Contig-U15517-1
Contig ID Contig-U15517-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Contig-U15517-1Q.Seq.d
AGATGATGAACAACCAATAAATTATAATAATAATAATAATTATACCAATA
TTAATCAAAATAATAAAAGATTTAAAAAAGATCATTTCCATACTCAATCT
CAATCACCATCACCATCCCAACAAAATACACCAAAAACATCTTATGCTTC
TTATTCATCACCATCAGTTTCAAGTATTATTTCTGATGACGTTCCATCCA
TTTCACCAATAAACTCTCCAAAAAGAGATTTGCATAATAGTGTTATTAAT
GGTAGTGCTCATTCTTCACCAGTTTTAAATTTTAATAGTGCTTATGATTT
TGAATCATCTTCATCATTGTCATCCTCTTCATTATTATCTTCCTCATCAT
CATCATCTCATTTCTTAAATCAAAACAACAACTGTAATAAAAAACAAATC
ACAACTACAACCACCACAACCACCACATCTACATCATCACCATCATCTGT
AAATAGTAATAATAGTTTTGTTCAATCAATTAATAGTTTAATTGATAATG
TTATGAAAAAAGATAATAATTCAAATATACTATCATCATTATCTTATTCA
AAGGGTAGTTTAATTAATAATAATAATAACAATAACAAAAATGTAAATAT
GAATAATAAACAGTAATAATAATAATAATAATAATAATAATAATAATAAT
AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAT
TAATAGCAGCAATAATAACAATATGTATAATATTTGTCCAGCTGNTGATN
ATCATAATATNCAATTTATAAAAGAACAATCANACTNTTCTTTATCATCA
TCACAACCAATTCCTCCATTTAATTTATATAATNAGCAACCCCAACAACA
AACTTATCAACAACCACCACCACAATCACAAGATAGTGGCAATAATCAAT
TCAATTTTAATAATAATAATAATAATAATAATAATAATAATAATAATAAT
AATAATAATGTTGAGTCTAATCAACAACAACAACAAATTCAACACCAAAC
ATCACCAATGTCAGTATTATCAAGATCAAATTCAAATATAAGTTTAAATT
CATTAAATTCATCAAGTTCATCAATATTATCAACACCATCAACACTTTCA
ACAACAACTACAACTACAACAACATCACATGCATCACATACATCACATAC
ATCAAATAGATCAAATGGAAGTAGAGGTAGAATACCATCAATACCACCAT
TTAATGGAAGATCATCAAATCATAATAATAATAATAATAGTAACAGTAAT
AATTATAATAATCATCAACAAACCAAAACTAATTCTGCCGAAGAACTAAT
ATTGGAAGAGTTAAAATCTTTGAATATTTATGATCAAGCTGCTTGTAATA
AAGATTTTCAAACCAATTTAAAAAGAGTTGAAGAACTTTTTAATCAAAAA
ATTAAACATGAACAAAAGTATCGACAATCATTGGAAGAGAAATTGGGTAA
AGCAAATCATCAAGTTTCTTTATTAACAAATCAAATTCAAAGTATCATTC
AAAAAGATGA----------AACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACCATTAGAAATTCAAGAACAATT
AACAATGTTACAATTACAACTTTCACAATTATCTCAACAACAACAAAACC
AAATCGATAAACAACAAAAACAAGAAAAATTACAACAAGAACAACAACAA
CAACAATTGAAAAATATTAATAGATTATCAATTTCATCAAATAGTTCAAC
ATTATCATCAAAAGATAGTTTTTATTTTGAATCAAAGATTCAAGAATTAT
CAAATCAATTAAAAGAGAAACAACAAGCTATTACCGATCGTGATAATAAA
ATTAAAGACTTTGAAAATCAATTAAATAAATATAAATTAATCGGATTGGA
TTCATTGGATCATTATCAGCTTTTAGAGTTGGAATCAAGTTTTCATAATG
GTTTAAAACAAATTGGTTCTATAAAAGATCAAAGATACCTCAATCGTTTG
GTTTCACTGGAAAAAGAGAAAGATCAATTAAAAGATCAAAATAGTTGTGT
CATTTGCGCTTCAAACCCTCCAAATATTGTATTACTACCATGTAGACATA
GTTCATTATGTTCAGATTGTTGTTCAAAATTAACAAAATGTCCAATTTGT
AGATNCCCATATTGAAA

Gap gap included
Contig length 2207
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 2261073
End point 2263038
Strand (PLUS/MINUS) PLUS
Number of clones 20
Number of EST 24
Link to clone list U15517
List of clone(s)

est1=SSL194F,1,599
est2=SSL493F,103,483
est3=VSA340Z,171,737
est4=SSL209Z,375,738
est5=SSG561E,381,1073
est6=VSD158F,429,742
est7=VSD158Z,429,613
est8=SSB883F,466,658
est9=VSD149F,591,694
est10=SHJ859Z,599,1047
est11=VSB448Z,600,1026
est12=SSJ260F,731,1221
est13=SLF608Z,817,1077
est14=AFK440F,873,1366
est15=SSL493Z,897,1117
est16=VSI132F,906,1150
est17=VSH489F,1019,1150
est18=AFA420F,1034,1510
est19=CHE212Z,1511,1753
est20=SLF331Z,1511,2015
est21=CHF787Z,1512,1709
est22=AFK440Z,1562,2196
est23=VSK438E,1615,2167
est24=AFA420Z,1745,2207
Translated Amino Acid sequence
mmnnq*iiiiiiiipilikiikdlkkiisilnlnhhhhpnkihqkhlmllihhhqfqvlf
lmtfhpfhq*tlqkeiciivllmvvlilhqf*ilivlmilnhlhhchplhyylphhhhli
s*iktttviknksqlqppqpphlhhhhhl*iviivlfnqliv*liml*kkiiiqiyyhhy
liqrvv*liiiititkm*i*IINSNNNNNNNNNNNNNNNNNNNNNNNNNNNNINSSNNNN
MYNICPAXDXHNXQFIKEQSXXSLSSSQPIPPFNLYNXQPQQQTYQQPPPQSQDSGNNQF
NFNNNNNNNNNNNNNNNNNVESNQQQQQIQHQTSPMSVLSRSNSNISLNSLNSSSSSILS
TPSTLSTTTTTTTTSHASHTSHTSNRSNGSRGRIPSIPPFNGRSSNHNNNNNSNSNNYNN
HQQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLKRVEELFNQKIKHEQKYRQSLEEK
LGKANHQVSLLTNQIQSIIQKD---

---QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPLEIQEQLTMLQLQLSQLSQQQ
QNQIDKQQKQEKLQQEQQQQQLKNINRLSISSNSSTLSSKDSFYFESKIQELSNQLKEKQ
QAITDRDNKIKDFENQLNKYKLIGLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLV
SLEKEKDQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRXPY*


Translated Amino Acid sequence (All Frames)
Frame A:
r**ttnkl*****lyqy*sk**ki*krsfpysisititiptkytknilcflfitisfkyy
f**rsihftnklskkrfa**cy*w*csfftsfkf**cl*f*iifiivilfiiifliiiis
flkskqql**ktnhnynhhnhhiyiitiick****fcsin**fn**cyekr**fkytiii
ilfkg*fn*****q*qkckye**tviiiiiiiiiiiiiiiiiiiiiiiiiiiiliaaiit
iciifvqlxxiiixnl*knnxtxlyhhhnqflhliyixsnpnnklinnhhhnhkivaiin
siliiiiiiiiiiiiiiiimlslinnnnkfntkhhqcqyyqdqiqi*v*ih*ihqvhqyy
qhhqhfqqqlqlqqhhmhhihhihqidqmeveveyhqyhhlmedhqiiiiiiivtviiii
iinkpklilpkn*ywks*nl*ifmikllvikifkpi*kelknflikklnmnksidnhwkr
nwvkqiikfly*qikfkvsfkkm---

---nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnh*kfknn*qcynynfhnylnn
nktksinnknkknynknnnnnn*kilidyqfhqivqhyhqkivfilnqrfknyqin*krn
nkllpiviiklktlkin*inin*sdwihwiiisf*swnqvfimv*nklvl*kikdtsivw
fhwkkrkin*kikivvsfalqtlqilyyyhvdivhyvqivvqn*qnvqfvdxhie

Frame B:
ddeqpinynnnnnytninqnnkrfkkdhfhtqsqspspsqqntpktsyasysspsvssii
sddvpsispinspkrdlhnsvingsahsspvlnfnsaydfesssslssssllsssssssh
flnqnnncnkkqitttttttttstsspssvnsnnsfvqsinslidnvmkkdnnsnilssl
syskgslinnnnnnnknvnmnnkq****************************y**qq**q
yv*ylssx*xs*yxiykrtixlffiiittnssi*fi*xatpttnlstttttitr*wq*si
qf*****************c*v*sttttnstpnitnvsiikikfkykfkfikfikfinii
ntintfnnnynynnitcityityik*ikwk*r*ntintti*wkiiks*******q**l**
sstnqn*fcrrtnigrvkifeyl*sscl**rfsnqfkks*rtf*skn*t*tkvstiigre
ig*sksssffinksnskyhskr*---

---ttttttttttttttttttttttttttttttttttttirnsrtinnvtittftiistt
tkpnr*ttktrkittrtttttieky**iinfik*fniiikr*flf*ikdsriiksikret
tsyyrs***n*rl*ksik*i*inrigfigslsafrvgikfs*wfktnwfykrskipqsfg
ftgkrersikrsk*lchlrfkpskycittm*t*fimfrllfkinkmsnl*xpilk

Frame C:
mmnnq*iiiiiiiipilikiikdlkkiisilnlnhhhhpnkihqkhlmllihhhqfqvlf
lmtfhpfhq*tlqkeiciivllmvvlilhqf*ilivlmilnhlhhchplhyylphhhhli
s*iktttviknksqlqppqpphlhhhhhl*iviivlfnqliv*liml*kkiiiqiyyhhy
liqrvv*liiiititkm*i*IINSNNNNNNNNNNNNNNNNNNNNNNNNNNNNINSSNNNN
MYNICPAXDXHNXQFIKEQSXXSLSSSQPIPPFNLYNXQPQQQTYQQPPPQSQDSGNNQF
NFNNNNNNNNNNNNNNNNNVESNQQQQQIQHQTSPMSVLSRSNSNISLNSLNSSSSSILS
TPSTLSTTTTTTTTSHASHTSHTSNRSNGSRGRIPSIPPFNGRSSNHNNNNNSNSNNYNN
HQQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLKRVEELFNQKIKHEQKYRQSLEEK
LGKANHQVSLLTNQIQSIIQKD---

---QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPLEIQEQLTMLQLQLSQLSQQQ
QNQIDKQQKQEKLQQEQQQQQLKNINRLSISSNSSTLSSKDSFYFESKIQELSNQLKEKQ
QAITDRDNKIKDFENQLNKYKLIGLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLV
SLEKEKDQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRXPY*

own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15517-1 (Contig-U15517-1Q)
/CSM_Contig/Contig-U15517-1Q.Seq.d
(2217 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Conti... 981 0.0
Contig-U16040-1 (Contig-U16040-1Q) /CSM_Contig/Conti... 48 6e-05
Contig-U12887-1 (Contig-U12887-1Q) /CSM_Contig/Conti... 48 6e-05
Contig-U11113-1 (Contig-U11113-1Q) /CSM_Contig/Conti... 48 6e-05
Contig-U10975-1 (Contig-U10975-1Q) /CSM_Contig/Conti... 48 6e-05
Contig-U15865-1 (Contig-U15865-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U15684-1 (Contig-U15684-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U14170-1 (Contig-U14170-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U14107-1 (Contig-U14107-1Q) /CSM_Contig/Conti... 46 2e-04
Contig-U12753-1 (Contig-U12753-1Q) /CSM_Contig/Conti... 46 2e-04

>Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Contig-U15517-1Q.Seq.d
Length = 2217

Score = 981 bits (495), Expect = 0.0
Identities = 495/495 (100%)
Strand = Plus / Plus


Query: 65 aaaagatttaaaaaagatcatttccatactcaatctcaatcaccatcaccatcccaacaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aaaagatttaaaaaagatcatttccatactcaatctcaatcaccatcaccatcccaacaa 124


Query: 125 aatacaccaaaaacatcttatgcttcttattcatcaccatcagtttcaagtattatttct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aatacaccaaaaacatcttatgcttcttattcatcaccatcagtttcaagtattatttct 184


Query: 185 gatgacgttccatccatttcaccaataaactctccaaaaagagatttgcataatagtgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatgacgttccatccatttcaccaataaactctccaaaaagagatttgcataatagtgtt 244


Query: 245 attaatggtagtgctcattcttcaccagttttaaattttaatagtgcttatgattttgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 attaatggtagtgctcattcttcaccagttttaaattttaatagtgcttatgattttgaa 304


Query: 305 tcatcttcatcattgtcatcctcttcattattatcttcctcatcatcatcatctcatttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcatcttcatcattgtcatcctcttcattattatcttcctcatcatcatcatctcatttc 364


Query: 365 ttaaatcaaaacaacaactgtaataaaaaacaaatcacaactacaaccaccacaaccacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttaaatcaaaacaacaactgtaataaaaaacaaatcacaactacaaccaccacaaccacc 424


Query: 425 acatctacatcatcaccatcatctgtaaatagtaataatagttttgttcaatcaattaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acatctacatcatcaccatcatctgtaaatagtaataatagttttgttcaatcaattaat 484


Query: 485 agtttaattgataatgttatgaaaaaagataataattcaaatatactatcatcattatct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agtttaattgataatgttatgaaaaaagataataattcaaatatactatcatcattatct 544


Query: 545 tattcaaagggtagt 559
|||||||||||||||
Sbjct: 545 tattcaaagggtagt 559


Score = 908 bits (458), Expect = 0.0
Identities = 461/461 (100%)
Strand = Plus / Plus


