| Contig-U15572-1 |
| Contig ID |
Contig-U15572-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
2155 |
| Chromosome number (1..6, M) |
- |
| Chromosome length |
- |
| Start point |
- |
| End point |
- |
| Strand (PLUS/MINUS) |
- |
| Number of clones |
16 |
| Number of EST |
20 |
| Link to clone list |
U15572 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 2. 1 |
| Homology vs DNA |
Query= Contig-U15572-1 (Contig-U15572-1Q) /CSM_Contig/Contig-U15572-1Q.Seq.d
(2165 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ401782) Dictyostelium discoideum cDNA clone:dds19k07, 3' ... 420 0.0 5
(AU034856) Dictyostelium discoideum slug cDNA, clone SLE595. 789 0.0 1
(AU061542) Dictyostelium discoideum slug cDNA, clone SLE595. 303 0.0 5
(BJ429194) Dictyostelium discoideum cDNA clone:ddv2m15, 3' e... 303 0.0 8
(BJ389605) Dictyostelium discoideum cDNA clone:dds19k07, 5' ... 256 e-150 4
(BJ411008) Dictyostelium discoideum cDNA clone:ddv2m15, 5' e... 256 e-121 5
(BJ436808) Dictyostelium discoideum cDNA clone:ddv32e10, 3' ... 202 3e-86 2
(AF045453) Dictyostelium discoideum protein kinase YakA (yak... 202 3e-69 3
(BJ341936) Dictyostelium discoideum cDNA clone:dda8f21, 3' e... 202 2e-68 2
(BJ341864) Dictyostelium discoideum cDNA clone:dda8b13, 3' e... 202 9e-63 4
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 172 4e-38 1
(AU060272) Dictyostelium discoideum slug cDNA, clone SLA811. 172 4e-38 1
(BJ388863) Dictyostelium discoideum cDNA clone:dds16f16, 5' ... 172 4e-38 1
(BJ369762) Dictyostelium discoideum cDNA clone:ddc51m15, 5' ... 172 4e-38 1
(BJ332671) Dictyostelium discoideum cDNA clone:dda39m23, 5' ... 172 4e-38 1
(BJ330632) Dictyostelium discoideum cDNA clone:dda32p04, 5' ... 172 4e-38 1
(DY890439) CeleSEQ9444 Cunninghamella elegans pBluescript (E... 36 0.003 4
(DY890448) CeleSEQ9456 Cunninghamella elegans pBluescript (E... 36 0.003 4
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 0.006 12
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 46 0.031 10
(AM053804) Eudiplodinium maggii EST, clone Em07_D03. 48 0.036 2
(BJ433805) Dictyostelium discoideum cDNA clone:ddv23a06, 3' ... 40 0.043 2
(BJ430741) Dictyostelium discoideum cDNA clone:ddv8e15, 3' e... 40 0.045 2
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 44 0.046 7
(CS468878) Sequence 69 from Patent EP1748080. 40 0.060 12
(CS419355) Sequence 69 from Patent WO2006094836. 40 0.060 12
(CU928228) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.090 1
(ET790777) CHO_OF646xc23r1.ab1 CHO_OF Nicotiana tabacum geno... 52 0.090 1
(AM633769) Entamoeba dispar GSS, clone dispar108d06.p1k. 52 0.090 1
(CS468877) Sequence 68 from Patent EP1748080. 40 0.11 11
(CS419354) Sequence 68 from Patent WO2006094836. 40 0.11 11
(AU039025) Dictyostelium discoideum slug cDNA, clone SSM289. 40 0.12 3
(AC116987) Dictyostelium discoideum chromosome 2 map 3527441... 36 0.14 6
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 42 0.15 17
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.21 10
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 40 0.22 14
(AC184318) Strongylocentrotus purpuratus clone R3-4005F4, WO... 50 0.35 1
(AC181341) Strongylocentrotus purpuratus clone R3-40C5, WORK... 50 0.35 1
(AC181299) Strongylocentrotus purpuratus clone R3-115H9, WOR... 50 0.35 1
(AC180391) Strongylocentrotus purpuratus clone R3-3106C19, W... 50 0.35 1
(AC179044) Strongylocentrotus purpuratus clone R3-4005D21, W... 50 0.35 1
(AC176043) Strongylocentrotus purpuratus clone R3-18J7, WORK... 50 0.35 1
(EK088799) 1092961188234 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.35 1
(DY830145) CTOY5742.b1_L20.ab1 CTO(XYZ) dandelion Taraxacum ... 50 0.35 1
(DY825525) CTOY17073.b1_B21.ab1 CTO(XYZ) dandelion Taraxacum... 50 0.35 1
(DY823561) CTOY1526.b1_L22.ab1 CTO(XYZ) dandelion Taraxacum ... 50 0.35 1
(DY820715) CTOY12623.b1_N12.ab1 CTO(XYZ) dandelion Taraxacum... 50 0.35 1
(DY819706) CTOY11699.b1_F21.ab1 CTO(XYZ) dandelion Taraxacum... 50 0.35 1
(DY814926) CTOX3367.b1_N02.ab1 CTO(XYZ) dandelion Taraxacum ... 50 0.35 1
(DY805844) CTOX14001.b1_B21.ab1 CTO(XYZ) dandelion Taraxacum... 50 0.35 1
(DY804358) CTOX12494.b1_K04.ab1 CTO(XYZ) dandelion Taraxacum... 50 0.35 1
(BM165609) EST568132 PyBS Plasmodium yoelii yoelii cDNA clon... 48 0.44 2
(BB981526) Plasmodium berghei str. ANKA cDNA clone: OK011801... 48 0.56 2
(BM162962) EST565485 PyBS Plasmodium yoelii yoelii cDNA clon... 48 0.63 2
(DC219906) Plasmodium berghei strain ANKA cDNA clone:MZ00177... 48 0.72 2
(AC161117) Mus musculus BAC clone RP24-146I24 from chromosom... 38 0.75 2
(AC139242) Mus musculus BAC clone RP23-435I6 from chromosome... 38 0.75 2
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 38 0.75 13
(AF051898) Dictyostelium discoideum coronin binding protein ... 32 0.78 4
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.82 19
(DK294998) Drosophila auraria mRNA, adult full-length cDNA c... 38 1.0 2
(DK299473) Drosophila auraria mRNA, adult full-length cDNA c... 38 1.1 2
(AL035476) Plasmodium falciparum MAL4P3. 36 1.4 18
(DL235836) NOVEL COMPOSITIONS AND METHODS FOR CANCER. 48 1.4 1
(DD164535) NOVEL COMPOSITIONS AND METHODS FOR CANCER. 48 1.4 1
(CS741949) Sequence 9945 from Patent WO2005083127. 48 1.4 1
(AX695755) Sequence 1382 from Patent WO03008583. 48 1.4 1
(AB030033) Dictyostelium discoideum gene for AmiB, complete ... 48 1.4 1
(U88725) Human type 1 inositol 1,4,5-trisphosphate receptor ... 48 1.4 1
(AL031075) Human DNA sequence from clone RP4-789O11 on chrom... 48 1.4 1
(AC097103) Homo sapiens 3 BAC RP11-319G6 (Roswell Park Cance... 48 1.4 1
(AC090944) Homo sapiens chromosome 3 clone RP11-238A9 map 3p... 48 1.4 1
(AC024168) Homo sapiens chromosome 3 clone RP11-622P3 map 3p... 48 1.4 1
(AC131485) Lytechinus variegatus clone Lv183H12, *** SEQUENC... 48 1.4 1
(AC105000) Homo sapiens chromosome 8 clone CTD-2054D22 map 8... 48 1.4 1
(AC013379) Homo sapiens chromosome 2 clone RP11-349D24 map 2... 48 1.4 1
(AL832729) Homo sapiens mRNA; cDNA DKFZp686D1113 (from clone... 48 1.4 1
(AZ541993) ENTEA86TF Entamoeba histolytica Sheared DNA Entam... 48 1.4 1
(AZ530831) ENTBO66TR Entamoeba histolytica Sheared DNA Entam... 48 1.4 1
(FH293781) CHO_OF4219xm02r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 1.4 1
(FH293713) CHO_OF4219xm02f1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 1.4 1
(EK304071) 1095462374705 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK061425) 1092960085561 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(AM629002) Entamoeba dispar GSS, clone dispar31f09.p1k. 48 1.4 1
(BM163768) EST566291 PyBS Plasmodium yoelii yoelii cDNA clon... 48 1.4 1
(BM163581) EST566104 PyBS Plasmodium yoelii yoelii cDNA clon... 48 1.4 1
(BM160925) EST563448 PyBS Plasmodium yoelii yoelii cDNA clon... 48 1.4 1
(BJ388687) Dictyostelium discoideum cDNA clone:dds6b21, 5' e... 48 1.4 1
(BB975879) Plasmodium berghei str. ANKA cDNA clone: OK005727... 48 1.4 1
(FL591941) LE_MX0_70E08_SP6 Skate Multiple Tissues, Normaliz... 48 1.4 1
(FK917086) EST_lsal_evj_952179 lsalevj mixed_tissue_mixed_st... 48 1.4 1
(FF601923) Le_emcl1_13G08_M13Reverse Little Skate (Leucoraja... 48 1.4 1
(FF601689) Le_emcl1_11G08_M13Reverse Little Skate (Leucoraja... 48 1.4 1
(C22962) Dictyostelium discoideum gamete cDNA, clone FC-AL02. 40 1.7 2
(AC113969) Mus musculus chromosome 8, clone RP23-122L19, com... 40 1.8 7
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 34 1.8 11
(EH014694) USDA-FP_187369 Lysiphlebus testaceipes adult whol... 38 1.9 3
(FF309353) 279375422 Pea aphid whole body normalized full le... 36 2.0 3
(EX611392) 255375418 Pea aphid whole body normalized full le... 36 2.2 3
(EL965424) CF_WO0_45h07_SP6 Copepod Whole Organism, Normaliz... 42 2.2 2
(EC824464) SME00009792 esmbsro2 Sawyeria marylandensis cDNA,... 46 2.3 2
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 2.3 14
(EX617238) 255398682 Pea aphid whole body normalized full le... 36 2.3 3
