Contig-U15517-1 |
Contig ID |
Contig-U15517-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
gap included |
Contig length |
2207 |
Chromosome number (1..6, M) |
1 |
Chromosome length |
4919822 |
Start point |
2261073 |
End point |
2263038 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
20 |
Number of EST |
24 |
Link to clone list |
U15517 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 1.30 |
Homology vs DNA |
Query= Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Contig-U15517-1Q.Seq.d (2217 letters)
Database: ddbj_B 98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ342675) Dictyostelium discoideum cDNA clone:dda1h06, 3' e... 496 0.0 3 (AU271196) Dictyostelium discoideum vegetative cDNA clone:VS... 444 0.0 3 (BJ345061) Dictyostelium discoideum cDNA clone:dda21p10, 3' ... 410 0.0 5 (AU271197) Dictyostelium discoideum vegetative cDNA clone:VS... 442 e-180 3 (BJ325707) Dictyostelium discoideum cDNA clone:dda1h06, 5' e... 492 e-165 2 (AU261435) Dictyostelium discoideum vegetative cDNA clone:VS... 264 e-136 2 (BJ327711) Dictyostelium discoideum cDNA clone:dda21p10, 5' ... 196 e-121 3 (AU074520) Dictyostelium discoideum slug cDNA, clone SSL194. 319 2e-83 2 (AU263570) Dictyostelium discoideum vegetative cDNA clone:VS... 250 2e-61 1 (AU263571) Dictyostelium discoideum vegetative cDNA clone:VS... 248 8e-61 1 (BJ407763) Dictyostelium discoideum cDNA clone:dds43f16, 3' ... 220 2e-52 1 (AU071607) Dictyostelium discoideum slug cDNA, clone SSB883. 188 6e-43 1 (AU053063) Dictyostelium discoideum slug cDNA, clone SLF608. 96 7e-15 1 (C89873) Dictyostelium discoideum slug cDNA, clone SSG561. 96 7e-15 1 (AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 42 2e-05 10 (AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 3e-05 11 (AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 42 2e-04 8 (AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 5e-04 7 (AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 38 0.002 9 (AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 0.004 12 (AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 40 0.004 7 (AY160100) Dictyostelium discoideum nucleotide exchange fact... 38 0.006 6 (AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 40 0.007 9 (AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 34 0.007 10 (AY232269) Dictyostelium discoideum putative protein Roco7 (... 42 0.007 6 (AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 36 0.009 10 (AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 36 0.012 10 (AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 0.014 13 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 46 0.016 5 (AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 54 0.023 1 (DE214811) Trifolium pratense DNA, clone:RCG03375. 32 0.023 4 (AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 38 0.024 11 (AC118819) Rattus norvegicus clone CH230-447C24, WORKING DRA... 44 0.024 6 (FM078339) Rattus norvegicus EST, 5'-end sequence, clone etn... 46 0.037 2 (BJ381729) Dictyostelium discoideum cDNA clone:ddc42p08, 3' ... 38 0.052 4 (AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 40 0.062 14 (AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.064 14 (EY367588) CAXA11338.fwd CAXA Helobdella robusta Subtracted ... 52 0.092 1 (AC116551) Dictyostelium discoideum chromosome 2 map complem... 42 0.094 14 (AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 38 0.11 7 (AR549429) Sequence 4560 from patent US 6747137. 46 0.12 2 (U67716) Dictyostelium discoideum myosin I heavy chain kinas... 34 0.14 5 (AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.16 11 (AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.16 13 (Y10158) D.discoideum mRNA for STE20/pak kinase homologue. 34 0.16 5 (AY232271) Dictyostelium discoideum putative protein Roco9 (... 42 0.18 4 (EY331562) CAWY4258.fwd CAWY Helobdella robusta Subtracted E... 44 0.18 2 (AF362373) Dictyostelium discoideum histidine kinase DhkL (d... 34 0.18 5 (DL131077) Bax-responsive genes for drug target identificati... 46 0.19 2 (AX536864) Sequence 465 from Patent WO02064766. 46 0.19 2 (AR941637) Sequence 465 from patent US 7101990. 46 0.19 2 (AF474377) Dictyostelium discoideum Ras GTP exchange factor ... 38 0.19 4 (BJ386300) Dictyostelium discoideum cDNA clone:ddc57c23, 3' ... 38 0.20 3 (EY337093) CAWY8102.fwd CAWY Helobdella robusta Subtracted E... 44 0.21 2 (DU672233) Bst004775 lambda03 Boechera stricta genomic clone... 46 0.22 2 (AP007985) Lotus japonicus genomic DNA, chromosome 4, clone:... 38 0.27 7 (AC117080) Dictyostelium discoideum chromosome 2 map complem... 36 0.27 11 (EC372361) G840P33FB2.T0 Oscarella carmela pSport1 Library I... 36 0.27 2 (AF102575) Dictyostelium discoideum cell surface protein DTF... 34 0.36 5 (CU972496) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.36 6 (BV693764) CqfSI_AAC48 Cronartium nuclear microsatellite seq... 50 0.36 1 (BB971286) Plasmodium berghei str. ANKA cDNA clone: OK000950... 50 0.36 1 (FG067339) dlbw0_004683 cDNA library of cambium of Betula pl... 50 0.36 1 (BJ331518) Dictyostelium discoideum cDNA clone:dda35p17, 5' ... 34 0.47 3 (BJ423497) Dictyostelium discoideum cDNA clone:ddv49l09, 5' ... 34 0.47 3 (BJ391097) Dictyostelium discoideum cDNA clone:dds15f03, 5' ... 42 0.50 2 (AC117082) Dictyostelium discoideum chromosome 2 map complem... 40 0.50 6 (BJ348298) Dictyostelium discoideum cDNA clone:dda32e21, 3' ... 40 0.50 2 (BJ354923) Dictyostelium discoideum cDNA clone:dda55m06, 3' ... 40 0.51 3 (BJ345473) Dictyostelium discoideum cDNA clone:dda23e24, 3' ... 40 0.52 2 (BJ356777) Dictyostelium discoideum cDNA clone:dda61l08, 3' ... 40 0.53 2 (BJ381684) Dictyostelium discoideum cDNA clone:ddc42g11, 3' ... 40 0.53 2 (AC169501) Mus musculus BAC clone RP24-445O18 from chromosom... 40 0.55 5 (AU060258) Dictyostelium discoideum slug cDNA, clone SLA749. 42 0.55 2 (BJ361243) Dictyostelium discoideum cDNA clone:ddc16k11, 5' ... 42 0.58 2 (AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 32 0.59 12 (BJ336454) Dictyostelium discoideum cDNA clone:dda53p22, 5' ... 38 0.61 2 (BJ441374) Dictyostelium discoideum cDNA clone:ddv46c16, 3' ... 40 0.64 2 (BJ380974) Dictyostelium discoideum cDNA clone:ddc39n20, 3' ... 40 0.65 2 (BJ405229) Dictyostelium discoideum cDNA clone:dds31b04, 3' ... 30 0.70 4 (AY484461) Dictyostelium discoideum kinesin family member 6 ... 38 0.75 4 (AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 38 0.75 9 (AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 38 0.87 9 (DY891081) CeleSEQ7613 Cunninghamella elegans pBluescript (E... 36 0.92 3 (BJ374167) Dictyostelium discoideum cDNA clone:ddc6g21, 3' e... 38 0.96 3 (CR962134) Medicago truncatula chromosome 5 clone mte1-40n1,... 40 0.99 10 (BJ342098) Dictyostelium discoideum cDNA clone:dda9c13, 3' e... 38 1.0 3 (DY890091) CeleSEQ7142 Cunninghamella elegans pBluescript (E... 34 1.0 2 (Z98551) Plasmodium falciparum MAL3P6. 32 1.0 10 (AX647437) Sequence 1629 from Patent EP1270724. 32 1.1 4 (BQ357278) RC6-HT0678-290600-013-G06 HT0678 Homo sapiens cDN... 38 1.1 2 (FP015760) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.2 5 (BJ382053) Dictyostelium discoideum cDNA clone:ddc43b20, 3' ... 38 1.2 3 (AC116919) Dictyostelium discoideum chromosome 2 map complem... 40 1.2 7 (AZ145580) SP_0021_B1_G11_T7 Strongylocentrotus purpuratus, ... 32 1.2 4 (AU061709) Dictyostelium discoideum slug cDNA, clone SLF512. 46 1.3 2 (BJ390860) Dictyostelium discoideum cDNA clone:dds14b03, 5' ... 46 1.3 2 (AC068457) Homo sapiens chromosome 11, clone RP11-582N4, com... 40 1.3 3 (BJ328605) Dictyostelium discoideum cDNA clone:dda28f22, 5' ... 46 1.3 2 (BF833522) CM4-HT0920-281000-387-d02 HT0920 Homo sapiens cDN... 38 1.4 2 (AB030033) Dictyostelium discoideum gene for AmiB, complete ... 34 1.4 4 (BJ381660) Dictyostelium discoideum cDNA clone:ddc42b12, 3' ... 36 1.4 3 (AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 38 1.4 10 (AF090533) Dictyostelium discoideum unconventional myosin he... 34 1.4 5 (AY128834) Arabidopsis thaliana putative fizzy-related prote... 48 1.4 1 (AY099585) Arabidopsis thaliana putative fizzy-related prote... 48 1.4 1 (AL161558) Arabidopsis thaliana DNA chromosome 4, contig fra... 48 1.4 1 (AL031018) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 48 1.4 1 (FB583011) Sequence 801 from Patent WO2006081029. 48 1.4 1 (CQ891359) Sequence 1 from Patent WO2004087929. 48 1.4 1 (AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 48 1.4 1 (AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 48 1.4 1 (AQ742476) HS_5383_B1_C12_T7A RPCI-11 Human Male BAC Library... 