Query: 1757 ttgaaaaatattaatagattatcaatttcatcaaatagttcaacattatcatcaaaagat 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 ttgaaaaatattaatagattatcaatttcatcaaatagttcaacattatcatcaaaagat 1816


Query: 1817 agtttttattttgaatcaaagattcaagaattatcaaatcaattaaaagagaaacaacaa 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 agtttttattttgaatcaaagattcaagaattatcaaatcaattaaaagagaaacaacaa 1876


Query: 1877 gctattaccgatcgtgataataaaattaaagactttgaaaatcaattaaataaatataaa 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 gctattaccgatcgtgataataaaattaaagactttgaaaatcaattaaataaatataaa 1936


Query: 1937 ttaatcggattggattcattggatcattatcagcttttagagttggaatcaagttttcat 1996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 ttaatcggattggattcattggatcattatcagcttttagagttggaatcaagttttcat 1996


Query: 1997 aatggtttaaaacaaattggttctataaaagatcaaagatacctcaatcgtttggtttca 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 aatggtttaaaacaaattggttctataaaagatcaaagatacctcaatcgtttggtttca 2056


Query: 2057 ctggaaaaagagaaagatcaattaaaagatcaaaatagttgtgtcatttgcgcttcaaac 2116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 ctggaaaaagagaaagatcaattaaaagatcaaaatagttgtgtcatttgcgcttcaaac 2116


Query: 2117 cctccaaatattgtattactaccatgtagacatagttcattatgttcagattgttgttca 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 cctccaaatattgtattactaccatgtagacatagttcattatgttcagattgttgttca 2176


Query: 2177 aaattaacaaaatgtccaatttgtagatncccatattgaaa 2217
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 aaattaacaaaatgtccaatttgtagatncccatattgaaa 2217


Score = 492 bits (248), Expect = e-138
Identities = 248/248 (100%)
Strand = Plus / Plus


Query: 1263 catcaacaaaccaaaactaattctgccgaagaactaatattggaagagttaaaatctttg 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 catcaacaaaccaaaactaattctgccgaagaactaatattggaagagttaaaatctttg 1322


Query: 1323 aatatttatgatcaagctgcttgtaataaagattttcaaaccaatttaaaaagagttgaa 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 aatatttatgatcaagctgcttgtaataaagattttcaaaccaatttaaaaagagttgaa 1382


Query: 1383 gaactttttaatcaaaaaattaaacatgaacaaaagtatcgacaatcattggaagagaaa 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 gaactttttaatcaaaaaattaaacatgaacaaaagtatcgacaatcattggaagagaaa 1442


Query: 1443 ttgggtaaagcaaatcatcaagtttctttattaacaaatcaaattcaaagtatcattcaa 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 ttgggtaaagcaaatcatcaagtttctttattaacaaatcaaattcaaagtatcattcaa 1502


Query: 1503 aaagatga 1510
||||||||
Sbjct: 1503 aaagatga 1510


Score = 278 bits (140), Expect = 4e-74
Identities = 158/158 (100%)
Strand = Plus / Plus


Query: 733 tttgtccagctgntgatnatcataatatncaatttataaaagaacaatcanactnttctt 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tttgtccagctgntgatnatcataatatncaatttataaaagaacaatcanactnttctt 792


Query: 793 tatcatcatcacaaccaattcctccatttaatttatataatnagcaaccccaacaacaaa 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tatcatcatcacaaccaattcctccatttaatttatataatnagcaaccccaacaacaaa 852


Query: 853 cttatcaacaaccaccaccacaatcacaagatagtggc 890
||||||||||||||||||||||||||||||||||||||
Sbjct: 853 cttatcaacaaccaccaccacaatcacaagatagtggc 890


Score = 252 bits (127), Expect = 2e-66
Identities = 127/127 (100%)
Strand = Plus / Plus


Query: 960 gttgagtctaatcaacaacaacaacaaattcaacaccaaacatcaccaatgtcagtatta 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gttgagtctaatcaacaacaacaacaaattcaacaccaaacatcaccaatgtcagtatta 1019


Query: 1020 tcaagatcaaattcaaatataagtttaaattcattaaattcatcaagttcatcaatatta 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 tcaagatcaaattcaaatataagtttaaattcattaaattcatcaagttcatcaatatta 1079


Query: 1080 tcaacac 1086
|||||||
Sbjct: 1080 tcaacac 1086


Score = 147 bits (74), Expect = 9e-35
Identities = 74/74 (100%)
Strand = Plus / Plus


Query: 1148 tacatcaaatagatcaaatggaagtagaggtagaataccatcaataccaccatttaatgg 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 tacatcaaatagatcaaatggaagtagaggtagaataccatcaataccaccatttaatgg 1207


Query: 1208 aagatcatcaaatc 1221
||||||||||||||
Sbjct: 1208 aagatcatcaaatc 1221


Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 1629 cattagaaattcaagaacaattaacaatgtt 1659
|||||||||||||||||||||||||||||||
Sbjct: 1629 cattagaaattcaagaacaattaacaatgtt 1659


>Contig-U16040-1 (Contig-U16040-1Q) /CSM_Contig/Contig-U16040-1Q.Seq.d
Length = 1059

Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 972 caacaacaacaacaaattcaacaccaaa 999
||||||||||||||||||||||| ||||
Sbjct: 269 caacaacaacaacaaattcaacaacaaa 296


Score = 34.2 bits (17), Expect = 0.89
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 978 caacaacaaattcaaca 994
|||||||||||||||||
Sbjct: 287 caacaacaaattcaaca 303


Score = 32.2 bits (16), Expect = 3.5
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 971 tcaacaacaacaacaa 986
||||||||||||||||
Sbjct: 298 tcaacaacaacaacaa 313


>Contig-U12887-1 (Contig-U12887-1Q) /CSM_Contig/Contig-U12887-1Q.Seq.d
Length = 764

Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Plus


Query: 404 actacaaccaccacaaccaccacatctacatcatcaccatcatc 447
||||| |||||||| ||||||||||||||| || || |||||||
Sbjct: 375 actaccaccaccaccaccaccacatctacaacaacatcatcatc 418


Score = 36.2 bits (18), Expect = 0.22
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 1797 caacattatcatcaaaagatag 1818
|||||| |||||||||||||||
Sbjct: 406 caacatcatcatcaaaagatag 427