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 46 2.4 18
(AZ673392) ENTMT76TF Entamoeba histolytica Sheared DNA Entam... 36 2.7 2
(AC026760) Mus musculus strain C57BL6/J clone RP23-80P11, WO... 32 2.7 2
(AC130099) Rattus norvegicus clone CH230-167L6, *** SEQUENCI... 36 2.7 2
(AC154872) Mus musculus chromosome 1, clone RP23-393C3, comp... 32 2.7 2
(AC131998) Mus musculus chromosome 1, clone RP24-164G9, comp... 32 2.8 2
(AF079445) Dictyostelium discoideum TipC (tipC) gene, comple... 40 2.9 4
(BH131371) ENTON33TR Entamoeba histolytica Sheared DNA Entam... 36 3.1 3
(EJ620529) 1092963056078 Global-Ocean-Sampling_GS-29-01-01-1... 42 3.1 2
(AU074870) Dictyostelium discoideum slug cDNA, clone SSM289. 32 3.2 3
(EJ633712) 1092970301477 Global-Ocean-Sampling_GS-29-01-01-1... 42 3.3 2
(BH045779) RPCI-24-318J11.TV RPCI-24 Mus musculus genomic cl... 32 3.6 2
(DH491456) Monosiga ovata DNA, fosmid clone: MOF-052D13, gen... 32 3.7 2
(AL844509) Plasmodium falciparum chromosome 13. 46 3.7 15
(AZ689528) ENTHR28TR Entamoeba histolytica Sheared DNA Entam... 36 3.9 3
(BJ340314) Dictyostelium discoideum cDNA clone:dda12f16, 3' ... 42 4.2 2
(AC161594) Mus musculus BAC clone RP24-153G11 from chromosom... 44 4.2 10
(AC175942) Strongylocentrotus purpuratus clone R3-17B22, WOR... 44 4.3 5
(DW405085) ES-N-S02-0203-W Penaeus monodon Eyestalk cDNA lib... 40 4.9 3
(AU039211) Dictyostelium discoideum slug cDNA, clone SLH156. 42 5.1 2
(AC145156) Medicago truncatula clone mth2-7h6, complete sequ... 40 5.2 2
(CR759811) Zebrafish DNA sequence from clone CH211-190M18 in... 46 5.5 1
(BX629343) Zebrafish DNA sequence from clone DKEY-66M17 in l... 46 5.5 1
(BV612834) S217P60505FA10.T0 Noemie Pan troglodytes troglody... 46 5.5 1
(AC186877) Pan troglodytes BAC clone CH251-642J15 from chrom... 46 5.5 1
(AC210485) Oryza glaberrima clone OG_BBa0077G11, complete se... 46 5.5 1
(AC210447) Oryza glaberrima clone OG_BBa0010M11, complete se... 46 5.5 1
(AC149367) Phakopsora pachyrhizi clone JGIAFNA-53G15, comple... 46 5.5 1
(AF077591) Penaeus monodon clone TUZX4-6:74 microsatellite s... 46 5.5 1
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 46 5.5 1
(AC097521) Homo sapiens BAC clone RP11-565A3 from 4, complet... 46 5.5 1
(AC007103) Homo sapiens chromosome 4 clone C0190D22 map 4p16... 46 5.5 1
(AC151222) Bos taurus clone CH240-62O11, WORKING DRAFT SEQUE... 46 5.5 1
(AC129653) Rattus norvegicus clone CH230-9B15, *** SEQUENCIN... 46 5.5 1
(AC125938) Rattus norvegicus clone CH230-11B3, *** SEQUENCIN... 46 5.5 1
(AC120637) Rattus norvegicus clone CH230-139A3, *** SEQUENCI... 46 5.5 1
(AC105587) Rattus norvegicus clone CH230-239H2, *** SEQUENCI... 46 5.5 1
(AC096900) Rattus norvegicus clone CH230-4K17, *** SEQUENCIN... 46 5.5 1
(AC095737) Rattus norvegicus clone CH230-9B2, *** SEQUENCING... 46 5.5 1
(AC094809) Rattus norvegicus clone CH230-4C12, *** SEQUENCIN... 46 5.5 1
(FP015785) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 5.5 1
(CU929472) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.5 1
(CU499351) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 5.5 1
(CT025921) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 5.5 1
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 46 5.5 1
(AL844507) Plasmodium falciparum chromosome 8. 46 5.5 1
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 46 5.5 1
(AC215504) Zea mays chromosome 3 clone CH201-290K16; ZMMBBc0... 46 5.5 1
(AC208198) Zea mays chromosome 3 clone CH201-130H10; ZMMBBc0... 46 5.5 1
(AC181909) Strongylocentrotus purpuratus clone R3-1012H12, W... 46 5.5 1
(AC181365) Strongylocentrotus purpuratus clone R3-3040O01, W... 46 5.5 1
(AC180796) Strongylocentrotus purpuratus clone R3-3073K14, W... 46 5.5 1
(AC180577) Strongylocentrotus purpuratus clone R3-3092O15, W... 46 5.5 1
(AC179054) Strongylocentrotus purpuratus clone R3-4005I14, W... 46 5.5 1
(AC178296) Strongylocentrotus purpuratus clone R3-3096I4, WO... 46 5.5 1
(AC177055) Strongylocentrotus purpuratus clone R3-4004C20, W... 46 5.5 1
(AC176793) Strongylocentrotus purpuratus clone R3-3106M5, WO... 46 5.5 1
(AC175950) Strongylocentrotus purpuratus clone R3-17D16, WOR... 46 5.5 1
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 46 5.5 1
(FH905333) CHO_ONF031xm10f1.ab1 CHO_ONF Nicotiana tabacum ge... 46 5.5 1
(FH104517) CHO_OF3118xh10r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 5.5 1
(ER455701) 1092963867982 Global-Ocean-Sampling_GS-35-01-01-1... 46 5.5 1
(EK091505) 1092962003621 Global-Ocean-Sampling_GS-31-01-01-1... 46 5.5 1
(EJ721867) 1092959456724 Global-Ocean-Sampling_GS-30-02-01-1... 46 5.5 1
(EJ681548) 1092955133629 Global-Ocean-Sampling_GS-30-02-01-1... 46 5.5 1
(DX832269) ZMMBLb0013B08.f ZMMBLb Zea mays genomic clone ZMM... 46 5.5 1
(DX827247) ZMMBLb0005M06.f ZMMBLb Zea mays genomic clone ZMM... 46 5.5 1
(DX827185) ZMMBLb0005K19.f ZMMBLb Zea mays genomic clone ZMM... 46 5.5 1
(DX826948) ZMMBLb0005F08.f ZMMBLb Zea mays genomic clone ZMM... 46 5.5 1
(DE970449) Macropus eugenii DNA, BAC clone: MEB1-175E17_F, 5... 46 5.5 1
(DE234294) Trifolium pratense DNA, clone:RCG28678. 46 5.5 1
(CW027276) 104_253_10498422_114_30533 Sorghum methylation fi... 46 5.5 1
(CC083459) CSU-K33r.6C18.T7 CSU-K33r Aedes aegypti genomic c... 46 5.5 1
(EC821684) SME00004139 esmbsro2 Sawyeria marylandensis cDNA,... 46 5.5 1
(CU880286) Podospora anserina mRNA 5-prime sequence from clo... 46 5.5 1
(CO796641) AGENCOURT_30343336 NIH_ZGC_14 Danio rerio cDNA cl... 46 5.5 1
(BU495988) PfESToab80d03.y1 Plasmodium falciparum 3D7 asexua... 46 5.5 1
(FE176974) LV_NC_RA15D10f Litopenaeus vannamei nerve cord cD... 46 5.5 1
(FD404856) 1106514447306 Cryptosporidium muris (strain RN66)... 46 5.5 1
(FD400765) 1106514329790 Cryptosporidium muris (strain RN66)... 46 5.5 1
(EY818282) PT11-C1-900-095-E06-CT.F Poncirus trifoliata leaf... 46 5.5 1
(EY765919) CR05-C1-100-092-G08-CT.F Mandarin leaf, greenhous... 46 5.5 1
(EY376936) CAXA16446.fwd CAXA Helobdella robusta Subtracted ... 46 5.5 1
(EY259865) BF01002X1A08.f1 Normalized subtracted keck librar... 46 5.5 1
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 5.6 14
(BG736709) rk61c05.y1 Meloidogyne javanica egg pAMP1 v6 Chia... 36 6.1 2
(AQ407807) HS_5057_A1_A11_T7 RPCI-11 Human Male BAC Library ... 38 6.3 2
(AU039462) Dictyostelium discoideum slug cDNA, clone SLH830. 42 6.4 2
(AM742429) Cucumis melo subsp. melo EST, clone 46d_39-D02-M13R. 36 6.4 2
(BJ375591) Dictyostelium discoideum cDNA clone:ddc19b11, 3' ... 42 7.1 2
(BJ372415) Dictyostelium discoideum cDNA clone:ddc12e13, 3' ... 42 7.3 2
(BJ371841) Dictyostelium discoideum cDNA clone:ddc1o18, 3' e... 42 7.4 2
(AJ733005) Gallus gallus EST, clone 5l17s2. 40 7.8 2
(BJ399055) Dictyostelium discoideum cDNA clone:dds3i24, 3' e... 42 7.8 2
(BJ374252) Dictyostelium discoideum cDNA clone:ddc6l06, 3' e... 42 8.1 2
(AJ733002) Gallus gallus EST, clone 5l17r3. 40 8.1 2
(BJ374999) Dictyostelium discoideum cDNA clone:ddc17f04, 3' ... 42 8.2 2
(EK247649) 1095460264816 Global-Ocean-Sampling_GS-31-01-01-1... 36 8.3 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 40 8.4 11
(AC208572) Zea mays chromosome 2 clone ZMMBBb-396M22; ZMMBBb... 44 8.5 3
(AC174882) Strongylocentrotus purpuratus clone R3-1113G17, W... 44 8.6 5
(FH377673) CHO_OF4612xc17f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.8 2
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 34 8.8 8
(BJ346363) Dictyostelium discoideum cDNA clone:dda30n13, 3' ... 42 8.8 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 9.4 2
(AM723371) Cucumis melo subsp. melo EST, clone PSI_04-D09-M13R. 36 9.5 2
(FE121128) LV_HC_RA073H15r Litopenaeus vannamei hemocyte cDN... 38 9.6 2
(BX139987) Danio rerio genomic clone DKEY-99E7, genomic surv... 38 9.9 2
(FI064192) CHO_OF7247xi20r1.ab1 CHO_OF7 Nicotiana tabacum ge... 44 9.9 2
(AC153887) Mus musculus 10 BAC RP23-473N3 (Roswell Park Canc... 36 9.9 7
>(BJ401782) Dictyostelium discoideum cDNA clone:dds19k07, 3' end,
single read.