48 1.4 1 (FH668078) CHO_OF5021xj05f1.ab1 CHO_OF5 Nicotiana tabacum ge... 48 1.4 1 (ET822702) CHO_OF764xg09r1.ab1 CHO_OF Nicotiana tabacum geno... 48 1.4 1 (EK051097) 1092959702691 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1 (EK009168) 1092955144766 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1 (EJ645881) 1091120967792 Global-Ocean-Sampling_GS-30-01-01-1... 48 1.4 1 (EJ645598) 1091120724528 Global-Ocean-Sampling_GS-30-01-01-1... 48 1.4 1 (DE952261) Macropus eugenii DNA, BAC clone: MEB1-150L06_R, 3... 48 1.4 1 (DB630340) Halocynthia roretzi cDNA clone:man32g14, 5' end. 48 1.4 1 (CD577778) 21_H01_21_013 ESTs from wild-caught Anopheles fun... 48 1.4 1 (CD577777) 47(2)w-3_03_C09_067 ESTs from wild-caught Anophel... 48 1.4 1 (CB264487) 57-E015023-035-004-B15-T7R MPIZ-ADIS-035 Arabidop... 48 1.4 1 (BX837553) Arabidopsis thaliana Full-length cDNA 5PRIM end o... 48 1.4 1 (BJ388332) Dictyostelium discoideum cDNA clone:dds9c05, 5' e... 48 1.4 1 (BJ329058) Dictyostelium discoideum cDNA clone:dda30i15, 5' ... 48 1.4 1 (EY295753) CAWX12425.rev CAWX Helobdella robusta Primary Ear... 48 1.4 1 (AV830129) Arabidopsis thaliana cDNA clone:RAFL09-63-A14, 5'... 48 1.4 1 (AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI... 38 1.5 7 (C91436) Dictyostelium discoideum slug cDNA, clone SSK247. 38 1.5 3 (BJ352566) Dictyostelium discoideum cDNA clone:dda47m04, 3' ... 38 1.6 3 (BJ363151) Dictyostelium discoideum cDNA clone:ddc25h11, 5' ... 42 1.6 2 (FE232126) CAPG1586.fwd CAPG Naegleria gruberi amoeba stage ... 32 1.6 4 (AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 36 1.6 9 (BJ360144) Dictyostelium discoideum cDNA clone:ddc4g13, 5' e... 42 1.7 2 (BJ361382) Dictyostelium discoideum cDNA clone:ddc16o23, 5' ... 46 1.7 2 (BJ388696) Dictyostelium discoideum cDNA clone:dds6f23, 5' e... 42 1.8 2 (BJ363974) Dictyostelium discoideum cDNA clone:ddc29i11, 5' ... 46 1.8 2 (BJ353659) Dictyostelium discoideum cDNA clone:dda51c03, 3' ... 38 1.8 3 (BJ323960) Dictyostelium discoideum cDNA clone:dda4h01, 5' e... 42 1.8 2 (U23477) Dictyostelium discoideum phosphatidylinositol-4,5-d... 42 1.9 3 (BJ324054) Dictyostelium discoideum cDNA clone:dda4d15, 5' e... 42 1.9 2 (BJ326243) Dictyostelium discoideum cDNA clone:dda15o20, 5' ... 42 1.9 2 (BJ347885) Dictyostelium discoideum cDNA clone:dda31b15, 3' ... 38 1.9 3 (BJ324118) Dictyostelium discoideum cDNA clone:dda4j24, 5' e... 42 1.9 2 (BJ347860) Dictyostelium discoideum cDNA clone:dda31m07, 3' ... 38 1.9 3 (BJ325695) Dictyostelium discoideum cDNA clone:dda1d03, 5' e... 42 1.9 2 (BJ386802) Dictyostelium discoideum cDNA clone:dds10c19, 5' ... 42 2.0 2 (BJ420622) Dictyostelium discoideum cDNA clone:ddv39k24, 5' ... 42 2.0 2 (BJ337776) Dictyostelium discoideum cDNA clone:dda58n15, 5' ... 42 2.0 2 (AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 34 2.0 12 (X89263) C.albicans DNA for MNT2 gene. 40 2.0 3 (BJ418952) Dictyostelium discoideum cDNA clone:ddv34g16, 5' ... 42 2.0 2 (AJ969073) Spiroplasma citri pSci5 plasmid. 34 2.0 4 (BJ323890) Dictyostelium discoideum cDNA clone:dda12b19, 5' ... 46 2.0 2 (BJ352994) Dictyostelium discoideum cDNA clone:dda48j17, 3' ... 40 2.0 2 (BJ337289) Dictyostelium discoideum cDNA clone:dda56l24, 5' ... 46 2.0 2 (BJ325460) Dictyostelium discoideum cDNA clone:dda14j15, 5' ... 42 2.0 2 (BJ360477) Dictyostelium discoideum cDNA clone:ddc6e10, 5' e... 46 2.1 2 (BJ327264) Dictyostelium discoideum cDNA clone:dda19f21, 5' ... 42 2.1 2 (BJ326452) Dictyostelium discoideum cDNA clone:dda16e13, 5' ... 42 2.1 2 (BJ388243) Dictyostelium discoideum cDNA clone:dds8i17, 5' e... 42 2.1 2 (BJ350659) Dictyostelium discoideum cDNA clone:dda40i17, 3' ... 38 2.1 3 (BJ389575) Dictyostelium discoideum cDNA clone:dds19c11, 5' ... 42 2.1 2 (BJ412400) Dictyostelium discoideum cDNA clone:ddv8e12, 5' e... 42 2.1 2 (EI720267) 2B421014M12TF BAC library from breast tumor sampl... 32 2.2 3 (BJ325958) Dictyostelium discoideum cDNA clone:dda3m02, 5' e... 42 2.2 2 (AU060701) Dictyostelium discoideum slug cDNA, clone SLB164. 46 2.3 2 (BJ355045) Dictyostelium discoideum cDNA clone:dda55g15, 3' ... 36 2.3 3 (AU060932) Dictyostelium discoideum slug cDNA, clone SLC289. 42 2.3 2 (EH011282) USDA-FP_184297 Lysiphlebus testaceipes adult whol... 36 2.3 2 (BJ380668) Dictyostelium discoideum cDNA clone:ddc38m20, 3' ... 38 2.3 3 (FB571381) Sequence 248 from Patent EP1865317. 32 2.4 10 (AB017910) Dictyostelium discoideum myoM gene, complete cds. 34 2.4 5 (AF045453) Dictyostelium discoideum protein kinase YakA (yak... 34 2.4 4 (CN807694) HDAH01E09.F Leech Haementeria depressa library HD... 40 2.4 2 (BJ352114) Dictyostelium discoideum cDNA clone:dda45n13, 3' ... 38 2.4 3 (FE261861) CAZO2260.fwd CAZO Naegleria gruberi Flagellate St... 34 2.5 3 (BJ354590) Dictyostelium discoideum cDNA clone:dda54j04, 3' ... 38 2.5 3 (AC180768) Strongylocentrotus purpuratus clone R3-3022O11, W... 36 2.5 9 (EH011939) USDA-FP_184888 Lysiphlebus testaceipes adult whol... 36 2.5 2 (AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 44 2.6 6 (BJ444802) Dictyostelium discoideum cDNA clone:ddv57b15, 3' ... 34 2.6 4 (DY891073) CeleSEQ7600 Cunninghamella elegans pBluescript (E... 34 2.7 3 (AC190077) Aotus nancymaae clone CH258-356L6, WORKING DRAFT ... 34 2.8 2 (AC150020) Papio anubis clone RP41-380L14, WORKING DRAFT SEQ... 34 2.8 2 (BS000080) Pan troglodytes chromosome 22 clone:PTB-090L14, m... 36 2.8 2 (EJ031306) 1095454047883 Global-Ocean-Sampling_GS-26-01-01-1... 36 2.8 3 (AC171339) Macaca mulatta clone CH250-370E11, WORKING DRAFT ... 34 2.8 2 (AC149866) Papio anubis clone RP41-475C15, WORKING DRAFT SEQ... 34 2.8 2 (AF093689) Dictyostelium discoideum MEK kinase alpha (mkkA) ... 34 2.9 4 (ES394264) MUS08-P22.x1d-t SHGC-MUS Mytilus californianus cD... 38 2.9 2 (AM650249) Entamoeba moshkovskii FIC GSS, clone mosh074a01.p1k. 36 2.9 3 (AJ412894) Homo sapiens partial STAT5B gene for signal trans... 38 3.0 2 (EJ034001) 1095454063576 Global-Ocean-Sampling_GS-26-01-01-1... 42 3.0 2 (DY886238) CeleSEQ1808 Cunninghamella elegans pBluescript (E... 38 3.1 2 (AU074254) Dictyostelium discoideum slug cDNA, clone SSK153. 42 3.1 2 (AL440262) T7 end of clone BD0AA011B06 of library BD0AA from... 40 3.3 3 (BM884033) rc18f01.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 38 3.6 3 (CR382399) Plasmodium falciparum chromosome 6, complete sequ... 40 3.6 15 (AB265412) Comibaena amoenaria gene for 16S rRNA, partial se... 38 3.6 3 (AC095499) Rattus norvegicus clone CH230-7P10, WORKING DRAFT... 42 3.8 10 (AU037918) Dictyostelium discoideum slug cDNA, clone SSE453. 34 3.8 2 (AU053608) Dictyostelium discoideum slug cDNA, clone SLJ223. 34 3.9 2 (AZ925268) 4910.ez32n10.s1 Saccharomyces paradoxus N17 Sacch... 32 3.9 2 (AF057019) Dictyostelium discoideum interaptin (abpD) gene, ... 36 3.9 4 (BM883881) rc23h07.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 38 4.3 3 (BM883901) rc24b03.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 38 4.4 3 (BH272219) CH230-21L22.TV CHORI-230 Segment 1 Rattus norvegi... 36 4.6 2 (AR554574) Sequence 9705 from patent US 6747137. 40 4.9 2 (DL131179) Bax-responsive genes for drug target identificati... 38 4.9 4 (AX537068) Sequence 669 from Patent WO02064766. 38 4.9 4 (AR941739) Sequence 669 from patent US 7101990. 38 4.9 4 (CR013347) Forward strand read from insert in 5'HPRT inserti... 32 4.9 4 (BZ229998) CH230-353C24.TV CHORI-230 Segment 2 Rattus norveg... 32 5.1 3 (AJ010592) Guillardia theta DNA for complete sequence of nuc... 36 5.2 10 (BJ326589) Dictyostelium discoideum cDNA clone:dda17i04, 5' ... 32 5.3 3 (AY753021) Penaeus monodon clone t2107 microsatellite sequence. 34 5.4 3 (BJ345710) Dictyostelium discoideum cDNA clone:dda28g14, 3' ... 40 5.4 2 (BX901893) Zebrafish DNA sequence from clone CH211-72G23 in ... 46 5.7 1 (AL805920) Mouse DNA sequence from clone RP23-162M7 on chrom... 46 5.7 1 (AC154690) Mus musculus BAC clone RP24-331B7 from chromosome... 46 5.7 1 (AC154305) Mus musculus BAC clone RP24-492C11 from chromosom... 46 5.7 1 (BT014011) Lycopersicon esculentum clone 133072F, mRNA seque... 46 5.7 1 (AY448010) Ipomoea trifida haplotype S1 self-incompatibility... 46 5.7 1 (AY351702) Ipomoea trifida glycosyltransferase 10 mRNA, comp... 46 5.7 1 (AY351700) Ipomoea trifida glycosyltransferase 1 mRNA, compl... 46 5.7 1 (AP008216) Oryza sativa (japonica cultivar-group) genomic DN... 46 5.7 1 (AM452889) Vitis vinifera contig VV78X021186.3, whole genome... 46 5.7 1 (AK106877) Oryza sativa Japonica Group cDNA clone:002-118-E0... 46 5.7 1 (AC105377) Oryza sativa chromosome 10 BAC OSJNBa0034E15 geno... 46 5.7 1 (AB263749) Ipomoea trifida DNA, self-incompatibility (S-) lo... 46 5.7 1 (AB263748) Ipomoea trifida DNA, self-incompatibility (S-) lo... 46 5.7 1 (EA701988) Sequence 80867 from patent US 7365185. 46 5.7 1 (DD209227) test. 46 5.7 1 (CS374553) Sequence 656 from Patent WO2006034879. 