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 73,712
Number of Sequences: 8402
Number of extensions: 73712
Number of successful extensions: 18790
Number of sequences better than 10.0: 1100
length of query: 2217
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2200
effective length of database: 7,932,708
effective search space: 17451957600
effective search space used: 17451957600
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1.30
Homology vs DNA
Query= Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Contig-U15517-1Q.Seq.d
(2217 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ342675) Dictyostelium discoideum cDNA clone:dda1h06, 3' e... 496 0.0 3
(AU271196) Dictyostelium discoideum vegetative cDNA clone:VS... 444 0.0 3
(BJ345061) Dictyostelium discoideum cDNA clone:dda21p10, 3' ... 410 0.0 5
(AU271197) Dictyostelium discoideum vegetative cDNA clone:VS... 442 e-180 3
(BJ325707) Dictyostelium discoideum cDNA clone:dda1h06, 5' e... 492 e-165 2
(AU261435) Dictyostelium discoideum vegetative cDNA clone:VS... 264 e-136 2
(BJ327711) Dictyostelium discoideum cDNA clone:dda21p10, 5' ... 196 e-121 3
(AU074520) Dictyostelium discoideum slug cDNA, clone SSL194. 319 2e-83 2
(AU263570) Dictyostelium discoideum vegetative cDNA clone:VS... 250 2e-61 1
(AU263571) Dictyostelium discoideum vegetative cDNA clone:VS... 248 8e-61 1
(BJ407763) Dictyostelium discoideum cDNA clone:dds43f16, 3' ... 220 2e-52 1
(AU071607) Dictyostelium discoideum slug cDNA, clone SSB883. 188 6e-43 1
(AU053063) Dictyostelium discoideum slug cDNA, clone SLF608. 96 7e-15 1
(C89873) Dictyostelium discoideum slug cDNA, clone SSG561. 96 7e-15 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 42 2e-05 10
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 3e-05 11
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 42 2e-04 8
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 5e-04 7
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 38 0.002 9
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 0.004 12
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 40 0.004 7
(AY160100) Dictyostelium discoideum nucleotide exchange fact... 38 0.006 6
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 40 0.007 9
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 34 0.007 10
(AY232269) Dictyostelium discoideum putative protein Roco7 (... 42 0.007 6
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 36 0.009 10
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 36 0.012 10
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 0.014 13
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 46 0.016 5
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 54 0.023 1
(DE214811) Trifolium pratense DNA, clone:RCG03375. 32 0.023 4
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 38 0.024 11
(AC118819) Rattus norvegicus clone CH230-447C24, WORKING DRA... 44 0.024 6
(FM078339) Rattus norvegicus EST, 5'-end sequence, clone etn... 46 0.037 2
(BJ381729) Dictyostelium discoideum cDNA clone:ddc42p08, 3' ... 38 0.052 4
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 40 0.062 14
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.064 14
(EY367588) CAXA11338.fwd CAXA Helobdella robusta Subtracted ... 52 0.092 1
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 42 0.094 14
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 38 0.11 7
(AR549429) Sequence 4560 from patent US 6747137. 46 0.12 2
(U67716) Dictyostelium discoideum myosin I heavy chain kinas... 34 0.14 5
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.16 11
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.16 13
(Y10158) D.discoideum mRNA for STE20/pak kinase homologue. 34 0.16 5
(AY232271) Dictyostelium discoideum putative protein Roco9 (... 42 0.18 4
(EY331562) CAWY4258.fwd CAWY Helobdella robusta Subtracted E... 44 0.18 2
(AF362373) Dictyostelium discoideum histidine kinase DhkL (d... 34 0.18 5
(DL131077) Bax-responsive genes for drug target identificati... 46 0.19 2
(AX536864) Sequence 465 from Patent WO02064766. 46 0.19 2
(AR941637) Sequence 465 from patent US 7101990. 46 0.19 2
(AF474377) Dictyostelium discoideum Ras GTP exchange factor ... 38 0.19 4
(BJ386300) Dictyostelium discoideum cDNA clone:ddc57c23, 3' ... 38 0.20 3
(EY337093) CAWY8102.fwd CAWY Helobdella robusta Subtracted E... 44 0.21 2
(DU672233) Bst004775 lambda03 Boechera stricta genomic clone... 46 0.22 2
(AP007985) Lotus japonicus genomic DNA, chromosome 4, clone:... 38 0.27 7
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 36 0.27 11
(EC372361) G840P33FB2.T0 Oscarella carmela pSport1 Library I... 36 0.27 2
(AF102575) Dictyostelium discoideum cell surface protein DTF... 34 0.36 5
(CU972496) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.36 6
(BV693764) CqfSI_AAC48 Cronartium nuclear microsatellite seq... 50 0.36 1
(BB971286) Plasmodium berghei str. ANKA cDNA clone: OK000950... 50 0.36 1
(FG067339) dlbw0_004683 cDNA library of cambium of Betula pl... 50 0.36 1
(BJ331518) Dictyostelium discoideum cDNA clone:dda35p17, 5' ... 34 0.47 3
(BJ423497) Dictyostelium discoideum cDNA clone:ddv49l09, 5' ... 34 0.47 3
(BJ391097) Dictyostelium discoideum cDNA clone:dds15f03, 5' ... 42 0.50 2
(AC117082) Dictyostelium discoideum chromosome 2 map complem... 40 0.50 6
(BJ348298) Dictyostelium discoideum cDNA clone:dda32e21, 3' ... 40 0.50 2
(BJ354923) Dictyostelium discoideum cDNA clone:dda55m06, 3' ... 40 0.51 3
(BJ345473) Dictyostelium discoideum cDNA clone:dda23e24, 3' ... 40 0.52 2
(BJ356777) Dictyostelium discoideum cDNA clone:dda61l08, 3' ... 40 0.53 2
(BJ381684) Dictyostelium discoideum cDNA clone:ddc42g11, 3' ... 40 0.53 2
(AC169501) Mus musculus BAC clone RP24-445O18 from chromosom... 40 0.55 5
(AU060258) Dictyostelium discoideum slug cDNA, clone SLA749. 42 0.55 2
(BJ361243) Dictyostelium discoideum cDNA clone:ddc16k11, 5' ... 42 0.58 2
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 32 0.59 12
(BJ336454) Dictyostelium discoideum cDNA clone:dda53p22, 5' ... 38 0.61 2
(BJ441374) Dictyostelium discoideum cDNA clone:ddv46c16, 3' ... 40 0.64 2
(BJ380974) Dictyostelium discoideum cDNA clone:ddc39n20, 3' ... 40 0.65 2
(BJ405229) Dictyostelium discoideum cDNA clone:dds31b04, 3' ... 30 0.70 4
(AY484461) Dictyostelium discoideum kinesin family member 6 ... 38 0.75 4
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 38 0.75 9
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 38 0.87 9
(DY891081) CeleSEQ7613 Cunninghamella elegans pBluescript (E... 36 0.92 3
(BJ374167) Dictyostelium discoideum cDNA clone:ddc6g21, 3' e... 38 0.96 3
(CR962134) Medicago truncatula chromosome 5 clone mte1-40n1,... 40 0.99 10
(BJ342098) Dictyostelium discoideum cDNA clone:dda9c13, 3' e... 38 1.0 3
(DY890091) CeleSEQ7142 Cunninghamella elegans pBluescript (E... 34 1.0 2
(Z98551) Plasmodium falciparum MAL3P6. 32 1.0 10
(AX647437) Sequence 1629 from Patent EP1270724. 32 1.1 4
(BQ357278) RC6-HT0678-290600-013-G06 HT0678 Homo sapiens cDN... 38 1.1 2
(FP015760) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.2 5
(BJ382053) Dictyostelium discoideum cDNA clone:ddc43b20, 3' ... 38 1.2 3
(AC116919) Dictyostelium discoideum chromosome 2 map complem... 40 1.2 7
(AZ145580) SP_0021_B1_G11_T7 Strongylocentrotus purpuratus, ... 32 1.2 4
(AU061709) Dictyostelium discoideum slug cDNA, clone SLF512. 46 1.3 2
(BJ390860) Dictyostelium discoideum cDNA clone:dds14b03, 5' ... 46 1.3 2
(AC068457) Homo sapiens chromosome 11, clone RP11-582N4, com... 40 1.3 3
(BJ328605) Dictyostelium discoideum cDNA clone:dda28f22, 5' ... 46 1.3 2
(BF833522) CM4-HT0920-281000-387-d02 HT0920 Homo sapiens cDN... 38 1.4 2
(AB030033) Dictyostelium discoideum gene for AmiB, complete ... 34 1.4 4
(BJ381660) Dictyostelium discoideum cDNA clone:ddc42b12, 3' ... 36 1.4 3
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 38 1.4 10
(AF090533) Dictyostelium discoideum unconventional myosin he... 34 1.4 5
(AY128834) Arabidopsis thaliana putative fizzy-related prote... 48 1.4 1
(AY099585) Arabidopsis thaliana putative fizzy-related prote... 48 1.4 1
(AL161558) Arabidopsis thaliana DNA chromosome 4, contig fra... 48 1.4 1
(AL031018) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 48 1.4 1
(FB583011) Sequence 801 from Patent WO2006081029. 48 1.4 1
(CQ891359) Sequence 1 from Patent WO2004087929. 48 1.4 1
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 48 1.4 1
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 48 1.4 1
(AQ742476) HS_5383_B1_C12_T7A RPCI-11 Human Male BAC Library... 48 1.4 1
(FH668078) CHO_OF5021xj05f1.ab1 CHO_OF5 Nicotiana tabacum ge... 48 1.4 1
(ET822702) CHO_OF764xg09r1.ab1 CHO_OF Nicotiana tabacum geno... 48 1.4 1
(EK051097) 1092959702691 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EK009168) 1092955144766 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(EJ645881) 1091120967792 Global-Ocean-Sampling_GS-30-01-01-1... 48 1.4 1
(EJ645598) 1091120724528 Global-Ocean-Sampling_GS-30-01-01-1... 48 1.4 1
(DE952261) Macropus eugenii DNA, BAC clone: MEB1-150L06_R, 3... 48 1.4 1
(DB630340) Halocynthia roretzi cDNA clone:man32g14, 5' end. 48 1.4 1
(CD577778) 21_H01_21_013 ESTs from wild-caught Anopheles fun... 48 1.4 1
(CD577777) 47(2)w-3_03_C09_067 ESTs from wild-caught Anophel... 48 1.4 1
(CB264487) 57-E015023-035-004-B15-T7R MPIZ-ADIS-035 Arabidop... 48 1.4 1
(BX837553) Arabidopsis thaliana Full-length cDNA 5PRIM end o... 48 1.4 1
(BJ388332) Dictyostelium discoideum cDNA clone:dds9c05, 5' e... 48 1.4 1
(BJ329058) Dictyostelium discoideum cDNA clone:dda30i15, 5' ... 48 1.4 1
(EY295753) CAWX12425.rev CAWX Helobdella robusta Primary Ear... 48 1.4 1
(AV830129) Arabidopsis thaliana cDNA clone:RAFL09-63-A14, 5'... 48 1.4 1
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI... 38 1.5 7
(C91436) Dictyostelium discoideum slug cDNA, clone SSK247. 38 1.5 3
(BJ352566) Dictyostelium discoideum cDNA clone:dda47m04, 3' ... 38 1.6 3
(BJ363151) Dictyostelium discoideum cDNA clone:ddc25h11, 5' ... 42 1.6 2
(FE232126) CAPG1586.fwd CAPG Naegleria gruberi amoeba stage ... 32 1.6 4
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 36 1.6 9
(BJ360144) Dictyostelium discoideum cDNA clone:ddc4g13, 5' e... 42 1.7 2
(BJ361382) Dictyostelium discoideum cDNA clone:ddc16o23, 5' ... 46 1.7 2
(BJ388696) Dictyostelium discoideum cDNA clone:dds6f23, 5' e... 42 1.8 2
(BJ363974) Dictyostelium discoideum cDNA clone:ddc29i11, 5' ... 46 1.8 2
(BJ353659) Dictyostelium discoideum cDNA clone:dda51c03, 3' ... 38 1.8 3
(BJ323960) Dictyostelium discoideum cDNA clone:dda4h01, 5' e... 42 1.8 2
(U23477) Dictyostelium discoideum phosphatidylinositol-4,5-d... 42 1.9 3
(BJ324054) Dictyostelium discoideum cDNA clone:dda4d15, 5' e... 42 1.9 2
(BJ326243) Dictyostelium discoideum cDNA clone:dda15o20, 5' ... 42 1.9 2
(BJ347885) Dictyostelium discoideum cDNA clone:dda31b15, 3' ... 38 1.9 3
(BJ324118) Dictyostelium discoideum cDNA clone:dda4j24, 5' e... 42 1.9 2
(BJ347860) Dictyostelium discoideum cDNA clone:dda31m07, 3' ... 38 1.9 3
(BJ325695) Dictyostelium discoideum cDNA clone:dda1d03, 5' e... 42 1.9 2
(BJ386802) Dictyostelium discoideum cDNA clone:dds10c19, 5' ... 42 2.0 2
(BJ420622) Dictyostelium discoideum cDNA clone:ddv39k24, 5' ... 42 2.0 2
(BJ337776) Dictyostelium discoideum cDNA clone:dda58n15, 5' ... 42 2.0 2
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 34 2.0 12
(X89263) C.albicans DNA for MNT2 gene. 40 2.0 3
(BJ418952) Dictyostelium discoideum cDNA clone:ddv34g16, 5' ... 42 2.0 2
(AJ969073) Spiroplasma citri pSci5 plasmid. 34 2.0 4
(BJ323890) Dictyostelium discoideum cDNA clone:dda12b19, 5' ... 46 2.0 2
(BJ352994) Dictyostelium discoideum cDNA clone:dda48j17, 3' ... 40 2.0 2
(BJ337289) Dictyostelium discoideum cDNA clone:dda56l24, 5' ... 46 2.0 2
(BJ325460) Dictyostelium discoideum cDNA clone:dda14j15, 5' ... 42 2.0 2
(BJ360477) Dictyostelium discoideum cDNA clone:ddc6e10, 5' e... 46 2.1 2
(BJ327264) Dictyostelium discoideum cDNA clone:dda19f21, 5' ... 42 2.1 2
(BJ326452) Dictyostelium discoideum cDNA clone:dda16e13, 5' ... 42 2.1 2
(BJ388243) Dictyostelium discoideum cDNA clone:dds8i17, 5' e... 42 2.1 2
(BJ350659) Dictyostelium discoideum cDNA clone:dda40i17, 3' ... 38 2.1 3
(BJ389575) Dictyostelium discoideum cDNA clone:dds19c11, 5' ... 42 2.1 2
(BJ412400) Dictyostelium discoideum cDNA clone:ddv8e12, 5' e... 42 2.1 2
(EI720267) 2B421014M12TF BAC library from breast tumor sampl... 32 2.2 3
(BJ325958) Dictyostelium discoideum cDNA clone:dda3m02, 5' e... 42 2.2 2
(AU060701) Dictyostelium discoideum slug cDNA, clone SLB164. 46 2.3 2
(BJ355045) Dictyostelium discoideum cDNA clone:dda55g15, 3' ... 36 2.3 3
(AU060932) Dictyostelium discoideum slug cDNA, clone SLC289. 42 2.3 2
(EH011282) USDA-FP_184297 Lysiphlebus testaceipes adult whol... 36 2.3 2
(BJ380668) Dictyostelium discoideum cDNA clone:ddc38m20, 3' ... 38 2.3 3
(FB571381) Sequence 248 from Patent EP1865317. 32 2.4 10
(AB017910) Dictyostelium discoideum myoM gene, complete cds. 34 2.4 5
(AF045453) Dictyostelium discoideum protein kinase YakA (yak... 34 2.4 4
(CN807694) HDAH01E09.F Leech Haementeria depressa library HD... 40 2.4 2
(BJ352114) Dictyostelium discoideum cDNA clone:dda45n13, 3' ... 38 2.4 3
(FE261861) CAZO2260.fwd CAZO Naegleria gruberi Flagellate St... 34 2.5 3
(BJ354590) Dictyostelium discoideum cDNA clone:dda54j04, 3' ... 38 2.5 3
(AC180768) Strongylocentrotus purpuratus clone R3-3022O11, W... 36 2.5 9
(EH011939) USDA-FP_184888 Lysiphlebus testaceipes adult whol... 36 2.5 2
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 44 2.6 6
(BJ444802) Dictyostelium discoideum cDNA clone:ddv57b15, 3' ... 34 2.6 4
(DY891073) CeleSEQ7600 Cunninghamella elegans pBluescript (E... 34 2.7 3
(AC190077) Aotus nancymaae clone CH258-356L6, WORKING DRAFT ... 34 2.8 2
(AC150020) Papio anubis clone RP41-380L14, WORKING DRAFT SEQ... 34 2.8 2
(BS000080) Pan troglodytes chromosome 22 clone:PTB-090L14, m... 36 2.8 2
(EJ031306) 1095454047883 Global-Ocean-Sampling_GS-26-01-01-1... 36 2.8 3
(AC171339) Macaca mulatta clone CH250-370E11, WORKING DRAFT ... 34 2.8 2
(AC149866) Papio anubis clone RP41-475C15, WORKING DRAFT SEQ... 34 2.8 2
(AF093689) Dictyostelium discoideum MEK kinase alpha (mkkA) ... 34 2.9 4
(ES394264) MUS08-P22.x1d-t SHGC-MUS Mytilus californianus cD... 38 2.9 2
(AM650249) Entamoeba moshkovskii FIC GSS, clone mosh074a01.p1k. 36 2.9 3
(AJ412894) Homo sapiens partial STAT5B gene for signal trans... 38 3.0 2
(EJ034001) 1095454063576 Global-Ocean-Sampling_GS-26-01-01-1... 42 3.0 2
(DY886238) CeleSEQ1808 Cunninghamella elegans pBluescript (E... 38 3.1 2
(AU074254) Dictyostelium discoideum slug cDNA, clone SSK153. 42 3.1 2
(AL440262) T7 end of clone BD0AA011B06 of library BD0AA from... 40 3.3 3
(BM884033) rc18f01.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 38 3.6 3
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 40 3.6 15
(AB265412) Comibaena amoenaria gene for 16S rRNA, partial se... 38 3.6 3
(AC095499) Rattus norvegicus clone CH230-7P10, WORKING DRAFT... 42 3.8 10
(AU037918) Dictyostelium discoideum slug cDNA, clone SSE453. 34 3.8 2
(AU053608) Dictyostelium discoideum slug cDNA, clone SLJ223. 34 3.9 2
(AZ925268) 4910.ez32n10.s1 Saccharomyces paradoxus N17 Sacch... 32 3.9 2
(AF057019) Dictyostelium discoideum interaptin (abpD) gene, ... 36 3.9 4
(BM883881) rc23h07.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 38 4.3 3
(BM883901) rc24b03.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 38 4.4 3
(BH272219) CH230-21L22.TV CHORI-230 Segment 1 Rattus norvegi... 36 4.6 2
(AR554574) Sequence 9705 from patent US 6747137. 40 4.9 2
(DL131179) Bax-responsive genes for drug target identificati... 38 4.9 4
(AX537068) Sequence 669 from Patent WO02064766. 38 4.9 4
(AR941739) Sequence 669 from patent US 7101990. 38 4.9 4
(CR013347) Forward strand read from insert in 5'HPRT inserti... 32 4.9 4
(BZ229998) CH230-353C24.TV CHORI-230 Segment 2 Rattus norveg... 32 5.1 3
(AJ010592) Guillardia theta DNA for complete sequence of nuc... 36 5.2 10
(BJ326589) Dictyostelium discoideum cDNA clone:dda17i04, 5' ... 32 5.3 3
(AY753021) Penaeus monodon clone t2107 microsatellite sequence. 34 5.4 3
(BJ345710) Dictyostelium discoideum cDNA clone:dda28g14, 3' ... 40 5.4 2
(BX901893) Zebrafish DNA sequence from clone CH211-72G23 in ... 46 5.7 1
(AL805920) Mouse DNA sequence from clone RP23-162M7 on chrom... 46 5.7 1
(AC154690) Mus musculus BAC clone RP24-331B7 from chromosome... 46 5.7 1
(AC154305) Mus musculus BAC clone RP24-492C11 from chromosom... 46 5.7 1
(BT014011) Lycopersicon esculentum clone 133072F, mRNA seque... 46 5.7 1
(AY448010) Ipomoea trifida haplotype S1 self-incompatibility... 46 5.7 1
(AY351702) Ipomoea trifida glycosyltransferase 10 mRNA, comp... 46 5.7 1
(AY351700) Ipomoea trifida glycosyltransferase 1 mRNA, compl... 46 5.7 1
(AP008216) Oryza sativa (japonica cultivar-group) genomic DN... 46 5.7 1
(AM452889) Vitis vinifera contig VV78X021186.3, whole genome... 46 5.7 1
(AK106877) Oryza sativa Japonica Group cDNA clone:002-118-E0... 46 5.7 1
(AC105377) Oryza sativa chromosome 10 BAC OSJNBa0034E15 geno... 46 5.7 1
(AB263749) Ipomoea trifida DNA, self-incompatibility (S-) lo... 46 5.7 1
(AB263748) Ipomoea trifida DNA, self-incompatibility (S-) lo... 46 5.7 1
(EA701988) Sequence 80867 from patent US 7365185. 46 5.7 1
(DD209227) test. 46 5.7 1
(CS374553) Sequence 656 from Patent WO2006034879. 46 5.7 1
(AX826064) Sequence 316 from Patent WO03072821. 46 5.7 1
(AX822424) Sequence 316 from Patent EP1340818. 46 5.7 1
(AX250461) Sequence 67 from Patent WO0168863. 46 5.7 1
(AY263399) Dictyostelium discoideum strain Ax2 sombrero SmbA... 46 5.7 1
(AF388659) Apis mellifera 1D-myo-inositol-trisphosphate 3-ki... 46 5.7 1
(AF362376) Dictyostelium discoideum histidine kinase DhkK (d... 46 5.7 1
(AF088979) Dictyostelium discoideum beige protein homolog (l... 46 5.7 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 5.7 1
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 46 5.7 1
(AL589842) Human DNA sequence from clone RP11-268A15 on chro... 46 5.7 1
(AC128804) Rattus norvegicus clone CH230-144F16, *** SEQUENC... 46 5.7 1
(FP015885) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.7 1
(AC092742) Mus musculus strain C57BL6/J clone RP23-158O21, W... 46 5.7 1
(CU487214) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.7 1
(CU463139) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.7 1
(BX000982) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 46 5.7 1
(AC226438) Zea mays chromosome UNKNOWN clone CH201-484P16; Z... 46 5.7 1
(AC223465) Bos taurus clone CH240-469A15, WORKING DRAFT SEQU... 46 5.7 1
(AC186209) Canis familiaris chromosome 12 clone XX-260N1 map... 46 5.7 1
(AC164959) Bos taurus clone CH240-163E23, WORKING DRAFT SEQU... 46 5.7 1
(EI270550) OR__Ba0080E17.f OR__Ba Oryza rufipogon genomic cl... 46 5.7 1
(CL860316) OR_CBa0091O03.f OR_CBa Oryza rufipogon genomic cl... 46 5.7 1
(CL852456) OR_CBa0081F09.r OR_CBa Oryza rufipogon genomic cl... 46 5.7 1
(CL755712) OR_BBa0123I20.r OR_BBa Oryza nivara genomic clone... 46 5.7 1
(CL752532) OR_BBa0119F06.f OR_BBa Oryza nivara genomic clone... 46 5.7 1
(CL749600) OR_BBa0115G22.f OR_BBa Oryza nivara genomic clone... 46 5.7 1
(CL617957) OR_BBa0011D04.r OR_BBa Oryza nivara genomic clone... 46 5.7 1
(CL529232) HIV64C10.fwd HIV-vector integration sites in huma... 46 5.7 1
(AG365872) Mus musculus molossinus DNA, clone:MSMg01-168M20.... 46 5.7 1
(ES221666) MpGV_ag4_E17 Myzus persicae, line G006, PLRV infe... 46 5.7 1
(EL539308) EST_omor_rgc_3261 omorrgc mixed_tissue Osmerus mo... 46 5.7 1
(DY893227) CeleSEQ12504 Cunninghamella elegans pBluescript (... 46 5.7 1
(DV159573) KP1B.037M22F.050623T7 KP1B Nicotiana tabacum cDNA... 46 5.7 1
(DT746898) EST1180747 Aquilegia cDNA library Aquilegia formo... 46 5.7 1
(DB693312) Solanum lycopersicum cDNA, clone: LEFL1048AB02, 5... 46 5.7 1
(DB680359) Solanum lycopersicum cDNA, clone: LEFL1007AD11, 5... 46 5.7 1
(CI455062) Oryza sativa Japonica Group cDNA, clone: J07B5031... 46 5.7 1
(CI428149) Oryza sativa Japonica Group cDNA, clone: J06B5126... 46 5.7 1
(CI097693) Oryza sativa Japonica Group cDNA, clone: 019-M080... 46 5.7 1
(CF542859) S014678w-024-030-O16-SP6 MPIZ-ADIS-024-leaf Beta ... 46 5.7 1
(C90192) Dictyostelium discoideum slug cDNA, clone SSI233. 46 5.7 1
(C84181) Dictyostelium discoideum slug cDNA, clone SSC448. 46 5.7 1
(AI773070) EST254170 tomato resistant, Cornell Solanum lycop... 46 5.7 1
(BQ588023) E012338-024-009-H05-SP6 MPIZ-ADIS-024-leaf Beta v... 46 5.7 1
(AF053559) AF053559 Common ice plant root, 6 hour salt stres... 46 5.7 1
(BP130616) Nicotiana tabacum cDNA, clone: BY2605, primer: M1... 46 5.7 1
(BJ395848) Dictyostelium discoideum cDNA clone:dds40l11, 5' ... 46 5.7 1
(BJ392814) Dictyostelium discoideum cDNA clone:dds29e02, 5' ... 46 5.7 1
(BJ386235) Dictyostelium discoideum cDNA clone:ddc57f18, 3' ... 46 5.7 1
(BJ371333) Dictyostelium discoideum cDNA clone:ddc57f18, 5' ... 46 5.7 1
(BJ336344) Dictyostelium discoideum cDNA clone:dda53g15, 5' ... 46 5.7 1
(BJ336118) Dictyostelium discoideum cDNA clone:dda52f20, 5' ... 46 5.7 1
(BI932800) EST552689 tomato flower, 8 mm to preanthesis buds... 46 5.7 1
(BI506154) BB170019B20E05.5 Bee Brain Normalized/Subtracted ... 46 5.7 1
(EY345978) CAWZ14405.fwd CAWZ Helobdella robusta Primary Lat... 46 5.7 1
(EY330973) CAWY3857.fwd CAWY Helobdella robusta Subtracted E... 46 5.7 1
(CP001080) Sulfurihydrogenibium sp. YO3AOP1, complete genome. 46 5.7 1
(CP000806) Cyanothece sp. ATCC 51142 circular chromosome, co... 46 5.7 1
(BJ362163) Dictyostelium discoideum cDNA clone:ddc20f15, 5' ... 36 5.9 2
(AC019287) Homo sapiens chromosome 15 clone RP11-51A16 map 1... 40 5.9 4
(BH148119) ENTPV80TF Entamoeba histolytica Sheared DNA Entam... 32 5.9 4
(GE593620) CCPW2284.b1_H20.ab1 CCP(UWX) Globe Artichoke Cyna... 38 6.0 3
(AZ211711) SP_0157_B2_C02_T7A Strongylocentrotus purpuratus,... 32 6.0 4
(BJ422357) Dictyostelium discoideum cDNA clone:ddv45l18, 5' ... 34 6.1 3
(BJ364442) Dictyostelium discoideum cDNA clone:ddc31a20, 5' ... 34 6.1 3
(BJ330057) Dictyostelium discoideum cDNA clone:dda27a12, 5' ... 44 6.2 2
(FM140961) Rattus norvegicus EST, 5'-end sequence, clone etn... 32 6.2 3
(AU284657) Dictyostelium discoideum gamete cDNA clone:FC-BG0... 36 6.4 3
(EI724921) 2B421021J02TF BAC library from breast tumor sampl... 34 6.4 3
(CR239282) Forward strand read from insert in 5'HPRT inserti... 32 6.4 4
(EH012673) USDA-FP_185550 Lysiphlebus testaceipes adult whol... 32 6.4 3
(U66525) Dictyostelium discoideum ORFveg114 mRNA, complete cds. 36 6.4 4
(BJ325871) Dictyostelium discoideum cDNA clone:dda2p18, 5' e... 34 6.5 3
(EL929082) EST0706 ARS-CICGRU ONmgEST Ostrinia nubilalis cDN... 44 6.7 2
(EL929778) EST1407 ARS-CICGRU ONmgEST Ostrinia nubilalis cDN... 44 6.7 2
(BJ367441) Dictyostelium discoideum cDNA clone:ddc42b21, 5' ... 38 6.9 2
(EB560567) AGENCOURT_51360609 D. virilis EST Drosophila viri... 38 7.0 2
(DH481089) Monosiga ovata DNA, fosmid clone: MOF-034G08, gen... 36 7.2 2
(BJ417991) Dictyostelium discoideum cDNA clone:ddv31d10, 5' ... 36 7.2 2
(EL929665) EST1292 ARS-CICGRU ONmgEST Ostrinia nubilalis cDN... 44 7.4 2
(BJ401382) Dictyostelium discoideum cDNA clone:dds23g01, 3' ... 30 7.4 3
(BJ437525) Dictyostelium discoideum cDNA clone:ddv34e14, 3' ... 36 7.5 3
(EH016250) USDA-FP_188770 Lysiphlebus testaceipes adult whol... 40 7.5 2
(BX323879) Zebrafish DNA sequence from clone DKEY-30L21 in l... 42 7.7 8
(AC174347) Medicago truncatula chromosome 8 clone mth2-173b1... 34 7.7 7
(FE231999) CAPG1518.rev CAPG Naegleria gruberi amoeba stage ... 40 7.8 2
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 7.9 13
(BJ415213) Dictyostelium discoideum cDNA clone:ddv21g21, 5' ... 36 7.9 2
(EX163707) LY_YIT_DP1830 Dermatophagoides pteronyssinus cDNA... 38 8.0 2
(FE236533) CAPG3936.rev CAPG Naegleria gruberi amoeba stage ... 40 8.0 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 8.0 10
(BI266006) NF097H12IN1F1104 Insect herbivory Medicago trunca... 36 8.1 2
(FH318385) CHO_OF4493xc07f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 8.1 3
(FE267064) CAZO5886.rev CAZO Naegleria gruberi Flagellate St... 40 8.3 2
(FE245106) CAPG8621.rev CAPG Naegleria gruberi amoeba stage ... 40 8.4 2
(EB569389) AGENCOURT_51782348 D. virilis EST Drosophila viri... 38 8.4 2
(DX933686) MUGQ_CH252P088F02Sp6_CP106_011 CHORI-252 Vervet M... 30 8.6 4
(AF361947) Dictyostelium discoideum SgcA (sgcA) mRNA, comple... 34 8.6 6
(DB997969) Quercus mongolica subsp. crispula mRNA, clone: Qm... 42 8.7 2
(BX176560) Danio rerio genomic clone DKEY-179K7, genomic sur... 38 8.8 2
(BJ344646) Dictyostelium discoideum cDNA clone:dda20c05, 3' ... 30 8.8 4
(U38197) Dictyostelium discoideum protein tyrosine phosphata... 38 8.8 2
(EB574093) AGENCOURT_51107697 D. virilis EST Drosophila viri... 38 9.0 2
(EB573904) AGENCOURT_51103962 D. virilis EST Drosophila viri... 38 9.0 2
(EB566128) AGENCOURT_51103866 D. virilis EST Drosophila viri... 38 9.0 2
(EB564950) AGENCOURT_51118374 D. virilis EST Drosophila viri... 38 9.0 2
(EJ784620) 1093017304439 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.0 2
(BJ445487) Dictyostelium discoideum cDNA clone:ddv59i15, 3' ... 36 9.1 2
(ET759119) CHO_OF294xd21f1.ab1 CHO_OF Nicotiana tabacum geno... 36 9.2 3
(EB573622) AGENCOURT_51779016 D. virilis EST Drosophila viri... 38 9.2 2
(EY382102) CAXA3860.fwd CAXA Helobdella robusta Subtracted L... 34 9.2 3
(EB570098) AGENCOURT_51878378 D. virilis EST Drosophila viri... 38 9.2 2
(EB559105) AGENCOURT_51360293 D. virilis EST Drosophila viri... 38 9.3 2
(EB561819) AGENCOURT_51117010 D. virilis EST Drosophila viri... 38 9.3 2
(EB563563) AGENCOURT_51357216 D. virilis EST Drosophila viri... 38 9.4 2
(EB570945) AGENCOURT_51105701 D. virilis EST Drosophila viri... 38 9.4 2
(EB560145) AGENCOURT_51116855 D. virilis EST Drosophila viri... 38 9.4 2
(EY380417) CAXA2863.fwd CAXA Helobdella robusta Subtracted L... 34 9.4 3
(CS623672) Sequence 223 from Patent WO2006071466. 34 9.4 3
(EB560605) AGENCOURT_51877220 D. virilis EST Drosophila viri... 38 9.5 2
(CT010430) Mouse DNA sequence from clone RP23-335P18 on chro... 40 9.5 6
(EB560671) AGENCOURT_51198572 D. virilis EST Drosophila viri... 38 9.6 2
(AU073682) Dictyostelium discoideum slug cDNA, clone SSH819. 32 9.6 3
(AF442957) Ostrinia nubilalis mitochondrion, complete genome. 44 9.6 3
(AF467260) Ostrinia furnacalis mitochondrion, complete genome. 44 9.6 3
(EB570924) AGENCOURT_51958786 D. virilis EST Drosophila viri... 38 9.7 2
(CO108964) GR__Eb0041A23.r GR__Eb Gossypium raimondii cDNA c... 32 9.7 3
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 44 9.7 3
(EB561359) AGENCOURT_51102538 D. virilis EST Drosophila viri... 38 9.8 2
(AJ581661) Dictyostelium discoideum partial dstB gene for Dd... 40 9.8 3
(EK308731) 1095462389290 Global-Ocean-Sampling_GS-31-01-01-1... 44 9.8 2
(CL354072) RPCI44_405K12.f RPCI-44 Sus scrofa genomic clone ... 32 9.9 4
(AC106469) Rattus norvegicus clone CH230-212N10, WORKING DRA... 34 9.9 2
(EB572683) AGENCOURT_51898786 D. virilis EST Drosophila viri... 38 9.9 2
(EJ784706) 1093017305207 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.9 2
(AC183573) Canis familiaris chromosome 8, clone XX-208N15, c... 34 9.9 2
(BJ426611) Dictyostelium discoideum cDNA clone:ddv59i15, 5' ... 36 10.0 2
(AC137455) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 34 10.0 2