Length = 647
Score = 420 bits (212), Expect(5) = 0.0
Identities = 212/212 (100%)
Strand = Plus / Minus
Query: 1035 ggtacaccacctgcatctaaagaagaaattgaaaaattaaaaagagatagagttgatcaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ggtacaccacctgcatctaaagaagaaattgaaaaattaaaaagagatagagttgatcaa 167
Query: 1095 acaatcgttgatcaaaaagttgattgtgcagtctgtaaagatgaattcaaatggggtgat 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 acaatcgttgatcaaaaagttgattgtgcagtctgtaaagatgaattcaaatggggtgat 107
Query: 1155 gattatatagaactaccatgtcaacatttatatcatcctgagtgtatattaccttggtta 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gattatatagaactaccatgtcaacatttatatcatcctgagtgtatattaccttggtta 47
Query: 1215 gaacaacataatagttgtccagtttgtagatt 1246
||||||||||||||||||||||||||||||||
Sbjct: 46 gaacaacataatagttgtccagtttgtagatt 15
Score = 303 bits (153), Expect(5) = 0.0
Identities = 153/153 (100%)
Strand = Plus / Minus
Query: 748 gacaaagaaccagaagtagtagtaccagtagtgatgttgaaaataatgatagtagtgagg 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gacaaagaaccagaagtagtagtaccagtagtgatgttgaaaataatgatagtagtgagg 454
Query: 808 atgattttgattttggtttacaaatgccacaagcagtagaaattgatcaagttttattta 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atgattttgattttggtttacaaatgccacaagcagtagaaattgatcaagttttattta 394
Query: 868 atatatcacaattattaggtggagtaccctcaa 900
|||||||||||||||||||||||||||||||||
Sbjct: 393 atatatcacaattattaggtggagtaccctcaa 361
Score = 168 bits (85), Expect(5) = 0.0
Identities = 85/85 (100%)
Strand = Plus / Minus
Query: 941 cgccagaggttatgtcggtaacccaaatgattattttcaagggggtgactggcaaggttt 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cgccagaggttatgtcggtaacccaaatgattattttcaagggggtgactggcaaggttt 261
Query: 1001 tttaaatagaatgtttcaagcaagc 1025
|||||||||||||||||||||||||
Sbjct: 260 tttaaatagaatgtttcaagcaagc 236
Score = 83.8 bits (42), Expect(5) = 0.0
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 614 caccagtggtgctagaacaaatgtttttggtgctccaagacaacgtag 661
||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 647 caccagtggtgntagaacaaatgtttttggtgctncaagacaacgtag 600
Score = 26.3 bits (13), Expect(5) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 1249 aattaaaaaccga 1261
|||||||||||||
Sbjct: 13 aattaaaaaccga 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,776,351,964
Number of extensions: 113322737
Number of successful extensions: 10056770
Number of sequences better than 10.0: 216
Length of query: 2165
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 2141
Effective length of database: 96,409,374,237
Effective search space: 206412470241417
Effective search space used: 206412470241417
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 7.17 |
| Homology vs Protein |
Query= Contig-U15572-1 (Contig-U15572-1Q) /CSM_Contig/Contig-U15572-1Q.Seq.d
(2165 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC151824_8(AC151824|pid:none) Medicago truncatula clone mth2-45n... 112 7e-23
EF148380_1(EF148380|pid:none) Populus trichocarpa x Populus delt... 110 3e-22
AB025631_20(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 109 5e-22
AY095995_1(AY095995|pid:none) Arabidopsis thaliana AT3g19950/MPN... 109 5e-22
AM479559_1(AM479559|pid:none) Vitis vinifera contig VV78X210188.... 107 2e-21
EU960987_1(EU960987|pid:none) Zea mays clone 230224 RHC1A mRNA, ... 102 6e-20
BT034350_1(BT034350|pid:none) Zea mays full-length cDNA clone ZM... 102 7e-20
AC087182_2(AC087182|pid:none) Oryza sativa chromosome 10 BAC OSJ... 101 1e-19
AP008216_900(AP008216|pid:none) Oryza sativa (japonica cultivar-... 101 1e-19
EU953261_1(EU953261|pid:none) Zea mays clone 1394374 RING finger... 100 2e-19
AK070491_1(AK070491|pid:none) Oryza sativa Japonica Group cDNA c... 100 3e-19
BT010726_1(BT010726|pid:none) Arabidopsis thaliana At3g13430 mRN... 100 4e-19
AM473803_1(AM473803|pid:none) Vitis vinifera contig VV78X263527.... 98 1e-18
AY081329_1(AY081329|pid:none) Arabidopsis thaliana ABI3-interact... 98 1e-18
FJ640556_1(FJ640556|pid:none) Triticum aestivum cultivar Zhongyo... 97 2e-18
AK062015_1(AK062015|pid:none) Oryza sativa Japonica Group cDNA c... 97 3e-18
AM474392_1(AM474392|pid:none) Vitis vinifera contig VV78X162630.... 96 4e-18
EU954580_1(EU954580|pid:none) Zea mays clone 1471379 protein bin... 96 7e-18
BT069968_1(BT069968|pid:none) Zea mays full-length cDNA clone ZM... 96 7e-18
BT068134_1(BT068134|pid:none) Zea mays full-length cDNA clone ZM... 95 1e-17
AL162508_3(AL162508|pid:none) Arabidopsis thaliana DNA chromosom... 94 2e-17
AK176418_1(AK176418|pid:none) Arabidopsis thaliana mRNA, partial... 94 2e-17
AC002409_3(AC002409|pid:none) Arabidopsis thaliana chromosome 2 ... 94 2e-17
AC135594_35(AC135594|pid:none) Oryza sativa chromosome 3 BAC OSJ... 94 2e-17
(Q9CY62) RecName: Full=RING finger protein 181; &AK010854_1(AK0... 94 2e-17
AK018849_1(AK018849|pid:none) Mus musculus adult male testis cDN... 94 2e-17
AY045983_1(AY045983|pid:none) Arabidopsis thaliana unknown prote... 93 3e-17
BT037305_1(BT037305|pid:none) Zea mays full-length cDNA clone ZM... 93 5e-17
AC079022_20(AC079022|pid:none) Oryza sativa chromosome 5 clone P... 93 5e-17
AP008211_65(AP008211|pid:none) Oryza sativa (japonica cultivar-g... 93 5e-17
AC079356_2(AC079356|pid:none) Oryza sativa (japonica cultivar-gr... 93 5e-17
BT066034_1(BT066034|pid:none) Zea mays full-length cDNA clone ZM... 93 5e-17
EU824051_1(EU824051|pid:none) Populus tremula isolate swl312-64E... 93 5e-17
AB026262_1(AB026262|pid:none) Cicer arietinum mRNA for ring fing... 93 5e-17
EU960124_1(EU960124|pid:none) Zea mays clone 222001 RING finger ... 93 5e-17
AM462015_2(AM462015|pid:none) Vitis vinifera contig VV78X029871.... 92 6e-17
EU824031_1(EU824031|pid:none) Populus tremula isolate swl312-75 ... 92 6e-17
EU824016_1(EU824016|pid:none) Populus tremula isolate swl312-14 ... 92 6e-17
AK000559_1(AK000559|pid:none) Homo sapiens cDNA FLJ20552 fis, cl... 92 6e-17
EU824036_1(EU824036|pid:none) Populus tremula isolate swl312-85 ... 92 6e-17
BC133164_1(BC133164|pid:none) Danio rerio cDNA clone MGC:158807 ... 92 6e-17
AB009049_7(AB009049|pid:none) Arabidopsis thaliana genomic DNA, ... 92 6e-17
(Q9BV68) RecName: Full=RING finger protein 126; &BC001442_1(BC0... 92 6e-17
EU824014_1(EU824014|pid:none) Populus tremula isolate swl312-3 t... 92 6e-17
(Q6AXU4) RecName: Full=RING finger protein 181; &BC079313_1(BC0... 92 8e-17
AK341832_1(AK341832|pid:none) Acyrthosiphon pisum ACYPI000911 mR... 92 1e-16
(Q91YL2) RecName: Full=RING finger protein 126; &AK154781_1(AK1... 92 1e-16
AP004687_9(AP004687|pid:none) Oryza sativa Japonica Group genomi... 92 1e-16
BC099810_1(BC099810|pid:none) Rattus norvegicus ring finger prot... 92 1e-16
EU824032_1(EU824032|pid:none) Populus tremula isolate swl312-76 ... 92 1e-16
AC011708_11(AC011708|pid:none) Arabidopsis thaliana chromosome I... 91 1e-16
AK118283_1(AK118283|pid:none) Arabidopsis thaliana At3g19950 mRN... 91 2e-16
AM453212_1(AM453212|pid:none) Vitis vinifera contig VV78X031497.... 91 2e-16
BT074946_1(BT074946|pid:none) Osmerus mordax clone omor-eva-511-... 91 2e-16
(Q9P0P0) RecName: Full=RING finger protein 181; &AC016753_5(AC0... 90 3e-16