46 5.7 1 (AX826064) Sequence 316 from Patent WO03072821. 46 5.7 1 (AX822424) Sequence 316 from Patent EP1340818. 46 5.7 1 (AX250461) Sequence 67 from Patent WO0168863. 46 5.7 1 (AY263399) Dictyostelium discoideum strain Ax2 sombrero SmbA... 46 5.7 1 (AF388659) Apis mellifera 1D-myo-inositol-trisphosphate 3-ki... 46 5.7 1 (AF362376) Dictyostelium discoideum histidine kinase DhkK (d... 46 5.7 1 (AF088979) Dictyostelium discoideum beige protein homolog (l... 46 5.7 1 (AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 5.7 1 (AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 46 5.7 1 (AL589842) Human DNA sequence from clone RP11-268A15 on chro... 46 5.7 1 (AC128804) Rattus norvegicus clone CH230-144F16, *** SEQUENC... 46 5.7 1 (FP015885) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.7 1 (AC092742) Mus musculus strain C57BL6/J clone RP23-158O21, W... 46 5.7 1 (CU487214) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.7 1 (CU463139) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.7 1 (BX000982) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 46 5.7 1 (AC226438) Zea mays chromosome UNKNOWN clone CH201-484P16; Z... 46 5.7 1 (AC223465) Bos taurus clone CH240-469A15, WORKING DRAFT SEQU... 46 5.7 1 (AC186209) Canis familiaris chromosome 12 clone XX-260N1 map... 46 5.7 1 (AC164959) Bos taurus clone CH240-163E23, WORKING DRAFT SEQU... 46 5.7 1 (EI270550) OR__Ba0080E17.f OR__Ba Oryza rufipogon genomic cl... 46 5.7 1 (CL860316) OR_CBa0091O03.f OR_CBa Oryza rufipogon genomic cl... 46 5.7 1 (CL852456) OR_CBa0081F09.r OR_CBa Oryza rufipogon genomic cl... 46 5.7 1 (CL755712) OR_BBa0123I20.r OR_BBa Oryza nivara genomic clone... 46 5.7 1 (CL752532) OR_BBa0119F06.f OR_BBa Oryza nivara genomic clone... 46 5.7 1 (CL749600) OR_BBa0115G22.f OR_BBa Oryza nivara genomic clone... 46 5.7 1 (CL617957) OR_BBa0011D04.r OR_BBa Oryza nivara genomic clone... 46 5.7 1 (CL529232) HIV64C10.fwd HIV-vector integration sites in huma... 46 5.7 1 (AG365872) Mus musculus molossinus DNA, clone:MSMg01-168M20.... 46 5.7 1 (ES221666) MpGV_ag4_E17 Myzus persicae, line G006, PLRV infe... 46 5.7 1 (EL539308) EST_omor_rgc_3261 omorrgc mixed_tissue Osmerus mo... 46 5.7 1 (DY893227) CeleSEQ12504 Cunninghamella elegans pBluescript (... 46 5.7 1 (DV159573) KP1B.037M22F.050623T7 KP1B Nicotiana tabacum cDNA... 46 5.7 1 (DT746898) EST1180747 Aquilegia cDNA library Aquilegia formo... 46 5.7 1 (DB693312) Solanum lycopersicum cDNA, clone: LEFL1048AB02, 5... 46 5.7 1 (DB680359) Solanum lycopersicum cDNA, clone: LEFL1007AD11, 5... 46 5.7 1 (CI455062) Oryza sativa Japonica Group cDNA, clone: J07B5031... 46 5.7 1 (CI428149) Oryza sativa Japonica Group cDNA, clone: J06B5126... 46 5.7 1 (CI097693) Oryza sativa Japonica Group cDNA, clone: 019-M080... 46 5.7 1 (CF542859) S014678w-024-030-O16-SP6 MPIZ-ADIS-024-leaf Beta ... 46 5.7 1 (C90192) Dictyostelium discoideum slug cDNA, clone SSI233. 46 5.7 1 (C84181) Dictyostelium discoideum slug cDNA, clone SSC448. 46 5.7 1 (AI773070) EST254170 tomato resistant, Cornell Solanum lycop... 46 5.7 1 (BQ588023) E012338-024-009-H05-SP6 MPIZ-ADIS-024-leaf Beta v... 46 5.7 1 (AF053559) AF053559 Common ice plant root, 6 hour salt stres... 46 5.7 1 (BP130616) Nicotiana tabacum cDNA, clone: BY2605, primer: M1... 46 5.7 1 (BJ395848) Dictyostelium discoideum cDNA clone:dds40l11, 5' ... 46 5.7 1 (BJ392814) Dictyostelium discoideum cDNA clone:dds29e02, 5' ... 46 5.7 1 (BJ386235) Dictyostelium discoideum cDNA clone:ddc57f18, 3' ... 46 5.7 1 (BJ371333) Dictyostelium discoideum cDNA clone:ddc57f18, 5' ... 46 5.7 1 (BJ336344) Dictyostelium discoideum cDNA clone:dda53g15, 5' ... 46 5.7 1 (BJ336118) Dictyostelium discoideum cDNA clone:dda52f20, 5' ... 46 5.7 1 (BI932800) EST552689 tomato flower, 8 mm to preanthesis buds... 46 5.7 1 (BI506154) BB170019B20E05.5 Bee Brain Normalized/Subtracted ... 46 5.7 1 (EY345978) CAWZ14405.fwd CAWZ Helobdella robusta Primary Lat... 46 5.7 1 (EY330973) CAWY3857.fwd CAWY Helobdella robusta Subtracted E... 46 5.7 1 (CP001080) Sulfurihydrogenibium sp. YO3AOP1, complete genome. 46 5.7 1 (CP000806) Cyanothece sp. ATCC 51142 circular chromosome, co... 46 5.7 1 (BJ362163) Dictyostelium discoideum cDNA clone:ddc20f15, 5' ... 36 5.9 2 (AC019287) Homo sapiens chromosome 15 clone RP11-51A16 map 1... 40 5.9 4 (BH148119) ENTPV80TF Entamoeba histolytica Sheared DNA Entam... 32 5.9 4 (GE593620) CCPW2284.b1_H20.ab1 CCP(UWX) Globe Artichoke Cyna... 38 6.0 3 (AZ211711) SP_0157_B2_C02_T7A Strongylocentrotus purpuratus,... 32 6.0 4 (BJ422357) Dictyostelium discoideum cDNA clone:ddv45l18, 5' ... 34 6.1 3 (BJ364442) Dictyostelium discoideum cDNA clone:ddc31a20, 5' ... 34 6.1 3 (BJ330057) Dictyostelium discoideum cDNA clone:dda27a12, 5' ... 44 6.2 2 (FM140961) Rattus norvegicus EST, 5'-end sequence, clone etn... 32 6.2 3 (AU284657) Dictyostelium discoideum gamete cDNA clone:FC-BG0... 36 6.4 3 (EI724921) 2B421021J02TF BAC library from breast tumor sampl... 34 6.4 3 (CR239282) Forward strand read from insert in 5'HPRT inserti... 32 6.4 4 (EH012673) USDA-FP_185550 Lysiphlebus testaceipes adult whol... 32 6.4 3 (U66525) Dictyostelium discoideum ORFveg114 mRNA, complete cds. 36 6.4 4 (BJ325871) Dictyostelium discoideum cDNA clone:dda2p18, 5' e... 34 6.5 3 (EL929082) EST0706 ARS-CICGRU ONmgEST Ostrinia nubilalis cDN... 44 6.7 2 (EL929778) EST1407 ARS-CICGRU ONmgEST Ostrinia nubilalis cDN... 44 6.7 2 (BJ367441) Dictyostelium discoideum cDNA clone:ddc42b21, 5' ... 38 6.9 2 (EB560567) AGENCOURT_51360609 D. virilis EST Drosophila viri... 38 7.0 2 (DH481089) Monosiga ovata DNA, fosmid clone: MOF-034G08, gen... 36 7.2 2 (BJ417991) Dictyostelium discoideum cDNA clone:ddv31d10, 5' ... 36 7.2 2 (EL929665) EST1292 ARS-CICGRU ONmgEST Ostrinia nubilalis cDN... 44 7.4 2 (BJ401382) Dictyostelium discoideum cDNA clone:dds23g01, 3' ... 30 7.4 3 (BJ437525) Dictyostelium discoideum cDNA clone:ddv34e14, 3' ... 36 7.5 3 (EH016250) USDA-FP_188770 Lysiphlebus testaceipes adult whol... 40 7.5 2 (BX323879) Zebrafish DNA sequence from clone DKEY-30L21 in l... 42 7.7 8 (AC174347) Medicago truncatula chromosome 8 clone mth2-173b1... 34 7.7 7 (FE231999) CAPG1518.rev CAPG Naegleria gruberi amoeba stage ... 40 7.8 2 (AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 7.9 13 (BJ415213) Dictyostelium discoideum cDNA clone:ddv21g21, 5' ... 36 7.9 2 (EX163707) LY_YIT_DP1830 Dermatophagoides pteronyssinus cDNA... 38 8.0 2 (FE236533) CAPG3936.rev CAPG Naegleria gruberi amoeba stage ... 40 8.0 2 (AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 8.0 10 (BI266006) NF097H12IN1F1104 Insect herbivory Medicago trunca... 36 8.1 2 (FH318385) CHO_OF4493xc07f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 8.1 3 (FE267064) CAZO5886.rev CAZO Naegleria gruberi Flagellate St... 40 8.3 2 (FE245106) CAPG8621.rev CAPG Naegleria gruberi amoeba stage ... 40 8.4 2 (EB569389) AGENCOURT_51782348 D. virilis EST Drosophila viri... 38 8.4 2 (DX933686) MUGQ_CH252P088F02Sp6_CP106_011 CHORI-252 Vervet M... 30 8.6 4 (AF361947) Dictyostelium discoideum SgcA (sgcA) mRNA, comple... 34 8.6 6 (DB997969) Quercus mongolica subsp. crispula mRNA, clone: Qm... 42 8.7 2 (BX176560) Danio rerio genomic clone DKEY-179K7, genomic sur... 38 8.8 2 (BJ344646) Dictyostelium discoideum cDNA clone:dda20c05, 3' ... 30 8.8 4 (U38197) Dictyostelium discoideum protein tyrosine phosphata... 38 8.8 2 (EB574093) AGENCOURT_51107697 D. virilis EST Drosophila viri... 38 9.0 2 (EB573904) AGENCOURT_51103962 D. virilis EST Drosophila viri... 38 9.0 2 (EB566128) AGENCOURT_51103866 D. virilis EST Drosophila viri... 38 9.0 2 (EB564950) AGENCOURT_51118374 D. virilis EST Drosophila viri... 38 9.0 2 (EJ784620) 1093017304439 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.0 2 (BJ445487) Dictyostelium discoideum cDNA clone:ddv59i15, 3' ... 36 9.1 2 (ET759119) CHO_OF294xd21f1.ab1 CHO_OF Nicotiana tabacum geno... 36 9.2 3 (EB573622) AGENCOURT_51779016 D. virilis EST Drosophila viri... 38 9.2 2 (EY382102) CAXA3860.fwd CAXA Helobdella robusta Subtracted L... 34 9.2 3 (EB570098) AGENCOURT_51878378 D. virilis EST Drosophila viri... 38 9.2 2 (EB559105) AGENCOURT_51360293 D. virilis EST Drosophila viri... 38 9.3 2 (EB561819) AGENCOURT_51117010 D. virilis EST Drosophila viri... 38 9.3 2 (EB563563) AGENCOURT_51357216 D. virilis EST Drosophila viri... 38 9.4 2 (EB570945) AGENCOURT_51105701 D. virilis EST Drosophila viri... 38 9.4 2 (EB560145) AGENCOURT_51116855 D. virilis EST Drosophila viri... 38 9.4 2 (EY380417) CAXA2863.fwd CAXA Helobdella robusta Subtracted L... 34 9.4 3 (CS623672) Sequence 223 from Patent WO2006071466. 34 9.4 3 (EB560605) AGENCOURT_51877220 D. virilis EST Drosophila viri... 38 9.5 2 (CT010430) Mouse DNA sequence from clone RP23-335P18 on chro... 40 9.5 6 (EB560671) AGENCOURT_51198572 D. virilis EST Drosophila viri... 38 9.6 2 (AU073682) Dictyostelium discoideum slug cDNA, clone SSH819. 32 9.6 3 (AF442957) Ostrinia nubilalis mitochondrion, complete genome. 44 9.6 3 (AF467260) Ostrinia furnacalis mitochondrion, complete genome. 44 9.6 3 (EB570924) AGENCOURT_51958786 D. virilis EST Drosophila viri... 38 9.7 2 (CO108964) GR__Eb0041A23.r GR__Eb Gossypium raimondii cDNA c... 32 9.7 3 (AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 44 9.7 3 (EB561359) AGENCOURT_51102538 D. virilis EST Drosophila viri... 38 9.8 2 (AJ581661) Dictyostelium discoideum partial dstB gene for Dd... 40 9.8 3 (EK308731) 1095462389290 Global-Ocean-Sampling_GS-31-01-01-1... 44 9.8 2 (CL354072) RPCI44_405K12.f RPCI-44 Sus scrofa genomic clone ... 32 9.9 4 (AC106469) Rattus norvegicus clone CH230-212N10, WORKING DRA... 34 9.9 2 (EB572683) AGENCOURT_51898786 D. virilis EST Drosophila viri... 38 9.9 2 (EJ784706) 1093017305207 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.9 2 (AC183573) Canis familiaris chromosome 8, clone XX-208N15, c... 34 9.9 2 (BJ426611) Dictyostelium discoideum cDNA clone:ddv59i15, 5' ... 36 10.0 2 (AC137455) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 34 10.0 2