>(BJ342675) Dictyostelium discoideum cDNA clone:dda1h06, 3' end,
single read.
Length = 464

Score = 496 bits (250), Expect(3) = 0.0
Identities = 250/250 (100%)
Strand = Plus / Minus


Query: 1942 cggattggattcattggatcattatcagcttttagagttggaatcaagttttcataatgg 2001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cggattggattcattggatcattatcagcttttagagttggaatcaagttttcataatgg 218


Query: 2002 tttaaaacaaattggttctataaaagatcaaagatacctcaatcgtttggtttcactgga 2061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tttaaaacaaattggttctataaaagatcaaagatacctcaatcgtttggtttcactgga 158


Query: 2062 aaaagagaaagatcaattaaaagatcaaaatagttgtgtcatttgcgcttcaaaccctcc 2121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aaaagagaaagatcaattaaaagatcaaaatagttgtgtcatttgcgcttcaaaccctcc 98


Query: 2122 aaatattgtattactaccatgtagacatagttcattatgttcagattgttgttcaaaatt 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aaatattgtattactaccatgtagacatagttcattatgttcagattgttgttcaaaatt 38


Query: 2182 aacaaaatgt 2191
||||||||||
Sbjct: 37 aacaaaatgt 28

Score = 254 bits (128), Expect(3) = 0.0
Identities = 128/128 (100%)
Strand = Plus / Minus


Query: 1765 tattaatagattatcaatttcatcaaatagttcaacattatcatcaaaagatagttttta 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tattaatagattatcaatttcatcaaatagttcaacattatcatcaaaagatagttttta 395


Query: 1825 ttttgaatcaaagattcaagaattatcaaatcaattaaaagagaaacaacaagctattac 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttttgaatcaaagattcaagaattatcaaatcaattaaaagagaaacaacaagctattac 335


Query: 1885 cgatcgtg 1892
||||||||
Sbjct: 334 cgatcgtg 327

Score = 46.1 bits (23), Expect(3) = 0.0
Identities = 26/26 (100%)
Strand = Plus / Minus


Query: 2192 ccaatttgtagatncccatattgaaa 2217
||||||||||||||||||||||||||
Sbjct: 26 ccaatttgtagatncccatattgaaa 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,848,296,956
Number of extensions: 124773588
Number of successful extensions: 12626308
Number of sequences better than 10.0: 379
Length of query: 2217
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 2193
Effective length of database: 96,409,374,237
Effective search space: 211425757701741
Effective search space used: 211425757701741
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Contig-U15517-1Q.Seq.d
(2217 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q7M3S9) RecName: Full=RING finger protein B; Short=Pro... 269 3e-70
S68824(S68824)rngB protein, cytosolic - slime mold (Dictyosteliu... 268 5e-70
BT061901_1(BT061901|pid:none) Zea mays full-length cDNA clone ZM... 59 6e-07
EU961520_1(EU961520|pid:none) Zea mays clone 236111 CONSTANS int... 59 6e-07
AY125510_1(AY125510|pid:none) Arabidopsis thaliana AT5g19080/T16... 59 1e-06
T21007(T21007) hypothetical protein F16A11.1 - Caenorhabditis el... 57 2e-06
AC148486_7(AC148486|pid:none) Medicago truncatula clone mth2-56d... 57 2e-06
AC146570_3(AC146570|pid:none) Medicago truncatula clone mth2-103... 57 4e-06
(Q62210) RecName: Full=Baculoviral IAP repeat-containing protein... 57 4e-06
BT006357_1(BT006357|pid:none) Arabidopsis thaliana At5g19080/T16... 57 4e-06
AK100160_1(AK100160|pid:none) Oryza sativa Japonica Group cDNA c... 57 4e-06
BT061187_1(BT061187|pid:none) Zea mays full-length cDNA clone ZM... 56 5e-06
AF190020_1(AF190020|pid:none) Rattus norvegicus inhibitor of apo... 56 6e-06
CR859301_1(CR859301|pid:none) Pongo abelii mRNA; cDNA DKFZp468N1... 55 8e-06
BC129545_1(BC129545|pid:none) Xenopus laevis hypothetical protei... 55 8e-06
L49441_1(L49441|pid:none) Drosophila melanogaster apoptosis 2 in... 55 8e-06
U38809_1(U38809|pid:none) Drosophila melanogaster IAP homolog A ... 55 8e-06
U45881_1(U45881|pid:none) Drosophila melanogaster inhibitor of a... 55 8e-06
(O62640) RecName: Full=Putative inhibitor of apoptosis; &JC5964... 55 8e-06
AK303197_1(AK303197|pid:none) Homo sapiens cDNA FLJ57692 complet... 55 1e-05
AB005240_11(AB005240|pid:none) Arabidopsis thaliana genomic DNA,... 55 1e-05
AY184377_1(AY184377|pid:none) Ictalurus punctatus inhibitor of a... 55 1e-05
AE014296_777(AE014296|pid:none) Drosophila melanogaster chromoso... 55 1e-05
DQ223014_1(DQ223014|pid:none) Canis familiaris baculoviral IAP r... 55 1e-05
AY247786_1(AY247786|pid:none) Danio rerio inhibitor of apoptosis... 54 2e-05
AB354113_1(AB354113|pid:none) Carassius auratus birc2 mRNA for b... 54 2e-05
AY051832_1(AY051832|pid:none) Drosophila melanogaster LD33756 fu... 54 2e-05
S42526(S42526;S22126) finger protein unkempt - fruit fly (Drosop... 54 2e-05
EU965370_1(EU965370|pid:none) Zea mays clone 285598 CONSTANS int... 54 2e-05
BC155423_1(BC155423|pid:none) Xenopus tropicalis hypothetical pr... 54 2e-05
EU960532_1(EU960532|pid:none) Zea mays clone 225881 CONSTANS int... 54 2e-05
AB220514_1(AB220514|pid:none) Macaca fascicularis mRNA, clone Qn... 54 3e-05
AF223395_1(AF223395|pid:none) Petunia x hybrida S-ribonuclease b... 53 4e-05
(Q13489) RecName: Full=Baculoviral IAP repeat-containing protein... 53 4e-05
AF070674_1(AF070674|pid:none) Homo sapiens inhibitor of apoptosi... 53 4e-05
DQ250022_1(DQ250022|pid:none) Petunia integrifolia subsp. inflat... 53 4e-05
AM494955_124(AM494955|pid:none) Leishmania braziliensis chromoso... 53 4e-05
BC074562_1(BC074562|pid:none) Xenopus tropicalis baculoviral IAP... 53 4e-05
(O08863) RecName: Full=Baculoviral IAP repeat-containing protein... 53 5e-05
EF214982_1(EF214982|pid:none) Callithrix jacchus clone M13-51.1_... 53 5e-05
AK315318_1(AK315318|pid:none) Homo sapiens cDNA, FLJ96350, highl... 53 5e-05
(A1E2V0) RecName: Full=Baculoviral IAP repeat-containing protein... 53 5e-05
BC015063_1(BC015063|pid:none) Homo sapiens cell growth regulator... 53 5e-05
(B0G0Y5) RecName: Full=Myb-like protein AA; 52 7e-05
AB179092_1(AB179092|pid:none) Macaca fascicularis testis cDNA cl... 52 7e-05
AC015985_17(AC015985|pid:none) Arabidopsis thaliana chromosome I... 52 7e-05
BC028424_1(BC028424|pid:none) Homo sapiens ring finger and FYVE-... 52 7e-05
AK289478_1(AK289478|pid:none) Homo sapiens cDNA FLJ77881 complet... 52 7e-05
EF085196_1(EF085196|pid:none) Picea sitchensis clone WS0296_I06 ... 52 7e-05
BT055963_1(BT055963|pid:none) Zea mays full-length cDNA clone ZM... 52 7e-05
(Q90660) RecName: Full=Inhibitor of apoptosis protein; ... 52 9e-05
AB271956_1(AB271956|pid:none) Sus scrofa MGRN1 mRNA for mahoguni... 52 9e-05
AC099040_16(AC099040|pid:none) Oryza sativa chromosome 10 BAC OS... 52 9e-05
AY229987_84(AY229987|pid:none) Cryptophlebia leucotreta granulov... 52 9e-05
AF039047_10(AF039047|pid:none) Caenorhabditis elegans cosmid K11... 52 9e-05
T19204(T19204) hypothetical protein C11H1.3 - Caenorhabditis ele... 52 9e-05
AM494946_44(AM494946|pid:none) Leishmania braziliensis chromosom... 52 1e-04
EF624461_1(EF624461|pid:none) Oryza sativa (japonica cultivar-gr... 52 1e-04
AC087797_3(AC087797|pid:none) Oryza sativa chromosome 3 BAC OSJN... 52 1e-04
AK222441_1(AK222441|pid:none) Ciona intestinalis mRNA for zinc f... 52 1e-04
AY545464_1(AY545464|pid:none) Solanum chacoense S-RNase binding ... 52 1e-04
AY490246_1(AY490246|pid:none) Lycopersicon esculentum CONSTANS i... 52 1e-04
AE014298_2033(AE014298|pid:none) Drosophila melanogaster chromos... 52 1e-04
AJ293945_1(AJ293945|pid:none) Paramecium tetraurelia macronuclea... 52 1e-04
AC010852_7(AC010852|pid:none) Arabidopsis thaliana chromosome 1 ... 52 1e-04
AK176213_1(AK176213|pid:none) Arabidopsis thaliana mRNA, complet... 52 1e-04
EF114675_1(EF114675|pid:none) Penaeus monodon inhibitor of apopt... 52 1e-04
EF085152_1(EF085152|pid:none) Picea sitchensis clone WS0272_C07 ... 51 2e-04
AC152123_7(AC152123|pid:none) Genomic sequence for broccoli [Bra... 51 2e-04
CT005248_56(CT005248|pid:none) Leishmania major strain Friedlin,... 51 2e-04
AY390600_1(AY390600|pid:none) Solanum chacoense S-RNase-binding ... 51 2e-04
AY814904_1(AY814904|pid:none) Schistosoma japonicum SJCHGC09314 ... 51 2e-04
BC061651_1(BC061651|pid:none) Xenopus laevis hypothetical protei... 51 2e-04
AM502227_41(AM502227|pid:none) Leishmania infantum chromosome 9. 51 2e-04
EF144875_1(EF144875|pid:none) Populus trichocarpa clone WS01119_... 51 2e-04
BC090462_1(BC090462|pid:none) Danio rerio hypothetical protein L... 50 3e-04
EF471398_1(EF471398|pid:none) Homo sapiens mahogunin variant 2.2... 50 3e-04
AB236755_1(AB236755|pid:none) Trifolium pratense RNA for hypothe... 50 3e-04
AL928800_6(AL928800|pid:none) Zebrafish DNA sequence from clone ... 50 3e-04
(O60291) RecName: Full=Probable E3 ubiquitin-protein ligase MGRN... 50 3e-04
EF471397_1(EF471397|pid:none) Homo sapiens mahogunin variant 1.2... 50 3e-04
BT076963_1(BT076963|pid:none) Caligus rogercresseyi clone crog-e... 50 3e-04
AJ720958_1(AJ720958|pid:none) Gallus gallus mRNA for hypothetica... 50 3e-04
BC050389_1(BC050389|pid:none) Homo sapiens mahogunin, ring finge... 50 3e-04
AK222451_1(AK222451|pid:none) Ciona intestinalis mRNA for zinc f... 50 3e-04
AM502254_293(AM502254|pid:none) Leishmania infantum chromosome 36. 50 3e-04
AM451749_3(AM451749|pid:none) Vitis vinifera contig VV78X233142.... 50 3e-04
AC068924_30(AC068924|pid:none) Oryza sativa chromosome 10 BAC OS... 50 3e-04
(Q6ZQM0) RecName: Full=E3 ubiquitin-protein ligase rififylin; ... 50 3e-04
AM494972_406(AM494972|pid:none) Leishmania braziliensis chromoso... 50 3e-04
AF434814_1(AF434814|pid:none) Mus musculus fring mRNA, complete ... 50 3e-04
BC079216_1(BC079216|pid:none) Rattus norvegicus ring finger and ... 50 3e-04
AK150541_1(AK150541|pid:none) Mus musculus bone marrow macrophag... 50 3e-04
U53466_94(U53466|pid:none) Cydia pomonella granulovirus, complet... 50 3e-04
AC013354_5(AC013354|pid:none) Genomic sequence for Arabidopsis t... 50 3e-04
(Q8CIN9) RecName: Full=E3 ubiquitin-protein ligase rififylin; ... 50 3e-04
AK150213_1(AK150213|pid:none) Mus musculus bone marrow macrophag... 50 3e-04
AK169393_1(AK169393|pid:none) Mus musculus 17 days pregnant adul... 50 3e-04
AY559037_1(AY559037|pid:none) Aedes aegypti inhibitor of apoptos... 50 5e-04
BC015681_1(BC015681|pid:none) Homo sapiens ring finger and FYVE-... 50 5e-04
EU258200_110(EU258200|pid:none) Spodoptera frugiperda MNPV isola... 50 5e-04
BC004231_1(BC004231|pid:none) Homo sapiens ring finger protein 1... 50 5e-04
AX397898_1(AX397898|pid:none) Sequence 1 from Patent WO0220562. 50 5e-04
AB067504_1(AB067504|pid:none) Homo sapiens mRNA for KIAA1917 pro... 50 5e-04
AF451898_135(AF451898|pid:none) Heliothis zea virus 1, complete ... 50 5e-04
DQ307171_1(DQ307171|pid:none) Glossina morsitans morsitans clone... 50 5e-04
(Q8WZ73) RecName: Full=E3 ubiquitin-protein ligase rififylin; ... 50 5e-04
DQ993355_1(DQ993355|pid:none) Aedes aegypti inhibitor of apoptos... 50 5e-04
AY736005_1(AY736005|pid:none) Aedes aegypti inihibitor of apopto... 49 6e-04
BC037677_1(BC037677|pid:none) Mus musculus cell growth regulator... 49 6e-04
AB197252_1(AB197252|pid:none) Xenopus laevis mRNA for xXIAP, com... 49 6e-04
AF447592_1(AF447592|pid:none) Ochlerotatus triseriatus inhibitor... 49 6e-04
AF488809_1(AF488809|pid:none) Aedes albopictus inhibitor of apot... 49 6e-04
BC169996_1(BC169996|pid:none) Xenopus laevis IAP-like protein, m... 49 8e-04
AY088707_1(AY088707|pid:none) Arabidopsis thaliana clone 924 mRN... 49 8e-04
AL645861_13(AL645861|pid:none) Mouse DNA sequence from clone RP2... 49 8e-04
AP008215_601(AP008215|pid:none) Oryza sativa (japonica cultivar-... 49 8e-04
AK169566_1(AK169566|pid:none) Mus musculus 2 days neonate thymus... 49 8e-04
AK153407_1(AK153407|pid:none) Mus musculus bone marrow macrophag... 49 8e-04
(P97587) RecName: Full=Cell growth regulator with RING finger do... 49 8e-04
(Q7ZUL9) RecName: Full=Probable E3 ubiquitin-protein ligase MGRN... 49 8e-04
BC171584_1(BC171584|pid:none) Danio rerio mahogunin, ring finger... 49 8e-04
AJ297298_1(AJ297298|pid:none) Pinus pinaster partial mRNA for pu... 49 8e-04
(Q3TEL6) RecName: Full=RING finger protein 157; 49 8e-04
L49440_1(L49440|pid:none) Drosophila melanogaster apoptosis 1 in... 49 8e-04
(Q9D074) RecName: Full=Probable E3 ubiquitin-protein ligase MGRN... 49 8e-04
AK228124_1(AK228124|pid:none) Arabidopsis thaliana mRNA for hypo... 49 8e-04
AL645861_11(AL645861|pid:none) Mouse DNA sequence from clone RP2... 49 8e-04
AK150176_1(AK150176|pid:none) Mus musculus bone marrow macrophag... 49 8e-04
(Q24306) RecName: Full=Apoptosis 1 inhibitor; AltName: Full=Inhi... 49 8e-04
T18504(T18504)hypothetical protein C0740c - malaria parasite (Pl... 49 0.001
AB062739_1(AB062739|pid:none) Arabidopsis thaliana MKRP2 mRNA fo... 49 0.001
AY091060_1(AY091060|pid:none) Arabidopsis thaliana putative kine... 49 0.001
AM910990_249(AM910990|pid:none) Plasmodium knowlesi strain H chr... 49 0.001
BC090590_1(BC090590|pid:none) Xenopus tropicalis ring finger and... 48 0.001
AC161864_1(AC161864|pid:none) Medicago truncatula clone mth2-69d... 48 0.001
DQ517337_32(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com... 48 0.001
AC006841_13(AC006841|pid:none) Arabidopsis thaliana chromosome 2... 48 0.001
AF499596_86(AF499596|pid:none) Phthorimaea operculella granulovi... 48 0.002
AY909512_1(AY909512|pid:none) Siniperca chuatsi clone C376 apopt... 48 0.002
AB171795_1(AB171795|pid:none) Macaca fascicularis brain cDNA clo... 48 0.002
BT035359_1(BT035359|pid:none) Zea mays full-length cDNA clone ZM... 48 0.002
BT054232_1(BT054232|pid:none) Zea mays full-length cDNA clone ZM... 48 0.002
CR940347_203(CR940347|pid:none) Theileria annulata strain Ankara... 48 0.002
AM471824_2(AM471824|pid:none) Vitis vinifera contig VV78X201397.... 48 0.002
AL954707_5(AL954707|pid:none) Mouse DNA sequence from clone RP23... 47 0.003
AE016819_445(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 47 0.003
AY864330_62(AY864330|pid:none) Chrysodeixis chalcites nucleopoly... 47 0.003
AK299052_1(AK299052|pid:none) Homo sapiens cDNA FLJ60814 complet... 47 0.003
CT005257_160(CT005257|pid:none) Leishmania major strain Friedlin... 47 0.003
AY098935_1(AY098935|pid:none) Homo sapiens FYVE-RING finger prot... 47 0.003
AM502236_157(AM502236|pid:none) Leishmania infantum chromosome 18. 47 0.003
BC149770_1(BC149770|pid:none) Bos taurus myosin regulatory light... 47 0.003
AM398843_74(AM398843|pid:none) Spodoptera frugiperda ascovirus 1... 47 0.003
AY087533_1(AY087533|pid:none) Arabidopsis thaliana clone 36412 m... 47 0.003
CQ789350_1(CQ789350|pid:none) Sequence 1 from Patent WO200401799... 47 0.004
CP000596_71(CP000596|pid:none) Ostreococcus lucimarinus CCE9901 ... 47 0.004
AF063866_248(AF063866|pid:none) Melanoplus sanguinipes entomopox... 47 0.004
AK313883_1(AK313883|pid:none) Homo sapiens cDNA, FLJ94517, highl... 47 0.004
AM502227_127(AM502227|pid:none) Leishmania infantum chromosome 9. 47 0.004
AY893036_1(AY893036|pid:none) Synthetic construct Homo sapiens c... 47 0.004
BC161793_1(BC161793|pid:none) Xenopus tropicalis hypothetical pr... 47 0.004
CR954201_543(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 47 0.004
BT080230_1(BT080230|pid:none) Caligus clemensi clone ccle-evs-50... 47 0.004
(Q95M72) RecName: Full=Baculoviral IAP repeat-containing protein... 47 0.004
AM494947_124(AM494947|pid:none) Leishmania braziliensis chromoso... 47 0.004
AF304334_1(AF304334|pid:none) Rattus norvegicus clone 2 inhibito... 46 0.005
BC124268_1(BC124268|pid:none) Danio rerio zgc:153175, mRNA (cDNA... 46 0.005
AF187016_1(AF187016|pid:none) Homo sapiens myosin regulatory lig... 46 0.005
EF203088_98(EF203088|pid:none) Gryllus bimaculatus nudivirus, co... 46 0.005
(Q9CZ54) RecName: Full=RING finger and SPRY domain-containing pr... 46 0.005
BC080063_1(BC080063|pid:none) Xenopus laevis MGC84042 protein, m... 46 0.005
(Q8WY64) RecName: Full=E3 ubiquitin-protein ligase MYLIP; ... 46 0.005
AF183429_1(AF183429|pid:none) Rattus norvegicus inhibitor of apo... 46 0.005
AK031153_1(AK031153|pid:none) Mus musculus 13 days embryo foreli... 46 0.005
AF304333_1(AF304333|pid:none) Rattus norvegicus clone 1 inhibito... 46 0.005
AJ851471_1(AJ851471|pid:none) Gallus gallus mRNA for hypothetica... 46 0.005
AK172567_1(AK172567|pid:none) Mus musculus activated spleen cDNA... 46 0.005
CP001328_355(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 46 0.005
AY892142_1(AY892142|pid:none) Synthetic construct Homo sapiens c... 46 0.005
(Q5M7X9) RecName: Full=Mitochondrial ubiquitin ligase activator ... 46 0.005
AF547984_89(AF547984|pid:none) Adoxophyes orana granulovirus, co... 46 0.005
AY155274_1(AY155274|pid:none) Bombyx mori inhibitor of apoptosis... 46 0.007
AK229071_1(AK229071|pid:none) Arabidopsis thaliana mRNA for hypo... 46 0.007
BC014475_1(BC014475|pid:none) Homo sapiens baculoviral IAP repea... 46 0.007
AF281073_1(AF281073|pid:none) Bombyx mori inhibitor of apoptosis... 46 0.007
AF311388_1(AF311388|pid:none) Homo sapiens livin inhibitor-of-ap... 46 0.007
BC077535_1(BC077535|pid:none) Xenopus laevis MGC83329 protein, m... 46 0.007
FN357513_14(FN357513|pid:none) Schistosoma mansoni genome sequen... 46 0.007
AP008210_2259(AP008210|pid:none) Oryza sativa (japonica cultivar... 45 0.009
AL732351_6(AL732351|pid:none) Oryza sativa genomic DNA, chromoso... 45 0.009
AL606457_18(AL606457|pid:none) Oryza sativa genomic DNA, chromos... 45 0.009
EF125867_18(EF125867|pid:none) Maruca vitrata MNPV, complete gen... 45 0.009
AF266700_1(AF266700|pid:none) Helicoverpa armigera nuclear polyh... 45 0.009
AC174297_6(AC174297|pid:none) Medicago truncatula clone mth2-73p... 45 0.009
BC133126_1(BC133126|pid:none) Danio rerio X-linked inhibitor of ... 45 0.009
BC055246_1(BC055246|pid:none) Danio rerio X-linked inhibitor of ... 45 0.009
AY603038_1(AY603038|pid:none) Canis familiaris X-linked inhibito... 45 0.009
BC161486_1(BC161486|pid:none) Xenopus tropicalis cDNA clone MGC:... 45 0.011
AE013599_1686(AE013599|pid:none) Drosophila melanogaster chromos... 45 0.011
BC160454_1(BC160454|pid:none) Xenopus tropicalis unkempt homolog... 45 0.011
BC039318_1(BC039318|pid:none) Homo sapiens baculoviral IAP repea... 45 0.011
AK102708_1(AK102708|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.011
AX370787_1(AX370787|pid:none) Sequence 1 from Patent WO0210381. 45 0.011
AC092212_59(AC092212|pid:none) Trypanosoma brucei chromosome 8 c... 45 0.011
AF512031_30(AF512031|pid:none) Choristoneura fumiferana MNPV pol... 45 0.011
AP004150_5(AP004150|pid:none) Oryza sativa Japonica Group genomi... 45 0.011
AK222447_1(AK222447|pid:none) Ciona intestinalis mRNA for zinc f... 45 0.011
AY058770_1(AY058770|pid:none) Drosophila melanogaster SD05126 fu... 45 0.011
AK040836_1(AK040836|pid:none) Mus musculus adult male aorta and ... 45 0.015
BC010206_1(BC010206|pid:none) Mus musculus myosin regulatory lig... 45 0.015
EU780426_115(EU780426|pid:none) Spodoptera litura nucleopolyhedr... 45 0.015
BT059463_1(BT059463|pid:none) Salmo salar clone ssal-rgf-513-225... 45 0.015
(Q8BM54) RecName: Full=E3 ubiquitin-protein ligase MYLIP; ... 45 0.015
FN357317_50(FN357317|pid:none) Schistosoma mansoni genome sequen... 45 0.015
BT084874_1(BT084874|pid:none) Zea mays full-length cDNA clone ZM... 45 0.015
AK171888_1(AK171888|pid:none) Mus musculus activated spleen cDNA... 45 0.015
BC123024_1(BC123024|pid:none) Xenopus tropicalis hypothetical pr... 44 0.019
AM472308_2(AM472308|pid:none) Vitis vinifera contig VV78X181029.... 44 0.019
DQ517337_9(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, comp... 44 0.019
T31548(T31548)hypothetical protein Y47D3A.22 - Caenorhabditis el... 44 0.019
(Q969V5) RecName: Full=Mitochondrial ubiquitin ligase activator ... 44 0.019
CU928173_383(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 44 0.019
BC087326_1(BC087326|pid:none) Xenopus laevis hypothetical LOC495... 44 0.019
EU976467_1(EU976467|pid:none) Zea mays clone 895080 hypothetical... 44 0.019
BC080411_1(BC080411|pid:none) Xenopus laevis MGC86306 protein, m... 44 0.019
AK303820_1(AK303820|pid:none) Homo sapiens cDNA FLJ55316 complet... 44 0.019
(Q4R7G8) RecName: Full=Mitochondrial ubiquitin ligase activator ... 44 0.019
(Q84JU6) RecName: Full=E3 ubiquitin-protein ligase HOS1; ... 44 0.019
AF303741_158(AF303741|pid:none) Chilo iridescent virus complete ... 44 0.019
BC118765_1(BC118765|pid:none) Xenopus tropicalis hypothetical pr... 44 0.019
AC003000_13(AC003000|pid:none) Arabidopsis thaliana chromosome 2... 44 0.019
AM709785_1(AM709785|pid:none) Spodoptera littoralis mRNA for inh... 44 0.025
EU952813_1(EU952813|pid:none) Zea mays clone 1290460 S-ribonucle... 44 0.025
D36828(D36828;C72853)orf13 protein - Autographa californica nucl... 44 0.025
BC072265_1(BC072265|pid:none) Xenopus laevis hypothetical protei... 44 0.025
EU258200_86(EU258200|pid:none) Spodoptera frugiperda MNPV isolat... 44 0.025
AK085078_1(AK085078|pid:none) Mus musculus 13 days embryo lung c... 44 0.033
AK122642_1(AK122642|pid:none) Homo sapiens cDNA FLJ16070 fis, cl... 44 0.033
EU839994_128(EU839994|pid:none) Agrotis ipsilon multiple nucleop... 44 0.033
AY522332_53(AY522332|pid:none) Agrotis segetum granulovirus, com... 44 0.033
AK033164_1(AK033164|pid:none) Mus musculus 15 days embryo male t... 44 0.033
BC158712_1(BC158712|pid:none) Rattus norvegicus ring finger prot... 44 0.033
BC111036_1(BC111036|pid:none) Mus musculus ring finger protein 2... 44 0.033
AF186378_1(AF186378|pid:none) Spodoptera frugiperda inhibitor of... 44 0.033
AC073906_37(AC073906|pid:none) Trypanosoma brucei chromosome 6 c... 44 0.033
BC130123_1(BC130123|pid:none) Xenopus laevis hypothetical protei... 44 0.033
DQ813662_71(DQ813662|pid:none) Anticarsia gemmatalis nucleopolyh... 44 0.033
DQ643392_21(DQ643392|pid:none) Aedes taeniorhynchus iridescent v... 44 0.033
AK056305_1(AK056305|pid:none) Homo sapiens cDNA FLJ31743 fis, cl... 43 0.043
AB384779_1(AB384779|pid:none) Synthetic construct DNA, clone: pF... 43 0.043
AP008215_1440(AP008215|pid:none) Oryza sativa (japonica cultivar... 43 0.043
(Q5FWH2) RecName: Full=RING finger protein unkempt-like; &BC089... 43 0.043
AK091589_1(AK091589|pid:none) Homo sapiens cDNA FLJ34270 fis, cl... 43 0.043
AF512031_36(AF512031|pid:none) Choristoneura fumiferana MNPV pol... 43 0.043
FJ882854_19(FJ882854|pid:none) Bombyx mandarina nucleopolyhedrov... 43 0.043
AY423020_1(AY423020|pid:none) Danio rerio myosin regulatory ligh... 43 0.043
AK222449_1(AK222449|pid:none) Ciona intestinalis mRNA for zinc f... 43 0.043
AY434450_1(AY434450|pid:none) Danio rerio myosin regulatory ligh... 43 0.043
AK004898_1(AK004898|pid:none) Mus musculus adult male liver cDNA... 43 0.043
BC065679_1(BC065679|pid:none) Danio rerio myosin regulatory ligh... 43 0.043
(Q6TEM9) RecName: Full=E3 ubiquitin-protein ligase MYLIP-A; ... 43 0.043
AM398843_25(AM398843|pid:none) Spodoptera frugiperda ascovirus 1... 43 0.043
AC002292_13(AC002292|pid:none) Arabidopsis thaliana BAC F8A5, co... 43 0.043
AK056203_1(AK056203|pid:none) Homo sapiens cDNA FLJ31641 fis, cl... 43 0.043
DQ288858_106(DQ288858|pid:none) Spodoptera litura granulovirus i... 43 0.043
AK229278_1(AK229278|pid:none) Arabidopsis thaliana mRNA for hypo... 43 0.043
AB210566_1(AB210566|pid:none) Ciona intestinalis Ci-Neuralized-a... 43 0.043
L33180_19(L33180|pid:none) Bombyx mori nuclear polyhedrosis viru... 43 0.056
AC083835_8(AC083835|pid:none) Arabidopsis thaliana chromosome 1 ... 43 0.056
BC118805_1(BC118805|pid:none) Xenopus tropicalis ring finger pro... 43 0.056
DQ517337_82(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com... 43 0.056
(Q6FWF3) RecName: Full=E3 ubiquitin-protein ligase BRE1; ... 43 0.056
(P29503) RecName: Full=Protein neuralized; &AE014297_887(AE0142... 42 0.073
AB006708_10(AB006708|pid:none) Arabidopsis thaliana genomic DNA,... 42 0.073
AY136340_1(AY136340|pid:none) Arabidopsis thaliana putative prot... 42 0.073
(Q05AK5) RecName: Full=E3 ubiquitin-protein ligase MYLIP-B; ... 42 0.073
(Q8CJC5) RecName: Full=E3 ubiquitin-protein ligase LINCR; ... 42 0.073
DQ160094_1(DQ160094|pid:none) Taraxacum officinale TO65-3 (To65-... 42 0.073
AE014297_885(AE014297|pid:none) Drosophila melanogaster chromoso... 42 0.073
AY136366_1(AY136366|pid:none) Arabidopsis thaliana unknown prote... 42 0.095
AF169823_110(AF169823|pid:none) Spodoptera exigua nucleopolyhedr... 42 0.095
AF119227_1(AF119227|pid:none) Epiphyas postvittana nucleopolyhed... 42 0.095
AY327402_67(AY327402|pid:none) Choristoneura fumiferana defectiv... 42 0.095
DQ837165_54(DQ837165|pid:none) Ecotropis obliqua NPV strain A1, ... 42 0.095
U40945_5(U40945|pid:none) Caenorhabditis elegans cosmid F10D7, c... 42 0.095
(Q5M870) RecName: Full=E3 ubiquitin-protein ligase LINCR; ... 42 0.095
AC005314_30(AC005314|pid:none) Arabidopsis thaliana chromosome 2... 42 0.095
AK025439_1(AK025439|pid:none) Homo sapiens cDNA: FLJ21786 fis, c... 42 0.095
CR761586_1(CR761586|pid:none) Xenopus tropicalis finished cDNA, ... 42 0.095
AY087705_1(AY087705|pid:none) Arabidopsis thaliana clone 37809 m... 42 0.095
BC135701_1(BC135701|pid:none) Xenopus tropicalis cDNA clone IMAG... 42 0.095
BC128669_1(BC128669|pid:none) Xenopus laevis hypothetical protei... 42 0.095
BC161012_1(BC161012|pid:none) Xenopus tropicalis mex-3 homolog C... 42 0.095
AF271059_61(AF271059|pid:none) Heliocoverpa armigera nucleopolyh... 42 0.095
AE017344_204(AE017344|pid:none) Cryptococcus neoformans var. neo... 42 0.095
AB088848_1(AB088848|pid:none) Hyphantria cunea nucleopolyhedrovi... 42 0.095
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 42 0.12
AK229958_1(AK229958|pid:none) Arabidopsis thaliana mRNA for hypo... 42 0.12
BC161083_1(BC161083|pid:none) Xenopus tropicalis mindbomb homolo... 42 0.12
AF303045_61(AF303045|pid:none) Helicoverpa armigera nuclear poly... 42 0.12
BC110246_1(BC110246|pid:none) Bos taurus ring finger protein 34,... 42 0.12
(Q5E9J6) RecName: Full=E3 ubiquitin-protein ligase RNF34; ... 42 0.12
BT040274_1(BT040274|pid:none) Zea mays full-length cDNA clone ZM... 42 0.12
CR926044_1(CR926044|pid:none) Pongo abelii mRNA; cDNA DKFZp459H1... 42 0.12
AY157968_1(AY157968|pid:none) Rattus norvegicus RING finger prot... 42 0.12
AB084914_1(AB084914|pid:none) Homo sapiens hRFI mRNA for hypothe... 42 0.12
AY305852_1(AY305852|pid:none) Elaeis guineensis clone MLT1 S-rib... 42 0.12
EU780426_91(EU780426|pid:none) Spodoptera litura nucleopolyhedro... 42 0.12
CR861076_1(CR861076|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 42 0.12
(Q969K3) RecName: Full=E3 ubiquitin-protein ligase RNF34; ... 42 0.12
DQ517337_56(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com... 42 0.12
EU958063_1(EU958063|pid:none) Zea mays clone 1670995 S-ribonucle... 42 0.12
EU730893_131(EU730893|pid:none) Helicoverpa armigera multiple nu... 42 0.12
BC044808_1(BC044808|pid:none) Homo sapiens chromosome 14 open re... 42 0.12
AB088849_1(AB088849|pid:none) Hyphantria cunea nucleopolyhedrovi... 42 0.12
(Q99KR6) RecName: Full=E3 ubiquitin-protein ligase RNF34; ... 42 0.12
CR548612_300(CR548612|pid:none) Paramecium tetraurelia macronucl... 41 0.16
BT040951_1(BT040951|pid:none) Zea mays full-length cDNA clone ZM... 41 0.16
AB168336_1(AB168336|pid:none) Macaca fascicularis testis cDNA cl... 41 0.16
AY522332_106(AY522332|pid:none) Agrotis segetum granulovirus, co... 41 0.16
CR940347_249(CR940347|pid:none) Theileria annulata strain Ankara... 41 0.16
EU255577_139(EU255577|pid:none) Helicoverpa armigera granuloviru... 41 0.16
(Q5ZIJ9) RecName: Full=E3 ubiquitin-protein ligase MIB2; ... 41 0.16
EU951808_1(EU951808|pid:none) Zea mays clone 1060968 unknown mRNA. 41 0.16
(Q2HJ46) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 41 0.16
CR954209_268(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 41 0.21
BC151099_1(BC151099|pid:none) Mus musculus RIKEN cDNA 2900006K08... 41 0.21
AY491413_7(AY491413|pid:none) Mus musculus chromosome 17 clone B... 41 0.21
BC163626_1(BC163626|pid:none) Danio rerio mind bomb 2, mRNA (cDN... 41 0.21
AK120702_1(AK120702|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.21
BC073521_1(BC073521|pid:none) Xenopus laevis hypothetical protei... 41 0.21
EF148266_1(EF148266|pid:none) Populus trichocarpa x Populus delt... 41 0.21
AY086544_1(AY086544|pid:none) Arabidopsis thaliana clone 257053 ... 41 0.21
EF395147_1(EF395147|pid:none) Vassobia breviflora isolate v001 M... 41 0.21
AC017118_12(AC017118|pid:none) Genomic sequence for Arabidopsis ... 41 0.21
AF334030_64(AF334030|pid:none) Helicoverpa zea single nucleocaps... 41 0.21
AE017343_243(AE017343|pid:none) Cryptococcus neoformans var. neo... 41 0.21
S35371(S35371;S17312) finger protein neuralized - fruit fly (Dro... 41 0.21
(Q7ZX20) RecName: Full=E3 ubiquitin-protein ligase RNF8 A; ... 41 0.21
BC097606_1(BC097606|pid:none) Xenopus laevis hypothetical protei... 41 0.21
(Q5R4I2) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 41 0.21
BC150842_1(BC150842|pid:none) Mus musculus unkempt-like (Drosoph... 41 0.21
EU959468_1(EU959468|pid:none) Zea mays clone 218243 inhibitor of... 41 0.21
AF303741_176(AF303741|pid:none) Chilo iridescent virus complete ... 41 0.21
AK002416_1(AK002416|pid:none) Mus musculus adult male kidney cDN... 40 0.28
AF180757_2(AF180757|pid:none) Epiphyas postvittana nucleopolyhed... 40 0.28
AK129331_1(AK129331|pid:none) Mus musculus mRNA for mKIAA1323 pr... 40 0.28
AY813682_1(AY813682|pid:none) Schistosoma japonicum SJCHGC09572 ... 40 0.28
EF085507_1(EF085507|pid:none) Picea sitchensis clone WS02722_C14... 40 0.28
BC022403_1(BC022403|pid:none) Homo sapiens mindbomb homolog 1 (D... 40 0.28
(Q8VCM5) RecName: Full=Mitochondrial ubiquitin ligase activator ... 40 0.28
BC083072_1(BC083072|pid:none) Mus musculus mindbomb homolog 1 (D... 40 0.28
(Q86XN8) RecName: Full=RNA-binding protein MEX3D; AltName: Full=... 40 0.28
(Q80SY4) RecName: Full=E3 ubiquitin-protein ligase MIB1; ... 40 0.28
AF458084_1(AF458084|pid:none) Homo sapiens bcl-2 ARE RNA binding... 40 0.28
AC005278_3(AC005278|pid:none) Arabidopsis thaliana chromosome 1 ... 40 0.28
AK075157_1(AK075157|pid:none) Homo sapiens cDNA FLJ90676 fis, cl... 40 0.28
BC019516_1(BC019516|pid:none) Mus musculus mitochondrial ubiquit... 40 0.28
AK170149_1(AK170149|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.28
AF169823_88(AF169823|pid:none) Spodoptera exigua nucleopolyhedro... 40 0.28
BC123994_1(BC123994|pid:none) Xenopus tropicalis hypothetical pr... 40 0.28
BC011287_1(BC011287|pid:none) Mus musculus mindbomb homolog 1 (D... 40 0.28
BC131662_1(BC131662|pid:none) Mus musculus mindbomb homolog 1 (D... 40 0.28
AM398843_16(AM398843|pid:none) Spodoptera frugiperda ascovirus 1... 40 0.28
AM920458_1(AM920458|pid:none) Penicillium chrysogenum Wisconsin ... 40 0.28
AK161848_1(AK161848|pid:none) Mus musculus adult male medulla ob... 40 0.28
AM920437_2668(AM920437|pid:none) Penicillium chrysogenum Wiscons... 40 0.28
AB107353_1(AB107353|pid:none) Homo sapiens mRNA for KIAA2031 pro... 40 0.28
(Q58651) RecName: Full=Uncharacterized protein MJ1254; &E64456(... 40 0.36
CP000123_804(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 40 0.36
BC125427_1(BC125427|pid:none) Mus musculus mex3 homolog C (C. el... 40 0.36
DQ813662_41(DQ813662|pid:none) Anticarsia gemmatalis nucleopolyh... 40 0.36
EU747721_134(EU747721|pid:none) Oryctes rhinoceros virus isolate... 40 0.36
BC108422_1(BC108422|pid:none) Mus musculus mex3 homolog C (C. el... 40 0.36
(Q5U5Q3) RecName: Full=RNA-binding protein MEX3C; AltName: Full=... 40 0.36
DQ334188_1(DQ334188|pid:none) Drosophila miranda CG5841 gene, pa... 40 0.36
AK241433_1(AK241433|pid:none) Oryza sativa Japonica Group cDNA, ... 40 0.36
AX405690_1(AX405690|pid:none) Sequence 105 from Patent WO0222660. 40 0.36
(Q4KLN8) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 40 0.36
(Q9SS90) RecName: Full=E3 ubiquitin-protein ligase RGLG1; ... 40 0.36
FJ227128_62(FJ227128|pid:none) Euproctis pseudoconspersa nucleop... 40 0.36
BC041122_1(BC041122|pid:none) Homo sapiens mex-3 homolog C (C. e... 40 0.36
AY327402_37(AY327402|pid:none) Choristoneura fumiferana defectiv... 40 0.36
AF208855_1(AF208855|pid:none) Homo sapiens BM-013 mRNA, complete... 40 0.36
(Q3V079) RecName: Full=Uncharacterized protein C14orf45 homolog;... 40 0.36
BC110209_1(BC110209|pid:none) Bos taurus mex-3 homolog C (C. ele... 40 0.36
AB463885_1(AB463885|pid:none) Synthetic construct DNA, clone: pF... 40 0.36
AM944365_1(AM944365|pid:none) Homo sapiens partial mRNA for puta... 40 0.47
(Q6GNY1) RecName: Full=E3 ubiquitin-protein ligase mib1; ... 40 0.47
CR380957_153(CR380957|pid:none) Candida glabrata strain CBS138 c... 40 0.47
AF539999_109(AF539999|pid:none) Mamestra configurata nucleopolyh... 40 0.47
(O10296) RecName: Full=Apoptosis inhibitor 1; AltName: Full=IAP-... 40 0.47
BT053436_1(BT053436|pid:none) Medicago truncatula clone MTYFP_FQ... 40 0.47
CP001327_254(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 40 0.47
AB013394_19(AB013394|pid:none) Arabidopsis thaliana genomic DNA,... 40 0.47
AE006467_4(AE006467|pid:none) Homo sapiens 16p13.3 sequence sect... 40 0.47
(Q9VUX2) RecName: Full=E3 ubiquitin-protein ligase mind-bomb; ... 40 0.47
AC113930_3(AC113930|pid:none) Oryza sativa (japonica cultivar-gr... 40 0.47
AB025608_19(AB025608|pid:none) Arabidopsis thaliana genomic DNA,... 39 0.61
AK022685_1(AK022685|pid:none) Homo sapiens cDNA FLJ12623 fis, cl... 39 0.61
BC069870_1(BC069870|pid:none) Mus musculus mindbomb homolog 1 (D... 39 0.61
T45063(T45063)hypothetical protein c316G12.4 [imported] - human ... 39 0.61
AL031709_6(AL031709|pid:none) Human DNA sequence from clone LA16... 39 0.61
AY088137_1(AY088137|pid:none) Arabidopsis thaliana clone 41648 m... 39 0.61
(Q6NRG0) RecName: Full=E3 ubiquitin-protein ligase RNF8 B; ... 39 0.61
(Q9H9P5) RecName: Full=RING finger protein unkempt-like; &AL031... 39 0.61
AK222154_1(AK222154|pid:none) Arabidopsis thaliana gene, similar... 39 0.61
AK080847_1(AK080847|pid:none) Mus musculus adult male corpora qu... 39 0.61
DQ086844_1(DQ086844|pid:none) Arabidopsis thaliana At3g23280 mRN... 39 0.61
AK016133_1(AK016133|pid:none) Mus musculus adult male testis cDN... 39 0.61
AY084466_1(AY084466|pid:none) Arabidopsis thaliana clone 108776 ... 39 0.61
EF125867_54(EF125867|pid:none) Maruca vitrata MNPV, complete gen... 39 0.61
AF303741_333(AF303741|pid:none) Chilo iridescent virus complete ... 39 0.80
AY809270_1(AY809270|pid:none) Schistosoma japonicum SJCHGC08697 ... 39 0.80
FN392322_165(FN392322|pid:none) Pichia pastoris GS115 chromosome... 39 0.80
DQ486030_37(DQ486030|pid:none) Antheraea pernyi nucleopolyhedrov... 39 0.80
(Q8VC56) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 39 0.80
DQ487701_1(DQ487701|pid:none) Arabidopsis thaliana clone 0000010... 39 0.80
AM430945_1(AM430945|pid:none) Vitis vinifera contig VV78X241223.... 39 0.80
AJ850299_1(AJ850299|pid:none) Zea mays m19 gene for putative MAD... 39 0.80
EF207986_82(EF207986|pid:none) Antheraea pernyi nucleopolyhedrov... 39 0.80
FJ882854_60(FJ882854|pid:none) Bombyx mandarina nucleopolyhedrov... 39 0.80
AM270358_20(AM270358|pid:none) Aspergillus niger contig An16c006... 39 0.80
BC123396_1(BC123396|pid:none) Bos taurus leucine rich repeat and... 39 0.80
DQ652799_1(DQ652799|pid:none) Arabidopsis thaliana clone 0000010... 39 0.80
AX104966_1(AX104966|pid:none) Sequence 11 from Patent WO0123568. 39 1.0
EU730893_102(EU730893|pid:none) Helicoverpa armigera multiple nu... 39 1.0
AC007202_20(AC007202|pid:none) Arabidopsis thaliana chromosome 1... 39 1.0
(O76064) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 39 1.0
BC159374_1(BC159374|pid:none) Xenopus tropicalis mex-3 homolog D... 39 1.0
AP004772_13(AP004772|pid:none) Oryza sativa Japonica Group genom... 39 1.0
AK298319_1(AK298319|pid:none) Homo sapiens cDNA FLJ50824 complet... 39 1.0
AM920457_1(AM920457|pid:none) Penicillium chrysogenum Wisconsin ... 39 1.0
CP001325_28(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 39 1.0
AY387483_11(AY387483|pid:none) Oryza sativa (japonica cultivar-g... 39 1.0
CT005266_189(CT005266|pid:none) Leishmania major strain Friedlin... 39 1.0
DQ646522_1(DQ646522|pid:none) Oryza sativa (japonica cultivar-gr... 39 1.0
AM502246_189(AM502246|pid:none) Leishmania infantum chromosome 28. 39 1.0
CU928169_370(CU928169|pid:none) Kluyveromyces thermotolerans str... 39 1.0
AM920439_312(AM920439|pid:none) Penicillium chrysogenum Wisconsi... 39 1.0
AF063866_242(AF063866|pid:none) Melanoplus sanguinipes entomopox... 39 1.0
DQ355836_1(DQ355836|pid:none) Paracentrotus lividus RING finger-... 39 1.0
AM920429_239(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 39 1.0
AX881817_1(AX881817|pid:none) Sequence 16722 from Patent EP10746... 39 1.0
BT054868_1(BT054868|pid:none) Zea mays full-length cDNA clone ZM... 39 1.0
AC118133_21(AC118133|pid:none) Oryza sativa chromosome 3 BAC OSJ... 38 1.4
BT087495_1(BT087495|pid:none) Zea mays full-length cDNA clone ZM... 38 1.4
AK317211_1(AK317211|pid:none) Arabidopsis thaliana AT5G14420 mRN... 38 1.4
(Q9LY87) RecName: Full=E3 ubiquitin-protein ligase RGLG2; ... 38 1.4
FN317626_1(FN317626|pid:none) Schistosoma japonicum isolate Anhu... 38 1.4
AP008216_1337(AP008216|pid:none) Oryza sativa (japonica cultivar... 38 1.4
FN357714_17(FN357714|pid:none) Schistosoma mansoni genome sequen... 38 1.4
AP005177_13(AP005177|pid:none) Oryza sativa Japonica Group genom... 38 1.4
EU976779_1(EU976779|pid:none) Zea mays clone 989988 unknown mRNA. 38 1.4
AB1731(AB1731) hypothetical protein lin2391 [imported] - Listeri... 38 1.4
EU814897_1(EU814897|pid:none) Tetrahymena thermophila Rnf2p (RNF... 38 1.4
AM443219_4(AM443219|pid:none) Vitis vinifera contig VV78X188051.... 38 1.4
AP008213_1048(AP008213|pid:none) Oryza sativa (japonica cultivar... 38 1.4
AB170198_1(AB170198|pid:none) Macaca fascicularis brain cDNA clo... 38 1.4
AM920436_34(AM920436|pid:none) Penicillium chrysogenum Wisconsin... 38 1.4
AC027036_21(AC027036|pid:none) Arabidopsis thaliana chromosome 1... 38 1.4
EU970283_1(EU970283|pid:none) Zea mays clone 343008 inhibitor of... 38 1.4
EF084758_1(EF084758|pid:none) Picea sitchensis clone WS0276_N21 ... 38 1.4
AY850181_1(AY850181|pid:none) Eschscholzia californica AGL2 mRNA... 38 1.8
BT088008_1(BT088008|pid:none) Zea mays full-length cDNA clone ZM... 38 1.8
AM270218_69(AM270218|pid:none) Aspergillus niger contig An11c001... 38 1.8
BT035040_1(BT035040|pid:none) Zea mays full-length cDNA clone ZM... 38 1.8
AM423067_1(AM423067|pid:none) Tribolium castaneum mRNA for KH do... 38 1.8
AM475322_2(AM475322|pid:none) Vitis vinifera contig VV78X237798.... 38 1.8
AP004026_7(AP004026|pid:none) Oryza sativa Japonica Group genomi... 38 1.8
AM778931_30(AM778931|pid:none) Microcystis aeruginosa PCC 7806 g... 38 1.8
DQ069803_1(DQ069803|pid:none) Arabidopsis thaliana hypothetical ... 38 1.8
EU965348_1(EU965348|pid:none) Zea mays clone 285478 copine famil... 38 1.8
AC158501_14(AC158501|pid:none) Medicago truncatula chromosome 2 ... 38 1.8
EU309041_43(EU309041|pid:none) Orgyia leucostigma NPV isolate CF... 38 1.8
AM270219_6(AM270219|pid:none) Aspergillus niger contig An11c0020... 38 1.8
BT022512_1(BT022512|pid:none) Drosophila melanogaster IP11818 fu... 38 1.8
AM494965_200(AM494965|pid:none) Leishmania braziliensis chromoso... 38 1.8
AY084453_1(AY084453|pid:none) Arabidopsis thaliana clone 108568 ... 38 1.8
AP008971_958(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 37 2.3
AP005518_5(AP005518|pid:none) Oryza sativa Japonica Group genomi... 37 2.3
AK091610_1(AK091610|pid:none) Homo sapiens cDNA FLJ34291 fis, cl... 37 2.3
AC007767_31(AC007767|pid:none) Sequence of BAC F5D14 from Arabid... 37 2.3
AL691432_4(AL691432|pid:none) Human DNA sequence from clone RP11... 37 2.3
AM393613_1(AM393613|pid:none) Synthetic construct Homo sapiens c... 37 2.3
AL691432_2(AL691432|pid:none) Human DNA sequence from clone RP11... 37 2.3
AK095914_1(AK095914|pid:none) Homo sapiens cDNA FLJ38595 fis, cl... 37 2.3
AY090954_1(AY090954|pid:none) Arabidopsis thaliana unknown prote... 37 2.3
AJ271919_1(AJ271919|pid:none) Mus musculus partial neurl gene, e... 37 2.3
AB025631_16(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 37 2.3
AK122751_1(AK122751|pid:none) Homo sapiens cDNA FLJ16279 fis, cl... 37 2.3
CP001323_354(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 37 2.3
AY775334_1(AY775334|pid:none) Capsicum annuum RING-finger protei... 37 2.3
BC168076_1(BC168076|pid:none) Xenopus tropicalis cDNA clone MGC:... 37 2.3
(Q923S6) RecName: Full=Neuralized-like protein 1; Short... 37 2.3
AB076693_1(AB076693|pid:none) Homo sapiens mRNA for skeletrophin... 37 2.3
AJ972477_1(AJ972477|pid:none) Medicago truncatula ZFP gene for C... 37 2.3
AL834527_1(AL834527|pid:none) Homo sapiens mRNA; cDNA DKFZp434A0... 37 2.3
AB074480_1(AB074480|pid:none) Homo sapiens mRNA for skeletrophin... 37 2.3

>(Q7M3S9) RecName: Full=RING finger protein B; Short=Protein
rngB;
Length = 943

Score = 269 bits (688), Expect = 3e-70
Identities = 133/147 (90%), Positives = 133/147 (90%)
Frame = +2

Query: 1763 NINRLXXXXXXXXXXXXXXFYFESKIQELSNQLKEKQQAITDRDNKIKDFENQLNKYKLI 1942
NINRL FYFESKIQELSNQLKEKQQAITDRDNKIKDFENQLNKYKLI
Sbjct: 786 NINRLSISSNSSTLSSKDSFYFESKIQELSNQLKEKQQAITDRDNKIKDFENQLNKYKLI 845

Query: 1943 GLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPP 2122
GLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPP
Sbjct: 846 GLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPP 905

Query: 2123 NIVLLPCRHSSLCSDCCSKLTKCPICR 2203
NIVLLPCRHSSLCSDCCSKLTKCPICR
Sbjct: 906 NIVLLPCRHSSLCSDCCSKLTKCPICR 932

Score = 167 bits (424), Expect = 1e-39
Identities = 87/105 (82%), Positives = 87/105 (82%)
Frame = +3

Query: 1194 PPFNGRXXXXXXXXXXXXXXXXXXQQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLK 1373
PPFNGR QQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLK
Sbjct: 530 PPFNGRSSNHNNNNNSNSNNYNNHQQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLK 589

Query: 1374 RVEELFNQKIKHEQKYRQSLEEKLGKANHQVSLLTNQIQSIIQKD 1508
RVEELFNQKIKHEQKYRQSLEEKLGKANHQVSLLTNQIQSIIQKD
Sbjct: 590 RVEELFNQKIKHEQKYRQSLEEKLGKANHQVSLLTNQIQSIIQKD 634

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,573,040,611
Number of extensions: 20501511
Number of successful extensions: 62153
Number of sequences better than 10.0: 605
Number of HSP's gapped: 61997
Number of HSP's successfully gapped: 639
Length of query: 739
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 603
Effective length of database: 611,008,840
Effective search space: 368438330520
Effective search space used: 368438330520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.58 gvh: 0.14 alm: 0.41 top: 0.53 tms: 0.00 mit: 0.29 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 1.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
36.0 %: cytoplasmic
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: plasma membrane

>> prediction for Contig-U15517-1 is nuc

VS (DIR, S) 7
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 2
SS (DIR, S) 6
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 2
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0