Contig-U15581-1
Contig ID Contig-U15581-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15581-1 (Contig-U15581-1Q) /CSM_Contig/Contig-U15581-1Q.Seq.d
ATTATTGTGTTTTTAACACATTAACAACATCCTTCTTTGACTTAAGCTTC
ATCACTTAAGTGTAACGTCAGATGAAACACCAGAATCATATTTCACAGTA
AGGGTGCGATTTCACTATGGCAAAGGATAAAACGATAGGATCGATCGCGA
GCAATTGCAGATCTCCCGTGCAGAATTTCTCAAATTTGGTGTTAACGCTG
GAGAAATCCTAGAATGATATCACCGATACAAACCATTCTCATACATTCAT
TGTCAGTAAGATCTTAGATTTCTATATATATACATTTAACAATGATCAAA
GCATTAGCAGCAGTTAAAAAACAAATTGAAGAAATAAATGAATATGAAAA
AAGAATTGGACCAGATTGTAATTTATCACAATTCCAAGTAACATTAGAGA
ATTTTAATAAATTAAGACAAGCACAAAATGCAGTTATATTAGCTAAACAA
AGTAAAGCAAATAGTGGTAAGATAGTTGAACCAACCGAAGCACAATTGGT
AGCCAATTTCATTGAATGGTTAAAGGGTAAAGGATTTGATGAAAGTAAAT
GTAAAGTAAAGATTGATAGAAACACATCAGAGGGTACTTGGTTTAGTTGC
AACTCAAGACATTAAAGAGGGAGAGGATTTTGTAGAGATACCAAGCAACC
TTTTCATTACGACTGCAGTAGCATTCCAGGGATTGGGAAAACCACCAATT
TTAGAGAATGACCGTTTAATTCAATCGATTCCAGGTATTTTATTATCAAT
TTTTTTAGTTAAGGAATTGTCCAACCCAACCTCTGAATGGGGACCATATA
TAAAACTATTACCAAAACAATACAACACCGTCTATTATTGGGGTCTCAAG
GAGTTTACCCAATTCAGAGGCTCACCAAATTTAGAGTATGCCATGAGATA
TGTTCGTGGTGCCATGCGTCAATATTGTTATCTCTACTCAATGATTGATC
GTACTCAAAGTAATATTATGCCAATTTCATCATTTACATGGGATGCCTTT
GTTTGGGCCATTTCAACCGTTCAATCACGTCAAAATCCAGTCTATGCAGG
TAATGGTAATGGTAGTATTATGGCTTTGATTCCATTTTGGGATTTCTGTA
ATCACTCAAGCACCGGTAGCAAAATCACCTCATTCTATCACATGGATTCC
AATTGTATGACCAGTGGCGCCATAAAGGATTTTAAAAAGGGTGAGCAAGT
TTACATGTTCTATGGACCACGTGATAACACTCAATTGTTAATGCATGCTG
GTTTCGCAACTAAAACCAATCTCCATGATTCTTATCCATTCGAATTACAT
TTGTTAGAAGGTAATCATGAAATTCGTCATGATAAAGTTCATCTCCTCGA
AGAACGTGGTATTAGAGATGGTGTCGTTGTAAACTTAAATCAAAATCCAA
CCTCAAATGAACTCCCACTCGAATTGATTCCATTCTATCGTATCTATGCC
CTCAGTGAACAAGAAACTCGTGCAATCGCACCACCACAAGTACCTGGTGA
ACATAATCATCATCATGGCCATCAACTCGAACTTAAACCATTGGCTTTCA
AAATTATCACTCAAGAGAATGAAGAGAAAGCTTATTCAAATTTGGTTCAA
GCACTCAAAGGTAAACTTGCTTCTTATCCAACCACTTTAGAAGAGGATGA
ACAAGAATTGAAAAAGAATCCACCTGCAAATCAAAGATTCATTTTATACA
CTAAAATCAATGAAAAGAAAATTTTAGATAGAAATATCAAATATCTTGAA
TCTTTAATTAAAAAAGGTGTTATGAATGTTACCTTCAAATTACCAGAATT
AGTTGAACATACTGAACATGCTAATCATGATCATGAACATGGTGATAATT
GTAATCATGAAGATCATGGTAGTCATGGTCATTCTCATGGTGGTGATGAT
AGTCATGGTCACTCTCATGGTGGTAATGATAATCATAATCATTCACATGG
TGGTCATGGTCATTCACATCAACATGGTGCAAATTGTAACCATTAAATAA
ACAATCAAAAAAAAGTTACCATCAACTCGAACTTAAACCATTGGCTTTCA
AAATTATCACTCAAGAGAATGAAGAGAAAGCTTATTCAAATTTGGTTCAA
GCACTCAAAGGTAAACTTGCTTCTTATCCAACCACTTTAGAAGAGGATGA
ACAAGAATTGAAAAAGAATCCACCTGCAAATCAAAGATTCATTTTATACA
CTAAAATCAATGAAAAGAAAATTTTAGATAGAAATATCAAATATCTTGAA
TCTTTAATTAAAAAAGGTGTTATGAATGTTACCTTCAAATTACCAGAATT
AGTTGAACATACTGAACATGCTAATCATGATCATGAACATGGTGATAATT
GTAATCATGAAGATCATGGTAGTCATGGTCATTCTCATGGTGGTGATGAT
AGTCATGGTCACTCTCATGGTGGTAATGATAATCATAATCATTCACATGG
TGGTCATGGTCATTCACATCAACATGGTGCAAATTGTAACCATTAAATAA
ACAATCAAAAAAAAGTTA----------TAACCANCCAAAAAAAGGTTAA
AAAAAAGGAAAAAAAAAAAAAATATTAGAATACAATACAAATAATATATG
TTTAGAATTATCAAATGTAAAGGATCGAATAAATTCTATTTAAATAATTA
AAAACTTTCAAA

Gap gap included
Contig length 2652
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3516320
End point 3518090
Strand (PLUS/MINUS) PLUS
Number of clones 49
Number of EST 88
Link to clone list U15581
List of clone(s)

est1=AFG817F,1,592
est2=AFB204F,228,774
est3=SFE438F,228,485
est4=SFI150F,229,682
est5=VFL377F,229,958
est6=AFH114F,232,731
est7=AFF134F,246,868
est8=AFF257F,246,847
est9=AFF620F,246,771
est10=AFK625F,246,836
est11=CFB176F,246,725
est12=SFI708F,246,838
est13=VFA711F,246,756
est14=VFB162F,246,775
est15=VFD341F,246,921
est16=VFF214F,246,815
est17=VFI321F,246,837
est18=VFK465F,246,772
est19=AFE733F,247,850
est20=CFC487F,247,847
est21=VFB683F,247,808
est22=AFB230F,249,919
est23=AFO711F,249,881
est24=AHJ757F,249,870
est25=CFE610F,249,656
est26=CHC828F,249,833
est27=SFE514F,249,902
est28=VFE372F,249,835
est29=VFJ139F,249,774
est30=VFJ817F,249,861
est31=VFN365F,249,902
est32=AFA828F,252,897
est33=AFJ504F,252,920
est34=CFC678F,252,922
est35=AFD752F,256,758
est36=VFA239F,256,810
est37=VFJ717F,256,848
est38=AFB815F,257,921
est39=VFA678F,257,737
est40=VFJ270F,257,900
est41=CFJ145F,268,770
est42=AFG157F,278,921
est43=CHC776F,309,654
est44=SFL105F,390,659
est45=AFF359F,753,1347
est46=VFA540F,755,1371
est47=VFA239Z,1280,2027
est48=AFO711Z,1281,1974
est49=VFI321Z,1281,2019
est50=VFA711Z,1282,1977
est51=VFJ817Z,1282,1987
est52=AFE733Z,1283,1984
est53=AFG817Z,1283,2024
est54=AFK625Z,1283,1974
est55=AFF620Z,1284,1954
est56=VFK465Z,1292,1986
est57=AFB815Z,1305,1984
est58=AFF257Z,1309,2015
est59=SLA394F,1309,1525
est60=CHC828Z,1310,2015
est61=SFI150Z,1310,1975
est62=AFG157Z,1312,2016
est63=VFJ139Z,1312,1953
est64=VFN365Z,1313,2019
est65=SFI708Z,1336,2018
est66=VFE372Z,1338,2005
est67=CFE610Z,1341,1975
est68=AFF134Z,1351,1920
est69=VFB162Z,1356,1900
est70=SFE438Z,1364,1986
est71=VFL377Z,1365,1987
est72=VFF214Z,1367,2019
est73=VFJ717Z,1368,2027
est74=VFA678Z,1371,2027
est75=AFH114Z,1390,1983
est76=AFA828Z,1392,2016
est77=AHJ757Z,1400,1777
est78=CFC487Z,1443,2016
est79=AFE833Z,1494,1973
est80=AFF359H,1519,2518
est81=SLA394Z,1522,2029
est82=AFD752Z,1529,1974
est83=VFB683Z,1645,1839
est84=VFA540Z,1654,1927
est85=SFL105Z,1667,1776
est86=AFF359Z,2519,2652
est87=SFA220Z,2519,2599
est88=SFE514Z,2523,2652
Translated Amino Acid sequence
ycvfntlttsffdlsfit*v*rqmkhqnhisq*gcdftmakdktigsiasncrspvqnfs
nlvltleks*nditdtnhshtfivskildfyiytfnndqsisss*ktn*rnk*i*kknwt
rl*fitipsniref**iktstkcsyis*tk*sk*w*ds*tnrstigsqfh*mvkg*ri**
k*m*skd**khirgylv*lqlktlkreril*ryqatfslrlq*hsrdwenhqf*rmtv*f
nrfqvfyyqff*lrncptqplngdhi*nyyqnnttpsiigvsrslpnseahqi*smp*dm
fvvpcvnivistq*livlkvilcqfhhlhgmplfgpfqpfnhvkiqsmqvmvmvvlwl*f
hfgisvitqapvaksphsitwipiv*pvap*rilkrvskftcsmdhvitlnc*cmlvsql
kpismilihsnyic*kvimkfvmikfissknvvlemvsl*t*ikiqpqmnshsn*fhsiv
smpsvnkklvqshhhkylvniiiimainsnlnhwlsklslkrmkrkliqiwfkhskvnll
liqpl*krmnkn*krihlqikdsfytlksmkrkf*ieisnilnl*lkkvl*mlpsnyqn*
lnilnmlimimnmviivimkimvvmvilmvvmivmvtlmvvmiiiiihmvvmvihinmvq
ivtik*tikkklpstrt*tigfqnyhsre*reslfkfgsstqr*tcflsnhfrrg*trie
kestckskihfih*nq*kenfr*kyqis*ifn*krcyecylqitris*ty*tc*s*s*tw
**l*s*rsw*swsfsww***swslsww***s*sftwwswsftstwckl*PLNKQSKKS--
-

---TXQKKVKKKEKKKKY*ntiqiiyv*nyqm*rie*ilfk*lktfk


Translated Amino Acid sequence (All Frames)
Frame A:
iivflth*qhpslt*asslkcnvr*ntriifhskgaislwqrikr*drsraiadlpcris
qiwc*rwrnprmispiqtilihslsvrs*isiyihltmikalaavkkqieeineyekrig
pdcnlsqfqvtlenfnklrqaqnavilakqskansgkivepteaqlvanfiewlkgkgfd
eskckvkidrntsegtwfscnsrh*rgrgfcrdtkqpfhydcssipgigkttnfre*pfn
sidsryfiinffs*givqpnl*mgtiyktitktiqhrlllgsqgvypiqrltkfrvchei
cswchasillsllnd*sysk*yyanfiiymgclclghfnrsitsksslcr*w*w*yygfd
silgfl*slkhr*qnhlilshgfqlydqwrhkgf*kg*aslhvlwtt**hsivnacwfrn
*nqsp*flsiritfvrr*s*nss**sssprrtwy*rwcrcklksksnlk*tptridsils
ylcpq*trnscnrtttstw*t*ssswpstrt*tigfqnyhsre*reslfkfgsstqr*tc
flsnhfrrg*triekestckskihfih*nq*kenfr*kyqis*ifn*krcyecylqitri
s*ty*tc*s*s*tw**l*s*rsw*swsfsww***swslsww***s*sftwwswsftstwc
kl*PLNKQSKKSyhqlelkplafkiitqeneekaysnlvqalkgklasypttleedeqel
kknppanqrfilytkinekkildrnikyleslikkgvmnvtfklpelvehtehanhdheh
gdncnhedhgshghshggddshghshggndnhnhshgghghshqhgancnh*innqkkv-
--

---*pxkkrlkkrkkkkniriqyk*ymfriikckgsnkfylnn*kls

Frame B:
llcf*hinnill*lklhhlsvtsdetpesyftvrvrfhygkg*ndridreqlqisraefl
kfgvnageile*yhrykpfsyihcq*dlrflyiyi*q*skh*qqlknklkk*mnmkkeld
qiviyhnsk*h*rilin*dkhkmqly*lnkvkqivvr*lnqpkhnw*pislng*rvkdlm
kvnvk*rliethqrvlglvatqdikegedfveipsnlfittavafqglgkppilendrli
qsipgillsiflvkelsnptsewgpyikllpkqyntvyywglkeftqfrgspnleyamry
vrgamrqycylysmidrtqsnimpissftwdafvwaistvqsrqnpvyagngngsimali
pfwdfcnhsstgskitsfyhmdsncmtsgaikdfkkgeqvymfygprdntqllmhagfat
ktnlhdsypfelhllegnheirhdkvhlleergirdgvvvnlnqnptsnelplelipfyr
iyalseqetraiappqvpgehnhhhghqlelkplafkiitqeneekaysnlvqalkgkla
sypttleedeqelkknppanqrfilytkinekkildrnikyleslikkgvmnvtfklpel
vehtehanhdhehgdncnhedhgshghshggddshghshggndnhnhshgghghshqhga
ncnh*innqkkvtinsnlnhwlsklslkrmkrkliqiwfkhskvnllliqpl*krmnkn*
krihlqikdsfytlksmkrkf*ieisnilnl*lkkvl*mlpsnyqn*lnilnmlimimnm
viivimkimvvmvilmvvmivmvtlmvvmiiiiihmvvmvihinmvqivtik*tikkkl-
--

---nxpkkg*kkgkkkkileyntnniclelsnvkdrinsi*iiknfq

Frame C:
ycvfntlttsffdlsfit*v*rqmkhqnhisq*gcdftmakdktigsiasncrspvqnfs
nlvltleks*nditdtnhshtfivskildfyiytfnndqsisss*ktn*rnk*i*kknwt
rl*fitipsniref**iktstkcsyis*tk*sk*w*ds*tnrstigsqfh*mvkg*ri**
k*m*skd**khirgylv*lqlktlkreril*ryqatfslrlq*hsrdwenhqf*rmtv*f
nrfqvfyyqff*lrncptqplngdhi*nyyqnnttpsiigvsrslpnseahqi*smp*dm
fvvpcvnivistq*livlkvilcqfhhlhgmplfgpfqpfnhvkiqsmqvmvmvvlwl*f
hfgisvitqapvaksphsitwipiv*pvap*rilkrvskftcsmdhvitlnc*cmlvsql
kpismilihsnyic*kvimkfvmikfissknvvlemvsl*t*ikiqpqmnshsn*fhsiv
smpsvnkklvqshhhkylvniiiimainsnlnhwlsklslkrmkrkliqiwfkhskvnll
liqpl*krmnkn*krihlqikdsfytlksmkrkf*ieisnilnl*lkkvl*mlpsnyqn*
lnilnmlimimnmviivimkimvvmvilmvvmivmvtlmvvmiiiiihmvvmvihinmvq
ivtik*tikkklpstrt*tigfqnyhsre*reslfkfgsstqr*tcflsnhfrrg*trie
kestckskihfih*nq*kenfr*kyqis*ifn*krcyecylqitris*ty*tc*s*s*tw
**l*s*rsw*swsfsww***swslsww***s*sftwwswsftstwckl*PLNKQSKKS--
-

---TXQKKVKKKEKKKKY*ntiqiiyv*nyqm*rie*ilfk*lktfk

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15581-1 (Contig-U15581-1Q)
/CSM_Contig/Contig-U15581-1Q.Seq.d
(2662 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15581-1 (Contig-U15581-1Q) /CSM_Contig/Conti... 4181 0.0
Contig-U15761-1 (Contig-U15761-1Q) /CSM_Contig/Conti... 498 e-140
Contig-U15897-1 (Contig-U15897-1Q) /CSM_Contig/Conti... 496 e-139
Contig-U13965-1 (Contig-U13965-1Q) /CSM_Contig/Conti... 494 e-139
Contig-U15118-1 (Contig-U15118-1Q) /CSM_Contig/Conti... 492 e-138
Contig-U15499-1 (Contig-U15499-1Q) /CSM_Contig/Conti... 488 e-137
Contig-U15735-1 (Contig-U15735-1Q) /CSM_Contig/Conti... 454 e-127
Contig-U04922-1 (Contig-U04922-1Q) /CSM_Contig/Conti... 48 7e-05
Contig-U11314-1 (Contig-U11314-1Q) /CSM_Contig/Conti... 46 3e-04
Contig-U15704-1 (Contig-U15704-1Q) /CSM_Contig/Conti... 38 0.068

>Contig-U15581-1 (Contig-U15581-1Q) /CSM_Contig/Contig-U15581-1Q.Seq.d
Length = 2662

Score = 4181 bits (2109), Expect = 0.0
Identities = 2139/2154 (99%)
Strand = Plus / Plus


Query: 353 gaattggaccagattgtaatttatcacaattccaagtaacattagagaattttaataaat 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaattggaccagattgtaatttatcacaattccaagtaacattagagaattttaataaat 412


Query: 413 taagacaagcacaaaatgcagttatattagctaaacaaagtaaagcaaatagtggtaaga 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 taagacaagcacaaaatgcagttatattagctaaacaaagtaaagcaaatagtggtaaga 472


Query: 473 tagttgaaccaaccgaagcacaattggtagccaatttcattgaatggttaaagggtaaag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tagttgaaccaaccgaagcacaattggtagccaatttcattgaatggttaaagggtaaag 532


Query: 533 gatttgatgaaagtaaatgtaaagtaaagattgatagaaacacatcagagggtacttggt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gatttgatgaaagtaaatgtaaagtaaagattgatagaaacacatcagagggtacttggt 592


Query: 593 ttagttgcaactcaagacattaaagagggagaggattttgtagagataccaagcaacctt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttagttgcaactcaagacattaaagagggagaggattttgtagagataccaagcaacctt 652


Query: 653 ttcattacgactgcagtagcattccagggattgggaaaaccaccaattttagagaatgac 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ttcattacgactgcagtagcattccagggattgggaaaaccaccaattttagagaatgac 712


Query: 713 cgtttaattcaatcgattccaggtattttattatcaannnnnnnagttaaggaattgtcc 772
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 713 cgtttaattcaatcgattccaggtattttattatcaatttttttagttaaggaattgtcc 772


Query: 773 aacccaacctctgaatggggaccatatataaaactattaccaaaacaatacaacaccgtc 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 aacccaacctctgaatggggaccatatataaaactattaccaaaacaatacaacaccgtc 832


Query: 833 tattattggggtctcaaggagtttacccaattcagaggctcaccaaatttagagtatgcc 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tattattggggtctcaaggagtttacccaattcagaggctcaccaaatttagagtatgcc 892


Query: 893 atgagatatgttcgtggtgccatgcgtcaatattgttatctctactcaatgattgatcgt 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 atgagatatgttcgtggtgccatgcgtcaatattgttatctctactcaatgattgatcgt 952


Query: 953 actcaaagtaatattatgccaatttcatcatttacatgggatgcctttgtttgggccatt 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 actcaaagtaatattatgccaatttcatcatttacatgggatgcctttgtttgggccatt 1012


Query: 1013 tcaaccgttcaatcacgtcaaaatccagtctatgcaggtaatggtaatggtagtattatg 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 tcaaccgttcaatcacgtcaaaatccagtctatgcaggtaatggtaatggtagtattatg 1072


Query: 1073 gctttgattccattttgggatttctgtaatcactcaagcaccggtagcaaaatcacctca 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 gctttgattccattttgggatttctgtaatcactcaagcaccggtagcaaaatcacctca 1132


Query: 1133 ttctatcacatggattccaattgtatgaccagtggcgccataaaggattttaaaaagggt 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 ttctatcacatggattccaattgtatgaccagtggcgccataaaggattttaaaaagggt 1192


Query: 1193 gagcaagtttacatgttctatggaccacgtgataacactcaattgttaatgcatgctggt 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 gagcaagtttacatgttctatggaccacgtgataacactcaattgttaatgcatgctggt 1252


Query: 1253 ttcgcaactaaaaccaatctccatgattcttatccattcgaattacatttgttagaaggt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 ttcgcaactaaaaccaatctccatgattcttatccattcgaattacatttgttagaaggt 1312


Query: 1313 aatcatgaaattcgtcatgataaagttcatctcctcgaagaacgtggtattagagatggt 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1313 aatcatgaaattcgtcatgataaagttcatctcctcgaagaacgtggtattagagatggt 1372


Query: 1373 gtcgttgtaaacttaaatcaaaatccaacctcaaatgaactcccactcgaattgattcca 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 gtcgttgtaaacttaaatcaaaatccaacctcaaatgaactcccactcgaattgattcca 1432


Query: 1433 ttctatcgtatctatgccctcagtgaacaagaaactcgtgcaatcgcaccaccacaagta 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 ttctatcgtatctatgccctcagtgaacaagaaactcgtgcaatcgcaccaccacaagta 1492


Query: 1493 cctggtgaacataatcatcatcatggccatcaactcgaacttaaaccattggctttcaaa 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 cctggtgaacataatcatcatcatggccatcaactcgaacttaaaccattggctttcaaa 1552


Query: 1553 attatcactcaagagaatgaagagaaagcttattcaaatttggttcaagcactcaaaggt 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 attatcactcaagagaatgaagagaaagcttattcaaatttggttcaagcactcaaaggt 1612


Query: 1613 aaacttgcttcttatccaaccactttagaagaggatgaacaagaattgaaaaagaatcca 1672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 aaacttgcttcttatccaaccactttagaagaggatgaacaagaattgaaaaagaatcca 1672


Query: 1673 cctgcaaatcaaagattcattttatacactaaaatcaatgaaaagaaaattttagataga 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 cctgcaaatcaaagattcattttatacactaaaatcaatgaaaagaaaattttagataga 1732


Query: 1733 aatatcaaatatcttgaatctttaattaaaaaaggtgttatgaatgttaccttcaaatta 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 aatatcaaatatcttgaatctttaattaaaaaaggtgttatgaatgttaccttcaaatta 1792


Query: 1793 ccagaattagttgaacatactgaacatgctaatcatgatcatgaacatggtgataattgt 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 ccagaattagttgaacatactgaacatgctaatcatgatcatgaacatggtgataattgt 1852


Query: 1853 aatcatgaagatcatggtagtcatggtcattctcatggtggtgatgatagtcatggtcac 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 aatcatgaagatcatggtagtcatggtcattctcatggtggtgatgatagtcatggtcac 1912


Query: 1913 tctcatggtggtaatgataatcataatcattcacatggtggtcatggtcattcacatcaa 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 tctcatggtggtaatgataatcataatcattcacatggtggtcatggtcattcacatcaa 1972


Query: 1973 catggtgcaaattgtaaccattaaataaacaatcnnnnnnnngttaccatcaactcgaac 2032
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1973 catggtgcaaattgtaaccattaaataaacaatcaaaaaaaagttaccatcaactcgaac 2032


Query: 2033 ttaaaccattggctttcaaaattatcactcaagagaatgaagagaaagcttattcaaatt 2092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 ttaaaccattggctttcaaaattatcactcaagagaatgaagagaaagcttattcaaatt 2092


Query: 2093 tggttcaagcactcaaaggtaaacttgcttcttatccaaccactttagaagaggatgaac 2152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 tggttcaagcactcaaaggtaaacttgcttcttatccaaccactttagaagaggatgaac 2152


Query: 2153 aagaattgaaaaagaatccacctgcaaatcaaagattcattttatacactaaaatcaatg 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 aagaattgaaaaagaatccacctgcaaatcaaagattcattttatacactaaaatcaatg 2212


Query: 2213 aaaagaaaattttagatagaaatatcaaatatcttgaatctttaattaaaaaaggtgtta 2272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 aaaagaaaattttagatagaaatatcaaatatcttgaatctttaattaaaaaaggtgtta 2272


Query: 2273 tgaatgttaccttcaaattaccagaattagttgaacatactgaacatgctaatcatgatc 2332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 tgaatgttaccttcaaattaccagaattagttgaacatactgaacatgctaatcatgatc 2332


Query: 2333 atgaacatggtgataattgtaatcatgaagatcatggtagtcatggtcattctcatggtg 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2333 atgaacatggtgataattgtaatcatgaagatcatggtagtcatggtcattctcatggtg 2392


Query: 2393 gtgatgatagtcatggtcactctcatggtggtaatgataatcataatcattcacatggtg 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2393 gtgatgatagtcatggtcactctcatggtggtaatgataatcataatcattcacatggtg 2452


Query: 2453 gtcatggtcattcacatcaacatggtgcaaattgtaaccattaaataaacaatc 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2453 gtcatggtcattcacatcaacatggtgcaaattgtaaccattaaataaacaatc 2506


Score = 624 bits (315), Expect = e-178
Identities = 315/315 (100%)
Strand = Plus / Plus


Query: 1 attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 60


Query: 61 tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 120


Query: 121 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 180


Query: 181 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 240


Query: 241 atacattcattgtcagtaagatcttagatttctatatatatacatttaacaatgatcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atacattcattgtcagtaagatcttagatttctatatatatacatttaacaatgatcaaa 300


Query: 301 gcattagcagcagtt 315
|||||||||||||||
Sbjct: 301 gcattagcagcagtt 315


Score = 178 bits (90), Expect = 3e-44
Identities = 90/90 (100%)
Strand = Plus / Plus


Query: 2573 tattagaatacaatacaaataatatatgtttagaattatcaaatgtaaaggatcgaataa 2632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2573 tattagaatacaatacaaataatatatgtttagaattatcaaatgtaaaggatcgaataa 2632


Query: 2633 attctatttaaataattaaaaactttcaaa 2662
||||||||||||||||||||||||||||||
Sbjct: 2633 attctatttaaataattaaaaactttcaaa 2662


>Contig-U15761-1 (Contig-U15761-1Q) /CSM_Contig/Contig-U15761-1Q.Seq.d
Length = 4883

Score = 498 bits (251), Expect = e-140
Identities = 251/251 (100%)
Strand = Plus / Plus


Query: 1 attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 2244


Query: 61 tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 2304


Query: 121 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 2364


Query: 181 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 2424


Query: 241 atacattcatt 251
|||||||||||
Sbjct: 2425 atacattcatt 2435


>Contig-U15897-1 (Contig-U15897-1Q) /CSM_Contig/Contig-U15897-1Q.Seq.d
Length = 2889

Score = 496 bits (250), Expect = e-139
Identities = 250/250 (100%)
Strand = Plus / Plus


Query: 1 attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 60


Query: 61 tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 120


Query: 121 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 180


Query: 181 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 240


Query: 241 atacattcat 250
||||||||||
Sbjct: 241 atacattcat 250


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 46,025
Number of Sequences: 8402
Number of extensions: 46025
Number of successful extensions: 5352
Number of sequences better than 10.0: 153
length of query: 2662
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2645
effective length of database: 7,932,708
effective search space: 20982012660
effective search space used: 20982012660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 1
Homology vs DNA
Query= Contig-U15581-1 (Contig-U15581-1Q) /CSM_Contig/Contig-U15581-1Q.Seq.d
(2662 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ346691) Dictyostelium discoideum cDNA clone:dda24p14, 3' ... 1411 0.0 1
(BJ431947) Dictyostelium discoideum cDNA clone:ddv17j05, 3' ... 1402 0.0 2
(BJ342324) Dictyostelium discoideum cDNA clone:dda13a15, 3' ... 1378 0.0 1
(BJ378116) Dictyostelium discoideum cDNA clone:ddc27h08, 3' ... 1368 0.0 1
(BJ346165) Dictyostelium discoideum cDNA clone:dda30f03, 3' ... 1368 0.0 1
(BJ340063) Dictyostelium discoideum cDNA clone:dda11a16, 3' ... 1344 0.0 2
(BJ339749) Dictyostelium discoideum cDNA clone:dda10b09, 3' ... 1336 0.0 2
(BJ343166) Dictyostelium discoideum cDNA clone:dda22a08, 3' ... 1324 0.0 2
(BJ403072) Dictyostelium discoideum cDNA clone:dds18p01, 3' ... 1302 0.0 1
(BJ435556) Dictyostelium discoideum cDNA clone:ddv27b17, 3' ... 1279 0.0 2
(BJ428213) Dictyostelium discoideum cDNA clone:ddv11k04, 3' ... 1273 0.0 1
(BJ340864) Dictyostelium discoideum cDNA clone:dda4n04, 3' e... 1273 0.0 2
(BJ402616) Dictyostelium discoideum cDNA clone:dds17c13, 3' ... 1265 0.0 2
(BJ433341) Dictyostelium discoideum cDNA clone:ddv21b18, 3' ... 1263 0.0 3
(BJ432679) Dictyostelium discoideum cDNA clone:ddv19m09, 3' ... 1261 0.0 1
(BJ432837) Dictyostelium discoideum cDNA clone:ddv20b06, 3' ... 1239 0.0 4
(BJ429009) Dictyostelium discoideum cDNA clone:ddv2f03, 3' e... 1239 0.0 4
(BJ342442) Dictyostelium discoideum cDNA clone:dda14b06, 3' ... 1223 0.0 2
(BJ371856) Dictyostelium discoideum cDNA clone:ddc10c04, 3' ... 1221 0.0 2
(BJ340489) Dictyostelium discoideum cDNA clone:dda2h08, 3' e... 1219 0.0 1
(BJ431054) Dictyostelium discoideum cDNA clone:ddv9p17, 3' e... 1207 0.0 3
(BJ340199) Dictyostelium discoideum cDNA clone:dda12g06, 3' ... 1189 0.0 3
(BJ410947) Dictyostelium discoideum cDNA clone:ddv2o09, 5' e... 1174 0.0 2
(BJ323647) Dictyostelium discoideum cDNA clone:dda11f15, 5' ... 1172 0.0 1
(BJ400243) Dictyostelium discoideum cDNA clone:dds9l10, 3' e... 1164 0.0 2
(BJ434092) Dictyostelium discoideum cDNA clone:ddv23j19, 3' ... 1160 0.0 2
(BJ428834) Dictyostelium discoideum cDNA clone:ddv1m10, 3' e... 1156 0.0 3
(BJ374029) Dictyostelium discoideum cDNA clone:ddc5n22, 3' e... 1118 0.0 1
(BJ340004) Dictyostelium discoideum cDNA clone:dda11c09, 3' ... 1118 0.0 1
(BJ429265) Dictyostelium discoideum cDNA clone:ddv2k20, 3' e... 1106 0.0 2
(BJ429479) Dictyostelium discoideum cDNA clone:ddv3k15, 3' e... 1078 0.0 1
(BJ432836) Dictyostelium discoideum cDNA clone:ddv20b05, 3' ... 1061 0.0 3
(BJ342853) Dictyostelium discoideum cDNA clone:dda15k03, 3' ... 1023 0.0 3
(BJ325248) Dictyostelium discoideum cDNA clone:dda13a15, 5' ... 779 0.0 3
(BJ416842) Dictyostelium discoideum cDNA clone:ddv27b17, 5' ... 460 0.0 4
(BJ415825) Dictyostelium discoideum cDNA clone:ddv23j19, 5' ... 460 0.0 3
(BJ414567) Dictyostelium discoideum cDNA clone:ddv19k18, 5' ... 460 0.0 4
(BJ412182) Dictyostelium discoideum cDNA clone:ddv7b11, 5' e... 460 0.0 4
(BJ360592) Dictyostelium discoideum cDNA clone:ddc6k20, 5' e... 460 0.0 4
(BJ327336) Dictyostelium discoideum cDNA clone:dda20g01, 5' ... 460 0.0 4
(BJ326008) Dictyostelium discoideum cDNA clone:dda3k08, 5' e... 460 0.0 4
(BJ325799) Dictyostelium discoideum cDNA clone:dda2h08, 5' e... 460 0.0 4
(BJ323979) Dictyostelium discoideum cDNA clone:dda4n04, 5' e... 460 0.0 4
(BJ386694) Dictyostelium discoideum cDNA clone:dds10k03, 5' ... 452 0.0 4
(BJ328911) Dictyostelium discoideum cDNA clone:dda30f03, 5' ... 460 0.0 4
(BJ325353) Dictyostelium discoideum cDNA clone:dda14b06, 5' ... 624 0.0 2
(BJ323581) Dictyostelium discoideum cDNA clone:dda11c09, 5' ... 452 0.0 4
(BJ335507) Dictyostelium discoideum cDNA clone:dda50b15, 5' ... 460 0.0 4
(BJ414655) Dictyostelium discoideum cDNA clone:ddv20b06, 5' ... 460 0.0 4
(BJ323633) Dictyostelium discoideum cDNA clone:dda11a16, 5' ... 460 0.0 4
(BJ360405) Dictyostelium discoideum cDNA clone:ddc5n22, 5' e... 460 0.0 4
(BJ323365) Dictyostelium discoideum cDNA clone:dda10b09, 5' ... 460 0.0 4
(BJ413836) Dictyostelium discoideum cDNA clone:ddv17j05, 5' ... 460 0.0 4
(BJ327918) Dictyostelium discoideum cDNA clone:dda22a08, 5' ... 460 0.0 4
(BJ412745) Dictyostelium discoideum cDNA clone:ddv9p17, 5' e... 460 0.0 4
(BJ363569) Dictyostelium discoideum cDNA clone:ddc27h08, 5' ... 460 0.0 4
(BJ389285) Dictyostelium discoideum cDNA clone:dds18p01, 5' ... 460 0.0 4
(BJ414654) Dictyostelium discoideum cDNA clone:ddv20b05, 5' ... 460 0.0 4
(BJ410081) Dictyostelium discoideum cDNA clone:ddv11k04, 5' ... 460 0.0 4
(BJ411532) Dictyostelium discoideum cDNA clone:ddv4e22, 5' e... 460 0.0 4
(BJ410667) Dictyostelium discoideum cDNA clone:ddv1m10, 5' e... 460 0.0 4
(BJ329702) Dictyostelium discoideum cDNA clone:dda26a01, 5' ... 460 0.0 4
(BJ339750) Dictyostelium discoideum cDNA clone:dda10b10, 3' ... 886 0.0 2
(BJ329363) Dictyostelium discoideum cDNA clone:dda24p14, 5' ... 460 0.0 4
(BJ414510) Dictyostelium discoideum cDNA clone:ddv19m09, 5' ... 460 0.0 4
(BJ415125) Dictyostelium discoideum cDNA clone:ddv21b18, 5' ... 460 0.0 4
(BJ323751) Dictyostelium discoideum cDNA clone:dda12g06, 5' ... 460 0.0 4
(BJ411256) Dictyostelium discoideum cDNA clone:ddv3k15, 5' e... 460 0.0 4
(BJ325936) Dictyostelium discoideum cDNA clone:dda3g02, 5' e... 452 0.0 4
(AU040092) Dictyostelium discoideum slug cDNA, clone SLA394. 817 0.0 3
(BJ410839) Dictyostelium discoideum cDNA clone:ddv2f03, 5' e... 771 0.0 2
(BJ324894) Dictyostelium discoideum cDNA clone:dda8h13, 5' e... 460 0.0 3
(BJ341886) Dictyostelium discoideum cDNA clone:dda8h13, 3' e... 779 0.0 3
(BJ361923) Dictyostelium discoideum cDNA clone:ddc19i11, 5' ... 454 0.0 4
(BJ326274) Dictyostelium discoideum cDNA clone:dda15k03, 5' ... 460 0.0 4
(BJ360018) Dictyostelium discoideum cDNA clone:ddc3g19, 5' e... 460 0.0 4
(BJ411072) Dictyostelium discoideum cDNA clone:ddv2k20, 5' e... 381 0.0 5
(BJ353520) Dictyostelium discoideum cDNA clone:dda50b15, 3' ... 692 0.0 1
(BJ358532) Dictyostelium discoideum cDNA clone:ddc10c04, 5' ... 452 0.0 3
(BJ389098) Dictyostelium discoideum cDNA clone:dds17c13, 5' ... 325 0.0 5
(BJ429129) Dictyostelium discoideum cDNA clone:ddv2o09, 3' e... 537 e-148 1
(BJ363670) Dictyostelium discoideum cDNA clone:ddc27h19, 5' ... 430 e-147 2
(BJ365960) Dictyostelium discoideum cDNA clone:ddc37o04, 5' ... 498 e-136 1
(BJ327787) Dictyostelium discoideum cDNA clone:dda21c22, 5' ... 498 e-136 1
(BJ396357) Dictyostelium discoideum cDNA clone:dds42k18, 5' ... 496 e-135 1
(BJ416614) Dictyostelium discoideum cDNA clone:ddv26p24, 5' ... 494 e-135 1
(BJ415706) Dictyostelium discoideum cDNA clone:ddv23o10, 5' ... 492 e-134 1
(BJ413129) Dictyostelium discoideum cDNA clone:ddv14d12, 5' ... 492 e-134 1
(BJ412437) Dictyostelium discoideum cDNA clone:ddv8p09, 5' e... 488 e-133 1
(BJ424476) Dictyostelium discoideum cDNA clone:ddv52f14, 5' ... 454 e-123 1
(BJ426476) Dictyostelium discoideum cDNA clone:ddv59k05, 5' ... 446 e-120 1
(BJ414068) Dictyostelium discoideum cDNA clone:ddv17p22, 5' ... 446 e-120 1
(BJ390619) Dictyostelium discoideum cDNA clone:dds23i01, 5' ... 349 e-116 2
(AU060135) Dictyostelium discoideum slug cDNA, clone SLA394. 430 e-115 1
(BJ388407) Dictyostelium discoideum cDNA clone:dds9l10, 5' e... 232 1e-88 2
(BJ425973) Dictyostelium discoideum cDNA clone:ddv57o13, 5' ... 309 3e-79 1
(BJ431471) Dictyostelium discoideum cDNA clone:ddv14d12, 3' ... 214 1e-50 1
(BJ429764) Dictyostelium discoideum cDNA clone:ddv4e22, 3' e... 186 6e-49 2
(BJ397911) Dictyostelium discoideum cDNA clone:dds10k03, 3' ... 178 7e-40 1
(BJ340082) Dictyostelium discoideum cDNA clone:dda11f15, 3' ... 178 7e-40 1
(BJ401393) Dictyostelium discoideum cDNA clone:dds23i01, 3' ... 157 3e-33 1
(BJ398586) Dictyostelium discoideum cDNA clone:dds1g06, 3' e... 74 3e-08 1
(AU037574) Dictyostelium discoideum slug cDNA, clone SSD806. 54 3e-06 2
(AZ534715) ENTCD30TF Entamoeba histolytica Sheared DNA Entam... 38 3e-06 4
(DD380311) A polynucleotide for detecting heavy metal respon... 66 7e-06 1
(AL132876) Caenorhabditis elegans YAC Y105E8A. 66 7e-06 1
(AL022594) Caenorhabditis elegans DNA *** SEQUENCING IN PROG... 66 7e-06 1
(FC638310) CAXU3126.fwd CAXU Lottia gigantea from female gon... 42 1e-04 2
(FC689851) CAXX20911.fwd CAXX Lottia gigantea from male gona... 42 1e-04 2
(FC815680) Sr_pAMT7_03n12_T7 S. ratti mixed stage pAMP Stron... 48 2e-04 3
(FC815780) Sr_pAMT7_04c05_T7 S. ratti mixed stage pAMP Stron... 48 0.002 2
(BI323882) kt46b09.y3 Strongyloides ratti L1 pAMP1 v3 Chiape... 48 0.002 2
(EC649497) BHE00008048 Blastocystis hominis Regular, non-nor... 34 0.003 5
(CO649843) ccp07_F01_11 Chondrus crispus protoplasts Zap Exp... 36 0.006 4
(BM879655) kt98c03.y1 Strongyloides ratti PA female naive pA... 34 0.021 4
(CQ343439) Sequence 17533 from Patent WO0157275. 28 0.021 6
(CQ306317) Sequence 17422 from Patent WO0186003. 28 0.021 6
(CQ269292) Sequence 17553 from Patent WO0157277. 28 0.021 6
(CQ231122) Sequence 17961 from Patent WO0157273. 28 0.021 6
(CQ207658) Sequence 9935 from Patent WO0157271. 28 0.021 6
(CQ183234) Sequence 14630 from Patent WO0157274. 28 0.021 6
(CQ147885) Sequence 17907 from Patent WO0157276. 28 0.021 6
(CQ109248) Sequence 18107 from Patent WO0157272. 28 0.021 6
(CQ078258) Sequence 14058 from Patent WO0157278. 28 0.021 6
(CQ058870) Sequence 9690 from Patent WO0157270. 28 0.021 6
(EE283195) SAAH-aab25a07.g1 Agen 0058 Schmidtea mediterranea... 46 0.054 2
(EC617105) SAAH-aaa32f06.g1 Agen 0058 Schmidtea mediterranea... 46 0.061 2
(EG354126) SAAH-aac74e09.g1 Agen 0058 Schmidtea mediterranea... 46 0.064 2
(EG354241) SAAH-aac75f09.g1 Agen 0058 Schmidtea mediterranea... 46 0.065 2
(EC616493) SAAH-aaa18d07.g1 Agen 0058 Schmidtea mediterranea... 46 0.065 2
(EE668230) SAAH-aac03c02.g1 Agen 0058 Schmidtea mediterranea... 46 0.067 2
(DU406164) 1098472001705 CHORI-243 Ovis aries genomic clone ... 44 0.069 2
(EE673252) SAAH-aab83c05.g1 Agen 0058 Schmidtea mediterranea... 46 0.070 2
(EE672548) SAAH-aab76b06.g1 Agen 0058 Schmidtea mediterranea... 46 0.070 2
(AC220230) Bos taurus clone CH240-366P4, WORKING DRAFT SEQUE... 48 0.072 4
(BJ438194) Dictyostelium discoideum cDNA clone:ddv36l17, 3' ... 38 0.082 3
(BJ442485) Dictyostelium discoideum cDNA clone:ddv50c06, 3' ... 46 0.089 3
(BJ383771) Dictyostelium discoideum cDNA clone:ddc47m06, 3' ... 38 0.092 3
(EA117032) Sequence 1216 from patent US 7205146. 38 0.15 2
(EY357959) CAWZ5530.fwd CAWZ Helobdella robusta Primary Late... 34 0.24 4
(DU273528) 1098421215040 CHORI-243 Ovis aries genomic clone ... 42 0.25 2
(EL370742) CCES7756.b1_G19.ab1 CCE(LMS) endive Cichorium end... 38 0.26 2
(AM531843) Paracentrotus lividus EST, clone MPMGp1171E04100Q... 42 0.28 2
(AM598578) Paracentrotus lividus EST, clone MPMGp1174C2267Q,... 42 0.28 2
(DU206535) 1098574186844 CHORI-243 Ovis aries genomic clone ... 42 0.29 2
(AL008970) Plasmodium falciparum MAL3P4. 34 0.43 11
(ED814649) ML__Ba0094P20r ML__Ba Mimulus lewisii genomic, ge... 38 0.43 2
(FH338252) CHO_OF4601xm08f1.ab1 CHO_OF4 Nicotiana tabacum ge... 50 0.44 1
(ER583938) 1093015856482 Global-Ocean-Sampling_GS-36-01-01-2... 32 0.55 4
(CQ330708) Sequence 4802 from Patent WO0157275. 28 0.61 6
(CQ293806) Sequence 4911 from Patent WO0186003. 28 0.61 6
(CQ256718) Sequence 4979 from Patent WO0157277. 28 0.61 6
(CQ218124) Sequence 4963 from Patent WO0157273. 28 0.61 6
(CQ202546) Sequence 4823 from Patent WO0157271. 28 0.61 6
(CQ173349) Sequence 4745 from Patent WO0157274. 28 0.61 6
(CQ134868) Sequence 4890 from Patent WO0157276. 28 0.61 6
(CQ096119) Sequence 4978 from Patent WO0157272. 28 0.61 6
(CQ069070) Sequence 4870 from Patent WO0157278. 28 0.61 6
(CQ053885) Sequence 4705 from Patent WO0157270. 28 0.61 6
(EY313085) CAWX24758.fwd CAWX Helobdella robusta Primary Ear... 34 0.74 4
(CU492823) Theobroma cacao, mRNA sequence (KZ0AAD10YN10FM1). 42 0.75 2
(CU478728) Theobroma cacao, mRNA sequence (KZ0AAL11YG02FM1). 42 0.75 2
(CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 36 0.77 2
(AC160143) Pan troglodytes BAC clone CH251-565M18 from chrom... 38 0.90 2
(AC010536) Homo sapiens chromosome 16 clone RP11-278A23, com... 38 0.90 2
(AP001933) Homo sapiens genomic DNA, chromosome 18q23 clone:... 36 0.91 2
(AC096709) Homo sapiens chromosome 18, clone RP11-707P24, co... 36 0.91 2
(AL139384) Human DNA sequence from clone RP11-88E10 on chrom... 38 0.91 2
(AC100863) Homo sapiens chromosome 18, clone RP11-751H17, co... 36 0.91 2
(AC092720) Homo sapiens chromosome 16 clone RP11-482M8, comp... 38 0.92 2
(AF429315) Homo sapiens junctophilin 3 (JPH3) gene, partial ... 38 0.93 2
(AY875213) Homalodisca coagulata mitochondrion, complete gen... 36 0.98 5
(CS789487) Sequence 743 from Patent WO2005031001. 36 0.99 2
(CL097420) ISB1-29M14_Sp6.1 ISB1 Xenopus (Silurana) tropical... 32 1.0 4
(ER927060) MUGQ_CH252P287L18Sp6_CP423_069 CHORI-252 Vervet M... 42 1.0 2
(CZ533033) SRAA-aac82h05.g1 Strongyloides ratti whole genome... 38 1.0 2
(CZ534188) SRAA-aac89g06.b1 Strongyloides ratti whole genome... 38 1.1 2
(EV160153) 0084015 Brassica napus Bud library Brassica napus... 42 1.1 3
(EA341960) Sequence 14452 from patent US 7306913. 32 1.1 3
(CX961502) JGI_CAAO11439.rev NIH_XGC_tropTe5 Xenopus (Silura... 32 1.1 3
(AL425040) clone BA0AB002H10 of library BA0AB from strain CL... 36 1.2 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 38 1.2 14
(CN932396) 000429AFBC008101HT (AFBC) Royal Gala pre-opened f... 46 1.3 2
(AC185811) Bos taurus clone RP42-202N17, WORKING DRAFT SEQUE... 36 1.4 4
(AC152151) Dasypus novemcinctus clone VMRC5-422B14, WORKING ... 38 1.5 5
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 30 1.7 15
(AC120383) Mus musculus chromosome 12, clone RP24-273A7, com... 48 1.7 1
(AC102771) Mus musculus chromosome 1, clone RP23-175K23, com... 48 1.7 1
(AC148366) Callithrix jacchus clone CH259-276C6, WORKING DRA... 48 1.7 1
(AC132000) Mus musculus clone RP24-262C22, LOW-PASS SEQUENCE... 48 1.7 1
(AC220205) Bos taurus clone CH240-366C17, WORKING DRAFT SEQU... 48 1.7 1
(CC470465) CH240_144K14.TJ CHORI-240 Bos taurus genomic clon... 48 1.7 1
(DN846443) KECB28-285.g-T7 NVH bovine early embryo cDNA libr... 48 1.7 1
(CN893337) 010614AAXA007561HT (AAXA) Royal Gala 126 DAFB fru... 46 1.7 2
(AC173151) Bos taurus clone CH240-528B1, WORKING DRAFT SEQUE... 36 1.8 10
(AP008120) Lotus japonicus genomic DNA, chromosome 5, clone:... 38 1.9 9
(AC169428) Bos taurus clone CH240-208F5, WORKING DRAFT SEQUE... 40 2.0 8
(FD989772) RR4H347TF RR4(PB) Raphanus raphanistrum subsp. la... 36 2.0 4
(EJ295010) 1095388030531 Global-Ocean-Sampling_GS-27-01-01-1... 32 2.1 4
(BB939390) Trifolium pratense cDNA clone:RCC12802. 32 2.3 3
(CN891069) 010513AAXA002245HT (AAXA) Royal Gala 126 DAFB fru... 46 2.4 2
(AC232863) Solanum lycopersicum chromosome 6 clone C06SLm000... 36 2.4 9
(CN940960) 010914AVBC012044PG (AVBC) Royal Gala young shoot ... 46 2.4 2
(CN870561) 001204AAOA007827HT (AAOA) Royal Gala phloem Malus... 46 2.4 2
(AM457473) Vitis vinifera contig VV78X112028.14, whole genom... 38 2.5 6
(CN892212) 010603AAXA004838HT (AAXA) Royal Gala 126 DAFB fru... 46 2.7 2
(CZ420173) 1015876 RP42 Bos taurus genomic clone RP42-54J04,... 34 2.8 3
(CN892342) 010603AAXA005216HT (AAXA) Royal Gala 126 DAFB fru... 46 2.8 2
(CN941508) 010918AVBC036087PG (AVBC) Royal Gala young shoot ... 46 2.9 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 34 3.0 16
(AC159990) Bos taurus clone CH240-80L23, WORKING DRAFT SEQUE... 36 3.0 5
(AC221474) Bos taurus clone CH240-410D14, WORKING DRAFT SEQU... 38 3.1 9
(CN892338) 010603AAXA005211HT (AAXA) Royal Gala 126 DAFB fru... 46 3.2 2
(CN891806) 010602AAXA003610HT (AAXA) Royal Gala 126 DAFB fru... 46 3.2 2
(FF485170) G708P5103RE6.T0 Acorn worm normalized gastrula pE... 36 3.2 2
(BM166146) EST568669 PyBS Plasmodium yoelii yoelii cDNA clon... 36 3.2 3
(FF478727) G613P6203RH11.T0 Acorn worm blastula/gastrula pCM... 36 3.3 2
(AC114547) Mus musculus chromosome 8, clone RP24-68M15, comp... 36 3.3 2
(AC178376) Strongylocentrotus purpuratus clone R3-3107E2, WO... 36 3.3 2
(AC211791) Macaca mulatta BAC CH250-482K9 (Children's Hospi... 32 3.3 2
(FF468655) G613P6021RG6.T0 Acorn worm blastula/gastrula pCMV... 36 3.4 2
(AC179746) Strongylocentrotus purpuratus clone R3-1018F16, W... 36 3.4 2
(FF468668) G613P6021RH9.T0 Acorn worm blastula/gastrula pCMV... 36 3.4 2
(AC178567) Strongylocentrotus purpuratus clone R3-3025P13, W... 36 3.4 2
(CZ405678) 1001381 RP42 Bos taurus genomic clone RP42-163O02... 34 3.5 3
(AC180573) Strongylocentrotus purpuratus clone R3-3095M18, W... 36 3.5 2
(FE755426) CAYF4362.g3 CAYF Petrolisthes cinctipes heart, wh... 32 3.5 3
(FE755425) CAYF4362.b3 CAYF Petrolisthes cinctipes heart, wh... 32 3.5 3
(FE755324) CAYF4291.g3 CAYF Petrolisthes cinctipes heart, wh... 32 3.5 3
(FE755323) CAYF4291.b3 CAYF Petrolisthes cinctipes heart, wh... 32 3.5 3
(CC574725) CH240_452M23.T7 CHORI-240 Bos taurus genomic clon... 34 3.6 3
(EK273218) 1095462266450 Global-Ocean-Sampling_GS-31-01-01-1... 32 3.6 4
(CZ422703) 1018406 RP42 Bos taurus genomic clone RP42-43K17,... 34 3.7 3
(CL124442) ISB1-85H2_Sp6.1 ISB1 Xenopus (Silurana) tropicali... 32 3.7 4
(DU219176) 1098553709230 CHORI-243 Ovis aries genomic clone ... 38 3.7 2
(FC764470) CBBN14585.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 32 3.9 3
(AC173000) Bos taurus clone CH240-525N10, WORKING DRAFT SEQU... 36 3.9 5
(EK369692) 1095469411698 Global-Ocean-Sampling_GS-31-01-01-1... 32 3.9 4
(FC760050) CBBN11832.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 32 4.2 3
(DU371299) 1098268233743 CHORI-243 Ovis aries genomic clone ... 34 4.2 3
(DU376099) 1098312079652 CHORI-243 Ovis aries genomic clone ... 34 4.4 3
(CR570427) Xenopus tropicalis EST, clone THdA020p16 5'. 32 4.4 3
(EY388516) CAXA7344.fwd CAXA Helobdella robusta Subtracted L... 34 4.4 2
(FF741758) XABT53230.fwd Gateway compatible cien cDNA librar... 32 4.5 2
(FF724866) XABT40618.fwd Gateway compatible cien cDNA librar... 32 4.5 2
(FF800523) XABT93086.fwd Gateway compatible cien cDNA librar... 32 4.5 2
(EY388515) CAXA7344.rev CAXA Helobdella robusta Subtracted L... 34 4.5 2
(FK175810) XABT195938.b1 Gateway compatible cien cDNA librar... 32 4.5 2
(FF730087) XABT44947.fwd Gateway compatible cien cDNA librar... 32 4.5 2
(BY755938) Mus musculus 1 cell embryo 1 cell cDNA, RIKEN ful... 36 4.5 2
(FK043455) XABT97052.b1 Gateway compatible cien cDNA library... 32 4.5 2
(CL140870) ISB1-118B8_Sp6.1 ISB1 Xenopus (Silurana) tropical... 32 4.5 3
(DU381697) 1098313043345 CHORI-243 Ovis aries genomic clone ... 34 4.5 3
(CU513253) Theobroma cacao, mRNA sequence (KZ0ABF10YG14FM1). 42 4.6 2
(CL636519) CH243-5L19.SP6 CHORI-243 Ovis aries genomic clone... 36 4.7 3
(ER858021) PPTGH30TR Solanum tuberosum RHPOTKEY BAC ends Sol... 36 4.7 2
(AC171825) Bos taurus clone CH240-528L19, WORKING DRAFT SEQU... 36 5.2 7
(BB938190) Trifolium pratense cDNA clone:RCC11414. 32 5.3 3
(DU495889) 1098415953144 CHORI-243 Ovis aries genomic clone ... 36 5.6 2
(AC164016) Bos taurus clone CH240-143M5, *** SEQUENCING IN P... 36 5.7 9
(CG754841) P050-2-F05.za Ppa EcoRI BAC Library Pristionchus ... 36 5.7 2
(CL112588) ISB1-57F21_T7.1 ISB1 Xenopus (Silurana) tropicali... 32 6.2 3
(EV157083) 0080945 Brassica napus Bud library Brassica napus... 30 6.6 4
(CU468016) S.lycopersicum DNA sequence from clone LE_HBa-187... 46 6.8 1
(CR382135) Debaryomyces hansenii strain CBS767 chromosome C ... 46 6.8 1
(BX322613) Human DNA sequence from clone RP11-745D9 on chrom... 46 6.8 1
(AL357124) Human DNA sequence from clone RP11-472A16 on chro... 46 6.8 1
(AC026131) Homo sapiens chromosome 11, clone RP11-458M15, co... 46 6.8 1
(AC073925) Homo sapiens chromosome 3 clone RP11-303B19 map 3... 46 6.8 1
(AC069355) Homo sapiens chromosome 3 clone RP11-745D9 map 3,... 46 6.8 1
(CU466420) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.8 1
(CT737373) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.8 1
(AC024975) Homo sapiens chromosome 13 clone RP11-542E15 map ... 46 6.8 1
(EK234988) 1095460196390 Global-Ocean-Sampling_GS-31-01-01-1... 46 6.8 1
(CZ945340) 310915 Tomato EcoRI BAC Library Solanum lycopersi... 46 6.8 1
(CL527106) 80l06rp42.r1 RPCI-42 Bos taurus genomic clone 80l... 46 6.8 1
(CG697121) MUGQ_CH252P002Q4T7_H70_CD314_090 CHORI-252 Vervet... 46 6.8 1
(BH924343) odi55b12.b1 B.oleracea002 Brassica oleracea genom... 46 6.8 1
(EG353656) SAAH-aaa69g04.g1 Agen 0058 Schmidtea mediterranea... 46 6.8 1
(DB336342) Homo sapiens cDNA clone TESTI2005957, 3' end, mRN... 46 6.8 1
(BB981591) Plasmodium berghei str. ANKA cDNA clone: OK011875... 46 6.8 1
(BB981292) Plasmodium berghei str. ANKA cDNA clone: OK011545... 46 6.8 1
(BB974909) Plasmodium berghei str. ANKA cDNA clone: OK004726... 46 6.8 1
(CR954246) Pseudoalteromonas haloplanktis str. TAC125 chromo... 46 6.8 1
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 46 6.8 1
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 40 7.1 14
(EV156994) 0080856 Brassica napus Bud library Brassica napus... 30 7.2 4
(BB933987) Trifolium pratense cDNA clone:RCC06550. 32 7.6 3
(AC187865) Populus trichocarpa clone Pop1-4F12, complete seq... 38 8.0 6
(BZ426126) BONLE84TF BO_1.6_2_KB_tot Brassica oleracea genom... 30 8.0 4
(AC191856) Rhesus Macaque BAC CH250-176F21 () complete sequ... 36 8.4 4
(FM170376) Oryzias latipes EST, clone M066--H8_050. 28 8.7 4
(AC184301) Strongylocentrotus purpuratus clone R3-3038N16, W... 42 9.5 4
(AW659002) 95905 MARC 1BOV Bos taurus cDNA 5', mRNA sequence. 36 9.8 2

>(BJ346691) Dictyostelium discoideum cDNA clone:dda24p14, 3' end,
single read.
Length = 726

Score = 1411 bits (712), Expect = 0.0
Identities = 715/716 (99%)
Strand = Plus / Minus


Query: 1291 cgaattacatttgttagaaggtaatcatgaaattcgtcatgataaagttcatctcctcga 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 cgaattacatttgttagaaggtaatcatgaaattcgtcatgataaagttcatctcctcga 667


Query: 1351 agaacgtggtattagagatggtgtcgttgtaaacttaaatcaaaatccaacctcaaatga 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agaacgtggtattagagatggtgtcgttgtaaacttaaatcaaaatccaacctcaaatga 607


Query: 1411 actcccactcgaattgattccattctatcgtatctatgccctcagtgaacaagaaactcg 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 actcccactcgaattgattccattctatcgtatctatgccctcagtgaacaagaaactcg 547


Query: 1471 tgcaatcgcaccaccacaagtacctggtgaacataatcatcatcatggccatcaactcga 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgcaatcgcaccaccacaagtacctggtgaacataatcatcatcatggccatcaactcga 487


Query: 1531 acttaaaccattggctttcaaaattatcactcaagagaatgaagagaaagcttattcaaa 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acttaaaccattggctttcaaaattatcactcaagagaatgaagagaaagcttattcaaa 427


Query: 1591 tttggttcaagcactcaaaggtaaacttgcttcttatccaaccactttagaagaggatga 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tttggttcaagcactcaaaggtaaacttgcttcttatccaaccactttagaagaggatga 367


Query: 1651 acaagaattgaaaaagaatccacctgcaaatcaaagattcattttatacactaaaatcaa 1710
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acaagaattgaaaaagactccacctgcaaatcaaagattcattttatacactaaaatcaa 307


Query: 1711 tgaaaagaaaattttagatagaaatatcaaatatcttgaatctttaattaaaaaaggtgt 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgaaaagaaaattttagatagaaatatcaaatatcttgaatctttaattaaaaaaggtgt 247


Query: 1771 tatgaatgttaccttcaaattaccagaattagttgaacatactgaacatgctaatcatga 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tatgaatgttaccttcaaattaccagaattagttgaacatactgaacatgctaatcatga 187


Query: 1831 tcatgaacatggtgataattgtaatcatgaagatcatggtagtcatggtcattctcatgg 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tcatgaacatggtgataattgtaatcatgaagatcatggtagtcatggtcattctcatgg 127


Query: 1891 tggtgatgatagtcatggtcactctcatggtggtaatgataatcataatcattcacatgg 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tggtgatgatagtcatggtcactctcatggtggtaatgataatcataatcattcacatgg 67


Query: 1951 tggtcatggtcattcacatcaacatggtgcaaattgtaaccattaaataaacaatc 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tggtcatggtcattcacatcaacatggtgcaaattgtaaccattaaataaacaatc 11

Score = 959 bits (484), Expect = 0.0
Identities = 487/488 (99%)
Strand = Plus / Minus


Query: 2019 ccatcaactcgaacttaaaccattggctttcaaaattatcactcaagagaatgaagagaa 2078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccatcaactcgaacttaaaccattggctttcaaaattatcactcaagagaatgaagagaa 439


Query: 2079 agcttattcaaatttggttcaagcactcaaaggtaaacttgcttcttatccaaccacttt 2138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agcttattcaaatttggttcaagcactcaaaggtaaacttgcttcttatccaaccacttt 379


Query: 2139 agaagaggatgaacaagaattgaaaaagaatccacctgcaaatcaaagattcattttata 2198
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 agaagaggatgaacaagaattgaaaaagactccacctgcaaatcaaagattcattttata 319


Query: 2199 cactaaaatcaatgaaaagaaaattttagatagaaatatcaaatatcttgaatctttaat 2258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cactaaaatcaatgaaaagaaaattttagatagaaatatcaaatatcttgaatctttaat 259


Query: 2259 taaaaaaggtgttatgaatgttaccttcaaattaccagaattagttgaacatactgaaca 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 taaaaaaggtgttatgaatgttaccttcaaattaccagaattagttgaacatactgaaca 199


Query: 2319 tgctaatcatgatcatgaacatggtgataattgtaatcatgaagatcatggtagtcatgg 2378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tgctaatcatgatcatgaacatggtgataattgtaatcatgaagatcatggtagtcatgg 139


Query: 2379 tcattctcatggtggtgatgatagtcatggtcactctcatggtggtaatgataatcataa 2438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tcattctcatggtggtgatgatagtcatggtcactctcatggtggtaatgataatcataa 79


Query: 2439 tcattcacatggtggtcatggtcattcacatcaacatggtgcaaattgtaaccattaaat 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tcattcacatggtggtcatggtcattcacatcaacatggtgcaaattgtaaccattaaat 19


Query: 2499 aaacaatc 2506
||||||||
Sbjct: 18 aaacaatc 11

Score = 54.0 bits (27), Expect(2) = 3e-04
Identities = 48/55 (87%)
Strand = Plus / Minus


Query: 2370 tagtcatggtcattctcatggtggtgatgatagtcatggtcactctcatggtggt 2424
|||||||||||| |||||||||||| |||||| |||| ||| || |||||||||
Sbjct: 117 tagtcatggtcactctcatggtggtaatgataatcataatcattcacatggtggt 63

Score = 54.0 bits (27), Expect(2) = 3e-04
Identities = 48/55 (87%)
Strand = Plus / Minus


Query: 1900 tagtcatggtcactctcatggtggtaatgataatcataatcattcacatggtggt 1954
|||||||||||| |||||||||||| |||||| |||| ||| || |||||||||
Sbjct: 147 tagtcatggtcattctcatggtggtgatgatagtcatggtcactctcatggtggt 93

Score = 32.2 bits (16), Expect(2) = 3e-04
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 2365 catggtagtcatggtcattc 2384
|||||| |||||||||||||
Sbjct: 71 catggtggtcatggtcattc 52

Score = 32.2 bits (16), Expect(2) = 3e-04
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 1946 catggtggtcatggtcattc 1965
|||||| |||||||||||||
Sbjct: 152 catggtagtcatggtcattc 133

Score = 54.0 bits (27), Expect = 0.028
Identities = 48/55 (87%)
Strand = Plus / Minus


Query: 1870 tagtcatggtcattctcatggtggtgatgatagtcatggtcactctcatggtggt 1924
|||||||||||| |||||||||||| |||||| |||| ||| || |||||||||
Sbjct: 117 tagtcatggtcactctcatggtggtaatgataatcataatcattcacatggtggt 63

Score = 54.0 bits (27), Expect = 0.028
Identities = 48/55 (87%)
Strand = Plus / Minus


Query: 2400 tagtcatggtcactctcatggtggtaatgataatcataatcattcacatggtggt 2454
|||||||||||| |||||||||||| |||||| |||| ||| || |||||||||
Sbjct: 147 tagtcatggtcattctcatggtggtgatgatagtcatggtcactctcatggtggt 93

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 3,075,952,543
Number of extensions: 184214715
Number of successful extensions: 15551310
Number of sequences better than 10.0: 295
Length of query: 2662
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2637
Effective length of database: 96,311,147,814
Effective search space: 253972496785518
Effective search space used: 253972496785518
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.17
Homology vs Protein
Query= Contig-U15581-1 (Contig-U15581-1Q) /CSM_Contig/Contig-U15581-1Q.Seq.d
(2662 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC135194_1(BC135194|pid:none) Xenopus tropicalis hypothetical pr... 189 6e-46
CR760640_1(CR760640|pid:none) Xenopus tropicalis finished cDNA, ... 187 2e-45
BC055261_1(BC055261|pid:none) Danio rerio SET domain containing ... 187 2e-45
BC155278_1(BC155278|pid:none) Danio rerio SET domain containing ... 185 7e-45
BC142995_1(BC142995|pid:none) Homo sapiens SET domain containing... 184 1e-44
(Q91WC0) RecName: Full=SET domain-containing protein 3; AltName:... 184 2e-44
AK011993_1(AK011993|pid:none) Mus musculus 10 days embryo whole ... 183 3e-44
BC089108_1(BC089108|pid:none) Rattus norvegicus SET domain conta... 162 5e-38
AL359581_1(AL359581|pid:none) Homo sapiens mRNA; cDNA DKFZp761E1... 130 2e-28
AE014298_1015(AE014298|pid:none) Drosophila melanogaster chromos... 119 6e-25
AL583892_2(AL583892|pid:none) Mouse DNA sequence from clone RP23... 119 8e-25
BC066931_1(BC066931|pid:none) Homo sapiens SET domain containing... 116 5e-24
BC120967_1(BC120967|pid:none) Homo sapiens SET domain containing... 116 5e-24
BC120968_1(BC120968|pid:none) Homo sapiens SET domain containing... 116 5e-24
AK243615_1(AK243615|pid:none) Oryza sativa Japonica Group cDNA, ... 114 1e-23
BT064084_1(BT064084|pid:none) Zea mays full-length cDNA clone ZM... 114 2e-23
CP001141_267(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 105 7e-21
AK029403_1(AK029403|pid:none) Mus musculus 0 day neonate head cD... 103 3e-20
(P94026) RecName: Full=Ribulose-1,5 bisphosphate carboxylase/oxy... 99 1e-18
AM439109_1(AM439109|pid:none) Vitis vinifera contig VV78X215866.... 94 3e-17
AF071544_1(AF071544|pid:none) Spinacia oleracea ribulose-1,5-bis... 91 5e-17
(Q9XI84) RecName: Full=Probable ribulose-1,5 bisphosphate carbox... 91 2e-16
AK103602_1(AK103602|pid:none) Oryza sativa Japonica Group cDNA c... 91 2e-16
AC024859_2(AC024859|pid:none) Caenorhabditis elegans cosmid Y71H... 88 2e-15
AF071543_1(AF071543|pid:none) Spinacia oleracea ribulose-1,5-bis... 86 2e-15
BC046855_1(BC046855|pid:none) Xenopus laevis similar to chromoso... 87 2e-15
AY085096_1(AY085096|pid:none) Arabidopsis thaliana clone 12942 m... 83 5e-14
BT038715_1(BT038715|pid:none) Zea mays full-length cDNA clone ZM... 83 6e-14
EU973006_1(EU973006|pid:none) Zea mays clone 391548 ribulose-1,5... 82 1e-13
AF058800_1(AF058800|pid:none) Arabidopsis thaliana putative meth... 80 3e-13
CP001331_378(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 80 5e-13
AP008214_600(AP008214|pid:none) Oryza sativa (japonica cultivar-... 79 1e-12
AC068197_25(AC068197|pid:none) Genomic sequence for Arabidopsis ... 78 2e-12
CU928180_670(CU928180|pid:none) Kluyveromyces thermotolerans str... 78 2e-12
BC057968_1(BC057968|pid:none) Mus musculus SET domain containing... 77 3e-12
BX005416_4(BX005416|pid:none) Zebrafish DNA sequence from clone ... 77 3e-12
AL672016_4(AL672016|pid:none) Zebrafish DNA sequence from clone ... 77 3e-12
AM494967_17(AM494967|pid:none) Leishmania braziliensis chromosom... 76 7e-12
EF677525_1(EF677525|pid:none) Picea sitchensis clone WS02770_B21... 75 1e-11
AY811444_1(AY811444|pid:none) Schistosoma japonicum SJCHGC02590 ... 75 1e-11
CP001576_337(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 75 2e-11
(P58467) RecName: Full=SET domain-containing protein 4; &AY0378... 70 3e-10
CU928179_305(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 69 9e-10
AJ720687_1(AJ720687|pid:none) Gallus gallus mRNA for hypothetica... 68 2e-09
AC138464_10(AC138464|pid:none) Medicago truncatula clone mth2-29... 67 3e-09
BT020357_1(BT020357|pid:none) Arabidopsis thaliana At2g18850 gen... 67 4e-09
BT004057_1(BT004057|pid:none) Arabidopsis thaliana clone RAFL15-... 67 4e-09
AY088409_1(AY088409|pid:none) Arabidopsis thaliana clone 6503 mR... 66 6e-09
BT020257_1(BT020257|pid:none) Arabidopsis thaliana At3g55080 gen... 65 1e-08
(Q12504) RecName: Full=Ribosomal N-lysine methyltransferase 4; ... 65 1e-08
CT005267_16(CT005267|pid:none) Leishmania major strain Friedlin,... 64 2e-08
CU928169_89(CU928169|pid:none) Kluyveromyces thermotolerans stra... 63 6e-08
AM432704_1(AM432704|pid:none) Vitis vinifera contig VV78X264291.... 63 6e-08
AE016817_637(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 63 6e-08
CP001325_115(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 62 8e-08
FJ362353_8(FJ362353|pid:none) Caenorhabditis brenneri contig JD0... 62 1e-07
BC002898_1(BC002898|pid:none) Homo sapiens SET domain containing... 62 1e-07
BC036556_1(BC036556|pid:none) Homo sapiens SET domain containing... 62 1e-07
BT046244_1(BT046244|pid:none) Salmo salar clone ssal-rgb-544-106... 61 2e-07
CR382125_12(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 60 3e-07
Z46237_1(Z46237|pid:none) Saccharomyces cerevisiae RMS1 gene for... 60 3e-07
AY074312_1(AY074312|pid:none) Arabidopsis thaliana unknown prote... 59 7e-07
CR954214_23(CR954214|pid:none) Ostreococcus tauri strain OTTH059... 59 9e-07
AM920435_1191(AM920435|pid:none) Penicillium chrysogenum Wiscons... 59 9e-07
AK176519_1(AK176519|pid:none) Arabidopsis thaliana mRNA, complet... 58 2e-06
CP000595_179(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 58 2e-06
AM270333_14(AM270333|pid:none) Aspergillus niger contig An15c006... 57 4e-06
AM920437_673(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 57 4e-06
CR954203_407(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 57 5e-06
(Q803K4) RecName: Full=SET domain-containing protein 6; &BC0444... 57 5e-06
AY042836_1(AY042836|pid:none) Arabidopsis thaliana Unknown prote... 56 8e-06
FM992692_297(FM992692|pid:none) Candida dubliniensis CD36 chromo... 55 1e-05
AF388528_1(AF388528|pid:none) Rattus norvegicus hypothetical pro... 54 2e-05
CP001328_476(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 54 2e-05
FN357416_21(FN357416|pid:none) Schistosoma mansoni genome sequen... 53 5e-05
AE016818_122(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 53 5e-05
AE014296_322(AE014296|pid:none) Drosophila melanogaster chromoso... 53 5e-05
CP001326_264(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 53 7e-05
CR382131_1432(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 52 1e-04
EU970739_1(EU970739|pid:none) Zea mays clone 349766 SET domain c... 51 3e-04
AM270251_21(AM270251|pid:none) Aspergillus niger contig An11c034... 50 4e-04
AP003806_6(AP003806|pid:none) Oryza sativa Japonica Group genomi... 50 4e-04
CP000595_3(CP000595|pid:none) Ostreococcus lucimarinus CCE9901 c... 50 6e-04
CP000583_447(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 50 6e-04
AC013353_10(AC013353|pid:none) Trypanosoma brucei chromosome 6 c... 50 6e-04
AK121645_1(AK121645|pid:none) Oryza sativa Japonica Group cDNA c... 49 0.001
CP001332_8(CP001332|pid:none) Micromonas sp. RCC299 chromosome 1... 49 0.001
AP003228_5(AP003228|pid:none) Oryza sativa Japonica Group genomi... 48 0.002
DQ531595_1(DQ531595|pid:none) Karenia brevis putative ribulose-1... 48 0.002
CU928173_235(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 48 0.002
AM270079_7(AM270079|pid:none) Aspergillus niger contig An04c0180... 48 0.002
AC139314_5(AC139314|pid:none) Medicago truncatula clone mth2-24j... 47 0.004
BT035695_1(BT035695|pid:none) Zea mays full-length cDNA clone ZM... 47 0.005
CR380959_385(CR380959|pid:none) Candida glabrata strain CBS138 c... 47 0.005
CU928175_556(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 47 0.005
AC159455_10(AC159455|pid:none) Trypanosoma brucei chromosome 5 c... 46 0.006
AC003673_4(AC003673|pid:none) Arabidopsis thaliana chromosome 2 ... 46 0.008
BC135640_1(BC135640|pid:none) Xenopus tropicalis hypothetical pr... 46 0.008
(Q6INM2) RecName: Full=SET domain-containing protein 6; &BC0722... 46 0.008
(Q9P6L2) RecName: Full=SET domain-containing protein C688.14; &... 45 0.011
CR382132_1165(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 45 0.011
CR382133_104(CR382133|pid:none) Debaryomyces hansenii strain CBS... 45 0.014
CP000587_67(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 44 0.031
CR382122_96(CR382122|pid:none) Kluyveromyces lactis strain NRRL ... 44 0.040
CR954216_226(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 44 0.040
CP000497_476(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 44 0.040
CU633865_286(CU633865|pid:none) Podospora anserina genomic DNA c... 43 0.052
A86151(A86151) hypothetical protein F22M8.5 - Arabidopsis thalia... 43 0.052
CP000597_5(CP000597|pid:none) Ostreococcus lucimarinus CCE9901 c... 43 0.068
FN392322_717(FN392322|pid:none) Pichia pastoris GS115 chromosome... 43 0.068
CP001329_588(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 42 0.089
CU928180_170(CU928180|pid:none) Kluyveromyces thermotolerans str... 42 0.12
CP000587_450(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.15
CP001325_355(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 40 0.34
AL163972_22(AL163972|pid:none) Arabidopsis thaliana DNA chromoso... 40 0.34
AK075597_1(AK075597|pid:none) Mus musculus adult male kidney cDN... 40 0.34
CP001327_652(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 40 0.44
CP000591_109(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.58
CP001334_98(CP001334|pid:none) Micromonas sp. RCC299 chromosome ... 39 0.76
CR954211_169(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 39 0.76
CR954211_118(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 39 0.76
(Q08961) RecName: Full=Ribosomal N-lysine methyltransferase 1; ... 39 0.99
FN392320_550(FN392320|pid:none) Pichia pastoris GS115 chromosome... 39 1.3
AC139314_4(AC139314|pid:none) Medicago truncatula clone mth2-24j... 38 1.7
CR954215_248(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 38 1.7
AF034802_1(AF034802|pid:none) Homo sapiens liprin-beta1 mRNA, co... 38 2.2
AK173133_1(AK173133|pid:none) Mus musculus mRNA for mKIAA1230 pr... 37 2.9
AM494970_97(AM494970|pid:none) Leishmania braziliensis chromosom... 37 3.8
(O14135) RecName: Full=SET domain-containing protein 8; &CU3296... 37 4.9
CP001323_158(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 36 6.4
(A3DDI1) RecName: Full=tRNA delta(2)-isopentenylpyrophosphate tr... 36 6.4
CP001323_253(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 36 6.4
U28735_1(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, c... 36 8.4
CP001047_563(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 36 8.4

>BC135194_1(BC135194|pid:none) Xenopus tropicalis hypothetical protein
LOC549331, mRNA (cDNA clone IMAGE:7587980), partial cds.
Length = 507

Score = 189 bits (479), Expect = 6e-46
Identities = 125/397 (31%), Positives = 208/397 (52%), Gaps = 4/397 (1%)
Frame = +2

Query: 563 LIETHQRVLGLVATQDIKEGEDFVEIPSNLFITTAVAFQGLGKPPILENDRLIQSIPGIL 742
L+E + GL AT++IK E F+ +P L +T A +G P+ DR++Q++ I
Sbjct: 23 LVEFPEEGFGLKATREIKAEELFLWVPRKLLMTVESA-KGSVLGPLYSQDRILQAMGNIT 81

Query: 743 LSIFLVKELSNPTSEWGPYIKLLPKQYNTVYYWGLKEFTQFRGSPNLEYAMRYVRGAMRQ 922
L+ L+ E ++P S W PYIK LP +Y+T Y+ E + + + + RQ
Sbjct: 82 LAFHLLCERADPNSFWLPYIKTLPNEYDTPLYFNEDEVQYLQSTQAILDVFSQYKNTARQ 141

Query: 923 YCYLYSMID-RTQSNIMPIS-SFTWDAFVWAISTVQSRQNPVYAGNGNGSIMALIPFWDF 1096
Y Y Y +I +N +P+ SFT+D + WA+S+V +RQN + +G+ +ALIP WD
Sbjct: 142 YAYFYKVIQTHPNANKLPLKDSFTFDDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDM 201

Query: 1097 CNHSSTGSKITSFYHMDSNCMTSGAIKDFKKGEQVYMFYGPRDNTQLLMHAGFATKTNLH 1276
CNH T S IT+ Y+++ + A++DFK GEQ+Y+FYG R N + ++H GF + NLH
Sbjct: 202 CNH--TNSLITTGYNLEDDRCECVALQDFKSGEQIYIFYGTRSNAEFVIHNGFFFENNLH 259

Query: 1277 DSYPFELHLLEGNHEIRHDKVHLLEERGIRDGVVVNLNQNPTSNELPLELIPFYRIYALS 1456
D +L + + + + K +L GI V L + T + +L+ F R++ ++
Sbjct: 260 DRVKIKLGVSKSD-RLYAMKAEVLARAGIPTSSVFAL--HVTEPPISAQLLAFLRVFCMN 316

Query: 1457 EQETRAIAPPQVPGEHNHHHGHQLELKPLAFKIITQENEEKAYSNLVQALKGKLASYPTT 1636
E E + + G+H L ++ ENE K ++ L L +Y TT
Sbjct: 317 EDELKG----HLIGDHAIDKIFTLGNSEFP---VSWENEIKLWTFLEARASLLLKTYKTT 369

Query: 1637 LEEDEQELKKNPPANQRFILYTKIN--EKKILDRNIK 1741
+E+D + L++ P + K+ EK+IL++ +K
Sbjct: 370 VEDDNKVLEQ-PDMTFHSAMAIKLRRVEKEILEKALK 405

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,837,463,826
Number of extensions: 76138417
Number of successful extensions: 192948
Number of sequences better than 10.0: 134
Number of HSP's gapped: 192096
Number of HSP's successfully gapped: 158
Length of query: 887
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 749
Effective length of database: 604,535,722
Effective search space: 452797255778
Effective search space used: 452797255778
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.48 gvh: -0.06 alm: 0.92 top: 0.53 tms: 0.00 mit: 0.37 mip: 0.00
nuc: 0.61 erl: 0.00 erm: 0.80 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

76.0 %: nuclear
16.0 %: cytoplasmic
8.0 %: mitochondrial

>> prediction for Contig-U15581-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 17
AH (FL, L) 1
AF (FL, S) 17
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 6
CH (FL, L) 2
CF (FL, S) 5
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0