AL391144_20(AL391144|pid:none) Arabidopsis thaliana DNA chromoso... 90 3e-16
(Q3T0W3) RecName: Full=RING finger protein 181; &BC102230_1(BC1... 90 4e-16
AK068144_1(AK068144|pid:none) Oryza sativa Japonica Group cDNA c... 90 4e-16
EU963676_1(EU963676|pid:none) Zea mays clone 265678 RHC1A mRNA, ... 90 4e-16
CR848559_1(CR848559|pid:none) Xenopus tropicalis finished cDNA, ... 89 5e-16
AL133314_14(AL133314|pid:none) Arabidopsis thaliana DNA chromoso... 89 5e-16
AL357612_8(AL357612|pid:none) Arabidopsis thaliana DNA chromosom... 89 5e-16
AE014297_876(AE014297|pid:none) Drosophila melanogaster chromoso... 89 5e-16
(Q6DIP3) RecName: Full=RING finger protein 126; &BC075492_1(BC0... 89 5e-16
AC004473_23(AC004473|pid:none) Arabidopsis thaliana chromosome 1... 89 5e-16
AK117658_1(AK117658|pid:none) Arabidopsis thaliana At5g08139 mRN... 89 5e-16
EU824018_1(EU824018|pid:none) Populus tremula isolate swl312-16 ... 89 5e-16
AM485058_5(AM485058|pid:none) Vitis vinifera contig VV78X234046.... 89 7e-16
BT036735_1(BT036735|pid:none) Zea mays full-length cDNA clone ZM... 89 7e-16
EU959798_1(EU959798|pid:none) Zea mays clone 220058 RHC1A mRNA, ... 89 7e-16
AM453292_2(AM453292|pid:none) Vitis vinifera contig VV78X262046.... 89 7e-16
AY052711_1(AY052711|pid:none) Arabidopsis thaliana AT5g59550/f2o... 89 7e-16
BT051302_1(BT051302|pid:none) Medicago truncatula clone MTYF1_F2... 89 7e-16
(Q7T0Q3) RecName: Full=RING finger protein 126-A; &BC056088_1(B... 89 9e-16
(Q9Y4L5) RecName: Full=RING finger protein 115; AltName: Full=Zi... 89 9e-16
AL079314_1(AL079314|pid:none) Homo sapiens mRNA full length inse... 89 9e-16
AC097175_11(AC097175|pid:none) Oryza sativa (japonica cultivar-g... 88 1e-15
AP000836_16(AP000836|pid:none) Oryza sativa Japonica Group genom... 88 1e-15
AM454201_1(AM454201|pid:none) Vitis vinifera contig VV79X002445.... 88 1e-15
AC003000_2(AC003000|pid:none) Arabidopsis thaliana chromosome 2 ... 87 2e-15
EF147412_1(EF147412|pid:none) Populus trichocarpa clone WS01230_... 87 2e-15
CU638743_227(CU638743|pid:none) Podospora anserina genomic DNA c... 87 2e-15
(Q6IRP0) RecName: Full=RING finger protein 126-B; &BC070697_1(B... 87 2e-15
AE017345_324(AE017345|pid:none) Cryptococcus neoformans var. neo... 87 3e-15
AL022223_17(AL022223|pid:none) Arabidopsis thaliana DNA chromoso... 87 3e-15
(Q7ZW78) RecName: Full=RING finger protein 181; &CU041374_16(CU... 87 3e-15
AM450723_2(AM450723|pid:none) Vitis vinifera contig VV78X016220.... 87 3e-15
AK066326_1(AK066326|pid:none) Oryza sativa Japonica Group cDNA c... 87 3e-15
AM464293_2(AM464293|pid:none) Vitis vinifera contig VV78X098348.... 86 4e-15
AP008212_1606(AP008212|pid:none) Oryza sativa (japonica cultivar... 86 4e-15
AL356173_8(AL356173|pid:none) Neurospora crassa DNA linkage grou... 86 6e-15
BT053897_1(BT053897|pid:none) Zea mays full-length cDNA clone ZM... 86 7e-15
BT066953_1(BT066953|pid:none) Zea mays full-length cDNA clone ZM... 86 7e-15
EU965176_1(EU965176|pid:none) Zea mays clone 284301 protein bind... 86 7e-15
AK008329_1(AK008329|pid:none) Mus musculus adult male small inte... 85 9e-15
BT034303_1(BT034303|pid:none) Zea mays full-length cDNA clone ZM... 85 9e-15
AK103314_1(AK103314|pid:none) Oryza sativa Japonica Group cDNA c... 85 9e-15
EU960255_1(EU960255|pid:none) Zea mays clone 222914 RHC1A mRNA, ... 85 1e-14
BT033181_1(BT033181|pid:none) Zea mays full-length cDNA clone ZM... 85 1e-14
AF045453_1(AF045453|pid:none) Dictyostelium discoideum protein k... 66 2e-14
(Q54QV3) RecName: Full=Probable serine/threonine-protein kinase ... 66 2e-14
BC079688_1(BC079688|pid:none) Xenopus laevis MGC80300 protein, m... 83 4e-14
AK014094_1(AK014094|pid:none) Mus musculus 13 days embryo head c... 83 4e-14
BT010696_1(BT010696|pid:none) Arabidopsis thaliana At1g68180 mRN... 83 4e-14
EU965227_1(EU965227|pid:none) Zea mays clone 284641 hypothetical... 83 5e-14
BC168458_1(BC168458|pid:none) Xenopus tropicalis cDNA clone MGC:... 83 5e-14
DQ415921_17(DQ415921|pid:none) Cleome spinosa clone BAC Cs2, com... 83 5e-14
EU969915_1(EU969915|pid:none) Zea mays clone 337224 RHC1A mRNA, ... 83 5e-14
EU956162_1(EU956162|pid:none) Zea mays clone 1558311 RHC1A mRNA,... 83 5e-14
AK241435_1(AK241435|pid:none) Oryza sativa Japonica Group cDNA, ... 82 6e-14
BT001518_1(BT001518|pid:none) Drosophila melanogaster LP11469 fu... 82 1e-13
(Q9VE61) RecName: Full=RING finger protein 181 homolog; &AE0142... 82 1e-13
BT048669_1(BT048669|pid:none) Salmo salar clone ssal-evd-554-047... 82 1e-13
BT039305_1(BT039305|pid:none) Zea mays full-length cDNA clone ZM... 81 2e-13
AK106003_1(AK106003|pid:none) Oryza sativa Japonica Group cDNA c... 80 3e-13
AC129090_8(AC129090|pid:none) Medicago truncatula clone mth2-14i... 79 5e-13
BT037831_1(BT037831|pid:none) Zea mays full-length cDNA clone ZM... 79 9e-13
AK229330_1(AK229330|pid:none) Arabidopsis thaliana mRNA for hypo... 78 1e-12
DQ213806_1(DQ213806|pid:none) Taeniopygia guttata clone 0061P001... 78 2e-12
AC007576_29(AC007576|pid:none) Arabidopsis thaliana chromosome I... 78 2e-12
EF145460_1(EF145460|pid:none) Populus trichocarpa clone WS01125_... 77 2e-12
BT037505_1(BT037505|pid:none) Zea mays full-length cDNA clone ZM... 77 3e-12
EU959574_1(EU959574|pid:none) Zea mays clone 218670 unknown mRNA. 76 6e-12
BT037563_1(BT037563|pid:none) Zea mays full-length cDNA clone ZM... 75 8e-12
EF148378_1(EF148378|pid:none) Populus trichocarpa x Populus delt... 74 2e-11
EF147124_1(EF147124|pid:none) Populus trichocarpa clone WS01227_... 74 2e-11
EU961756_1(EU961756|pid:none) Zea mays clone 238102 unknown mRNA. 73 4e-11
FN357418_27(FN357418|pid:none) Schistosoma mansoni genome sequen... 72 1e-10
FN357418_28(FN357418|pid:none) Schistosoma mansoni genome sequen... 72 1e-10
EU955607_1(EU955607|pid:none) Zea mays clone 1539371 unknown mRNA. 70 2e-10
AM269999_3(AM269999|pid:none) Aspergillus niger contig An02c0040... 69 9e-10
AP003251_4(AP003251|pid:none) Oryza sativa Japonica Group genomi... 68 2e-09
AP005871_22(AP005871|pid:none) Oryza sativa Japonica Group genom... 67 2e-09
BC048323_1(BC048323|pid:none) Homo sapiens praja ring finger 1, ... 67 3e-09
BT062731_1(BT062731|pid:none) Zea mays full-length cDNA clone ZM... 67 3e-09
BC068671_1(BC068671|pid:none) Xenopus laevis hypothetical protei... 67 3e-09
AM270371_28(AM270371|pid:none) Aspergillus niger contig An16c019... 67 3e-09
BT026528_1(BT026528|pid:none) Bos taurus praja 1 (PJA1), mRNA, c... 67 3e-09
AC005496_5(AC005496|pid:none) Arabidopsis thaliana chromosome 2 ... 66 5e-09
(Q80U04) RecName: Full=E3 ubiquitin-protein ligase Praja2; ... 66 6e-09
AK122282_1(AK122282|pid:none) Mus musculus mRNA for mKIAA0438 pr... 66 6e-09
CR749579_1(CR749579|pid:none) Homo sapiens mRNA; cDNA DKFZp779F2... 66 6e-09
BC150108_1(BC150108|pid:none) Bos taurus praja ring finger 2, mR... 66 6e-09
CR860713_1(CR860713|pid:none) Pongo abelii mRNA; cDNA DKFZp459D0... 66 6e-09
(Q63364) RecName: Full=E3 ubiquitin-protein ligase Praja2; ... 66 6e-09
BC030826_1(BC030826|pid:none) Homo sapiens praja ring finger 2, ... 66 6e-09
CR861158_1(CR861158|pid:none) Pongo abelii mRNA; cDNA DKFZp459L1... 65 8e-09
AL831752_2(AL831752|pid:none) Mouse DNA sequence from clone RP23... 65 8e-09
AL157699_3(AL157699|pid:none) Human DNA sequence from clone RP13... 65 8e-09
AK135382_1(AK135382|pid:none) Mus musculus 12 days embryo female... 65 8e-09
BC081885_1(BC081885|pid:none) Rattus norvegicus similar to praja... 65 8e-09
AK290543_1(AK290543|pid:none) Homo sapiens cDNA FLJ78308 complet... 65 8e-09
AF264620_1(AF264620|pid:none) Homo sapiens PRAJA1BETA (PRAJA1BET... 65 8e-09
AK294632_1(AK294632|pid:none) Homo sapiens cDNA FLJ55052 complet... 65 8e-09
AK096611_1(AK096611|pid:none) Homo sapiens cDNA FLJ39292 fis, cl... 65 8e-09
AK005373_1(AK005373|pid:none) Mus musculus adult male cerebellum... 65 8e-09
(O55176) RecName: Full=E3 ubiquitin-protein ligase Praja1; ... 65 8e-09
AL831752_1(AL831752|pid:none) Mouse DNA sequence from clone RP23... 65 8e-09
AK021892_1(AK021892|pid:none) Homo sapiens cDNA FLJ11830 fis, cl... 65 8e-09
AF335251_1(AF335251|pid:none) Mus musculus Praja1 isoform c (Pja... 65 8e-09
AB171443_1(AB171443|pid:none) Macaca fascicularis brain cDNA clo... 65 8e-09
AK293266_1(AK293266|pid:none) Homo sapiens cDNA FLJ53433 complet... 65 8e-09
AM469216_4(AM469216|pid:none) Vitis vinifera contig VV78X201907.... 65 1e-08
AK069888_1(AK069888|pid:none) Oryza sativa Japonica Group cDNA c... 64 2e-08
EF677296_1(EF677296|pid:none) Picea sitchensis clone WS02764_P13... 64 2e-08
CP000590_239(CP000590|pid:none) Ostreococcus lucimarinus CCE9901... 64 2e-08
G84530(G84530)probable RING-H2 zinc finger protein [imported] - ... 63 4e-08
AC024812_2(AC024812|pid:none) Caenorhabditis elegans cosmid Y54E... 63 4e-08
AP005720_22(AP005720|pid:none) Oryza sativa Japonica Group genom... 62 7e-08
EU962783_1(EU962783|pid:none) Zea mays clone 245493 protein bind... 62 7e-08
CP001160_180(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 62 9e-08
AC135606_14(AC135606|pid:none) Medicago truncatula clone mth2-10... 62 9e-08
EF083336_1(EF083336|pid:none) Picea sitchensis clone WS0289_N02 ... 62 9e-08
FJ225394_3(FJ225394|pid:none) Glycine max clone GM_WBb0070A12 de... 62 9e-08
AC004138_14(AC004138|pid:none) Arabidopsis thaliana chromosome 2... 61 1e-07
AC005764_1(AC005764|pid:none) Homo sapiens chromosome 19, cosmid... 61 1e-07
AM447686_2(AM447686|pid:none) Vitis vinifera contig VV78X003621.... 61 1e-07
BC017592_1(BC017592|pid:none) Homo sapiens zinc and ring finger ... 61 1e-07
(Q8WWF5) RecName: Full=Zinc/RING finger protein 4; AltName: Full... 61 1e-07
DQ465380_1(DQ465380|pid:none) Oreochromis mossambicus clone SSH ... 61 1e-07
BT064086_1(BT064086|pid:none) Zea mays full-length cDNA clone ZM... 60 3e-07
EF215411_1(EF215411|pid:none) Callithrix jacchus clone N15-44.2_... 60 3e-07
DQ987493_1(DQ987493|pid:none) Gibberella zeae RING-7 protein mRN... 60 3e-07
AK317090_1(AK317090|pid:none) Arabidopsis thaliana AT5G10650 mRN... 60 3e-07
AM435616_1(AM435616|pid:none) Vitis vinifera contig VV78X043637.... 60 3e-07
AY099680_1(AY099680|pid:none) Arabidopsis thaliana Pspzf zinc fi... 60 3e-07
BT015918_1(BT015918|pid:none) Arabidopsis thaliana At5g10650 gen... 60 3e-07
BC063734_1(BC063734|pid:none) Xenopus laevis hypothetical protei... 60 4e-07
AK175589_1(AK175589|pid:none) Arabidopsis thaliana mRNA for RING... 60 4e-07
EF677240_1(EF677240|pid:none) Picea sitchensis clone WS02764_C05... 59 6e-07
AP002066_3(AP002066|pid:none) Arabidopsis thaliana genomic DNA, ... 59 6e-07
AK154071_1(AK154071|pid:none) Mus musculus 2 days neonate thymus... 59 6e-07
EF215048_1(EF215048|pid:none) Callithrix jacchus clone P12-51.4_... 59 6e-07
AB024034_2(AB024034|pid:none) Arabidopsis thaliana genomic DNA, ... 59 6e-07
AK291027_1(AK291027|pid:none) Homo sapiens cDNA FLJ77466 complet... 59 6e-07
AK296769_1(AK296769|pid:none) Homo sapiens cDNA FLJ50102 complet... 59 6e-07
EU968621_1(EU968621|pid:none) Zea mays clone 322877 unknown mRNA. 59 6e-07
CR627423_1(CR627423|pid:none) Homo sapiens mRNA; cDNA DKFZp781H0... 59 6e-07
BC056113_1(BC056113|pid:none) Xenopus laevis hypothetical protei... 59 6e-07
AK299024_1(AK299024|pid:none) Homo sapiens cDNA FLJ51697 complet... 59 6e-07
(Q68DV7) RecName: Full=RING finger protein 43; Flags: Precursor;... 59 6e-07
AY086602_1(AY086602|pid:none) Arabidopsis thaliana clone 261272 ... 59 7e-07
EU965111_1(EU965111|pid:none) Zea mays clone 283897 ubiquitin-pr... 59 7e-07
AL627187_2(AL627187|pid:none) Mouse DNA sequence from clone RP23... 59 7e-07
AF171875_1(AF171875|pid:none) Mus musculus g1-related zinc finge... 59 7e-07
(Q8VEM1) RecName: Full=Goliath homolog; AltName: Full=RING finge... 59 7e-07
CR954206_431(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 59 7e-07
AF428290_1(AF428290|pid:none) Arabidopsis thaliana At1g17970/F2H... 59 7e-07
BX957281_1(BX957281|pid:none) Zebrafish DNA sequence from clone ... 59 7e-07
AK101391_1(AK101391|pid:none) Oryza sativa Japonica Group cDNA c... 59 1e-06
(Q9H6Y7) RecName: Full=E3 ubiquitin-protein ligase RNF167; ... 59 1e-06
AK000322_1(AK000322|pid:none) Homo sapiens cDNA FLJ20315 fis, cl... 59 1e-06
AF155650_1(AF155650|pid:none) Human mRNA for goliath protein. &... 59 1e-06
EU953133_1(EU953133|pid:none) Zea mays clone 1385620 protein bin... 59 1e-06
BC142200_1(BC142200|pid:none) Bos taurus ring finger protein 130... 59 1e-06
BC166566_1(BC166566|pid:none) Rattus norvegicus ring finger prot... 59 1e-06
AK133955_1(AK133955|pid:none) Mus musculus 8 days embryo whole b... 59 1e-06
BC017100_1(BC017100|pid:none) Homo sapiens ring finger protein 1... 59 1e-06
AB081837_1(AB081837|pid:none) Homo sapiens urcc mRNA, complete c... 59 1e-06
AM883105_1(AM883105|pid:none) Spinacia oleracea mRNA for NEP1-in... 59 1e-06
(Q86XS8) RecName: Full=Goliath homolog; AltName: Full=RING finge... 59 1e-06
FB817272_1(FB817272|pid:none) Sequence 36545 from Patent WO20080... 58 1e-06
AY084480_1(AY084480|pid:none) Arabidopsis thaliana clone 109181 ... 58 1e-06
BC124034_1(BC124034|pid:none) Xenopus tropicalis ring finger pro... 58 1e-06
AM433861_1(AM433861|pid:none) Vitis vinifera contig VV78X073759.... 58 1e-06
AK130520_1(AK130520|pid:none) Homo sapiens cDNA FLJ27010 fis, cl... 58 1e-06
(Q9ULK6) RecName: Full=RING finger protein 150; Flags: Precursor; 58 1e-06
AB033040_1(AB033040|pid:none) Homo sapiens mRNA for KIAA1214 pro... 58 1e-06
BC101992_1(BC101992|pid:none) Homo sapiens ring finger protein 1... 58 1e-06
AP007171_583(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 58 1e-06
BT050613_1(BT050613|pid:none) Medicago truncatula clone MTYF1_F2... 58 1e-06
AB384141_1(AB384141|pid:none) Synthetic construct DNA, clone: pF... 58 1e-06
(Q6NRX0) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 58 1e-06
AL050060_1(AL050060|pid:none) Homo sapiens mRNA; cDNA DKFZp566H0... 58 1e-06
(Q5XIL0) RecName: Full=E3 ubiquitin-protein ligase RNF167; ... 58 1e-06
BC168034_1(BC168034|pid:none) Xenopus tropicalis cDNA clone MGC:... 58 2e-06
AK122819_1(AK122819|pid:none) Homo sapiens cDNA FLJ16418 fis, cl... 58 2e-06
(Q6ZSG1) RecName: Full=RING finger protein 165; &AK127467_1(AK1... 58 2e-06
BT045365_1(BT045365|pid:none) Salmo salar clone ssal-rgf-519-156... 58 2e-06
FB746686_1(FB746686|pid:none) Sequence 153 from Patent EP1903111. 58 2e-06
AY533211_1(AY533211|pid:none) Chinchilla lanigera goliath protei... 58 2e-06
CR759821_1(CR759821|pid:none) Zebrafish DNA sequence from clone ... 57 2e-06
FB817268_1(FB817268|pid:none) Sequence 36541 from Patent WO20080... 57 2e-06
(Q6NRV8) RecName: Full=E3 ubiquitin-protein ligase arkadia-B; ... 57 2e-06
BT068198_1(BT068198|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-06
FN392322_444(FN392322|pid:none) Pichia pastoris GS115 chromosome... 57 2e-06
BT035443_1(BT035443|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-06
BC135901_1(BC135901|pid:none) Xenopus tropicalis hypothetical pr... 57 2e-06
BC154845_1(BC154845|pid:none) Xenopus tropicalis hypothetical pr... 57 2e-06
BT054768_1(BT054768|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-06
EU966425_1(EU966425|pid:none) Zea mays clone 294406 protein bind... 57 2e-06
BT035414_1(BT035414|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-06
CT737139_3(CT737139|pid:none) Zebrafish DNA sequence from clone ... 57 3e-06
CR925810_3(CR925810|pid:none) Zebrafish DNA sequence from clone ... 57 3e-06
BC065620_1(BC065620|pid:none) Danio rerio ring finger protein 13... 57 3e-06
(Q0VD51) RecName: Full=RING finger protein 13; &BC119833_1(BC11... 57 4e-06
AK096397_1(AK096397|pid:none) Homo sapiens cDNA FLJ39078 fis, cl... 57 4e-06
AK133342_1(AK133342|pid:none) Mus musculus adult male testis cDN... 57 4e-06
(Q9ULT6) RecName: Full=Zinc/RING finger protein 3; AltName: Full... 57 4e-06
BT045963_1(BT045963|pid:none) Salmo salar clone ssal-rgf-537-317... 57 4e-06
EU961155_1(EU961155|pid:none) Zea mays clone 232985 protein bind... 57 4e-06
AK090771_1(AK090771|pid:none) Homo sapiens cDNA FLJ33452 fis, cl... 57 4e-06
AK131304_1(AK131304|pid:none) Homo sapiens cDNA FLJ16278 fis, cl... 57 4e-06
AK167278_1(AK167278|pid:none) Mus musculus blastocyst blastocyst... 57 4e-06
(O43567) RecName: Full=RING finger protein 13; &(Q5RCV8) RecNam... 57 4e-06
AM910995_268(AM910995|pid:none) Plasmodium knowlesi strain H chr... 57 4e-06
AB051436_1(AB051436|pid:none) Homo sapiens mRNA for KIAA1133 pro... 57 4e-06
(Q9ZT50) RecName: Full=RING-H2 zinc finger protein RHA2a; &AC00... 57 4e-06
EU969856_1(EU969856|pid:none) Zea mays clone 336516 hypothetical... 57 4e-06
(Q5SSZ7) RecName: Full=Zinc/RING finger protein 3; Flags: Precur... 57 4e-06
AB384120_1(AB384120|pid:none) Synthetic construct DNA, clone: pF... 57 4e-06
BC151080_1(BC151080|pid:none) Mus musculus zinc and ring finger ... 57 4e-06
EU954860_1(EU954860|pid:none) Zea mays clone 1488123 protein bin... 56 5e-06
AK095327_1(AK095327|pid:none) Homo sapiens cDNA FLJ38008 fis, cl... 56 5e-06
(Q566M8) RecName: Full=RING finger protein 150; Flags: Precursor... 56 5e-06
BC147931_1(BC147931|pid:none) Bos taurus ring finger protein 111... 56 5e-06
BT051138_1(BT051138|pid:none) Medicago truncatula clone MTYFP_FQ... 56 5e-06
(Q6ZNA4) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 56 5e-06
AC084296_17(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJ... 56 5e-06
BT061149_1(BT061149|pid:none) Zea mays full-length cDNA clone ZM... 56 5e-06
AC009177_16(AC009177|pid:none) Arabidopsis thaliana chromosome I... 56 5e-06
FB817276_1(FB817276|pid:none) Sequence 36549 from Patent WO20080... 56 5e-06
(Q99ML9) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 56 5e-06
AK131488_1(AK131488|pid:none) Homo sapiens cDNA FLJ16671 fis, cl... 56 5e-06
BC095880_1(BC095880|pid:none) Danio rerio zgc:113271, mRNA (cDNA... 56 5e-06
(Q8GT75) RecName: Full=RING-H2 finger protein ATL4M; AltName: Fu... 56 5e-06
EU952645_1(EU952645|pid:none) Zea mays clone 1285281 protein bin... 56 5e-06
AB006707_5(AB006707|pid:none) Arabidopsis thaliana genomic DNA, ... 56 6e-06
EU974130_1(EU974130|pid:none) Zea mays clone 440705 zinc finger,... 56 6e-06
FB817232_1(FB817232|pid:none) Sequence 36505 from Patent WO20080... 56 6e-06
(Q3U2C5) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 56 6e-06
(Q8NC42) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 56 6e-06
AK067456_1(AK067456|pid:none) Oryza sativa Japonica Group cDNA c... 56 6e-06
AC011809_11(AC011809|pid:none) Arabidopsis thaliana chromosome I... 56 6e-06
AP004159_2(AP004159|pid:none) Oryza sativa Japonica Group genomi... 56 6e-06
AP004818_17(AP004818|pid:none) Oryza sativa Japonica Group genom... 56 6e-06
AY735516_1(AY735516|pid:none) Arabidopsis thaliana hypothetical ... 56 6e-06
(O64763) RecName: Full=RING-H2 finger protein ATL2G; AltName: Fu... 56 6e-06
AC013722_2(AC013722|pid:none) Homo sapiens BAC clone RP11-299H21... 56 6e-06
EU970593_1(EU970593|pid:none) Zea mays clone 347660 zinc finger,... 56 6e-06
AB463234_1(AB463234|pid:none) Synthetic construct DNA, clone: pF... 56 6e-06
FB844022_1(FB844022|pid:none) Sequence 63295 from Patent WO20080... 56 6e-06
AF124144_1(AF124144|pid:none) Mus musculus autocrine motility fa... 56 6e-06
AK155360_1(AK155360|pid:none) Mus musculus NOD-derived CD11c +ve... 56 6e-06
AC145165_9(AC145165|pid:none) Medicago truncatula clone mth2-4j2... 56 6e-06
GM977105_1(GM977105|pid:none) Sequence 13 from Patent WO20081456... 56 6e-06
EU965288_1(EU965288|pid:none) Zea mays clone 285047 zinc finger,... 56 6e-06
BT071558_1(BT071558|pid:none) Picea sitchensis clone WS02924_J14... 56 6e-06
AC145165_11(AC145165|pid:none) Medicago truncatula clone mth2-4j... 56 6e-06
(Q84TF5) RecName: Full=RING-H2 zinc finger protein RHA4a; &AK22... 56 6e-06
AK227673_1(AK227673|pid:none) Arabidopsis thaliana mRNA for hypo... 56 6e-06
AK118593_1(AK118593|pid:none) Arabidopsis thaliana At2g17730 mRN... 55 8e-06
AM467682_1(AM467682|pid:none) Vitis vinifera contig VV78X221997.... 55 8e-06
EU952879_1(EU952879|pid:none) Zea mays clone 1292250 hypothetica... 55 8e-06
AM475468_1(AM475468|pid:none) Vitis vinifera contig VV78X075450.... 55 8e-06
BT041832_1(BT041832|pid:none) Zea mays full-length cDNA clone ZM... 55 8e-06
BC148207_1(BC148207|pid:none) Homo sapiens cDNA clone IMAGE:4011... 55 8e-06
AM464982_3(AM464982|pid:none) Vitis vinifera contig VV78X061842.... 55 8e-06
(Q9UKV5) RecName: Full=Autocrine motility factor receptor, isofo... 55 8e-06
AK227950_1(AK227950|pid:none) Arabidopsis thaliana mRNA for RING... 55 8e-06
AK066238_1(AK066238|pid:none) Oryza sativa Japonica Group cDNA c... 55 8e-06
CR954210_145(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 55 8e-06
AC079674_7(AC079674|pid:none) Arabidopsis thaliana chromosome 1 ... 55 8e-06
AL606622_9(AL606622|pid:none) Oryza sativa genomic DNA, chromoso... 55 8e-06
(Q8GT74) RecName: Full=RING-H2 finger protein ATL2B; AltName: Fu... 55 8e-06
CQ834480_1(CQ834480|pid:none) Sequence 351 from Patent WO2004058... 55 8e-06
BC159083_1(BC159083|pid:none) Xenopus tropicalis hypothetical pr... 55 1e-05
BC010369_1(BC010369|pid:none) Homo sapiens ring finger protein 1... 55 1e-05
(Q07G42) RecName: Full=E3 ubiquitin-protein ligase rnf12; ... 55 1e-05
AX405832_1(AX405832|pid:none) Sequence 247 from Patent WO0222660. 55 1e-05
(Q66J97) RecName: Full=E3 ubiquitin-protein ligase arkadia-C; ... 55 1e-05
AY168924_1(AY168924|pid:none) Arabidopsis thaliana RES protein (... 55 1e-05
AC126786_7(AC126786|pid:none) Medicago truncatula clone mth2-8c2... 55 1e-05
(Q5R476) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 55 1e-05
BT061354_1(BT061354|pid:none) Zea mays full-length cDNA clone ZM... 55 1e-05
AC091774_10(AC091774|pid:none) Oryza sativa chromosome 6 BAC OJ1... 55 1e-05
AB025631_16(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 55 1e-05
BC112457_1(BC112457|pid:none) Bos taurus autocrine motility fact... 55 1e-05
FB817274_1(FB817274|pid:none) Sequence 36547 from Patent WO20080... 55 1e-05
(Q90ZT7) RecName: Full=E3 ubiquitin-protein ligase arkadia-A; ... 55 1e-05
AK048110_1(AK048110|pid:none) Mus musculus 16 days embryo head c... 55 1e-05
FN357583_23(FN357583|pid:none) Schistosoma mansoni genome sequen... 55 1e-05
(Q66HG0) RecName: Full=RING finger protein 13; &BC081881_1(BC08... 55 1e-05
AF329846_1(AF329846|pid:none) Gallus gallus ring finger protein ... 55 1e-05
AL157474_1(AL157474|pid:none) Homo sapiens mRNA; cDNA DKFZp761D0... 55 1e-05
AB169185_1(AB169185|pid:none) Macaca fascicularis testis cDNA, c... 55 1e-05
(Q90972) RecName: Full=RING finger protein 13; AltName: Full=C-R... 55 1e-05
AK158046_1(AK158046|pid:none) Mus musculus adult inner ear cDNA,... 55 1e-05
EF086824_1(EF086824|pid:none) Picea sitchensis clone WS02711_F11... 55 1e-05
BC057411_1(BC057411|pid:none) Danio rerio autocrine motility fac... 55 1e-05
AL161577_3(AL161577|pid:none) Arabidopsis thaliana DNA chromosom... 55 1e-05
AY054187_1(AY054187|pid:none) Arabidopsis thaliana AT4g30400/F17... 55 1e-05
BC060333_1(BC060333|pid:none) Xenopus laevis hypothetical protei... 55 1e-05
AY084453_1(AY084453|pid:none) Arabidopsis thaliana clone 108568 ... 55 1e-05
(Q9WTV7) RecName: Full=E3 ubiquitin-protein ligase RNF12; ... 55 1e-05
(Q7T037) RecName: Full=E3 ubiquitin-protein ligase rnf12-B; ... 55 1e-05
AB114041_1(AB114041|pid:none) Xenopus laevis XRnf12C mRNA for XR... 55 1e-05
BX538130_1(BX538130|pid:none) Homo sapiens mRNA; cDNA DKFZp686H1... 55 1e-05
AB168929_1(AB168929|pid:none) Macaca fascicularis testis cDNA, c... 55 1e-05
BT066938_1(BT066938|pid:none) Zea mays full-length cDNA clone ZM... 55 1e-05
BC017878_1(BC017878|pid:none) Homo sapiens ring finger protein 1... 55 1e-05
CU041374_17(CU041374|pid:none) Zebrafish DNA sequence from clone... 55 1e-05
AM473379_1(AM473379|pid:none) Vitis vinifera contig VV78X073156.... 55 1e-05
CU633438_520(CU633438|pid:none) Podospora anserina genomic DNA c... 55 1e-05
AK293272_1(AK293272|pid:none) Homo sapiens cDNA FLJ53858 complet... 55 1e-05
AC150244_12(AC150244|pid:none) Medicago truncatula chromosome 7 ... 55 1e-05
(Q9Y252) RecName: Full=RING finger protein 6; AltName: Full=RING... 55 1e-05
AK068669_1(AK068669|pid:none) Oryza sativa Japonica Group cDNA c... 55 1e-05
AK061459_1(AK061459|pid:none) Oryza sativa Japonica Group cDNA c... 55 1e-05
BC138545_1(BC138545|pid:none) Mus musculus ring finger protein (... 55 1e-05
(Q641J8) RecName: Full=E3 ubiquitin-protein ligase rnf12-A; ... 55 1e-05
BT039449_1(BT039449|pid:none) Zea mays full-length cDNA clone ZM... 55 1e-05
BT067018_1(BT067018|pid:none) Zea mays full-length cDNA clone ZM... 54 2e-05
EU969154_1(EU969154|pid:none) Zea mays clone 326453 unknown mRNA. 54 2e-05
AP004048_21(AP004048|pid:none) Oryza sativa Japonica Group genom... 54 2e-05
AP008218_1276(AP008218|pid:none) Oryza sativa (japonica cultivar... 54 2e-05
BC097491_1(BC097491|pid:none) Rattus norvegicus ring finger prot... 54 2e-05
(Q8LGA5) RecName: Full=RING-H2 finger protein ATL5H; Flags: Prec... 54 2e-05
JC1495(JC1495) regulatory protein G1 - fruit fly (Drosophila mel... 54 2e-05
AL691424_3(AL691424|pid:none) Mouse DNA sequence from clone RP23... 54 2e-05
AB168660_1(AB168660|pid:none) Macaca fascicularis testis cDNA cl... 54 2e-05
AJ271670_1(AJ271670|pid:none) Homo sapiens Rnf12 gene for RING z... 54 2e-05
BT062474_1(BT062474|pid:none) Zea mays full-length cDNA clone ZM... 54 2e-05
AP004818_15(AP004818|pid:none) Oryza sativa Japonica Group genom... 54 2e-05
AP005511_13(AP005511|pid:none) Oryza sativa Japonica Group genom... 54 2e-05
AK004847_1(AK004847|pid:none) Mus musculus adult male liver cDNA... 54 2e-05
(Q9FKX5) RecName: Full=RING-H2 finger protein ATL5P; &AB011474_... 54 2e-05
(Q0IJ20) RecName: Full=RING finger protein 145; &BC121248_1(BC1... 54 2e-05
BC074178_1(BC074178|pid:none) Xenopus laevis MGC82010 protein, m... 54 2e-05
BT015305_1(BT015305|pid:none) Drosophila melanogaster AT15166 fu... 54 2e-05
AE014187_51(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 54 2e-05
AK070774_1(AK070774|pid:none) Oryza sativa Japonica Group cDNA c... 54 2e-05
AK001334_1(AK001334|pid:none) Homo sapiens cDNA FLJ10472 fis, cl... 54 2e-05
AB041548_1(AB041548|pid:none) Mus musculus brain cDNA, clone MNC... 54 2e-05
AK146266_1(AK146266|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 54 2e-05
BT015731_1(BT015731|pid:none) Arabidopsis thaliana At4g28890 mRN... 54 2e-05
AF155109_1(AF155109|pid:none) Homo sapiens putative ring zinc fi... 54 2e-05
AY084377_1(AY084377|pid:none) Arabidopsis thaliana clone 106078 ... 54 2e-05
AE013599_4255(AE013599|pid:none) Drosophila melanogaster chromos... 54 2e-05
AC084022_27(AC084022|pid:none) Oryza sativa chromosome 3 BAC OSJ... 54 2e-05
AM910992_26(AM910992|pid:none) Plasmodium knowlesi strain H chro... 54 2e-05
AE014297_1407(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-05
BT086527_1(BT086527|pid:none) Zea mays full-length cDNA clone ZM... 54 2e-05
AF386995_1(AF386995|pid:none) Arabidopsis thaliana putative prot... 54 2e-05
(Q9D304) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 54 2e-05
BT036827_1(BT036827|pid:none) Zea mays full-length cDNA clone ZM... 54 2e-05
AK075101_1(AK075101|pid:none) Homo sapiens cDNA FLJ90620 fis, cl... 54 2e-05
AC135467_5(AC135467|pid:none) Medicago truncatula clone mth2-34h... 54 2e-05
CT573450_1(CT573450|pid:none) Zebrafish DNA sequence from clone ... 54 2e-05
(Q8BP31) RecName: Full=RING finger protein 122; &AK077856_1(AK0... 54 2e-05
AK103147_1(AK103147|pid:none) Oryza sativa Japonica Group cDNA c... 54 2e-05
AK304228_1(AK304228|pid:none) Homo sapiens cDNA FLJ55623 complet... 54 2e-05
BC042684_1(BC042684|pid:none) Homo sapiens ring finger protein 1... 54 2e-05
BT035302_1(BT035302|pid:none) Zea mays full-length cDNA clone ZM... 54 2e-05
AK294323_1(AK294323|pid:none) Homo sapiens cDNA FLJ60012 complet... 54 2e-05
AL031620_5(AL031620|pid:none) Caenorhabditis elegans Cosmid C18B... 54 2e-05
(Q96MT1) RecName: Full=RING finger protein 145; &AX213274_1(AX2... 54 2e-05
(Q9H9V4) RecName: Full=RING finger protein 122; &BC093884_1(BC0... 54 2e-05
AB008264_13(AB008264|pid:none) Arabidopsis thaliana genomic DNA,... 54 2e-05
AC144514_21(AC144514|pid:none) Medicago truncatula clone mth2-12... 54 2e-05
BC050268_1(BC050268|pid:none) Mus musculus ring finger protein 1... 54 2e-05
BT059560_1(BT059560|pid:none) Salmo salar clone ssal-rgf-532-263... 54 2e-05
AK022588_1(AK022588|pid:none) Homo sapiens cDNA FLJ12526 fis, cl... 54 2e-05
AJ867480_1(AJ867480|pid:none) Zinnia elegans rh2.1 gene for RING... 54 2e-05
BC149767_1(BC149767|pid:none) Bos taurus ring finger protein 145... 54 2e-05
AP005511_7(AP005511|pid:none) Oryza sativa Japonica Group genomi... 54 2e-05
BC148080_1(BC148080|pid:none) Bos taurus ring finger protein 145... 54 2e-05
AK056513_1(AK056513|pid:none) Homo sapiens cDNA FLJ31951 fis, cl... 54 2e-05
AP005511_10(AP005511|pid:none) Oryza sativa Japonica Group genom... 54 2e-05
AK063978_1(AK063978|pid:none) Oryza sativa Japonica Group cDNA c... 54 3e-05
AY086760_1(AY086760|pid:none) Arabidopsis thaliana clone 27464 m... 54 3e-05
BT034938_1(BT034938|pid:none) Zea mays full-length cDNA clone ZM... 54 3e-05
AP008207_648(AP008207|pid:none) Oryza sativa (japonica cultivar-... 54 3e-05
(P30631) RecName: Full=Uncharacterized RING finger protein ZK637... 54 3e-05
DQ885600_1(DQ885600|pid:none) Bubalus bubalis ring finger protei... 54 3e-05
(Q29RU0) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 54 3e-05
AF385699_1(AF385699|pid:none) Arabidopsis thaliana AT3g15070/K15... 54 3e-05
AB017070_2(AB017070|pid:none) Arabidopsis thaliana genomic DNA, ... 54 3e-05
AK065626_1(AK065626|pid:none) Oryza sativa Japonica Group cDNA c... 54 3e-05
EU963483_1(EU963483|pid:none) Zea mays clone 263125 RING-H2 fing... 54 3e-05
AC148486_14(AC148486|pid:none) Medicago truncatula clone mth2-56... 54 3e-05
AY088181_1(AY088181|pid:none) Arabidopsis thaliana clone 426 mRN... 54 3e-05
AP004880_11(AP004880|pid:none) Oryza sativa Japonica Group genom... 54 3e-05
AF079183_1(AF079183|pid:none) Arabidopsis thaliana RING-H2 finge... 54 3e-05
BC160840_1(BC160840|pid:none) Rattus norvegicus ring finger prot... 54 3e-05
AP008208_2471(AP008208|pid:none) Oryza sativa (japonica cultivar... 54 3e-05
AM920437_1943(AM920437|pid:none) Penicillium chrysogenum Wiscons... 54 3e-05
AM440441_1(AM440441|pid:none) Vitis vinifera contig VV78X146533.... 54 3e-05
BC167061_1(BC167061|pid:none) Rattus norvegicus ring finger prot... 54 3e-05
BT068349_1(BT068349|pid:none) Zea mays full-length cDNA clone ZM... 54 3e-05
AP000370_21(AP000370|pid:none) Arabidopsis thaliana genomic DNA,... 54 3e-05
AK068075_1(AK068075|pid:none) Oryza sativa Japonica Group cDNA c... 54 3e-05
AP003450_26(AP003450|pid:none) Oryza sativa Japonica Group genom... 54 3e-05
AF394689_1(AF394689|pid:none) Homo sapiens GRAIL (GRAIL) mRNA, c... 54 3e-05
AK226506_1(AK226506|pid:none) Arabidopsis thaliana mRNA for hypo... 53 4e-05
BC055485_1(BC055485|pid:none) Mus musculus ring finger protein 1... 53 4e-05
AF424605_1(AF424605|pid:none) Arabidopsis thaliana AT4g31450/F3L... 53 4e-05
EU967964_1(EU967964|pid:none) Zea mays clone 311994 unknown mRNA. 53 4e-05
(Q8TEB7) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 53 4e-05
EU960604_1(EU960604|pid:none) Zea mays clone 226548 protein bind... 53 4e-05
AY813963_1(AY813963|pid:none) Schistosoma japonicum SJCHGC06094 ... 53 4e-05
(Q5BIY5) RecName: Full=RING finger protein 145; &BC091708_1(BC0... 53 4e-05
CR859911_1(CR859911|pid:none) Pongo abelii mRNA; cDNA DKFZp469I1... 53 4e-05
AC013482_19(AC013482|pid:none) Genomic sequence for Arabidopsis ... 53 4e-05
AK126553_1(AK126553|pid:none) Homo sapiens cDNA FLJ44589 fis, cl... 53 4e-05
AC025783_2(AC025783|pid:none) Oryza sativa chromosome 10 BAC OSJ... 53 4e-05
AM445444_2(AM445444|pid:none) Vitis vinifera contig VV78X011470.... 53 4e-05
(Q5SWK7) RecName: Full=RING finger protein 145; &AL603913_1(AL6... 53 4e-05
AK043002_1(AK043002|pid:none) Mus musculus 7 days neonate cerebe... 53 4e-05
BC051064_1(BC051064|pid:none) Mus musculus ring finger protein 1... 53 4e-05
EF085630_1(EF085630|pid:none) Picea sitchensis clone WS0297_H06 ... 53 4e-05
AK014408_1(AK014408|pid:none) Mus musculus 12 days embryo embryo... 53 4e-05
BT043283_1(BT043283|pid:none) Zea mays full-length cDNA clone ZM... 53 5e-05
EU952415_1(EU952415|pid:none) Zea mays clone 1279986 hypothetica... 53 5e-05
AK117391_1(AK117391|pid:none) Arabidopsis thaliana At3g47990 mRN... 53 5e-05
BT037294_1(BT037294|pid:none) Zea mays full-length cDNA clone ZM... 53 5e-05
AY054498_1(AY054498|pid:none) Arabidopsis thaliana Unknown prote... 53 5e-05
AB095109_1(AB095109|pid:none) Ciona intestinalis CiGl mRNA, comp... 53 5e-05
AK109895_1(AK109895|pid:none) Oryza sativa Japonica Group cDNA c... 53 5e-05
DQ336954_11(DQ336954|pid:none) Glycine max cultivar Williams 82 ... 53 5e-05
AC105773_4(AC105773|pid:none) Oryza sativa (japonica cultivar-gr... 53 5e-05
BT071472_1(BT071472|pid:none) Picea sitchensis clone WS02915_D15... 53 5e-05
GM966277_1(GM966277|pid:none) Sequence 1609 from Patent WO200814... 53 5e-05
AC087599_19(AC087599|pid:none) Oryza sativa chromosome 10 BAC OS... 53 5e-05
BT065564_1(BT065564|pid:none) Zea mays full-length cDNA clone ZM... 53 5e-05
(Q93Z92) RecName: Full=E3 ubiquitin-protein ligase At4g11680; ... 53 5e-05
AK120070_1(AK120070|pid:none) Oryza sativa Japonica Group cDNA c... 53 5e-05
AM430844_5(AM430844|pid:none) Vitis vinifera contig VV78X248545.... 53 5e-05
EU959102_1(EU959102|pid:none) Zea mays clone 210425 protein bind... 53 5e-05
FN313965_1(FN313965|pid:none) Schistosoma japonicum isolate Anhu... 52 7e-05
CP001160_649(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 52 7e-05
EU973922_1(EU973922|pid:none) Zea mays clone 424283 protein bind... 52 7e-05
AK066069_1(AK066069|pid:none) Oryza sativa Japonica Group cDNA c... 52 7e-05
EU967215_1(EU967215|pid:none) Zea mays clone 300387 hypothetical... 52 7e-05
AP004818_8(AP004818|pid:none) Oryza sativa Japonica Group genomi... 52 7e-05
AM910995_417(AM910995|pid:none) Plasmodium knowlesi strain H chr... 52 7e-05
G84555(G84555)hypothetical protein At2g17730 [imported] - Arabid... 52 7e-05
EU959054_1(EU959054|pid:none) Zea mays clone 209794 RING-H2 fing... 52 7e-05
EU955413_1(EU955413|pid:none) Zea mays clone 1531547 unknown mRNA. 52 7e-05
AC139707_9(AC139707|pid:none) Medicago truncatula clone mth2-16b... 52 7e-05
>AC151824_8(AC151824|pid:none) Medicago truncatula clone mth2-45n18,
complete sequence. &AC157490_21(AC157490|pid:none)
Length = 315
Score = 112 bits (279), Expect = 7e-23
Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +3
Query: 960 NPNDYFQGGDWQGFLNRMFQASKKK-GTPPASKEEIEKLKRDRVDQTIVDQKVD-CAVCK 1133
N DYF G ++ + ++ + + GTPPASKE ++ L VD ++ +++ CAVC+
Sbjct: 139 NLGDYFLGAGFEQLIQQLAENDPNRYGTPPASKEAVKNLPTVTVDDALLSSELNQCAVCQ 198
Query: 1134 DEFKWGDDYIELPCQHLYHPECILPWLEQHNSCPVCRFELKTDDDSYE 1277
DEF+ G ++PC+H+YH +C+LPWLE HNSCPVCR EL TDD YE
Sbjct: 199 DEFEKGMQVKQMPCKHVYHDDCLLPWLELHNSCPVCRHELPTDDADYE 246
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,750,378,873
Number of extensions: 21991390
Number of successful extensions: 58939
Number of sequences better than 10.0: 1546
Number of HSP's gapped: 58562
Number of HSP's successfully gapped: 1592
Length of query: 721
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 585
Effective length of database: 611,008,840
Effective search space: 357440171400
Effective search space used: 357440171400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
1 |
| VF (FL, S) |
1 |
| AH (FL, L) |
2 |
| AF (FL, S) |
3 |
| SL (DIR, L) |
3 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
1 |
| SF (FL, S) |
1 |
| CH (FL, L) |
2 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |