CR382125|pid:none) Kluyveromyces lactis strain NRR...    39   0.71
AY810487_1(AY810487|pid:none) Schistosoma japonicum clone SJCHGC...    38   0.93
CP000002_2616(CP000002|pid:none) Bacillus licheniformis ATCC 145...    35   6.0
AE017333_2613(AE017333|pid:none) Bacillus licheniformis DSM 13, ...    35   6.0
AC116986_95(AC116986|pid:none) Dictyostelium discoideum chromoso...    35   7.9

>(Q54XS0) RecName: Full=Probable elongator complex protein 4;
            Short=ELP4;
          Length = 439

 Score =  641 bits (1654), Expect = 0.0
 Identities = 340/439 (77%), Positives = 340/439 (77%)
 Frame = +3

Query: 99   MTTPRVPTTFTRKVAGGVKXXXXXXXXXXXXXXXXXXXXXXAAKKLPNGCKISIKNSNXX 278
            MTTPRVPTTFTRKVAGGVK                      AAKKLPNGCKISIKNSN
Sbjct: 1    MTTPRVPTTFTRKVAGGVKTTTTGSSLPTNNTSTTTTTTTTAAKKLPNGCKISIKNSNLL 60

Query: 279  XXXXXXXXXXXXXXXXXXXXXXMIEEDINSSYYMFLLKYFLAEGVLQQQGVFFSSLIGID 458
                                  MIEEDINSSYYMFLLKYFLAEGVLQQQGVFFSSLIGID
Sbjct: 61   TSTGLTDLDDIIGGGIPIGSILMIEEDINSSYYMFLLKYFLAEGVLQQQGVFFSSLIGID 120

Query: 459  PFEILNKLPARITKEEEIEAXXXXXXXXXXXXXXXXXXXXQPTDELKIAWRYQQYVSNEL 638
            PFEILNKLPARITKEEEIEA                    QPTDELKIAWRYQQYVSNEL
Sbjct: 121  PFEILNKLPARITKEEEIEADKNDTTNNINTNINTNNNNKQPTDELKIAWRYQQYVSNEL 180

Query: 639  SKQQQQQSASTIMNQTFCHSYDFTRKMNVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLE 818
            SKQQQQQSASTIMNQTFCHSYDFTRKMNVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLE
Sbjct: 181  SKQQQQQSASTIMNQTFCHSYDFTRKMNVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLE 240

Query: 819  IQNLVYKYNKEAAMNPDQTRVLRLCIQSFSSPLWSNDEEGVIEFLHALKGLLRSSVATCV 998
            IQNLVYKYNKEAAMNPDQTRVLRLCIQSFSSPLWSNDEEGVIEFLHALKGLLRSSVATCV
Sbjct: 241  IQNLVYKYNKEAAMNPDQTRVLRLCIQSFSSPLWSNDEEGVIEFLHALKGLLRSSVATCV 300

Query: 999  ISVPTYIYSGAFVKKIAHLCDTVVSINSFSGLGGETPEQFAEYLGLFNIRKIARLNTLSL 1178
            ISVPTYIYSGAFVKKIAHLCDTVVSINSFSGLGGETPEQFAEYLGLFNIRKIARLNTLSL
Sbjct: 301  ISVPTYIYSGAFVKKIAHLCDTVVSINSFSGLGGETPEQFAEYLGLFNIRKIARLNTLSL 360

Query: 1179 SFHPDMLTFVFKMKRRKMCIETIHLPPESSRAGXXXXXXXXXXXXXXXXXXIVSKMKXXX 1358
            SFHPDMLTFVFKMKRRKMCIETIHLPPESSRAG                  IVSKMK
Sbjct: 361  SFHPDMLTFVFKMKRRKMCIETIHLPPESSRAGDSKPDNNDSNKNKSDQNNIVSKMKSGS 420

Query: 1359 XXXXXXXXXXXXNNNPLDF 1415
                        NNNPLDF
Sbjct: 421  GLLCGGGGGGSSNNNPLDF 439

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,870,485,898
Number of extensions: 32353932
Number of successful extensions: 82900
Number of sequences better than 10.0: 40
Number of HSP's gapped: 82269
Number of HSP's successfully gapped: 41
Length of query: 540
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 406
Effective length of database: 617,481,958
Effective search space: 250697674948
Effective search space used: 250697674948
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.30  gvh: 0.34  alm: 0.79  top: 0.53  tms: 0.00  mit: 0.43  mip: 0.00
 nuc: 0.69  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 76.0 %: nuclear
	 16.0 %: cytoplasmic
	  8.0 %: mitochondrial

>> prediction for Contig-U15582-1 is nuc