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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U15573-1
Contig ID Contig-U15573-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U15573-1 (Contig-U15573-1Q) /CSM_Contig/Contig-U15573-1Q.Seq.d
AGTCTTGAGCTTTTATTGGGTCAACCATTGGGTGAATATACATCTATCTC
AAACGTTTCCATCTATTTCTTTAATCCAAAAGATATTACCAATCCAAATG
GTAATTCAAGATATTTCCAATACTCAAACAAACCACCATTATATATGAAA
ACTTTTAGTGGTGCTAATTTCATATCCAATTCCAATTTCATCAAAACAAG
TATAACATTTTCACCAACTAAAGATATTGGCTCTGCTGTTTTTGCACTTC
AAATTAATCGTACTGCTGCTCTTACTGGTCCAAGTGAGATTTCAATTAGT
ATTAAAGATATGAAATTTACAATTTTACCAAAAACAATTACACAACCAAC
TCTTCTTATTAAAGATTCAGAATTAGTTAATCTTCCCAAACCATCTACTT
CTTTTGATCCACAAGATTCTTCAACATGTCCATATCTCGCAAATGATTTA
GTTCATTGGCATAATCCTTCAACTTGGCCAAATGGTATCATTCCATCACC
ATCATCAAATATTACTTTACCAGAAGGTAAAAAAGTTTTAATTTCACCAT
GTTCAATATCACAAACTCAAGTTTACAAATGGATAAAAGTTTCATCAACA
AGTGAACTTATTTTCGCTGATTCTCCAATGGATTTCCATGTTAAAGATAT
TTATGTTGAGGGTAAGTTTATAATGGGTACTACAAAATGTAGATATAATT
CTAAAATCAATATAATATTCCATGGTGAAAAAACATTATCAGACACGATC
TCTCAGTATTATGGATCTAAAGGTATTGCTGTTGCTTCTGGTGGTTTCAT
TAGTGTTCAAGGTAAACAATATCATAATACTTGGAGTAAACTTTCTGCAT
CAGCTTGGAGTGGTGATTATGTTATTTATGTTCAAGATTCAATTAATTGG
GAAGTTGGTCAACAAGTTTTAATTACAACTAGTGTATATAGAGATGAATC
TGATAACCAAAATGAAGTTATGACAATTGCAGCTATTCAAGGTAAAGTTA
TTCAATTTACCAAACCACTTAGATATTATCATTATGGTGGTCAAGAATAT
CAAGCTGAAGTTGCATTACTTTCAAGAAGAATTGTTTTTAGAGGTGATGG
TAATGGTCAGGAACAAACTGATTCTCAATCATTTGGTGGTCATGTATTAG
TAAATGGTGAAGGTCAATTCTCTGGTATTCAATTAATTCGTATGGGTCAA
ACTAATATAAAAGCAAGATACCCACTTCACTATCATTTAGCAGGTACAGT
TAAAAACTCTTATATCTCTGATTGTTCAGTAACTAATAGTTATTATCGTT
GTTATACAATTCATGGAACAAATAATGTCAGTCTAGTCCGTAATGTTGCT
TTTGATATTCGTGGTCATTGTTATTATTTAGAAGATGGTGTTTGAAGTTG
ATAATAACATTTGGTTCAATTTTGCTTCATATGTACATCCAATTGGAAAG
CCAGCTGGTGGTCCAAGTCAAACTGGTGAAATTTTCCAACAATCTGACTC
ATTAACCCAACCAGCTGATTCAGCTGCTGGGTGTTATTATATAACAAATG
CATATAACTCTTTGGTTGGTAATGCTGCAAGTGGAGGTTGGAGTGGTTTT
GCTTCCCAAATTTGGATAAGCCAATTGGTAATCATAGAACAATTTCAATT
ATACCATCACAATTTCCATTAAAAGAATTTACAGGTAATACAGCACATAG
TAGTGGTTATTATTTTGAAGAAGGTGGTTCAATTTATGTTGGTGGTAATC
TTACATTTAATGAAGCAACTCAACTTTTAACCTATAATAGTGGTAGATTT
TCAAGATCAACCTATTACAATGGTACTAAAAAAGATGGAAATGAAAGATG
GATGAGATTTAACAATACTAAA----------GGAANAACAAATTCNATT
NCNACTTTGNATTGGCNAACTCTGCCNCTGAANTTAAAAATGGNAATGGG
ACNANANATTATTTCGATCNAACNCNTCNCTTTANCNAANCNGNNAANTT
AGCNTTAACNGGNAA
Gap gap included
Contig length 2005
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 5020093
End point 5018210
Strand (PLUS/MINUS) MINUS
Number of clones 13
Number of EST 13
Link to clone list U15573
List of clone(s) 

est1=VHC559F,1,587
est2=VHJ279F,41,624
est3=VHF677F,167,654
est4=VHH101F,515,1037
est5=FC-IC0898E,679,1236
est6=FC-IC0899F,679,1236
est7=FC-IC0899Z,679,1171
est8=VHN473F,762,1367
est9=AHH146F,878,1542
est10=CFE728F,878,1342
est11=AFE171F,892,1871
est12=CHI824F,907,1523
est13=AFE171Z,1873,2005
Translated Amino Acid sequence 
slelllgqplgeytsisnvsiyffnpkditnpngnsryfqysnkpplymktfsganfisn
snfiktsitfsptkdigsavfalqinrtaaltgpseisisikdmkftilpktitqptlli
kdselvnlpkpstsfdpqdsstcpylandlvhwhnpstwpngiipspssnitlpegkkvl
ispcsisqtqvykwikvsstselifadspmdfhvkdiyvegkfimgttkcrynskiniif
hgektlsdtisqyygskgiavasggfisvqgkqyhntwsklsasawsgdyviyvqdsinw
evgqqvlittsvyrdesdnqnevmtiaaiqgkviqftkplryyhyggqeyqaevallsrr
ivfrgdgngqeqtdsqsfgghvlvngegqfsgiqlirmgqtnikaryplhyhlagtvkns
yisdcsvtnsyyrcytihgtnnvslvrnvafdirghcyyledgv*s***hlvqfcficts
nwkaswwsksnw*nfpti*linpts*fscwvllynkci*lfgw*CCKWRLEWFCFPNLDK
PIGNHRTISIIPSQFPLKEFTGNTAHSSGYYFEEGGSIYVGGNLTFNEATQLLTYNSGRF
SRSTYYNGTKKDGNERWMRFNNTK---

---XNKFXXXFXLANSAXEXKNGNGTXXYFDXTXXFXXXXXLALTG
Translated Amino Acid sequence (All Frames) 
Frame A:
slelllgqplgeytsisnvsiyffnpkditnpngnsryfqysnkpplymktfsganfisn
snfiktsitfsptkdigsavfalqinrtaaltgpseisisikdmkftilpktitqptlli
kdselvnlpkpstsfdpqdsstcpylandlvhwhnpstwpngiipspssnitlpegkkvl
ispcsisqtqvykwikvsstselifadspmdfhvkdiyvegkfimgttkcrynskiniif
hgektlsdtisqyygskgiavasggfisvqgkqyhntwsklsasawsgdyviyvqdsinw
evgqqvlittsvyrdesdnqnevmtiaaiqgkviqftkplryyhyggqeyqaevallsrr
ivfrgdgngqeqtdsqsfgghvlvngegqfsgiqlirmgqtnikaryplhyhlagtvkns
yisdcsvtnsyyrcytihgtnnvslvrnvafdirghcyyledgv*s***hlvqfcficts
nwkaswwsksnw*nfpti*linpts*fscwvllynkci*lfgw*CCKWRLEWFCFPNLDK
PIGNHRTISIIPSQFPLKEFTGNTAHSSGYYFEEGGSIYVGGNLTFNEATQLLTYNSGRF
SRSTYYNGTKKDGNERWMRFNNTK---

---gxtnsixtlxwxtlplxlkmxmgxxiisixxxxlxxxxx*x*xx

Frame B:
vlsfywvnhwvnihlsqtfpsisliqkilpiqmviqdisntqtnhhyi*kllvvlisypi
pisskqv*hfhqlkilallflhfklivlllllvqvrfqlvlki*nlqfyqkqlhnqlfll
kiqn*lifpnhllllihkilqhvhisqmi*figiilqlgqmvsfhhhhqillyqkvkkf*
fhhvqyhklkftng*kfhqqvnlfslilqwismlkifmlrvsl*wvlqnvdiilksi*ys
mvkkhyqtrslsimdlkvlllllvvslvfkvnniiilgvnflhqlgvvimlfmfkiqlig
klvnkf*lqlvyiemnlitkmkl*qlqlfkvklfnlpnhldiiimvvkniklklhyfqee
lflevmvmvrnklilnhlvvmy**mvkvnslvfn*fvwvkli*kqdthftii*qvqlktl
islivq*liviivviqfmeqimsv*svmlllifvvivii*kmvfevdnniwfnfasyvhp
igkpaggpsqtgeifqqsdsltqpadsaagcyyitnaynslvgnaasggwsgfasqiwis
qlviieqfqlyhhnfh*knlqviqhivvviilkkvvqfmlvvilhlmkqlnf*piivvdf
qdqpitmvlkkmemkdg*dltil---

---exqixxxlxigxlcx*x*kwxwdxxlfrsnxslxxxxxxsxnxx

Frame C:
s*afigstig*iyiylkrfhlfl*skryyqskw*fkifpilkqttiiyenf*wc*fhiqf
qfhqnkyniftn*rywlccfctsn*syccsywsk*dfn*y*ryeiynftknnyttnssy*
rfris*ssqtiyff*strffnmsisrk*fssla*sfnlakwyhsitiikyyftrr*ksfn
ftmfnitnsslqmdksfink*tyfr*fsngfpc*rylc*g*vyngyykm*i*f*nqynip
w*kniirhdlsvlwi*rycccfwwfh*csr*tis*yle*tfcislew*lcylcsrfn*lg
swstsfnyn*ci*r*i**pk*sydncsysr*sysiyqtt*ilslwwsriss*scitfkkn
cf*r*w*wsgtn*fsiiwwsciskw*rsilwysinsygsn*ykskiptslsfsrys*kll
yl*lfsn**llsllynswnk*cqssp*ccf*yswslllfrrwclkliitfgsillhmyiq
lesqlvvqvklvkfsnnlth*pnqliqllgvii*qmhitlwlvmlqvevgvvllpkfg*a
nw*s*nnfnytitisikriyr*yst**wllf*rrwfnlcww*syi**snstfnl**w*if
kinllqwy*krwk*kmdei*qy*---

---XNKFXXXFXLANSAXEXKNGNGTXXYFDXTXXFXXXXXLALTG
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U15573-1 (Contig-U15573-1Q)
/CSM_Contig/Contig-U15573-1Q.Seq.d
         (2015 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15573-1 (Contig-U15573-1Q) /CSM_Contig/Conti...  3780  0.0
Contig-U15481-1 (Contig-U15481-1Q) /CSM_Contig/Conti...   121  4e-27
Contig-U15981-1 (Contig-U15981-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U12917-1 (Contig-U12917-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U12323-1 (Contig-U12323-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U14726-1 (Contig-U14726-1Q) /CSM_Contig/Conti...    38  0.052
Contig-U14489-1 (Contig-U14489-1Q) /CSM_Contig/Conti...    38  0.052
Contig-U11452-1 (Contig-U11452-1Q) /CSM_Contig/Conti...    38  0.052
Contig-U06697-1 (Contig-U06697-1Q) /CSM_Contig/Conti...    38  0.052
Contig-U04773-1 (Contig-U04773-1Q) /CSM_Contig/Conti...    38  0.052

>Contig-U15573-1 (Contig-U15573-1Q) /CSM_Contig/Contig-U15573-1Q.Seq.d
          Length = 2015

 Score = 3780 bits (1907), Expect = 0.0
 Identities = 2009/2009 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtcttgagcttttattgggtcaaccattgggtgaatatacatctatctcaaacgtttcc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agtcttgagcttttattgggtcaaccattgggtgaatatacatctatctcaaacgtttcc 60

                                                                        
Query: 61   atctatttctttaatccaaaagatattaccaatccaaatggtaattcaagatatttccaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atctatttctttaatccaaaagatattaccaatccaaatggtaattcaagatatttccaa 120

                                                                        
Query: 121  tactcaaacaaaccaccattatatatgaaaacttttagtggtgctaatttcatatccaat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tactcaaacaaaccaccattatatatgaaaacttttagtggtgctaatttcatatccaat 180

                                                                        
Query: 181  tccaatttcatcaaaacaagtataacattttcaccaactaaagatattggctctgctgtt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tccaatttcatcaaaacaagtataacattttcaccaactaaagatattggctctgctgtt 240

                                                                        
Query: 241  tttgcacttcaaattaatcgtactgctgctcttactggtccaagtgagatttcaattagt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tttgcacttcaaattaatcgtactgctgctcttactggtccaagtgagatttcaattagt 300

                                                                        
Query: 301  attaaagatatgaaatttacaattttaccaaaaacaattacacaaccaactcttcttatt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  attaaagatatgaaatttacaattttaccaaaaacaattacacaaccaactcttcttatt 360

                                                                        
Query: 361  aaagattcagaattagttaatcttcccaaaccatctacttcttttgatccacaagattct 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aaagattcagaattagttaatcttcccaaaccatctacttcttttgatccacaagattct 420

                                                                        
Query: 421  tcaacatgtccatatctcgcaaatgatttagttcattggcataatccttcaacttggcca 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tcaacatgtccatatctcgcaaatgatttagttcattggcataatccttcaacttggcca 480

                                                                        
Query: 481  aatggtatcattccatcaccatcatcaaatattactttaccagaaggtaaaaaagtttta 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  aatggtatcattccatcaccatcatcaaatattactttaccagaaggtaaaaaagtttta 540

                                                                        
Query: 541  atttcaccatgttcaatatcacaaactcaagtttacaaatggataaaagtttcatcaaca 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  atttcaccatgttcaatatcacaaactcaagtttacaaatggataaaagtttcatcaaca 600

                                                                        
Query: 601  agtgaacttattttcgctgattctccaatggatttccatgttaaagatatttatgttgag 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  agtgaacttattttcgctgattctccaatggatttccatgttaaagatatttatgttgag 660

                                                                        
Query: 661  ggtaagtttataatgggtactacaaaatgtagatataattctaaaatcaatataatattc 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  ggtaagtttataatgggtactacaaaatgtagatataattctaaaatcaatataatattc 720

                                                                        
Query: 721  catggtgaaaaaacattatcagacacgatctctcagtattatggatctaaaggtattgct 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  catggtgaaaaaacattatcagacacgatctctcagtattatggatctaaaggtattgct 780

                                                                        
Query: 781  gttgcttctggtggtttcattagtgttcaaggtaaacaatatcataatacttggagtaaa 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  gttgcttctggtggtttcattagtgttcaaggtaaacaatatcataatacttggagtaaa 840

                                                                        
Query: 841  ctttctgcatcagcttggagtggtgattatgttatttatgttcaagattcaattaattgg 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  ctttctgcatcagcttggagtggtgattatgttatttatgttcaagattcaattaattgg 900

                                                                        
Query: 901  gaagttggtcaacaagttttaattacaactagtgtatatagagatgaatctgataaccaa 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  gaagttggtcaacaagttttaattacaactagtgtatatagagatgaatctgataaccaa 960

                                                                        
Query: 961  aatgaagttatgacaattgcagctattcaaggtaaagttattcaatttaccaaaccactt 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  aatgaagttatgacaattgcagctattcaaggtaaagttattcaatttaccaaaccactt 1020

                                                                        
Query: 1021 agatattatcattatggtggtcaagaatatcaagctgaagttgcattactttcaagaaga 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agatattatcattatggtggtcaagaatatcaagctgaagttgcattactttcaagaaga 1080

                                                                        
Query: 1081 attgtttttagaggtgatggtaatggtcaggaacaaactgattctcaatcatttggtggt 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 attgtttttagaggtgatggtaatggtcaggaacaaactgattctcaatcatttggtggt 1140

                                                                        
Query: 1141 catgtattagtaaatggtgaaggtcaattctctggtattcaattaattcgtatgggtcaa 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 catgtattagtaaatggtgaaggtcaattctctggtattcaattaattcgtatgggtcaa 1200

                                                                        
Query: 1201 actaatataaaagcaagatacccacttcactatcatttagcaggtacagttaaaaactct 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 actaatataaaagcaagatacccacttcactatcatttagcaggtacagttaaaaactct 1260

                                                                        
Query: 1261 tatatctctgattgttcagtaactaatagttattatcgttgttatacaattcatggaaca 1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tatatctctgattgttcagtaactaatagttattatcgttgttatacaattcatggaaca 1320

                                                                        
Query: 1321 aataatgtcagtctagtccgtaatgttgcttttgatattcgtggtcattgttattattta 1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aataatgtcagtctagtccgtaatgttgcttttgatattcgtggtcattgttattattta 1380

                                                                        
Query: 1381 gaagatggtgtttgaagttgataataacatttggttcaattttgcttcatatgtacatcc 1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gaagatggtgtttgaagttgataataacatttggttcaattttgcttcatatgtacatcc 1440

                                                                        
Query: 1441 aattggaaagccagctggtggtccaagtcaaactggtgaaattttccaacaatctgactc 1500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 aattggaaagccagctggtggtccaagtcaaactggtgaaattttccaacaatctgactc 1500

                                                                        
Query: 1501 attaacccaaccagctgattcagctgctgggtgttattatataacaaatgcatataactc 1560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 attaacccaaccagctgattcagctgctgggtgttattatataacaaatgcatataactc 1560

                                                                        
Query: 1561 tttggttggtaatgctgcaagtggaggttggagtggttttgcttcccaaatttggataag 1620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tttggttggtaatgctgcaagtggaggttggagtggttttgcttcccaaatttggataag 1620

                                                                        
Query: 1621 ccaattggtaatcatagaacaatttcaattataccatcacaatttccattaaaagaattt 1680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ccaattggtaatcatagaacaatttcaattataccatcacaatttccattaaaagaattt 1680

                                                                        
Query: 1681 acaggtaatacagcacatagtagtggttattattttgaagaaggtggttcaatttatgtt 1740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 acaggtaatacagcacatagtagtggttattattttgaagaaggtggttcaatttatgtt 1740

                                                                        
Query: 1741 ggtggtaatcttacatttaatgaagcaactcaacttttaacctataatagtggtagattt 1800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ggtggtaatcttacatttaatgaagcaactcaacttttaacctataatagtggtagattt 1800

                                                                        
Query: 1801 tcaagatcaacctattacaatggtactaaaaaagatggaaatgaaagatggatgagattt 1860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tcaagatcaacctattacaatggtactaaaaaagatggaaatgaaagatggatgagattt 1860

                                                                        
Query: 1861 aacaatactaaannnnnnnnnnggaanaacaaattcnattncnactttgnattggcnaac 1920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 aacaatactaaannnnnnnnnnggaanaacaaattcnattncnactttgnattggcnaac 1920

                                                                        
Query: 1921 tctgccnctgaanttaaaaatggnaatgggacnananattatttcgatcnaacncntcnc 1980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 tctgccnctgaanttaaaaatggnaatgggacnananattatttcgatcnaacncntcnc 1980

                                         
Query: 1981 tttancnaancngnnaanttagcnttaac 2009
            |||||||||||||||||||||||||||||
Sbjct: 1981 tttancnaancngnnaanttagcnttaac 2009


>Contig-U15481-1 (Contig-U15481-1Q) /CSM_Contig/Contig-U15481-1Q.Seq.d
          Length = 1462

 Score =  121 bits (61), Expect = 4e-27
 Identities = 178/217 (82%)
 Strand = Plus / Plus

                                                                        
Query: 872  ttatttatgttcaagattcaattaattgggaagttggtcaacaagttttaattacaacta 931
            |||||||||||||||||   ||||||||||||||||| |||||||||||||| ||||| |
Sbjct: 1218 ttatttatgttcaagataatattaattgggaagttggccaacaagttttaataacaacaa 1277

                                                                        
Query: 932  gtgtatatagagatgaatctgataaccaaaatgaagttatgacaattgcagctattcaag 991
            ||  || || |||||||   ||||| |||||||||||  | ||||||  | | ||   ||
Sbjct: 1278 gtcaatttaaagatgaaatagataatcaaaatgaagtattaacaattaaatcaatattag 1337

                                                                        
Query: 992  gtaaagttattcaatttaccaaaccacttagatattatcattatggtggtcaagaatatc 1051
            | |||| |||| ||||||| |  ||| ||| || |||||||||||||||  |||||||||
Sbjct: 1338 gaaaagctattgaatttactaccccaattaaattttatcattatggtggcaaagaatatc 1397

                                                 
Query: 1052 aagctgaagttgcattactttcaagaagaattgtttt 1088
            ||||||||||||| ||| | |||||||||||| ||||
Sbjct: 1398 aagctgaagttgctttattatcaagaagaattatttt 1434


 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaagattcagaattagttaatcttcccaaaccatctacttcttttgatccacaagattct 420
           |||||||| |||||| ||||| |||| ||| ||||   ||| || |||||||||||||  
Sbjct: 707 aaagattctgaattaattaatattccaaaagcatccgtttcattagatccacaagattta 766

                                                          
Query: 421 tcaacatgtccatatctcgcaaatgatttagttcattggcataatcc 467
           ||||| |||||||| || ||   ||||||||| ||||||||||||||
Sbjct: 767 tcaacttgtccataccttgcttctgatttagtccattggcataatcc 813


 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                        
Query: 759  ttatggatctaaaggtattgctgttgcttctggtggtttcattagtgttcaaggtaaaca 818
            |||||| |||||||||||||||||  || |||||||||| |||   ||||| ||||||||
Sbjct: 1105 ttatggctctaaaggtattgctgtatctgctggtggttttatttcagttcatggtaaaca 1164

                      
Query: 819  atatcataat 828
            ||| ||||||
Sbjct: 1165 ataccataat 1174


 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                        
Query: 673  atgggtactacaaaatgtagatataattctaaaatcaatataatattccatggtgaaaaa 732
            ||||| |||||||||||| | |||||| |||| || ||||| || |||||||||  ||||
Sbjct: 1019 atgggaactacaaaatgtcgttataatgctaatataaatattattttccatggttcaaaa 1078

               
Query: 733  aca 735
            |||
Sbjct: 1079 aca 1081


>Contig-U15981-1 (Contig-U15981-1Q) /CSM_Contig/Contig-U15981-1Q.Seq.d
          Length = 1617

 Score = 42.1 bits (21), Expect = 0.003
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1848 atggatgagatttaacaatactaaa 1872
            ||||||||||||||| |||||||||
Sbjct: 321  atggatgagatttaataatactaaa 345


 Score = 32.2 bits (16), Expect = 3.2
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                            
Query: 1683 aggtaatacagcacat 1698
            ||||||||||||||||
Sbjct: 149  aggtaatacagcacat 164


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 34,679
Number of Sequences: 8402
Number of extensions: 34679
Number of successful extensions: 3652
Number of sequences better than 10.0: 109
length of query: 2015
length of database: 8,075,542
effective HSP length: 17
effective length of query: 1998
effective length of database: 7,932,708
effective search space: 15849550584
effective search space used: 15849550584
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 2. 1
Homology vs DNA 
Query= Contig-U15573-1 (Contig-U15573-1Q) /CSM_Contig/Contig-U15573-1Q.Seq.d
         (2015 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ366508) Dictyostelium discoideum cDNA clone:ddc39p06, 5' ...  1221   0.0    1
(BJ425989) Dictyostelium discoideum cDNA clone:ddv57b20, 5' ...  1124   0.0    1
(BJ334173) Dictyostelium discoideum cDNA clone:dda45k11, 5' ...  1013   0.0    2
(BJ325098) Dictyostelium discoideum cDNA clone:dda9m17, 5' e...   993   0.0    2
(BJ358589) Dictyostelium discoideum cDNA clone:ddc10h07, 5' ...   882   0.0    2
(BJ419580) Dictyostelium discoideum cDNA clone:ddv36e15, 5' ...   634   0.0    3
(BJ422135) Dictyostelium discoideum cDNA clone:ddv45a01, 5' ...   646   0.0    3
(BJ421493) Dictyostelium discoideum cDNA clone:ddv42i20, 5' ...   688   0.0    1
(BJ423642) Dictyostelium discoideum cDNA clone:ddv49m20, 5' ...   642   0.0    2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...   127   2e-98  23
(AU271948) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   127   4e-58  5
(AU271947) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   127   4e-58  5
(AU271949) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   127   4e-55  4
(BJ424226) Dictyostelium discoideum cDNA clone:ddv51e19, 5' ...    82   1e-49  6
(BJ426949) Dictyostelium discoideum cDNA clone:ddv60d22, 5' ...    82   3e-45  6
(BJ425998) Dictyostelium discoideum cDNA clone:ddv57c24, 5' ...    82   2e-40  6
(AU271950) Dictyostelium discoideum gamete cDNA clone:FC-IC0...    70   6e-33  5
(BJ342141) Dictyostelium discoideum cDNA clone:dda9m17, 3' e...   105   6e-18  1
(BJ425098) Dictyostelium discoideum cDNA clone:ddv54j18, 5' ...    62   3e-09  3
(BJ421896) Dictyostelium discoideum cDNA clone:ddv44n05, 5' ...    62   5e-08  2
(AY221643) Dictyostelium discoideum ComF (comF) gene, partia...    50   1e-05  3
(AE017308) Mycoplasma mobile 163K complete genome.                 38   0.013  19
(EI062546) hhc0004da12.b1 hhc Oryza granulata genomic clone ...    50   0.33   1
(DU931372) 353904 Tomato EcoRI BAC Library Solanum lycopersi...    40   0.69   2
(AZ176613) SP_0142_B1_D04_T7A Strongylocentrotus purpuratus,...    48   1.3    1
(EL433298) CHCS7625.b1_B12.ab1 CHC(LMS) Texas blueweed Helia...    48   1.3    1
(EL415238) CHCL3923.b1_E21.ab1 CHC(LMS) Texas blueweed Helia...    48   1.3    1
(EE623757) CHWS1768.b1_O10.ab1 CHW(LMS) silverleaf sunflower...    48   1.3    1
(BQ978906) QHI6J22.yg.ab1 QH_ABCDI sunflower RHA801 Helianth...    48   1.3    1
(GE510776) CCFT7682.g1_C01.ab1 CCF(STU) sunflower Helianthus...    48   1.3    1
(GE485983) CCFS2334.g1_K07.ab1 CCF(STU) sunflower Helianthus...    48   1.3    1
(U23477) Dictyostelium discoideum phosphatidylinositol-4,5-d...    42   1.4    3
(AB084781) Mycoplasma mobile genes for P123, Gli349, Gli521,...    36   2.1    7
(BX469927) Human DNA sequence *** SEQUENCING CANCELLED *** f...    32   2.5    2
(AC003992) Homo sapiens BAC clone CTA-250D13 from 7, complet...    32   2.6    2
(AC018978) Homo sapiens chromosome 10 clone RP11-396D16, com...    42   3.9    4
(EJ914308) 1093018552882 Global-Ocean-Sampling_GS-30-02-01-1...    36   4.3    2
(CT009553) M.truncatula DNA sequence from clone MTH2-115C19 ...    46   5.1    1
(AC157139) Bos taurus clone CH240-69L22, WORKING DRAFT SEQUE...    46   5.1    1
(AC129704) Rattus norvegicus clone CH230-9I1, *** SEQUENCING...    46   5.1    1
(AC207803) Zea mays chromosome unknown clone CH201-547D10; Z...    46   5.1    1
(ER596870) 1093016225691 Global-Ocean-Sampling_GS-36-01-01-2...    46   5.1    1
(DH077763) Oryzias latipes Fosmid clone:GOLWFno155_e08, forw...    46   5.1    1
(CZ800381) OC__Ba0171J19.r OC__Ba Oryza coarctata genomic cl...    46   5.1    1
(ES219482) MpGnorm_ag3_M09 Myzus persicae, tobacco lineage, ...    46   5.1    1
(DW012361) w16l1_M13F Myzus persicae, tobacco lineage, whole...    46   5.1    1
(AL844171) Zebrafish DNA sequence from clone DKEY-237G17.          38   6.7    5
(AE006326) Lactococcus lactis subsp. lactis IL1403 section 8...    36   6.9    3
(EJ901976) 1093018494279 Global-Ocean-Sampling_GS-30-02-01-1...    40   8.1    2
(EJ878276) 1093018381906 Global-Ocean-Sampling_GS-30-02-01-1...    36   8.9    2
(AL773582) Mouse DNA sequence from clone RP23-174J23 on chro...    34   9.2    2
(AC125195) Mus musculus BAC clone RP23-246M2 from 2, complet...    34   9.2    2
(EJ941200) 1093018866971 Global-Ocean-Sampling_GS-30-02-01-1...    36   9.2    2
(AC179477) Strongylocentrotus purpuratus clone R3-63M1, WORK...    32   9.3    2
(EK020223) 1092955271834 Global-Ocean-Sampling_GS-31-01-01-1...    36   9.5    2
(EJ957741) 1093018981890 Global-Ocean-Sampling_GS-30-02-01-1...    36   9.9    2

>(BJ366508) Dictyostelium discoideum cDNA clone:ddc39p06, 5' end,
            single read.
          Length = 616

 Score = 1221 bits (616), Expect = 0.0
 Identities = 616/616 (100%)
 Strand = Plus / Plus


Query: 907  ggtcaacaagttttaattacaactagtgtatatagagatgaatctgataaccaaaatgaa 966
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggtcaacaagttttaattacaactagtgtatatagagatgaatctgataaccaaaatgaa 60


Query: 967  gttatgacaattgcagctattcaaggtaaagttattcaatttaccaaaccacttagatat 1026
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gttatgacaattgcagctattcaaggtaaagttattcaatttaccaaaccacttagatat 120


Query: 1027 tatcattatggtggtcaagaatatcaagctgaagttgcattactttcaagaagaattgtt 1086
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tatcattatggtggtcaagaatatcaagctgaagttgcattactttcaagaagaattgtt 180


Query: 1087 tttagaggtgatggtaatggtcaggaacaaactgattctcaatcatttggtggtcatgta 1146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tttagaggtgatggtaatggtcaggaacaaactgattctcaatcatttggtggtcatgta 240


Query: 1147 ttagtaaatggtgaaggtcaattctctggtattcaattaattcgtatgggtcaaactaat 1206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ttagtaaatggtgaaggtcaattctctggtattcaattaattcgtatgggtcaaactaat 300


Query: 1207 ataaaagcaagatacccacttcactatcatttagcaggtacagttaaaaactcttatatc 1266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ataaaagcaagatacccacttcactatcatttagcaggtacagttaaaaactcttatatc 360


Query: 1267 tctgattgttcagtaactaatagttattatcgttgttatacaattcatggaacaaataat 1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  tctgattgttcagtaactaatagttattatcgttgttatacaattcatggaacaaataat 420


Query: 1327 gtcagtctagtccgtaatgttgcttttgatattcgtggtcattgttattatttagaagat 1386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  gtcagtctagtccgtaatgttgcttttgatattcgtggtcattgttattatttagaagat 480


Query: 1387 ggtgtttgaagttgataataacatttggttcaattttgcttcatatgtacatccaattgg 1446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ggtgtttgaagttgataataacatttggttcaattttgcttcatatgtacatccaattgg 540


Query: 1447 aaagccagctggtggtccaagtcaaactggtgaaattttccaacaatctgactcattaac 1506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  aaagccagctggtggtccaagtcaaactggtgaaattttccaacaatctgactcattaac 600


Query: 1507 ccaaccagctgattca 1522
            ||||||||||||||||
Sbjct: 601  ccaaccagctgattca 616

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,360,578,866
Number of extensions: 136926628
Number of successful extensions: 10711705
Number of sequences better than 10.0: 56
Length of query: 2015
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1991
Effective length of database: 96,409,374,237
Effective search space: 191951064105867
Effective search space used: 191951064105867
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
protein update 2009. 7.17
Homology vs Protein 
Query= Contig-U15573-1 (Contig-U15573-1Q) /CSM_Contig/Contig-U15573-1Q.Seq.d
         (2015 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116984_193(AC116984|pid:none) Dictyostelium discoideum chromos...   693   0.0
CP001576_63(CP001576|pid:none) Micromonas sp. RCC299 chromosome ...   177   4e-54
(Q80ZA4) RecName: Full=Fibrocystin-L; AltName: Full=Polycystic k...   135   5e-34
BX649562_2(BX649562|pid:none) Zebrafish DNA sequence from clone ...   137   3e-32
(Q86WI1) RecName: Full=Fibrocystin-L; AltName: Full=Polycystic k...   137   8e-32
CP000909_1416(CP000909|pid:none) Chloroflexus aurantiacus J-10-f...   137   1e-30
CP000804_2872(CP000804|pid:none) Roseiflexus castenholzii DSM 13...   127   2e-27
(Q5FWI3) RecName: Full=Transmembrane protein 2;  &BC089353_1(BC0...   108   1e-21
FN357448_23(FN357448|pid:none) Schistosoma mansoni genome sequen...   107   1e-21
EU643473_4(EU643473|pid:none) Adineta vaga clone Av240_A TPR rep...   107   1e-21
(Q9UHN6) RecName: Full=Transmembrane protein 2;  &AB384202_1(AB3...   101   1e-19
CP000155_3302(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    94   2e-17
AF480064_1(AF480064|pid:none) Homo sapiens polycystic kidney and...    89   5e-16
AY092083_1(AY092083|pid:none) Homo sapiens TIG multiple domains-...    89   5e-16
(Q8TCZ9) RecName: Full=Fibrocystin; AltName: Full=Polycystic kid...    89   5e-16
CP001280_1719(CP001280|pid:none) Methylocella silvestris BL2, co...    88   1e-15
AB033025_1(AB033025|pid:none) Homo sapiens mRNA for KIAA1199 pro...    87   2e-15
BC020256_1(BC020256|pid:none) Homo sapiens KIAA1199, mRNA (cDNA ...    87   2e-15
BC140773_1(BC140773|pid:none) Homo sapiens transmembrane protein...    86   5e-15
AB103331_1(AB103331|pid:none) Mus musculus mRNA for KIAA1199 pro...    86   5e-15
(Q8BI06) RecName: Full=Protein KIAA1199 homolog; AltName: Full=P...    86   5e-15
AY438374_1(AY438374|pid:none) Mus musculus PKHD1 (Pkhd1) mRNA, c...    84   1e-14
AY130764_1(AY130764|pid:none) Mus musculus polyductin (Pkhd1) mR...    84   2e-14
CP000594_150(CP000594|pid:none) Ostreococcus lucimarinus CCE9901...    81   2e-13
AY449458_4(AY449458|pid:none) Oikopleura dioica clone BACOIKO002...    64   2e-08
CP000828_4326(CP000828|pid:none) Acaryochloris marina MBIC11017,...    55   7e-06
AL359061_1(AL359061|pid:none) Homo sapiens mRNA full length inse...    47   0.003
AY268963_1(AY268963|pid:none) Gorilla gorilla Q9ULM1 gene, exon ...    41   0.19
AY268966_1(AY268966|pid:none) Macaca mulatta Q9ULM1 gene, exon 5...    41   0.19
AY268967_1(AY268967|pid:none) Mandrillus sphinx Q9ULM1 gene, exo...    40   0.25
AY268968_1(AY268968|pid:none) Saguinus oedipus Q9ULM1 gene, exon...    40   0.25
AL356324_10(AL356324|pid:none) Neurospora crassa DNA linkage gro...    39   0.55
CP000771_635(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1...    38   1.2
AF290208_2(AF290208|pid:none) Mus musculus podocalyxin (Podxl) g...    37   2.1
(Q9R0M4) RecName: Full=Podocalyxin-like protein 1; Flags: Precur...    37   2.1
CR382129_144(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    37   3.6
CP000679_2544(CP000679|pid:none) Caldicellulosiruptor saccharoly...    36   6.1
CT030003_14(CT030003|pid:none) Integrative Conjugative Element M...    35   7.9
FJ444852_1(FJ444852|pid:none) Olive latent virus 3 isolate CN1/1...    35   7.9

>AC116984_193(AC116984|pid:none) Dictyostelium discoideum chromosome 2
            map 2567470-3108875 strain AX4, complete sequence.
          Length = 1096

 Score =  693 bits (1789), Expect = 0.0
 Identities = 364/635 (57%), Positives = 451/635 (71%), Gaps = 11/635 (1%)
 Frame = +1

Query: 1    SLELLLGQPLGEYTSISNVSIYFFNPKDITNPNGNSRYFQYSNKPPLYMKTFSGANFISN 180
            S +  LG+ LGEY +  ++ + F+ P+DI        YF +  + PLY       NF S
Sbjct: 95   SFDFKLGKALGEYNNYQSMVLSFYIPEDIA-------YFPWEIRTPLYTTNEFSGNFAST 147

Query: 181  SNFIKTSITFSPTKDIGSAVFALQINRTAALTGPSEISISIKDMKFTILPKTITQPT-LL 357
            S   K  +TF  T DIG+++  L+INR A  TGP+  S+  ++MK TI  K IT PT LL
Sbjct: 148  SYQSKI-LTFRSTVDIGNSIMVLRINR-ATETGPTASSVYFRNMKITIPSKPITTPTDLL 205

Query: 358  IKDSELVNLPKPSTSFDPQDSSTCPYL-ANDLVHWHNPSTWPNGIIPSPSSNITLPEGKK 534
             KDSEL+ +PKP  S D QD + CPYL A+DL +WH+P+ WPNG++PSP+ NIT+P GK+
Sbjct: 206  TKDSELIVIPKPPISLDLQDLTKCPYLTASDLYNWHDPTIWPNGVVPSPNQNITIPAGKR 265

Query: 535  VLISPCSISQTQVYKWIKVSSTSELIFADSPMDFHVKDIYVEGKFIMGTTKCRYNSKINI 714
            VLIS  SISQTQ+Y  I V   SELIF D     +++DIYV+GKFIMGT+ CRYNS INI
Sbjct: 266  VLISASSISQTQIYSRIVVPVNSELIFNDQNFTMNIRDIYVQGKFIMGTSLCRYNSFINI 325

Query: 715  IFHGEKTLSDTISQYYGSKGIAVASGGFISVQGKQYHNTWSKLSASAWSGDYVIYVQDSI 894
            IFHGEKTL DTI+Q+YGSKGIAVASGGFISVQGKQYHNTWSKL+++ WSGD VI++QD++
Sbjct: 326  IFHGEKTLQDTIAQFYGSKGIAVASGGFISVQGKQYHNTWSKLASNVWSGDRVIWIQDNV 385

Query: 895  NWEVGQQVLITTSVYRDESDNQNEVMTIAAIQGKVIQFTKPLRYYHYGGQEYQAEVALLS 1074
            NWEVGQQVLITTSVY+DE DNQNE++TI AI+GK I+FT+P++++ YG QEYQ+EVALLS
Sbjct: 386  NWEVGQQVLITTSVYKDELDNQNEILTIKAIEGKKIEFTEPIKWFKYGSQEYQSEVALLS 445

Query: 1075 RRIVFRGDGNGQEQTDSQSFGGHVLVNGEGQFSGIQLIRMGQTNIKARYPLHYHLAGTVK 1254
            RRIVF  D   +  + S SFGGH+L +GE QF+G+QL RMGQ N+KARYPLHYHL GT+
Sbjct: 446  RRIVFSSD---ESSSVSTSFGGHILSSGEMQFAGVQLKRMGQKNVKARYPLHYHLGGTLN 502

Query: 1255 NSYISDCSVTNSYYRCYTIHGTNNVSLVRNVAFDIRGHCYYLEDGV*S***HLVQF---C 1425
            NS+ISDCSVTNSYYRCYTIHGTNNV+L RNVA+D  GHCYYLEDGV     + + F
Sbjct: 503  NSFISDCSVTNSYYRCYTIHGTNNVTLTRNVAYDAFGHCYYLEDGVEV--DNRISFNLGA 560

Query: 1426 FICTXXXXXXXXXXXXXXXFPTI*LINPT-S*FSCWVLL--YNKCI---*LFGW*CCKWR 1587
            ++ T               + +  L  P  S  SC+ +   +N  I      GW
Sbjct: 561  YVHTIGKPAAGASQIGETFYQSSELTQPADSAASCFYITNSWNSFIGNAASGGW------ 614

Query: 1588 LEWFCFPNLDKPIGNHRTISIIPSQFPLKEFTGNTAHSSGYYFEEGGSIYVGGNLTFNEA 1767
               F FPNL KPIGNHRT++IIP Q+P+KE+ GNTAHSSGYYFE+G SIYVGGNLTFNEA
Sbjct: 615  -AGFAFPNLPKPIGNHRTLNIIPMQYPIKEWQGNTAHSSGYYFEDGASIYVGGNLTFNEA 673

Query: 1768 TQLLTYNSGRFSRSTYYNGTKKDGNERWMRFNNTK 1872
              +L YNSGR  R+TY NG K + N  + R NNTK
Sbjct: 674  NGMLIYNSGRLGRTTYVNGVKNENNVVFDRLNNTK 708

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,058,878,710
Number of extensions: 63983372
Number of successful extensions: 169784
Number of sequences better than 10.0: 39
Number of HSP's gapped: 169626
Number of HSP's successfully gapped: 66
Length of query: 671
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 536
Effective length of database: 614,245,399
Effective search space: 329235533864
Effective search space used: 329235533864
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.75  gvh: 0.26  alm: 0.54  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 28.0 %: cytoplasmic
	 24.0 %: cytoskeletal
	  4.0 %: mitochondrial

>> prediction for Contig-U15573-1 is nuc
VS (DIR, S) 0
VH (FL, L) 5
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 2
FC-IC (SUB) 2