>(BJ342675) Dictyostelium discoideum cDNA clone:dda1h06, 3' end, single read. Length = 464
Score = 496 bits (250), Expect(3) = 0.0 Identities = 250/250 (100%) Strand = Plus / Minus
Query: 1942 cggattggattcattggatcattatcagcttttagagttggaatcaagttttcataatgg 2001 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 cggattggattcattggatcattatcagcttttagagttggaatcaagttttcataatgg 218
Query: 2002 tttaaaacaaattggttctataaaagatcaaagatacctcaatcgtttggtttcactgga 2061 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 tttaaaacaaattggttctataaaagatcaaagatacctcaatcgtttggtttcactgga 158
Query: 2062 aaaagagaaagatcaattaaaagatcaaaatagttgtgtcatttgcgcttcaaaccctcc 2121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 aaaagagaaagatcaattaaaagatcaaaatagttgtgtcatttgcgcttcaaaccctcc 98
Query: 2122 aaatattgtattactaccatgtagacatagttcattatgttcagattgttgttcaaaatt 2181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 aaatattgtattactaccatgtagacatagttcattatgttcagattgttgttcaaaatt 38
Query: 2182 aacaaaatgt 2191 |||||||||| Sbjct: 37 aacaaaatgt 28
Score = 254 bits (128), Expect(3) = 0.0 Identities = 128/128 (100%) Strand = Plus / Minus
Query: 1765 tattaatagattatcaatttcatcaaatagttcaacattatcatcaaaagatagttttta 1824 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 tattaatagattatcaatttcatcaaatagttcaacattatcatcaaaagatagttttta 395
Query: 1825 ttttgaatcaaagattcaagaattatcaaatcaattaaaagagaaacaacaagctattac 1884 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ttttgaatcaaagattcaagaattatcaaatcaattaaaagagaaacaacaagctattac 335
Query: 1885 cgatcgtg 1892 |||||||| Sbjct: 334 cgatcgtg 327
Score = 46.1 bits (23), Expect(3) = 0.0 Identities = 26/26 (100%) Strand = Plus / Minus
Query: 2192 ccaatttgtagatncccatattgaaa 2217 |||||||||||||||||||||||||| Sbjct: 26 ccaatttgtagatncccatattgaaa 1
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 98226423 Number of Hits to DB: 1,848,296,956 Number of extensions: 124773588 Number of successful extensions: 12626308 Number of sequences better than 10.0: 379 Length of query: 2217 Length of database: 98,766,808,389 Length adjustment: 24 Effective length of query: 2193 Effective length of database: 96,409,374,237 Effective search space: 211425757701741 Effective search space used: 211425757701741 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 7.16 |
Homology vs Protein |
Query= Contig-U15517-1 (Contig-U15517-1Q) /CSM_Contig/Contig-U15517-1Q.Seq.d (2217 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q7M3S9) RecName: Full=RING finger protein B; Short=Pro... 269 3e-70 S68824(S68824)rngB protein, cytosolic - slime mold (Dictyosteliu... 268 5e-70 BT061901_1(BT061901|pid:none) Zea mays full-length cDNA clone ZM... 59 6e-07 EU961520_1(EU961520|pid:none) Zea mays clone 236111 CONSTANS int... 59 6e-07 AY125510_1(AY125510|pid:none) Arabidopsis thaliana AT5g19080/T16... 59 1e-06 T21007(T21007) hypothetical protein F16A11.1 - Caenorhabditis el... 57 2e-06 AC148486_7(AC148486|pid:none) Medicago truncatula clone mth2-56d... 57 2e-06 AC146570_3(AC146570|pid:none) Medicago truncatula clone mth2-103... 57 4e-06 (Q62210) RecName: Full=Baculoviral IAP repeat-containing protein... 57 4e-06 BT006357_1(BT006357|pid:none) Arabidopsis thaliana At5g19080/T16... 57 4e-06 AK100160_1(AK100160|pid:none) Oryza sativa Japonica Group cDNA c... 57 4e-06 BT061187_1(BT061187|pid:none) Zea mays full-length cDNA clone ZM... 56 5e-06 AF190020_1(AF190020|pid:none) Rattus norvegicus inhibitor of apo... 56 6e-06 CR859301_1(CR859301|pid:none) Pongo abelii mRNA; cDNA DKFZp468N1... 55 8e-06 BC129545_1(BC129545|pid:none) Xenopus laevis hypothetical protei... 55 8e-06 L49441_1(L49441|pid:none) Drosophila melanogaster apoptosis 2 in... 55 8e-06 U38809_1(U38809|pid:none) Drosophila melanogaster IAP homolog A ... 55 8e-06 U45881_1(U45881|pid:none) Drosophila melanogaster inhibitor of a... 55 8e-06 (O62640) RecName: Full=Putative inhibitor of apoptosis; &JC5964... 55 8e-06 AK303197_1(AK303197|pid:none) Homo sapiens cDNA FLJ57692 complet... 55 1e-05 AB005240_11(AB005240|pid:none) Arabidopsis thaliana genomic DNA,... 55 1e-05 AY184377_1(AY184377|pid:none) Ictalurus punctatus inhibitor of a... 55 1e-05 AE014296_777(AE014296|pid:none) Drosophila melanogaster chromoso... 55 1e-05 DQ223014_1(DQ223014|pid:none) Canis familiaris baculoviral IAP r... 55 1e-05 AY247786_1(AY247786|pid:none) Danio rerio inhibitor of apoptosis... 54 2e-05 AB354113_1(AB354113|pid:none) Carassius auratus birc2 mRNA for b... 54 2e-05 AY051832_1(AY051832|pid:none) Drosophila melanogaster LD33756 fu... 54 2e-05 S42526(S42526;S22126) finger protein unkempt - fruit fly (Drosop... 54 2e-05 EU965370_1(EU965370|pid:none) Zea mays clone 285598 CONSTANS int... 54 2e-05 BC155423_1(BC155423|pid:none) Xenopus tropicalis hypothetical pr... 54 2e-05 EU960532_1(EU960532|pid:none) Zea mays clone 225881 CONSTANS int... 54 2e-05 AB220514_1(AB220514|pid:none) Macaca fascicularis mRNA, clone Qn... 54 3e-05 AF223395_1(AF223395|pid:none) Petunia x hybrida S-ribonuclease b... 53 4e-05 (Q13489) RecName: Full=Baculoviral IAP repeat-containing protein... 53 4e-05 AF070674_1(AF070674|pid:none) Homo sapiens inhibitor of apoptosi... 53 4e-05 DQ250022_1(DQ250022|pid:none) Petunia integrifolia subsp. inflat... 53 4e-05 AM494955_124(AM494955|pid:none) Leishmania braziliensis chromoso... 53 4e-05 BC074562_1(BC074562|pid:none) Xenopus tropicalis baculoviral IAP... 53 4e-05 (O08863) RecName: Full=Baculoviral IAP repeat-containing protein... 53 5e-05 EF214982_1(EF214982|pid:none) Callithrix jacchus clone M13-51.1_... 53 5e-05 AK315318_1(AK315318|pid:none) Homo sapiens cDNA, FLJ96350, highl... 53 5e-05 (A1E2V0) RecName: Full=Baculoviral IAP repeat-containing protein... 53 5e-05 BC015063_1(BC015063|pid:none) Homo sapiens cell growth regulator... 53 5e-05 (B0G0Y5) RecName: Full=Myb-like protein AA; 52 7e-05 AB179092_1(AB179092|pid:none) Macaca fascicularis testis cDNA cl... 52 7e-05 AC015985_17(AC015985|pid:none) Arabidopsis thaliana chromosome I... 52 7e-05 BC028424_1(BC028424|pid:none) Homo sapiens ring finger and FYVE-... 52 7e-05 AK289478_1(AK289478|pid:none) Homo sapiens cDNA FLJ77881 complet... 52 7e-05 EF085196_1(EF085196|pid:none) Picea sitchensis clone WS0296_I06 ... 52 7e-05 BT055963_1(BT055963|pid:none) Zea mays full-length cDNA clone ZM... 52 7e-05 (Q90660) RecName: Full=Inhibitor of apoptosis protein; ... 52 9e-05 AB271956_1(AB271956|pid:none) Sus scrofa MGRN1 mRNA for mahoguni... 52 9e-05 AC099040_16(AC099040|pid:none) Oryza sativa chromosome 10 BAC OS... 52 9e-05 AY229987_84(AY229987|pid:none) Cryptophlebia leucotreta granulov... 52 9e-05 AF039047_10(AF039047|pid:none) Caenorhabditis elegans cosmid K11... 52 9e-05 T19204(T19204) hypothetical protein C11H1.3 - Caenorhabditis ele... 52 9e-05 AM494946_44(AM494946|pid:none) Leishmania braziliensis chromosom... 52 1e-04 EF624461_1(EF624461|pid:none) Oryza sativa (japonica cultivar-gr... 52 1e-04 AC087797_3(AC087797|pid:none) Oryza sativa chromosome 3 BAC OSJN... 52 1e-04 AK222441_1(AK222441|pid:none) Ciona intestinalis mRNA for zinc f... 52 1e-04 AY545464_1(AY545464|pid:none) Solanum chacoense S-RNase binding ... 52 1e-04 AY490246_1(AY490246|pid:none) Lycopersicon esculentum CONSTANS i... 52 1e-04 AE014298_2033(AE014298|pid:none) Drosophila melanogaster chromos... 52 1e-04 AJ293945_1(AJ293945|pid:none) Paramecium tetraurelia macronuclea... 52 1e-04 AC010852_7(AC010852|pid:none) Arabidopsis thaliana chromosome 1 ... 52 1e-04 AK176213_1(AK176213|pid:none) Arabidopsis thaliana mRNA, complet... 52 1e-04 EF114675_1(EF114675|pid:none) Penaeus monodon inhibitor of apopt... 52 1e-04 EF085152_1(EF085152|pid:none) Picea sitchensis clone WS0272_C07 ... 51 2e-04 AC152123_7(AC152123|pid:none) Genomic sequence for broccoli [Bra... 51 2e-04 CT005248_56(CT005248|pid:none) Leishmania major strain Friedlin,... 51 2e-04 AY390600_1(AY390600|pid:none) Solanum chacoense S-RNase-binding ... 51 2e-04 AY814904_1(AY814904|pid:none) Schistosoma japonicum SJCHGC09314 ... 51 2e-04 BC061651_1(BC061651|pid:none) Xenopus laevis hypothetical protei... 51 2e-04 AM502227_41(AM502227|pid:none) Leishmania infantum chromosome 9. 51 2e-04 EF144875_1(EF144875|pid:none) Populus trichocarpa clone WS01119_... 51 2e-04 BC090462_1(BC090462|pid:none) Danio rerio hypothetical protein L... 50 3e-04 EF471398_1(EF471398|pid:none) Homo sapiens mahogunin variant 2.2... 50 3e-04 AB236755_1(AB236755|pid:none) Trifolium pratense RNA for hypothe... 50 3e-04 AL928800_6(AL928800|pid:none) Zebrafish DNA sequence from clone ... 50 3e-04 (O60291) RecName: Full=Probable E3 ubiquitin-protein ligase MGRN... 50 3e-04 EF471397_1(EF471397|pid:none) Homo sapiens mahogunin variant 1.2... 50 3e-04 BT076963_1(BT076963|pid:none) Caligus rogercresseyi clone crog-e... 50 3e-04 AJ720958_1(AJ720958|pid:none) Gallus gallus mRNA for hypothetica... 50 3e-04 BC050389_1(BC050389|pid:none) Homo sapiens mahogunin, ring finge... 50 3e-04 AK222451_1(AK222451|pid:none) Ciona intestinalis mRNA for zinc f... 50 3e-04 AM502254_293(AM502254|pid:none) Leishmania infantum chromosome 36. 50 3e-04 AM451749_3(AM451749|pid:none) Vitis vinifera contig VV78X233142.... 50 3e-04 AC068924_30(AC068924|pid:none) Oryza sativa chromosome 10 BAC OS... 50 3e-04 (Q6ZQM0) RecName: Full=E3 ubiquitin-protein ligase rififylin; ... 50 3e-04 AM494972_406(AM494972|pid:none) Leishmania braziliensis chromoso... 50 3e-04 AF434814_1(AF434814|pid:none) Mus musculus fring mRNA, complete ... 50 3e-04 BC079216_1(BC079216|pid:none) Rattus norvegicus ring finger and ... 50 3e-04 AK150541_1(AK150541|pid:none) Mus musculus bone marrow macrophag... 50 3e-04 U53466_94(U53466|pid:none) Cydia pomonella granulovirus, complet... 50 3e-04 AC013354_5(AC013354|pid:none) Genomic sequence for Arabidopsis t... 50 3e-04 (Q8CIN9) RecName: Full=E3 ubiquitin-protein ligase rififylin; ... 50 3e-04 AK150213_1(AK150213|pid:none) Mus musculus bone marrow macrophag... 50 3e-04 AK169393_1(AK169393|pid:none) Mus musculus 17 days pregnant adul... 50 3e-04 AY559037_1(AY559037|pid:none) Aedes aegypti inhibitor of apoptos... 50 5e-04 BC015681_1(BC015681|pid:none) Homo sapiens ring finger and FYVE-... 50 5e-04 EU258200_110(EU258200|pid:none) Spodoptera frugiperda MNPV isola... 50 5e-04 BC004231_1(BC004231|pid:none) Homo sapiens ring finger protein 1... 50 5e-04 AX397898_1(AX397898|pid:none) Sequence 1 from Patent WO0220562. 50 5e-04 AB067504_1(AB067504|pid:none) Homo sapiens mRNA for KIAA1917 pro... 50 5e-04 AF451898_135(AF451898|pid:none) Heliothis zea virus 1, complete ... 50 5e-04 DQ307171_1(DQ307171|pid:none) Glossina morsitans morsitans clone... 50 5e-04 (Q8WZ73) RecName: Full=E3 ubiquitin-protein ligase rififylin; ... 50 5e-04 DQ993355_1(DQ993355|pid:none) Aedes aegypti inhibitor of apoptos... 50 5e-04 AY736005_1(AY736005|pid:none) Aedes aegypti inihibitor of apopto... 49 6e-04 BC037677_1(BC037677|pid:none) Mus musculus cell growth regulator... 49 6e-04 AB197252_1(AB197252|pid:none) Xenopus laevis mRNA for xXIAP, com... 49 6e-04 AF447592_1(AF447592|pid:none) Ochlerotatus triseriatus inhibitor... 49 6e-04 AF488809_1(AF488809|pid:none) Aedes albopictus inhibitor of apot... 49 6e-04 BC169996_1(BC169996|pid:none) Xenopus laevis IAP-like protein, m... 49 8e-04 AY088707_1(AY088707|pid:none) Arabidopsis thaliana clone 924 mRN... 49 8e-04 AL645861_13(AL645861|pid:none) Mouse DNA sequence from clone RP2... 49 8e-04 AP008215_601(AP008215|pid:none) Oryza sativa (japonica cultivar-... 49 8e-04 AK169566_1(AK169566|pid:none) Mus musculus 2 days neonate thymus... 49 8e-04 AK153407_1(AK153407|pid:none) Mus musculus bone marrow macrophag... 49 8e-04 (P97587) RecName: Full=Cell growth regulator with RING finger do... 49 8e-04 (Q7ZUL9) RecName: Full=Probable E3 ubiquitin-protein ligase MGRN... 49 8e-04 BC171584_1(BC171584|pid:none) Danio rerio mahogunin, ring finger... 49 8e-04 AJ297298_1(AJ297298|pid:none) Pinus pinaster partial mRNA for pu... 49 8e-04 (Q3TEL6) RecName: Full=RING finger protein 157; 49 8e-04 L49440_1(L49440|pid:none) Drosophila melanogaster apoptosis 1 in... 49 8e-04 (Q9D074) RecName: Full=Probable E3 ubiquitin-protein ligase MGRN... 49 8e-04 AK228124_1(AK228124|pid:none) Arabidopsis thaliana mRNA for hypo... 49 8e-04 AL645861_11(AL645861|pid:none) Mouse DNA sequence from clone RP2... 49 8e-04 AK150176_1(AK150176|pid:none) Mus musculus bone marrow macrophag... 49 8e-04 (Q24306) RecName: Full=Apoptosis 1 inhibitor; AltName: Full=Inhi... 49 8e-04 T18504(T18504)hypothetical protein C0740c - malaria parasite (Pl... 49 0.001 AB062739_1(AB062739|pid:none) Arabidopsis thaliana MKRP2 mRNA fo... 49 0.001 AY091060_1(AY091060|pid:none) Arabidopsis thaliana putative kine... 49 0.001 AM910990_249(AM910990|pid:none) Plasmodium knowlesi strain H chr... 49 0.001 BC090590_1(BC090590|pid:none) Xenopus tropicalis ring finger and... 48 0.001 AC161864_1(AC161864|pid:none) Medicago truncatula clone mth2-69d... 48 0.001 DQ517337_32(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com... 48 0.001 AC006841_13(AC006841|pid:none) Arabidopsis thaliana chromosome 2... 48 0.001 AF499596_86(AF499596|pid:none) Phthorimaea operculella granulovi... 48 0.002 AY909512_1(AY909512|pid:none) Siniperca chuatsi clone C376 apopt... 48 0.002 AB171795_1(AB171795|pid:none) Macaca fascicularis brain cDNA clo... 48 0.002 BT035359_1(BT035359|pid:none) Zea mays full-length cDNA clone ZM... 48 0.002 BT054232_1(BT054232|pid:none) Zea mays full-length cDNA clone ZM... 48 0.002 CR940347_203(CR940347|pid:none) Theileria annulata strain Ankara... 48 0.002 AM471824_2(AM471824|pid:none) Vitis vinifera contig VV78X201397.... 48 0.002 AL954707_5(AL954707|pid:none) Mouse DNA sequence from clone RP23... 47 0.003 AE016819_445(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 47 0.003 AY864330_62(AY864330|pid:none) Chrysodeixis chalcites nucleopoly... 47 0.003 AK299052_1(AK299052|pid:none) Homo sapiens cDNA FLJ60814 complet... 47 0.003 CT005257_160(CT005257|pid:none) Leishmania major strain Friedlin... 47 0.003 AY098935_1(AY098935|pid:none) Homo sapiens FYVE-RING finger prot... 47 0.003 AM502236_157(AM502236|pid:none) Leishmania infantum chromosome 18. 47 0.003 BC149770_1(BC149770|pid:none) Bos taurus myosin regulatory light... 47 0.003 AM398843_74(AM398843|pid:none) Spodoptera frugiperda ascovirus 1... 47 0.003 AY087533_1(AY087533|pid:none) Arabidopsis thaliana clone 36412 m... 47 0.003 CQ789350_1(CQ789350|pid:none) Sequence 1 from Patent WO200401799... 47 0.004 CP000596_71(CP000596|pid:none) Ostreococcus lucimarinus CCE9901 ... 47 0.004 AF063866_248(AF063866|pid:none) Melanoplus sanguinipes entomopox... 47 0.004 AK313883_1(AK313883|pid:none) Homo sapiens cDNA, FLJ94517, highl... 47 0.004 AM502227_127(AM502227|pid:none) Leishmania infantum chromosome 9. 47 0.004 AY893036_1(AY893036|pid:none) Synthetic construct Homo sapiens c... 47 0.004 BC161793_1(BC161793|pid:none) Xenopus tropicalis hypothetical pr... 47 0.004 CR954201_543(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 47 0.004 BT080230_1(BT080230|pid:none) Caligus clemensi clone ccle-evs-50... 47 0.004 (Q95M72) RecName: Full=Baculoviral IAP repeat-containing protein... 47 0.004 AM494947_124(AM494947|pid:none) Leishmania braziliensis chromoso... 47 0.004 AF304334_1(AF304334|pid:none) Rattus norvegicus clone 2 inhibito... 46 0.005 BC124268_1(BC124268|pid:none) Danio rerio zgc:153175, mRNA (cDNA... 46 0.005 AF187016_1(AF187016|pid:none) Homo sapiens myosin regulatory lig... 46 0.005 EF203088_98(EF203088|pid:none) Gryllus bimaculatus nudivirus, co... 46 0.005 (Q9CZ54) RecName: Full=RING finger and SPRY domain-containing pr... 46 0.005 BC080063_1(BC080063|pid:none) Xenopus laevis MGC84042 protein, m... 46 0.005 (Q8WY64) RecName: Full=E3 ubiquitin-protein ligase MYLIP; ... 46 0.005 AF183429_1(AF183429|pid:none) Rattus norvegicus inhibitor of apo... 46 0.005 AK031153_1(AK031153|pid:none) Mus musculus 13 days embryo foreli... 46 0.005 AF304333_1(AF304333|pid:none) Rattus norvegicus clone 1 inhibito... 46 0.005 AJ851471_1(AJ851471|pid:none) Gallus gallus mRNA for hypothetica... 46 0.005 AK172567_1(AK172567|pid:none) Mus musculus activated spleen cDNA... 46 0.005 CP001328_355(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 46 0.005 AY892142_1(AY892142|pid:none) Synthetic construct Homo sapiens c... 46 0.005 (Q5M7X9) RecName: Full=Mitochondrial ubiquitin ligase activator ... 46 0.005 AF547984_89(AF547984|pid:none) Adoxophyes orana granulovirus, co... 46 0.005 AY155274_1(AY155274|pid:none) Bombyx mori inhibitor of apoptosis... 46 0.007 AK229071_1(AK229071|pid:none) Arabidopsis thaliana mRNA for hypo... 46 0.007 BC014475_1(BC014475|pid:none) Homo sapiens baculoviral IAP repea... 46 0.007 AF281073_1(AF281073|pid:none) Bombyx mori inhibitor of apoptosis... 46 0.007 AF311388_1(AF311388|pid:none) Homo sapiens livin inhibitor-of-ap... 46 0.007 BC077535_1(BC077535|pid:none) Xenopus laevis MGC83329 protein, m... 46 0.007 FN357513_14(FN357513|pid:none) Schistosoma mansoni genome sequen... 46 0.007 AP008210_2259(AP008210|pid:none) Oryza sativa (japonica cultivar... 45 0.009 AL732351_6(AL732351|pid:none) Oryza sativa genomic DNA, chromoso... 45 0.009 AL606457_18(AL606457|pid:none) Oryza sativa genomic DNA, chromos... 45 0.009 EF125867_18(EF125867|pid:none) Maruca vitrata MNPV, complete gen... 45 0.009 AF266700_1(AF266700|pid:none) Helicoverpa armigera nuclear polyh... 45 0.009 AC174297_6(AC174297|pid:none) Medicago truncatula clone mth2-73p... 45 0.009 BC133126_1(BC133126|pid:none) Danio rerio X-linked inhibitor of ... 45 0.009 BC055246_1(BC055246|pid:none) Danio rerio X-linked inhibitor of ... 45 0.009 AY603038_1(AY603038|pid:none) Canis familiaris X-linked inhibito... 45 0.009 BC161486_1(BC161486|pid:none) Xenopus tropicalis cDNA clone MGC:... 45 0.011 AE013599_1686(AE013599|pid:none) Drosophila melanogaster chromos... 45 0.011 BC160454_1(BC160454|pid:none) Xenopus tropicalis unkempt homolog... 45 0.011 BC039318_1(BC039318|pid:none) Homo sapiens baculoviral IAP repea... 45 0.011 AK102708_1(AK102708|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.011 AX370787_1(AX370787|pid:none) Sequence 1 from Patent WO0210381. 45 0.011 AC092212_59(AC092212|pid:none) Trypanosoma brucei chromosome 8 c... 45 0.011 AF512031_30(AF512031|pid:none) Choristoneura fumiferana MNPV pol... 45 0.011 AP004150_5(AP004150|pid:none) Oryza sativa Japonica Group genomi... 45 0.011 AK222447_1(AK222447|pid:none) Ciona intestinalis mRNA for zinc f... 45 0.011 AY058770_1(AY058770|pid:none) Drosophila melanogaster SD05126 fu... 45 0.011 AK040836_1(AK040836|pid:none) Mus musculus adult male aorta and ... 45 0.015 BC010206_1(BC010206|pid:none) Mus musculus myosin regulatory lig... 45 0.015 EU780426_115(EU780426|pid:none) Spodoptera litura nucleopolyhedr... 45 0.015 BT059463_1(BT059463|pid:none) Salmo salar clone ssal-rgf-513-225... 45 0.015 (Q8BM54) RecName: Full=E3 ubiquitin-protein ligase MYLIP; ... 45 0.015 FN357317_50(FN357317|pid:none) Schistosoma mansoni genome sequen... 45 0.015 BT084874_1(BT084874|pid:none) Zea mays full-length cDNA clone ZM... 45 0.015 AK171888_1(AK171888|pid:none) Mus musculus activated spleen cDNA... 45 0.015 BC123024_1(BC123024|pid:none) Xenopus tropicalis hypothetical pr... 44 0.019 AM472308_2(AM472308|pid:none) Vitis vinifera contig VV78X181029.... 44 0.019 DQ517337_9(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, comp... 44 0.019 T31548(T31548)hypothetical protein Y47D3A.22 - Caenorhabditis el... 44 0.019 (Q969V5) RecName: Full=Mitochondrial ubiquitin ligase activator ... 44 0.019 CU928173_383(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 44 0.019 BC087326_1(BC087326|pid:none) Xenopus laevis hypothetical LOC495... 44 0.019 EU976467_1(EU976467|pid:none) Zea mays clone 895080 hypothetical... 44 0.019 BC080411_1(BC080411|pid:none) Xenopus laevis MGC86306 protein, m... 44 0.019 AK303820_1(AK303820|pid:none) Homo sapiens cDNA FLJ55316 complet... 44 0.019 (Q4R7G8) RecName: Full=Mitochondrial ubiquitin ligase activator ... 44 0.019 (Q84JU6) RecName: Full=E3 ubiquitin-protein ligase HOS1; ... 44 0.019 AF303741_158(AF303741|pid:none) Chilo iridescent virus complete ... 44 0.019 BC118765_1(BC118765|pid:none) Xenopus tropicalis hypothetical pr... 44 0.019 AC003000_13(AC003000|pid:none) Arabidopsis thaliana chromosome 2... 44 0.019 AM709785_1(AM709785|pid:none) Spodoptera littoralis mRNA for inh... 44 0.025 EU952813_1(EU952813|pid:none) Zea mays clone 1290460 S-ribonucle... 44 0.025 D36828(D36828;C72853)orf13 protein - Autographa californica nucl... 44 0.025 BC072265_1(BC072265|pid:none) Xenopus laevis hypothetical protei... 44 0.025 EU258200_86(EU258200|pid:none) Spodoptera frugiperda MNPV isolat... 44 0.025 AK085078_1(AK085078|pid:none) Mus musculus 13 days embryo lung c... 44 0.033 AK122642_1(AK122642|pid:none) Homo sapiens cDNA FLJ16070 fis, cl... 44 0.033 EU839994_128(EU839994|pid:none) Agrotis ipsilon multiple nucleop... 44 0.033 AY522332_53(AY522332|pid:none) Agrotis segetum granulovirus, com... 44 0.033 AK033164_1(AK033164|pid:none) Mus musculus 15 days embryo male t... 44 0.033 BC158712_1(BC158712|pid:none) Rattus norvegicus ring finger prot... 44 0.033 BC111036_1(BC111036|pid:none) Mus musculus ring finger protein 2... 44 0.033 AF186378_1(AF186378|pid:none) Spodoptera frugiperda inhibitor of... 44 0.033 AC073906_37(AC073906|pid:none) Trypanosoma brucei chromosome 6 c... 44 0.033 BC130123_1(BC130123|pid:none) Xenopus laevis hypothetical protei... 44 0.033 DQ813662_71(DQ813662|pid:none) Anticarsia gemmatalis nucleopolyh... 44 0.033 DQ643392_21(DQ643392|pid:none) Aedes taeniorhynchus iridescent v... 44 0.033 AK056305_1(AK056305|pid:none) Homo sapiens cDNA FLJ31743 fis, cl... 43 0.043 AB384779_1(AB384779|pid:none) Synthetic construct DNA, clone: pF... 43 0.043 AP008215_1440(AP008215|pid:none) Oryza sativa (japonica cultivar... 43 0.043 (Q5FWH2) RecName: Full=RING finger protein unkempt-like; &BC089... 43 0.043 AK091589_1(AK091589|pid:none) Homo sapiens cDNA FLJ34270 fis, cl... 43 0.043 AF512031_36(AF512031|pid:none) Choristoneura fumiferana MNPV pol... 43 0.043 FJ882854_19(FJ882854|pid:none) Bombyx mandarina nucleopolyhedrov... 43 0.043 AY423020_1(AY423020|pid:none) Danio rerio myosin regulatory ligh... 43 0.043 AK222449_1(AK222449|pid:none) Ciona intestinalis mRNA for zinc f... 43 0.043 AY434450_1(AY434450|pid:none) Danio rerio myosin regulatory ligh... 43 0.043 AK004898_1(AK004898|pid:none) Mus musculus adult male liver cDNA... 43 0.043 BC065679_1(BC065679|pid:none) Danio rerio myosin regulatory ligh... 43 0.043 (Q6TEM9) RecName: Full=E3 ubiquitin-protein ligase MYLIP-A; ... 43 0.043 AM398843_25(AM398843|pid:none) Spodoptera frugiperda ascovirus 1... 43 0.043 AC002292_13(AC002292|pid:none) Arabidopsis thaliana BAC F8A5, co... 43 0.043 AK056203_1(AK056203|pid:none) Homo sapiens cDNA FLJ31641 fis, cl... 43 0.043 DQ288858_106(DQ288858|pid:none) Spodoptera litura granulovirus i... 43 0.043 AK229278_1(AK229278|pid:none) Arabidopsis thaliana mRNA for hypo... 43 0.043 AB210566_1(AB210566|pid:none) Ciona intestinalis Ci-Neuralized-a... 43 0.043 L33180_19(L33180|pid:none) Bombyx mori nuclear polyhedrosis viru... 43 0.056 AC083835_8(AC083835|pid:none) Arabidopsis thaliana chromosome 1 ... 43 0.056 BC118805_1(BC118805|pid:none) Xenopus tropicalis ring finger pro... 43 0.056 DQ517337_82(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com... 43 0.056 (Q6FWF3) RecName: Full=E3 ubiquitin-protein ligase BRE1; ... 43 0.056 (P29503) RecName: Full=Protein neuralized; &AE014297_887(AE0142... 42 0.073 AB006708_10(AB006708|pid:none) Arabidopsis thaliana genomic DNA,... 42 0.073 AY136340_1(AY136340|pid:none) Arabidopsis thaliana putative prot... 42 0.073 (Q05AK5) RecName: Full=E3 ubiquitin-protein ligase MYLIP-B; ... 42 0.073 (Q8CJC5) RecName: Full=E3 ubiquitin-protein ligase LINCR; ... 42 0.073 DQ160094_1(DQ160094|pid:none) Taraxacum officinale TO65-3 (To65-... 42 0.073 AE014297_885(AE014297|pid:none) Drosophila melanogaster chromoso... 42 0.073 AY136366_1(AY136366|pid:none) Arabidopsis thaliana unknown prote... 42 0.095 AF169823_110(AF169823|pid:none) Spodoptera exigua nucleopolyhedr... 42 0.095 AF119227_1(AF119227|pid:none) Epiphyas postvittana nucleopolyhed... 42 0.095 AY327402_67(AY327402|pid:none) Choristoneura fumiferana defectiv... 42 0.095 DQ837165_54(DQ837165|pid:none) Ecotropis obliqua NPV strain A1, ... 42 0.095 U40945_5(U40945|pid:none) Caenorhabditis elegans cosmid F10D7, c... 42 0.095 (Q5M870) RecName: Full=E3 ubiquitin-protein ligase LINCR; ... 42 0.095 AC005314_30(AC005314|pid:none) Arabidopsis thaliana chromosome 2... 42 0.095 AK025439_1(AK025439|pid:none) Homo sapiens cDNA: FLJ21786 fis, c... 42 0.095 CR761586_1(CR761586|pid:none) Xenopus tropicalis finished cDNA, ... 42 0.095 AY087705_1(AY087705|pid:none) Arabidopsis thaliana clone 37809 m... 42 0.095 BC135701_1(BC135701|pid:none) Xenopus tropicalis cDNA clone IMAG... 42 0.095 BC128669_1(BC128669|pid:none) Xenopus laevis hypothetical protei... 42 0.095 BC161012_1(BC161012|pid:none) Xenopus tropicalis mex-3 homolog C... 42 0.095 AF271059_61(AF271059|pid:none) Heliocoverpa armigera nucleopolyh... 42 0.095 AE017344_204(AE017344|pid:none) Cryptococcus neoformans var. neo... 42 0.095 AB088848_1(AB088848|pid:none) Hyphantria cunea nucleopolyhedrovi... 42 0.095 (O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 42 0.12 AK229958_1(AK229958|pid:none) Arabidopsis thaliana mRNA for hypo... 42 0.12 BC161083_1(BC161083|pid:none) Xenopus tropicalis mindbomb homolo... 42 0.12 AF303045_61(AF303045|pid:none) Helicoverpa armigera nuclear poly... 42 0.12 BC110246_1(BC110246|pid:none) Bos taurus ring finger protein 34,... 42 0.12 (Q5E9J6) RecName: Full=E3 ubiquitin-protein ligase RNF34; ... 42 0.12 BT040274_1(BT040274|pid:none) Zea mays full-length cDNA clone ZM... 42 0.12 CR926044_1(CR926044|pid:none) Pongo abelii mRNA; cDNA DKFZp459H1... 42 0.12 AY157968_1(AY157968|pid:none) Rattus norvegicus RING finger prot... 42 0.12 AB084914_1(AB084914|pid:none) Homo sapiens hRFI mRNA for hypothe... 42 0.12 AY305852_1(AY305852|pid:none) Elaeis guineensis clone MLT1 S-rib... 42 0.12 EU780426_91(EU780426|pid:none) Spodoptera litura nucleopolyhedro... 42 0.12 CR861076_1(CR861076|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 42 0.12 (Q969K3) RecName: Full=E3 ubiquitin-protein ligase RNF34; ... 42 0.12 DQ517337_56(DQ517337|pid:none) Trichoplusia ni ascovirus 2c, com... 42 0.12 EU958063_1(EU958063|pid:none) Zea mays clone 1670995 S-ribonucle... 42 0.12 EU730893_131(EU730893|pid:none) Helicoverpa armigera multiple nu... 42 0.12 BC044808_1(BC044808|pid:none) Homo sapiens chromosome 14 open re... 42 0.12 AB088849_1(AB088849|pid:none) Hyphantria cunea nucleopolyhedrovi... 42 0.12 (Q99KR6) RecName: Full=E3 ubiquitin-protein ligase RNF34; ... 42 0.12 CR548612_300(CR548612|pid:none) Paramecium tetraurelia macronucl... 41 0.16 BT040951_1(BT040951|pid:none) Zea mays full-length cDNA clone ZM... 41 0.16 AB168336_1(AB168336|pid:none) Macaca fascicularis testis cDNA cl... 41 0.16 AY522332_106(AY522332|pid:none) Agrotis segetum granulovirus, co... 41 0.16 CR940347_249(CR940347|pid:none) Theileria annulata strain Ankara... 41 0.16 EU255577_139(EU255577|pid:none) Helicoverpa armigera granuloviru... 41 0.16 (Q5ZIJ9) RecName: Full=E3 ubiquitin-protein ligase MIB2; ... 41 0.16 EU951808_1(EU951808|pid:none) Zea mays clone 1060968 unknown mRNA. 41 0.16 (Q2HJ46) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 41 0.16 CR954209_268(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 41 0.21 BC151099_1(BC151099|pid:none) Mus musculus RIKEN cDNA 2900006K08... 41 0.21 AY491413_7(AY491413|pid:none) Mus musculus chromosome 17 clone B... 41 0.21 BC163626_1(BC163626|pid:none) Danio rerio mind bomb 2, mRNA (cDN... 41 0.21 AK120702_1(AK120702|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.21 BC073521_1(BC073521|pid:none) Xenopus laevis hypothetical protei... 41 0.21 EF148266_1(EF148266|pid:none) Populus trichocarpa x Populus delt... 41 0.21 AY086544_1(AY086544|pid:none) Arabidopsis thaliana clone 257053 ... 41 0.21 EF395147_1(EF395147|pid:none) Vassobia breviflora isolate v001 M... 41 0.21 AC017118_12(AC017118|pid:none) Genomic sequence for Arabidopsis ... 41 0.21 AF334030_64(AF334030|pid:none) Helicoverpa zea single nucleocaps... 41 0.21 AE017343_243(AE017343|pid:none) Cryptococcus neoformans var. neo... 41 0.21 S35371(S35371;S17312) finger protein neuralized - fruit fly (Dro... 41 0.21 (Q7ZX20) RecName: Full=E3 ubiquitin-protein ligase RNF8 A; ... 41 0.21 BC097606_1(BC097606|pid:none) Xenopus laevis hypothetical protei... 41 0.21 (Q5R4I2) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 41 0.21 BC150842_1(BC150842|pid:none) Mus musculus unkempt-like (Drosoph... 41 0.21 EU959468_1(EU959468|pid:none) Zea mays clone 218243 inhibitor of... 41 0.21 AF303741_176(AF303741|pid:none) Chilo iridescent virus complete ... 41 0.21 AK002416_1(AK002416|pid:none) Mus musculus adult male kidney cDN... 40 0.28 AF180757_2(AF180757|pid:none) Epiphyas postvittana nucleopolyhed... 40 0.28 AK129331_1(AK129331|pid:none) Mus musculus mRNA for mKIAA1323 pr... 40 0.28 AY813682_1(AY813682|pid:none) Schistosoma japonicum SJCHGC09572 ... 40 0.28 EF085507_1(EF085507|pid:none) Picea sitchensis clone WS02722_C14... 40 0.28 BC022403_1(BC022403|pid:none) Homo sapiens mindbomb homolog 1 (D... 40 0.28 (Q8VCM5) RecName: Full=Mitochondrial ubiquitin ligase activator ... 40 0.28 BC083072_1(BC083072|pid:none) Mus musculus mindbomb homolog 1 (D... 40 0.28 (Q86XN8) RecName: Full=RNA-binding protein MEX3D; AltName: Full=... 40 0.28 (Q80SY4) RecName: Full=E3 ubiquitin-protein ligase MIB1; ... 40 0.28 AF458084_1(AF458084|pid:none) Homo sapiens bcl-2 ARE RNA binding... 40 0.28 AC005278_3(AC005278|pid:none) Arabidopsis thaliana chromosome 1 ... 40 0.28 AK075157_1(AK075157|pid:none) Homo sapiens cDNA FLJ90676 fis, cl... 40 0.28 BC019516_1(BC019516|pid:none) Mus musculus mitochondrial ubiquit... 40 0.28 AK170149_1(AK170149|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.28 AF169823_88(AF169823|pid:none) Spodoptera exigua nucleopolyhedro... 40 0.28 BC123994_1(BC123994|pid:none) Xenopus tropicalis hypothetical pr... 40 0.28 BC011287_1(BC011287|pid:none) Mus musculus mindbomb homolog 1 (D... 40 0.28 BC131662_1(BC131662|pid:none) Mus musculus mindbomb homolog 1 (D... 40 0.28 AM398843_16(AM398843|pid:none) Spodoptera frugiperda ascovirus 1... 40 0.28 AM920458_1(AM920458|pid:none) Penicillium chrysogenum Wisconsin ... 40 0.28 AK161848_1(AK161848|pid:none) Mus musculus adult male medulla ob... 40 0.28 AM920437_2668(AM920437|pid:none) Penicillium chrysogenum Wiscons... 40 0.28 AB107353_1(AB107353|pid:none) Homo sapiens mRNA for KIAA2031 pro... 40 0.28 (Q58651) RecName: Full=Uncharacterized protein MJ1254; &E64456(... 40 0.36 CP000123_804(CP000123|pid:none) Mycoplasma capricolum subsp. cap... 40 0.36 BC125427_1(BC125427|pid:none) Mus musculus mex3 homolog C (C. el... 40 0.36 DQ813662_41(DQ813662|pid:none) Anticarsia gemmatalis nucleopolyh... 40 0.36 EU747721_134(EU747721|pid:none) Oryctes rhinoceros virus isolate... 40 0.36 BC108422_1(BC108422|pid:none) Mus musculus mex3 homolog C (C. el... 40 0.36 (Q5U5Q3) RecName: Full=RNA-binding protein MEX3C; AltName: Full=... 40 0.36 DQ334188_1(DQ334188|pid:none) Drosophila miranda CG5841 gene, pa... 40 0.36 AK241433_1(AK241433|pid:none) Oryza sativa Japonica Group cDNA, ... 40 0.36 AX405690_1(AX405690|pid:none) Sequence 105 from Patent WO0222660. 40 0.36 (Q4KLN8) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 40 0.36 (Q9SS90) RecName: Full=E3 ubiquitin-protein ligase RGLG1; ... 40 0.36 FJ227128_62(FJ227128|pid:none) Euproctis pseudoconspersa nucleop... 40 0.36 BC041122_1(BC041122|pid:none) Homo sapiens mex-3 homolog C (C. e... 40 0.36 AY327402_37(AY327402|pid:none) Choristoneura fumiferana defectiv... 40 0.36 AF208855_1(AF208855|pid:none) Homo sapiens BM-013 mRNA, complete... 40 0.36 (Q3V079) RecName: Full=Uncharacterized protein C14orf45 homolog;... 40 0.36 BC110209_1(BC110209|pid:none) Bos taurus mex-3 homolog C (C. ele... 40 0.36 AB463885_1(AB463885|pid:none) Synthetic construct DNA, clone: pF... 40 0.36 AM944365_1(AM944365|pid:none) Homo sapiens partial mRNA for puta... 40 0.47 (Q6GNY1) RecName: Full=E3 ubiquitin-protein ligase mib1; ... 40 0.47 CR380957_153(CR380957|pid:none) Candida glabrata strain CBS138 c... 40 0.47 AF539999_109(AF539999|pid:none) Mamestra configurata nucleopolyh... 40 0.47 (O10296) RecName: Full=Apoptosis inhibitor 1; AltName: Full=IAP-... 40 0.47 BT053436_1(BT053436|pid:none) Medicago truncatula clone MTYFP_FQ... 40 0.47 CP001327_254(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 40 0.47 AB013394_19(AB013394|pid:none) Arabidopsis thaliana genomic DNA,... 40 0.47 AE006467_4(AE006467|pid:none) Homo sapiens 16p13.3 sequence sect... 40 0.47 (Q9VUX2) RecName: Full=E3 ubiquitin-protein ligase mind-bomb; ... 40 0.47 AC113930_3(AC113930|pid:none) Oryza sativa (japonica cultivar-gr... 40 0.47 AB025608_19(AB025608|pid:none) Arabidopsis thaliana genomic DNA,... 39 0.61 AK022685_1(AK022685|pid:none) Homo sapiens cDNA FLJ12623 fis, cl... 39 0.61 BC069870_1(BC069870|pid:none) Mus musculus mindbomb homolog 1 (D... 39 0.61 T45063(T45063)hypothetical protein c316G12.4 [imported] - human ... 39 0.61 AL031709_6(AL031709|pid:none) Human DNA sequence from clone LA16... 39 0.61 AY088137_1(AY088137|pid:none) Arabidopsis thaliana clone 41648 m... 39 0.61 (Q6NRG0) RecName: Full=E3 ubiquitin-protein ligase RNF8 B; ... 39 0.61 (Q9H9P5) RecName: Full=RING finger protein unkempt-like; &AL031... 39 0.61 AK222154_1(AK222154|pid:none) Arabidopsis thaliana gene, similar... 39 0.61 AK080847_1(AK080847|pid:none) Mus musculus adult male corpora qu... 39 0.61 DQ086844_1(DQ086844|pid:none) Arabidopsis thaliana At3g23280 mRN... 39 0.61 AK016133_1(AK016133|pid:none) Mus musculus adult male testis cDN... 39 0.61 AY084466_1(AY084466|pid:none) Arabidopsis thaliana clone 108776 ... 39 0.61 EF125867_54(EF125867|pid:none) Maruca vitrata MNPV, complete gen... 39 0.61 AF303741_333(AF303741|pid:none) Chilo iridescent virus complete ... 39 0.80 AY809270_1(AY809270|pid:none) Schistosoma japonicum SJCHGC08697 ... 39 0.80 FN392322_165(FN392322|pid:none) Pichia pastoris GS115 chromosome... 39 0.80 DQ486030_37(DQ486030|pid:none) Antheraea pernyi nucleopolyhedrov... 39 0.80 (Q8VC56) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 39 0.80 DQ487701_1(DQ487701|pid:none) Arabidopsis thaliana clone 0000010... 39 0.80 AM430945_1(AM430945|pid:none) Vitis vinifera contig VV78X241223.... 39 0.80 AJ850299_1(AJ850299|pid:none) Zea mays m19 gene for putative MAD... 39 0.80 EF207986_82(EF207986|pid:none) Antheraea pernyi nucleopolyhedrov... 39 0.80 FJ882854_60(FJ882854|pid:none) Bombyx mandarina nucleopolyhedrov... 39 0.80 AM270358_20(AM270358|pid:none) Aspergillus niger contig An16c006... 39 0.80 BC123396_1(BC123396|pid:none) Bos taurus leucine rich repeat and... 39 0.80 DQ652799_1(DQ652799|pid:none) Arabidopsis thaliana clone 0000010... 39 0.80 AX104966_1(AX104966|pid:none) Sequence 11 from Patent WO0123568. 39 1.0 EU730893_102(EU730893|pid:none) Helicoverpa armigera multiple nu... 39 1.0 AC007202_20(AC007202|pid:none) Arabidopsis thaliana chromosome 1... 39 1.0 (O76064) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 39 1.0 BC159374_1(BC159374|pid:none) Xenopus tropicalis mex-3 homolog D... 39 1.0 AP004772_13(AP004772|pid:none) Oryza sativa Japonica Group genom... 39 1.0 AK298319_1(AK298319|pid:none) Homo sapiens cDNA FLJ50824 complet... 39 1.0 AM920457_1(AM920457|pid:none) Penicillium chrysogenum Wisconsin ... 39 1.0 CP001325_28(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 39 1.0 AY387483_11(AY387483|pid:none) Oryza sativa (japonica cultivar-g... 39 1.0 CT005266_189(CT005266|pid:none) Leishmania major strain Friedlin... 39 1.0 DQ646522_1(DQ646522|pid:none) Oryza sativa (japonica cultivar-gr... 39 1.0 AM502246_189(AM502246|pid:none) Leishmania infantum chromosome 28. 39 1.0 CU928169_370(CU928169|pid:none) Kluyveromyces thermotolerans str... 39 1.0 AM920439_312(AM920439|pid:none) Penicillium chrysogenum Wisconsi... 39 1.0 AF063866_242(AF063866|pid:none) Melanoplus sanguinipes entomopox... 39 1.0 DQ355836_1(DQ355836|pid:none) Paracentrotus lividus RING finger-... 39 1.0 AM920429_239(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 39 1.0 AX881817_1(AX881817|pid:none) Sequence 16722 from Patent EP10746... 39 1.0 BT054868_1(BT054868|pid:none) Zea mays full-length cDNA clone ZM... 39 1.0 AC118133_21(AC118133|pid:none) Oryza sativa chromosome 3 BAC OSJ... 38 1.4 BT087495_1(BT087495|pid:none) Zea mays full-length cDNA clone ZM... 38 1.4 AK317211_1(AK317211|pid:none) Arabidopsis thaliana AT5G14420 mRN... 38 1.4 (Q9LY87) RecName: Full=E3 ubiquitin-protein ligase RGLG2; ... 38 1.4 FN317626_1(FN317626|pid:none) Schistosoma japonicum isolate Anhu... 38 1.4 AP008216_1337(AP008216|pid:none) Oryza sativa (japonica cultivar... 38 1.4 FN357714_17(FN357714|pid:none) Schistosoma mansoni genome sequen... 38 1.4 AP005177_13(AP005177|pid:none) Oryza sativa Japonica Group genom... 38 1.4 EU976779_1(EU976779|pid:none) Zea mays clone 989988 unknown mRNA. 38 1.4 AB1731(AB1731) hypothetical protein lin2391 [imported] - Listeri... 38 1.4 EU814897_1(EU814897|pid:none) Tetrahymena thermophila Rnf2p (RNF... 38 1.4 AM443219_4(AM443219|pid:none) Vitis vinifera contig VV78X188051.... 38 1.4 AP008213_1048(AP008213|pid:none) Oryza sativa (japonica cultivar... 38 1.4 AB170198_1(AB170198|pid:none) Macaca fascicularis brain cDNA clo... 38 1.4 AM920436_34(AM920436|pid:none) Penicillium chrysogenum Wisconsin... 38 1.4 AC027036_21(AC027036|pid:none) Arabidopsis thaliana chromosome 1... 38 1.4 EU970283_1(EU970283|pid:none) Zea mays clone 343008 inhibitor of... 38 1.4 EF084758_1(EF084758|pid:none) Picea sitchensis clone WS0276_N21 ... 38 1.4 AY850181_1(AY850181|pid:none) Eschscholzia californica AGL2 mRNA... 38 1.8 BT088008_1(BT088008|pid:none) Zea mays full-length cDNA clone ZM... 38 1.8 AM270218_69(AM270218|pid:none) Aspergillus niger contig An11c001... 38 1.8 BT035040_1(BT035040|pid:none) Zea mays full-length cDNA clone ZM... 38 1.8 AM423067_1(AM423067|pid:none) Tribolium castaneum mRNA for KH do... 38 1.8 AM475322_2(AM475322|pid:none) Vitis vinifera contig VV78X237798.... 38 1.8 AP004026_7(AP004026|pid:none) Oryza sativa Japonica Group genomi... 38 1.8 AM778931_30(AM778931|pid:none) Microcystis aeruginosa PCC 7806 g... 38 1.8 DQ069803_1(DQ069803|pid:none) Arabidopsis thaliana hypothetical ... 38 1.8 EU965348_1(EU965348|pid:none) Zea mays clone 285478 copine famil... 38 1.8 AC158501_14(AC158501|pid:none) Medicago truncatula chromosome 2 ... 38 1.8 EU309041_43(EU309041|pid:none) Orgyia leucostigma NPV isolate CF... 38 1.8 AM270219_6(AM270219|pid:none) Aspergillus niger contig An11c0020... 38 1.8 BT022512_1(BT022512|pid:none) Drosophila melanogaster IP11818 fu... 38 1.8 AM494965_200(AM494965|pid:none) Leishmania braziliensis chromoso... 38 1.8 AY084453_1(AY084453|pid:none) Arabidopsis thaliana clone 108568 ... 38 1.8 AP008971_958(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 37 2.3 AP005518_5(AP005518|pid:none) Oryza sativa Japonica Group genomi... 37 2.3 AK091610_1(AK091610|pid:none) Homo sapiens cDNA FLJ34291 fis, cl... 37 2.3 AC007767_31(AC007767|pid:none) Sequence of BAC F5D14 from Arabid... 37 2.3 AL691432_4(AL691432|pid:none) Human DNA sequence from clone RP11... 37 2.3 AM393613_1(AM393613|pid:none) Synthetic construct Homo sapiens c... 37 2.3 AL691432_2(AL691432|pid:none) Human DNA sequence from clone RP11... 37 2.3 AK095914_1(AK095914|pid:none) Homo sapiens cDNA FLJ38595 fis, cl... 37 2.3 AY090954_1(AY090954|pid:none) Arabidopsis thaliana unknown prote... 37 2.3 AJ271919_1(AJ271919|pid:none) Mus musculus partial neurl gene, e... 37 2.3 AB025631_16(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 37 2.3 AK122751_1(AK122751|pid:none) Homo sapiens cDNA FLJ16279 fis, cl... 37 2.3 CP001323_354(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 37 2.3 AY775334_1(AY775334|pid:none) Capsicum annuum RING-finger protei... 37 2.3 BC168076_1(BC168076|pid:none) Xenopus tropicalis cDNA clone MGC:... 37 2.3 (Q923S6) RecName: Full=Neuralized-like protein 1; Short... 37 2.3 AB076693_1(AB076693|pid:none) Homo sapiens mRNA for skeletrophin... 37 2.3 AJ972477_1(AJ972477|pid:none) Medicago truncatula ZFP gene for C... 37 2.3 AL834527_1(AL834527|pid:none) Homo sapiens mRNA; cDNA DKFZp434A0... 37 2.3 AB074480_1(AB074480|pid:none) Homo sapiens mRNA for skeletrophin... 37 2.3
>(Q7M3S9) RecName: Full=RING finger protein B; Short=Protein rngB; Length = 943
Score = 269 bits (688), Expect = 3e-70 Identities = 133/147 (90%), Positives = 133/147 (90%) Frame = +2
Query: 1763 NINRLXXXXXXXXXXXXXXFYFESKIQELSNQLKEKQQAITDRDNKIKDFENQLNKYKLI 1942 NINRL FYFESKIQELSNQLKEKQQAITDRDNKIKDFENQLNKYKLI Sbjct: 786 NINRLSISSNSSTLSSKDSFYFESKIQELSNQLKEKQQAITDRDNKIKDFENQLNKYKLI 845
Query: 1943 GLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPP 2122 GLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPP Sbjct: 846 GLDSLDHYQLLELESSFHNGLKQIGSIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPP 905
Query: 2123 NIVLLPCRHSSLCSDCCSKLTKCPICR 2203 NIVLLPCRHSSLCSDCCSKLTKCPICR Sbjct: 906 NIVLLPCRHSSLCSDCCSKLTKCPICR 932
Score = 167 bits (424), Expect = 1e-39 Identities = 87/105 (82%), Positives = 87/105 (82%) Frame = +3
Query: 1194 PPFNGRXXXXXXXXXXXXXXXXXXQQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLK 1373 PPFNGR QQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLK Sbjct: 530 PPFNGRSSNHNNNNNSNSNNYNNHQQTKTNSAEELILEELKSLNIYDQAACNKDFQTNLK 589
Query: 1374 RVEELFNQKIKHEQKYRQSLEEKLGKANHQVSLLTNQIQSIIQKD 1508 RVEELFNQKIKHEQKYRQSLEEKLGKANHQVSLLTNQIQSIIQKD Sbjct: 590 RVEELFNQKIKHEQKYRQSLEEKLGKANHQVSLLTNQIQSIIQKD 634
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,573,040,611 Number of extensions: 20501511 Number of successful extensions: 62153 Number of sequences better than 10.0: 605 Number of HSP's gapped: 61997 Number of HSP's successfully gapped: 639 Length of query: 739 Length of database: 1,051,180,864 Length adjustment: 136 Effective length of query: 603 Effective length of database: 611,008,840 Effective search space: 368438330520 Effective search space used: 368438330520 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
7 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
2 |
SL (DIR, L) |
2 |
SS (DIR, S) |
6 |
SH (FL, L) |
1 |
SF (FL, S) |
0 |
CH (FL, L) |
2 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |