Contig-U15516-1 |
Contig ID |
Contig-U15516-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
gap included |
Contig length |
3508 |
Chromosome number (1..6, M) |
1 |
Chromosome length |
4919822 |
Start point |
1450338 |
End point |
1447616 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
20 |
Number of EST |
32 |
Link to clone list |
U15516 |
List of clone(s) |
est1=AFA368F,1,928 est2=AFC277F,15,644 est3=AFD369F,19,665 est4=AFC662F,27,539 est5=AFD369Z,682,1429 est6=VFC303F,1430,2013 est7=VHJ237F,1432,1967 est8=VFO752F,1440,1982 est9=SFH420F,1441,1675 est10=SFC631F,1444,1784 est11=SFE274F,1444,1903 est12=VFA259F,1445,2095 est13=VFH105F,1445,1878 est14=VFJ738F,1445,2041 est15=CFF804F,1453,2094 est16=FC-AI05E,1919,3107 est17=VFJ738Z,2291,2975 est18=CFF804Z,2294,2949 est19=AFC662Z,2309,3056 est20=SFC631Z,2359,3084 est21=SFH420Z,2395,3124 est22=VFC303Z,2428,2993 est23=VFA259Z,2436,3118 est24=FC-AU11Z,2537,3107 est25=AFC277Z,2646,3315 est26=CHC392Z,2651,3237 est27=VFD496Z,2727,3329 est28=CHC818Z,2795,2965 est29=AFA368Z,2876,3078 est30=VFH105Z,2921,3264 est31=VHJ237Z,2934,3460 est32=VSC138Z,2982,3500
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 1.30 |
Homology vs DNA |
Query= Contig-U15516-1 (Contig-U15516-1Q) /CSM_Contig/Contig-U15516-1Q.Seq.d (3518 letters)
Database: ddbj_B 98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ410707) Dictyostelium discoideum cDNA clone:ddv1e16, 5' e... 1289 0.0 1 (BJ324715) Dictyostelium discoideum cDNA clone:dda7j17, 5' e... 1275 0.0 1 (BJ358955) Dictyostelium discoideum cDNA clone:ddc12h02, 5' ... 1273 0.0 1 (BJ324344) Dictyostelium discoideum cDNA clone:dda5i20, 5' e... 1245 0.0 1 (BJ341435) Dictyostelium discoideum cDNA clone:dda6k16, 3' e... 1243 0.0 1 (BJ432977) Dictyostelium discoideum cDNA clone:ddv20l09, 3' ... 1211 0.0 2 (BJ414783) Dictyostelium discoideum cDNA clone:ddv20l09, 5' ... 1152 0.0 2 (BJ372314) Dictyostelium discoideum cDNA clone:ddc12h02, 3' ... 1142 0.0 1 (BJ399538) Dictyostelium discoideum cDNA clone:dds6m08, 3' e... 1136 0.0 1 (BJ411599) Dictyostelium discoideum cDNA clone:ddv5f01, 5' e... 1126 0.0 2 (C23707) Dictyostelium discoideum gamete cDNA, clone FC-AI05. 1084 0.0 2 (BJ400850) Dictyostelium discoideum cDNA clone:dds15h06, 3' ... 1072 0.0 1 (BJ423483) Dictyostelium discoideum cDNA clone:ddv49i10, 5' ... 1057 0.0 1 (BJ417427) Dictyostelium discoideum cDNA clone:ddv30h13, 5' ... 1035 0.0 1 (BJ324508) Dictyostelium discoideum cDNA clone:dda6k16, 5' e... 1017 0.0 1 (BJ325603) Dictyostelium discoideum cDNA clone:dda1h17, 5' e... 999 0.0 1 (BJ428875) Dictyostelium discoideum cDNA clone:ddv1e16, 3' e... 690 0.0 2 (BJ341661) Dictyostelium discoideum cDNA clone:dda7j17, 3' e... 839 0.0 2 (BJ429837) Dictyostelium discoideum cDNA clone:ddv5f01, 3' e... 938 0.0 2 (BJ388481) Dictyostelium discoideum cDNA clone:dds9c20, 5' e... 908 0.0 1 (BJ413328) Dictyostelium discoideum cDNA clone:ddv15i01, 5' ... 858 0.0 1 (AU284424) Dictyostelium discoideum gamete cDNA clone:FC-AU1... 789 0.0 1 (BJ388606) Dictyostelium discoideum cDNA clone:dds6m08, 5' e... 654 0.0 1 (BJ341252) Dictyostelium discoideum cDNA clone:dda5i20, 3' e... 569 e-157 1 (BJ378032) Dictyostelium discoideum cDNA clone:ddc26h23, 3' ... 565 e-156 1 (BJ391105) Dictyostelium discoideum cDNA clone:dds15h06, 5' ... 426 e-114 1 (BJ430614) Dictyostelium discoideum cDNA clone:ddv7p24, 3' e... 347 2e-90 1 (BJ378078) Dictyostelium discoideum cDNA clone:ddc27d06, 3' ... 214 2e-50 1 (AU262359) Dictyostelium discoideum vegetative cDNA clone:VS... 155 1e-32 1 (DY893043) CeleSEQ12208 Cunninghamella elegans pBluescript (... 105 1e-29 3 (DY893970) CeleSEQ13439 Cunninghamella elegans pBluescript (... 105 6e-28 2 (FE243241) CAPG7550.fwd CAPG Naegleria gruberi amoeba stage ... 60 7e-22 5 (FE242880) CAPG7378.fwd CAPG Naegleria gruberi amoeba stage ... 60 8e-22 5 (FE246664) CAPG9539.fwd CAPG Naegleria gruberi amoeba stage ... 60 9e-22 5 (FE246220) CAPG9304.fwd CAPG Naegleria gruberi amoeba stage ... 60 1e-21 5 (FE245544) CAPG8934.fwd CAPG Naegleria gruberi amoeba stage ... 60 1e-21 5 (FE233925) CAPG2543.fwd CAPG Naegleria gruberi amoeba stage ... 60 1e-21 5 (FE234154) CAPG2668.fwd CAPG Naegleria gruberi amoeba stage ... 60 4e-20 5 (BJ342788) Dictyostelium discoideum cDNA clone:dda1h17, 3' e... 113 5e-20 1 (FE246611) CAPG9510.fwd CAPG Naegleria gruberi amoeba stage ... 60 2e-19 5 (FE239635) CAPG5463.fwd CAPG Naegleria gruberi amoeba stage ... 60 1e-18 4 (FE231162) CAPG10251.fwd CAPG Naegleria gruberi amoeba stage... 60 2e-18 4 (BI500956) kx26b07.y1 Parastrongyloides trichosuri PA pAMP1 ... 66 2e-16 3 (FE260076) CAZN1019.fwd CAZN Naegleria gruberi Flagellate St... 50 9e-16 5 (DR775564) BAAC-PNP1249C02.g1 C.remanei EST SB146 Caenorhabd... 72 1e-15 2 (BJ402199) Dictyostelium discoideum cDNA clone:dds20f21, 3' ... 74 7e-14 4 (BJ372800) Dictyostelium discoideum cDNA clone:ddc14o05, 3' ... 74 7e-14 4 (BJ428302) Dictyostelium discoideum cDNA clone:ddv11o07, 3' ... 74 6e-13 3 (FF100045) CPAD-aac58a06.b1 PB2801_EST_CPAD1 Caenorhabditis ... 70 1e-12 2 (FE246610) CAPG9510.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE246663) CAPG9539.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE245543) CAPG8934.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE260075) CAZN1019.rev CAZN Naegleria gruberi Flagellate St... 50 2e-12 3 (FE242879) CAPG7378.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE246219) CAPG9304.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE234153) CAPG2668.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE243240) CAPG7550.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE257143) CAPH6471.fwd CAPH Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE257142) CAPH6471.rev CAPH Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE233924) CAPG2543.rev CAPG Naegleria gruberi amoeba stage ... 50 2e-12 3 (FE231161) CAPG10251.rev CAPG Naegleria gruberi amoeba stage... 50 2e-12 3 (FE264453) CAZO3883.fwd CAZO Naegleria gruberi Flagellate St... 50 2e-12 3 (FE264452) CAZO3883.rev CAZO Naegleria gruberi Flagellate St... 50 2e-12 3 (FF101967) CPAD-aab91h12.b1 PB2801_EST_CPAD1 Caenorhabditis ... 68 4e-12 2 (BJ432638) Dictyostelium discoideum cDNA clone:ddv19d07, 3' ... 74 4e-12 2 (BJ434626) Dictyostelium discoideum cDNA clone:ddv24p11, 3' ... 74 4e-12 2 (AL426851) clone BA0AB015E02 of library BA0AB from strain CL... 46 8e-12 5 (FE258429) CAPH714.fwd CAPH Naegleria gruberi amoeba stage N... 60 8e-12 4 (FE338679) CAOF1078.rev CAOF_Daphnia_pulex_Log50_Library_12 ... 86 1e-11 1 (FE288285) CANH4684.fwd CANH_Daphnia_pulex_Log50_Library_21 ... 86 1e-11 1 (FE288284) CANH4684.rev CANH_Daphnia_pulex_Log50_Library_21 ... 86 1e-11 1 (GE438326) 294581744 Nasonia vitripennis Adult Male Nasonia ... 72 1e-11 2 (GE375503) 292315332 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-11 2 (GE375049) 292313964 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-11 2 (GE385634) 293699787 Nasonia vitripennis Female Pupae Nasoni... 72 2e-11 2 (BJ430311) Dictyostelium discoideum cDNA clone:ddv6e24, 3' e... 66 2e-11 4 (AM672873) Entamoeba terrapinae GSS, clone terra245f03.q1k. 60 2e-11 4 (FF143577) TMAB-aab66d06.g1 T.muris_TMAB_EST_pSMART Trichuri... 74 6e-11 2 (FE258428) CAPH714.rev CAPH Naegleria gruberi amoeba stage N... 50 9e-11 3 (DY885769) CeleSEQ1196 Cunninghamella elegans pBluescript (E... 62 4e-10 4 (FE239634) CAPG5463.rev CAPG Naegleria gruberi amoeba stage ... 50 1e-09 3 (FE416380) CBTW1882.rev CBTW_Daphnia_pulex_Chosen_One_Librar... 78 3e-09 1 (FE377337) CBNS2596.rev CBNS_Daphnia_pulex_Chosen_One_Librar... 78 3e-09 1 (FE282542) CANH1298.fwd CANH_Daphnia_pulex_Log50_Library_21 ... 78 3e-09 1 (FE282541) CANH1298.rev CANH_Daphnia_pulex_Log50_Library_21 ... 78 3e-09 1 (DW260300) UI-S-GG1-abc-a-14-0-UI.s1 UI-S-GG1 Euprymna scolo... 56 3e-09 2 (DW258634) UI-S-GG1-aba-e-17-0-UI.s1 UI-S-GG1 Euprymna scolo... 56 3e-09 2 (ES796343) UFL_509_03 Cotton fiber 0-10 day post anthesis Go... 48 7e-09 3 (BY931391) Bombyx mori cDNA, clone:E_EL_ovS0_22H09_R_0, 3' e... 44 8e-09 4 (AM265616) Beta vulgaris mRNA for matrix attachment region b... 48 1e-08 4 (FE667442) UAHYP_27B_F_B01 UaHyphae_ARS Uromyces appendicula... 54 1e-08 3 (EH682797) CCIL7491.b1_E02.ab1 CCI(LMS) chicory Cichorium in... 44 2e-08 3 (EH678017) CCIL3022.b1_L12.ab1 CCI(LMS) chicory Cichorium in... 44 2e-08 3 (EH702405) CCIS14410.b1_C04.ab1 CCI(LMS) chicory Cichorium i... 44 2e-08 3 (BM415286) OP20358 Mixed Stage EST's from Globodera pallida,... 50 2e-08 3 (BM415380) OP20454 Mixed Stage EST's from Globodera pallida,... 50 3e-08 3 (CU441579) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 4e-08 4 (ES818616) UFL_292_65 Cotton fiber 0-10 day post anthesis Go... 48 5e-08 2 (CO090155) GR__Ea09P18.f GR__Ea Gossypium raimondii cDNA clo... 48 5e-08 2 (ES843784) UFL_103_69 Cotton fiber 0-10 day post anthesis Go... 48 5e-08 2 (ES846168) UFL_130_48 Cotton fiber 0-10 day post anthesis Go... 48 5e-08 2 (ES848694) UFL_651_82 Cotton fiber 0-10 day post anthesis Go... 48 5e-08 2 (CO106967) GR__Eb0037N22.r GR__Eb Gossypium raimondii cDNA c... 48 5e-08 2 (ES827554) UFL_406_78 Cotton fiber 0-10 day post anthesis Go... 48 5e-08 2 (EV133003) 0167130 Brassica napus Flower Brassica napus cDNA... 66 5e-08 2 (FG607522) stem_S023_H09.SEQ Opium poppy stem cDNA library P... 50 7e-08 3 (BZ300873) KD0966.p1 Kluyveromyces delphensis Random Genomic... 54 8e-08 3 (EH012821) USDA-FP_185683 Lysiphlebus testaceipes adult whol... 54 1e-07 4 (GE550420) CCHS9195.b1_F20.ab1 CCHS Espina Barnadesia spinos... 44 1e-07 3 (ES634694) NVPAV64TR NVPA Nasonia vitripennis cDNA, mRNA seq... 72 2e-07 1 (DT933605) BAAC-PNP1275A08.g1 C.remanei EST SB146 Caenorhabd... 72 2e-07 1 (DR779727) BAAC-PNP1260M06.g1 C.remanei EST SB146 Caenorhabd... 72 2e-07 1 (GE459026) 294617135 Nasonia vitripennis Adult Female Nasoni... 72 2e-07 1 (GE438079) 294579551 Nasonia vitripennis Adult Male Nasonia ... 72 2e-07 1 (GE430455) 294522390 Nasonia vitripennis Adult Male Nasonia ... 72 2e-07 1 (GE426826) 294517277 Nasonia vitripennis Adult Male Nasonia ... 72 2e-07 1 (GE424160) 294512930 Nasonia vitripennis Adult Male Nasonia ... 72 2e-07 1 (GE418441) 294502980 Nasonia vitripennis Adult Male Nasonia ... 72 2e-07 1 (GE411017) 293822397 Nasonia vitripennis Female Pupae Nasoni... 72 2e-07 1 (GE381567) 292378079 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE376465) 292317454 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE373043) 292309535 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE367167) 292294339 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE366263) 292292894 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE366070) 292293036 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE363222) 292286954 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE353932) 289178599 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (GE353022) 289160819 Nasonia vitripennis Male Pupae Nasonia ... 72 2e-07 1 (BF272769) GA__Eb0015N21f Gossypium arboreum 7-10 dpa fiber ... 48 2e-07 3 (CN463598) 6701.2 After-Cooking Darkening A Solanum tuberosu... 56 2e-07 2 (AW906350) EST342472 potato stolon, Cornell University Solan... 56 2e-07 2 (BG887692) EST513543 cSTD Solanum tuberosum cDNA clone cSTD6... 56 2e-07 2 (DB919384) Idiosepius paradoxus cDNA, clone:Ip_aB_035_A08, 5... 54 2e-07 2 (CV302403) 74379.1 Swollen Stolon Solanum tuberosum cDNA clo... 56 2e-07 2 (BG596807) EST495485 cSTS Solanum tuberosum cDNA clone cSTS1... 56 2e-07 2 (BG597726) EST496404 cSTS Solanum tuberosum cDNA clone cSTS1... 56 2e-07 2 (BG597055) EST495733 cSTS Solanum tuberosum cDNA clone cSTS1... 56 2e-07 2 (BG592860) EST491538 cSTS Solanum tuberosum cDNA clone cSTS2... 56 2e-07 2 (DN939726) 6701.3 After-Cooking Darkening A Solanum tuberosu... 56 2e-07 2 (FG075388) UI-FF-IF0-abl-k-08-0-UI.r1 Ceratitis capitata emb... 44 4e-07 4 (GE467520) 294771417 Nasonia vitripennis Adult Female Nasoni... 70 6e-07 1 (EB642459) ZM_BFb0332M20.r ZM_BFb Zea mays cDNA 5', mRNA seq... 50 7e-07 2 (DN560689) ME15-F09-T3-96-R1 E7PCR Zea mays cDNA clone E7PCR... 50 7e-07 2 (CO442350) MZCCL10042D07.g Maize Endosperm cDNA Library Zea ... 50 7e-07 2 (DY688794) ZM_BFb0284C20.r ZM_BFb Zea mays cDNA 5', mRNA seq... 50 7e-07 2 (DW272634) UI-S-GS1-aco-m-07-0-UI.s1 UI-S-GS1 Euprymna scolo... 48 7e-07 2 (DY396637) III-952-8D-A01.M13-R UGIII-Reseq Zea mays cDNA, m... 50 7e-07 2 (BU050617) 1111031A01.y1 1111 - Unigene III from Maize Genom... 50 7e-07 2 (CO527610) 3530_1_182_1_G09.y_1 3530 - Full length cDNA libr... 50 7e-07 2 (CF050373) QCM11e02.yg QCM Zea mays cDNA clone QCM11e02, mRN... 50 7e-07 2 (AI812234) 605087D01.y1 605 - Endosperm cDNA library from Sc... 50 7e-07 2 (CF037154) QCG41d07.yg QCG Zea mays cDNA clone QCG41d07, mRN... 50 7e-07 2 (FL011252) 1733978 CERES-226 Zea mays cDNA clone 386257 5', ... 50 7e-07 2 (EY604292) CAWU7450.fwd CAWU Capitella sp. I ECS-2004 Primar... 52 8e-07 2 (EY568139) CAWU10406.fwd CAWU Capitella sp. I ECS-2004 Prima... 52 8e-07 2 (EY539299) CAWT11372.fwd CAWT Capitella sp. I ECS-2004 Prima... 52 8e-07 2 (FD453975) EGGAR35TR Haematobia irritans eggs Haematobia irr... 46 9e-07 3 (EY570854) CAWU11732.fwd CAWU Capitella sp. I ECS-2004 Prima... 52 9e-07 2 (AC208903) Zea mays chromosome 2 clone CH201-204H5; ZMMBBc02... 48 2e-06 2 (AC208520) Zea mays chromosome 9 clone CH201-191K17; ZMMBBc0... 48 2e-06 2 (AC207269) Zea mays chromosome 9 clone CH201-219C16; ZMMBBc0... 48 2e-06 2 (GE420930) 294508078 Nasonia vitripennis Adult Male Nasonia ... 68 2e-06 1 (FF097254) CPAD-aac61g02.b1 PB2801_EST_CPAD1 Caenorhabditis ... 68 2e-06 1 (BG593908) EST492586 cSTS Solanum tuberosum cDNA clone cSTS5... 56 3e-06 2 (CA077157) SCQGAM1048E08.g AM1 Saccharum officinarum cDNA cl... 44 3e-06 2 (CG851084) ZMMBBb0338F07.f ZMMBBb Zea mays subsp. mays genom... 48 3e-06 2 (CG054922) PUIMJ45TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 48 3e-06 2 (BZ368405) Cot466.1.F01.T3 Maize Cot466 library Zea mays gen... 48 3e-06 2 (CA188223) SCCCAM1C04E12.g AM1 Saccharum officinarum cDNA cl... 44 3e-06 2 (CA208429) SCMCSB1116A02.g SB1 Saccharum officinarum cDNA cl... 44 3e-06 2 (BM325848) PIC1_53_E10.b1_A002 Pathogen-infected compatible ... 44 3e-06 2 (BG355744) EM1_19_A03.b1_A002 Embryo 1 (EM1) Sorghum bicolor... 44 3e-06 2 (BG649508) EM1_80_C02.b1_A002 Embryo 1 (EM1) Sorghum bicolor... 44 3e-06 2 (EV202364) 0103517 Brassica napus Cold acclimation - light B... 60 3e-06 2 (EX557032) AIAE-aaa99h09.g1 Ancylostoma_caninum_EST_Female_p... 48 3e-06 4 (AC225925) Oryza officinalis clone OO__Ba0128D16, *** SEQUEN... 46 4e-06 9 (ES792294) UFL_570_05 Cotton fiber 0-10 day post anthesis Go... 40 5e-06 4 (EX557560) AIAE-aaa99h09.b1 Ancylostoma_caninum_EST_Female_p... 48 5e-06 4 (ES799778) UFL_531_38 Cotton fiber 0-10 day post anthesis Go... 40 7e-06 4 (DL173608) Methods for Identifying the Target of a Compound ... 46 7e-06 3 (AX489168) Sequence 6468 from Patent WO02053728. 46 7e-06 3 (ES818124) UFL_290_48 Cotton fiber 0-10 day post anthesis Go... 40 7e-06 4 (FF601862) Le_emcl1_12M06_M13Reverse Little Skate (Leucoraja... 40 8e-06 3 (CR382139) Debaryomyces hansenii strain CBS767 chromosome G ... 66 1e-05 1 (BH515716) BOGFZ76TR BOGF Brassica oleracea genomic clone BO... 66 1e-05 1 (BH658939) BOMFE39TR BO_2_3_KB Brassica oleracea genomic clo... 66 1e-05 1 (EH017072) USDA-FP_189509 Lysiphlebus testaceipes adult whol... 66 1e-05 1 (EH015573) USDA-FP_188160 Lysiphlebus testaceipes adult whol... 66 1e-05 1 (EE412033) 55ACACPE_UP_028_C12_15DEC2004_092 Brassica napus ... 66 1e-05 1 (DY022142) 63JKCOT5_T3_026_F01_24JAN2005_005 63JKCOT5 Brassi... 66 1e-05 1 (EV202270) 0103423 Brassica napus Cold acclimation - light B... 66 1e-05 1 (EV018933) BNSCS2CT_UP_042_C12_17APR2007_092 Brassica napus ... 66 1e-05 1 (ES959102) 9RDBNGA_UP_187_H07_13SEPT2006_049 Brassica napus ... 66 1e-05 1 (EW742015) AIAE-aaa01b11.g1 Ancylostoma_caninum_EST_Female_p... 46 1e-05 3 (AK073164) Oryza sativa Japonica Group cDNA clone:J033023B01... 50 1e-05 2 (CT832034) Oryza sativa (indica cultivar-group) cDNA clone:O... 50 1e-05 2 (BX928821) Oryza sativa cDNA clone:y825e02p5. 50 1e-05 2 (CW329354) 104_825_11479800_148_36004_082 Sorghum methylatio... 44 1e-05 2 (CW145498) 104_538_11138499_116_34976_014 Sorghum methylatio... 44 1e-05 2 (CW329353) 104_825_11479800_116_36003_082 Sorghum methylatio... 44 1e-05 2 (BM324314) PIC1_26_G11.b1_A002 Pathogen-infected compatible ... 42 1e-05 2 (D15098) Oryza sativa Japonica Group cDNA, partial sequence ... 50 1e-05 2 (CI625130) Oryza sativa Japonica Group cDNA, clone: J04B3005... 50 1e-05 2 (BC065674) Danio rerio nucleolar protein 5, mRNA (cDNA clone... 38 1e-05 4 (BC044394) Danio rerio nucleolar protein 5, mRNA (cDNA clone... 38 1e-05 4 (CU440719) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 38 1e-05 5 (BC155194) Danio rerio nucleolar protein 5, mRNA (cDNA clone... 38 1e-05 4 (EH012007) USDA-FP_184950 Lysiphlebus testaceipes adult whol... 54 2e-05 3 (EV499337) sg162D02 Cotton Lambda Zap Express Library Gossyp... 40 3e-05 4 (AP008209) Oryza sativa (japonica cultivar-group) genomic DN... 50 3e-05 2 (BC151884) Danio rerio nucleolar protein 5, mRNA (cDNA clone... 38 3e-05 4 (AY648816) Danio rerio NOP5/NOP58 mRNA, complete cds. 38 3e-05 4 (BC061961) Danio rerio nucleolar protein 5, mRNA (cDNA clone... 38 3e-05 4 (DV158549) KG9B.003O24F.050720T7 KG9B Nicotiana tabacum cDNA... 50 3e-05 3 (AC210445) Oryza glaberrima clone OG_BBa0009C02, *** SEQUENC... 50 3e-05 2 (AC135257) Genomic sequence for Oryza sativa, Nipponbare str... 50 3e-05 2 (EA694713) Sequence 73592 from patent US 7365185. 50 3e-05 2 (EX954534) IF1_34_B09_A067.b1 Iris fulva EST Library IF1 Iri... 54 3e-05 2 (CB086198) hj81d03.g1 Hedyotis centranthoides flower - Stage... 50 4e-05 4 (GE386695) 293708924 Nasonia vitripennis Female Pupae Nasoni... 64 4e-05 1 (AR547367) Sequence 2498 from patent US 6747137. 46 4e-05 2 (CA253525) SCRLFL4102A03.g FL4 Saccharum officinarum cDNA cl... 42 4e-05 2 (BU791036) 81DHB10/2gg male flower bud cucumber cDNA DH B10/... 48 4e-05 2 (DR125154) 49111014 Drosophila pseudoobscura embryonic cDNA ... 60 6e-05 2 (BE340464) EST344537 potato stolon, Cornell University Solan... 42 1e-04 5 (DJ025880) Genome-wide DNA marker of Saccharomyces cerevisiae. 44 1e-04 2 (U14913) Saccharomyces cerevisiae chromosome XII cosmid 8167. 44 1e-04 2 (EE451464) BNBS2DCT_UP_006_A09_11MAR2005_079 Brassica napus ... 54 1e-04 2 (U20237) Saccharomyces cerevisiae Sik1p (SIK1) gene, complet... 44 1e-04 2 (FG195132) AGN_PNL222df1_d5.trimmed.seq AGN_PNL Nicotiana ta... 56 1e-04 2 (EF059284) Synthetic construct Saccharomyces cerevisiae clon... 44 1e-04 2 (AX830834) Sequence 1554 from Patent WO03072602. 44 1e-04 2 (AX819804) Sequence 1554 from Patent EP1338608. 44 1e-04 2 (AX595624) Sequence 1278 from Patent EP1258494. 44 1e-04 2 (DV519769) ZM_BFb0204F11.r ZM_BFb Zea mays cDNA 5', mRNA seq... 42 1e-04 2 (DV516923) ZM_BFb0200E04.f ZM_BFb Zea mays cDNA 3', mRNA seq... 42 1e-04 2 (CN585192) USDA-FP_128262 Acyrthosiphon pisum, Pea Aphid Acy... 46 1e-04 2 (EL439894) CHTM15359.b1_N24.ab1 CHT(LMS) Jerusalem artichoke... 48 1e-04 2 (DJ134109) Method for identification of useful proteins deri... 44 1e-04 2 (DR829262) ZM_BFb0075A11.r ZM_BFb Zea mays cDNA 5', mRNA seq... 42 1e-04 2 (FF312524) 279385343 Pea aphid whole body normalized full le... 46 1e-04 2 (FF313835) 279390631 Pea aphid whole body normalized full le... 46 1e-04 2 (CN585289) USDA-FP_128359 Acyrthosiphon pisum, Pea Aphid Acy... 46 1e-04 2 (DN205132) MEST814_F08.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 50 1e-04 2 (DV740810) ID0AFF2CA10CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 46 1e-04 2 (CF035407) QCG18a08.yg QCG Zea mays cDNA clone QCG18a08, mRN... 42 2e-04 2 (CF036280) QCG2b01.yg QCG Zea mays cDNA clone QCG2b01, mRNA ... 42 2e-04 2 (BM736450) 952051A02.x1 952 - BMS tissue from Walbot Lab (re... 42 2e-04 2 (CF036064) QCG26h05.yg QCG Zea mays cDNA clone QCG26h05, mRN... 42 2e-04 2 (BU080243) 946151B05.y1 946 - tassel primordium prepared by ... 42 2e-04 2 (FH063191) CHO_OF3019xp20r1.ab1 CHO_OF3 Nicotiana tabacum ge... 62 2e-04 1 (EB441372) KN6B.109A02F.060106T7 KN6B Nicotiana tabacum cDNA... 62 2e-04 1 (DW272645) UI-S-GS1-aco-o-15-0-UI.s1 UI-S-GS1 Euprymna scolo... 62 2e-04 1 (FG200405) AGN_PNL230af1_d8.trimmed.seq AGN_PNL Nicotiana ta... 62 2e-04 1 (FG197900) AGN_PNL226cf1_h8.trimmed.seq AGN_PNL Nicotiana ta... 62 2e-04 1 (FG192740) AGN_PNL219cf1_b8.trimmed.seq AGN_PNL Nicotiana ta... 62 2e-04 1 (FG143924) AGN_RPC017xg08f1.ab1 AGN_RPC Nicotiana tabacum cD... 62 2e-04 1 (FG141466) AGN_RPC025xp01f1.ab1 AGN_RPC Nicotiana tabacum cD... 62 2e-04 1 (FG139737) AGN_ELP023xo05f1.ab1 AGN_ELP Nicotiana tabacum cD... 62 2e-04 1 (FG134929) AGN_ELP012xm04f1.ab1 AGN_ELP Nicotiana tabacum cD... 62 2e-04 1 (EB679499) KG9B.107G23F.060120T7 KG9B Nicotiana tabacum cDNA... 50 2e-04 2 (EB075151) TverSEQ5464 Trametes versicolor pBluescript (EcoR... 36 2e-04 3 (FC004147) CATH9673.fwd CATH Sporobolomyces roseus IAM 13481... 48 2e-04 2 (CN179949) AGENCOURT_21411794 NIH_ZGC_5 Danio rerio cDNA clo... 38 3e-04 4 (DY890355) CeleSEQ9335 Cunninghamella elegans pBluescript (E... 54 3e-04 3 (EL373756) CFFM10989.b1_I12.ab1 CFF(LMS) safflower Carthamus... 40 4e-04 3 (DW058665) CLLY11294.b1_L15.ab1 CLL(XYZ) lettuce saligna Lac... 42 4e-04 3 (AB059832) Nicotiana tabacum MARBPF mRNA for MAR-binding pro... 56 4e-04 2 (EH010515) USDA-FP_183606 Lysiphlebus testaceipes adult whol... 54 4e-04 2 (BG600183) EST505078 cSTS Solanum tuberosum cDNA clone cSTS2... 42 4e-04 5 (CU430947) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 4e-04 3 (BF427508) df89b12.y1 Xenopus laevis oocyte non normalized X... 54 4e-04 2 (CU429152) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 4e-04 3 (AC215533) Oryza punctata clone OP__Ba0019D11, *** SEQUENCIN... 40 5e-04 2 (AC194480) Zea mays chromosome 1 clone CH201-105E1; ZMMBBc01... 40 5e-04 2 (AC187158) Zea mays chromosome 6 clone CH201-241O1; ZMMBBc02... 40 5e-04 2 (AC205704) Zea mays chromosome 1 clone CH201-401J6; ZMMBBc04... 40 5e-04 2 (BG578198) de93h08.y1 Wellcome CRC pRN3 St19 26 Xenopus laev... 54 5e-04 2 (AC229917) Oryza minuta clone OM__Ba0054H06, complete sequence. 40 5e-04 2 (AC232152) Oryza minuta clone OM__Ba0098C15, *** SEQUENCING ... 46 5e-04 2 (FC069685) sT7aVVM025I16056 VVM Vitis vinifera cDNA clone VV... 48 5e-04 2 (DC127308) Xenopus laevis NBRP cDNA clone:xl314e01, 5' end. 54 5e-04 2 (DC047577) Xenopus laevis NBRP cDNA clone:xlk137d03ex, 5' end. 54 5e-04 2 (DB687191) Solanum lycopersicum cDNA, clone: LEFL1029AF08, 5... 56 5e-04 2 (FC069482) sT7aVVM024O16050 VVM Vitis vinifera cDNA clone VV... 48 5e-04 2 (AW906668) EST342790 potato stolon, Cornell University Solan... 56 5e-04 2 (DC105547) Xenopus laevis NBRP cDNA clone:xl239h07, 5' end. 54 5e-04 2 (FE338680) CAOF1078.fwd CAOF_Daphnia_pulex_Log50_Library_12 ... 54 5e-04 2 (DC131036) Xenopus laevis NBRP cDNA clone:xl326k01, 5' end. 54 5e-04 2 (DC108554) Xenopus laevis NBRP cDNA clone:xl249f23, 5' end. 54 6e-04 2 (FC064443) sT7aVVM009P08018 VVM Vitis vinifera cDNA clone VV... 48 6e-04 2 (DC116612) Xenopus laevis NBRP cDNA clone:xl276k23, 5' end. 54 6e-04 2 (DC119023) Xenopus laevis NBRP cDNA clone:xl285h06, 5' end. 54 6e-04 2 (FF599581) Le_emcl1_11C05_M13Reverse Little Skate (Leucoraja... 40 6e-04 2 (BP694768) Xenopus laevis NBRP cDNA clone:XL475i09ex, 5' end. 54 6e-04 2 (FF600047) Le_emcl1_13C05_M13Reverse Little Skate (Leucoraja... 40 6e-04 2 (DC117894) Xenopus laevis NBRP cDNA clone:xl281c21, 5' end. 54 6e-04 2 (EE992599) Le_emtis_409H08_M13R29 Little skate (Leucoraja er... 40 6e-04 2 (CO051216) Le_mx0_24e02_SP6 Little Skate Multiple Tissues, N... 40 6e-04 2 (EE988454) Le_emtis_111O03_M13R29 Little skate (Leucoraja er... 40 6e-04 2 (DT378620) Le_lv0_43d01_SP6 Little Skate Liver, Normalized L... 40 6e-04 2 (DT378574) Le_lv0_42g10_SP6 Little Skate Liver, Normalized L... 40 6e-04 2 (DT046147) Le_lv0_38e09_SP6 Little Skate Liver, Normalized L... 40 6e-04 2 (DC115796) Xenopus laevis NBRP cDNA clone:xl273n12, 5' end. 54 6e-04 2 (DC100593) Xenopus laevis NBRP cDNA clone:xl223e21, 5' end. 54 6e-04 2 (BZ667292) PUBHX81TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 40 6e-04 2 (DB690074) Solanum lycopersicum cDNA, clone: LEFL1037DH08, 5... 56 6e-04 2 (BP709375) Xenopus laevis NBRP cDNA clone:XL497k15ex, 5' end. 54 6e-04 2 (CF285757) AGENCOURT_15182735 NICHD_XGC_Emb4 Xenopus laevis ... 54 6e-04 2 (EE103052) SBB02757 Inflorescence (VvS11) Vitis vinifera cDN... 54 6e-04 2 (BP696792) Xenopus laevis NBRP cDNA clone:XL480i07ex, 5' end. 54 6e-04 2 (DC054557) Xenopus laevis NBRP cDNA clone:xlk61a15ex, 5' end. 54 6e-04 2 (BP698911) Xenopus laevis NBRP cDNA clone:XL486c06ex, 5' end. 54 6e-04 2 (DR155191) 49247476 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR154532) 49097397 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR153656) 49296693 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR153174) 49165817 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR151717) 49243113 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR150597) 49222241 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR150593) 49111295 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR149948) 49317115 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR149494) 49430008 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR148793) 49079484 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR147934) 49326058 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR147586) 49417349 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR146974) 49109692 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR145798) 49061942 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR144617) 49065372 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR144271) 49300524 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR144221) 49300881 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR142863) 49111110 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR141560) 49178685 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR141533) 49169373 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR141397) 49077460 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR141340) 49330262 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR140733) 49335588 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR138420) 49097036 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DR136015) 49221556 Drosophila pseudoobscura embryonic cDNA ... 60 6e-04 1 (DB621403) Halocynthia roretzi cDNA clone:mae29k18, 3' end. 60 6e-04 1 (DB620128) Halocynthia roretzi cDNA clone:mae23c14, 3' end. 60 6e-04 1 (DB593293) Halocynthia roretzi cDNA clone:ma306i02, 3' end. 60 6e-04 1 (FD543746) RR2FO91TF RR2(MS) Raphanus raphanistrum subsp. ra... 60 6e-04 1 (DC053950) Xenopus laevis NBRP cDNA clone:xlk4b10ex, 5' end. 54 6e-04 2 (EB075444) TverSEQ5899 Trametes versicolor pBluescript (EcoR... 36 6e-04 3 (BP705323) Xenopus laevis NBRP cDNA clone:XL514j04ex, 5' end. 54 6e-04 2 (CD302782) AGENCOURT_14236565 NICHD_XGC_Brn1 Xenopus laevis ... 54 7e-04 2 (DN981396) SV6_36H11_092 SV6 Solanum chacoense cDNA, mRNA se... 56 7e-04 2 (BQ735031) AGENCOURT_8216537 NICHD_XGC_Emb4 Xenopus laevis c... 54 7e-04 2 (DC062928) Xenopus laevis NBRP cDNA clone:xlk156f09ex, 5' end. 54 7e-04 2 (DC063915) Xenopus laevis NBRP cDNA clone:xlk159h17ex, 5' end. 54 7e-04 2 (BU906658) AGENCOURT_10465077 NICHD_XGC_Emb1 Xenopus laevis ... 54 7e-04 2 (BQ731972) AGENCOURT_8226844 NICHD_XGC_Emb4 Xenopus laevis c... 54 7e-04 2 (BZ300722) KD0883.p1 Kluyveromyces delphensis Random Genomic... 54 7e-04 3 (DT159066) JGI_ANNO35476.fwd ANNO Pimephales promelas Whole ... 38 8e-04 4 (DT180579) JGI_ANNO47958.fwd ANNO Pimephales promelas Whole ... 38 8e-04 4 (DT160223) JGI_ANNO36131.fwd ANNO Pimephales promelas Whole ... 38 8e-04 4 (DT109017) JGI_ANNO35.fwd ANNO Pimephales promelas Whole (M)... 38 8e-04 4 (DT142233) JGI_ANNO19782.fwd ANNO Pimephales promelas Whole ... 38 9e-04 4 (DT148559) JGI_ANNO28512.fwd ANNO Pimephales promelas Whole ... 38 9e-04 4 (DT183137) JGI_ANNO49426.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT160195) JGI_ANNO36116.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT136816) JGI_ANNO16670.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT178498) JGI_ANNO46762.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT145851) JGI_ANNO26865.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT311435) JGI_CAAX2369.fwd CAAX Pimephales promelas testis ... 38 0.001 4 (DT162982) JGI_ANNO37756.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT147570) JGI_ANNO27931.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT345765) JGI_CAAX9548.fwd CAAX Pimephales promelas testis ... 38 0.001 4 (DT164035) JGI_ANNO38361.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT307315) JGI_CAAW14218.fwd CAAW Pimephales promelas testis... 38 0.001 4 (DT174806) JGI_ANNO44611.fwd ANNO Pimephales promelas Whole ... 38 0.001 4 (DT351964) JGI_CABS1094.fwd CABS Pimephales promelas kidney ... 38 0.001 4 (BC044082) Xenopus laevis similar to nucleolar protein NOP5/... 54 0.001 2 (BC041223) Xenopus laevis similar to nucleolar protein NOP5/... 54 0.001 2 (BC130063) Xenopus laevis similar to nucleolar protein NOP5/... 54 0.001 2 (BC160690) Xenopus laevis cDNA clone IMAGE:6631682, partial ... 54 0.001 2 (BC106291) Xenopus laevis similar to nucleolar protein NOP5/... 54 0.001 2 (BM067138) KS07022B05 KS07 Capsicum annuum cDNA, mRNA sequence. 58 0.002 2 (CT745406) Paramecium tetraurelia 5-PRIME EST from clone LK0... 40 0.002 3 (BG598110) EST496788 cSTS Solanum tuberosum cDNA clone cSTS2... 56 0.002 2 (EY318020) CAWX6171.fwd CAWX Helobdella robusta Primary Earl... 40 0.002 2 (EY292601) CAWX10643.fwd CAWX Helobdella robusta Primary Ear... 40 0.002 2 (FE375378) CBNP636.rev CBNP_Daphnia_pulex_Chosen_One_Library... 48 0.002 2 (CW145499) 104_538_11138499_148_34980_014 Sorghum methylatio... 40 0.002 2 (CD853860) DH0AMM22ZH04ZZM1 HaDevR6 Helianthus annuus cDNA c... 48 0.002 2 (DC044053) Xenopus laevis NBRP cDNA clone:xlk126f04ex, 5' end. 52 0.002 2 (EE641103) CHEL7835.b1_F15.ab1 CHE(LMS) serpentine sunflower... 48 0.002 2 (EL446925) CHTM25712.b1_P20.ab1 CHT(LMS) Jerusalem artichoke... 48 0.002 2 (CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 58 0.002 1 (CU362481) Aphanomyces euteiches cDNA. 58 0.002 1 (CU352572) Aphanomyces euteiches cDNA. 58 0.002 1 (CU351861) Aphanomyces euteiches cDNA. 58 0.002 1 (EV121799) 0127111 Brassica napus Root library Brassica napu... 58 0.002 1 (CU432931) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 0.002 2 (CU425513) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 0.002 2 (CU432511) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 0.002 2 (CU433594) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 46 0.003 2 (CV430741) 54456.1 After-Cooking Darkening C Solanum tuberos... 44 0.003 3 (CU425551) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 38 0.004 4 (CO117634) GR__Eb01I21.f GR__Eb Gossypium raimondii cDNA clo... 42 0.006 3 (DY889123) CeleSEQ6654 Cunninghamella elegans pBluescript (E... 44 0.006 3 (FE090852) LV_GL_RA41L05f Litopenaeus vannamei gills cDNA li... 50 0.008 2 (FE090851) LV_GL_RA41J05r Litopenaeus vannamei gills cDNA li... 50 0.008 2 (EE263201) B02_B02gf1m4_pDNRf_501949 Myzus persicae, line G0... 40 0.008 2 (EH754958) CNSL14096.b1_O20.ab1 CNS(LMS) yellow starthistle ... 40 0.008 2 (DY334889) OB_SEa01L10.f OB_SEa Ocimum basilicum cDNA clone ... 38 0.008 2 (EH016085) USDA-FP_188621 Lysiphlebus testaceipes adult whol... 54 0.008 2 (ES219750) MpGnorm_ag4_J11 Myzus persicae, tobacco lineage, ... 40 0.008 2 (CF769450) DSBF1_1_E07.g1_A010 Drought-stressed before flowe... 40 0.008 2 (ES220061) MpGnorm_ag5_I18 Myzus persicae, tobacco lineage, ... 40 0.008 2 (CF769369) DSBF1_1_E07.b1_A010 Drought-stressed before flowe... 40 0.008 2 (BZ666839) PUBGL29TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 40 0.008 2 (EE631507) CHEL2796.b1_H03.ab1 CHE(LMS) serpentine sunflower... 46 0.008 2 (FI037947) CHO_OF6458xk19f1.ab1 CHO_OF6 Nicotiana tabacum ge... 56 0.009 1 (EI014354) bb77d03.f Dekkera bruxellensis Random Genomic Lib... 56 0.009 1 (DN977051) SV5_38D05_CZ22re_003 SV5 Solanum chacoense cDNA, ... 56 0.009 1 (DN743291) 94451.1 Full Length Mixed Tuber Solanum tuberosum... 56 0.009 1 (DB689471) Solanum lycopersicum cDNA, clone: LEFL1036AG05, 5... 56 0.009 1 (DB688514) Solanum lycopersicum cDNA, clone: LEFL1033BA11, 5... 56 0.009 1 (CN463597) 6701.1 After-Cooking Darkening A Solanum tuberosu... 56 0.009 1 (CN212811) 26332 Suspension culture Solanum tuberosum cDNA, ... 56 0.009 1 (BP883802) Solanum lycopersicum cDNA, clone: FA26DE03, 5' en... 56 0.009 1 (BG097821) EST462340 potato leaves and petioles Solanum tube... 56 0.009 1 (BF187729) EST444016 potato stolon, Cornell University Solan... 56 0.009 1 (BE923249) EST427018 potato leaves and petioles Solanum tube... 56 0.009 1 (BE343703) EST408865 potato stolon, Cornell University Solan... 56 0.009 1 (BE342617) EST395461 potato stolon, Cornell University Solan... 56 0.009 1 (BE342309) EST395153 potato stolon, Cornell University Solan... 56 0.009 1 (GE414128) 294493141 Nasonia vitripennis Adult Male Nasonia ... 56 0.009 1 (AW907097) EST343129 potato stolon, Cornell University Solan... 56 0.009 1 (EY322375) CAWX8413.fwd CAWX Helobdella robusta Primary Earl... 56 0.009 1 (BQ264264) faa49c10.y1 zebrafish fin day3 regeneration Danio... 38 0.012 3 (CT586808) Danio rerio EST, clone ZF_mu_19l03 5'. 38 0.012 3 (BQ783956) faa92g07.y1 Sugano SJD adult male Danio rerio cDN... 38 0.012 3 (CT603543) Danio rerio EST, clone ZF_mu_51n07 5'. 38 0.013 3 (CT621279) Danio rerio EST, clone ZF_mu_42i04 5'. 38 0.013 3 (AW127855) fi04a10.y1 Sugano Kawakami zebrafish DRA Danio re... 38 0.013 3 (CT732355) Danio rerio EST, clone ZF_mu_222g14 5'. 38 0.013 3 (DT869491) AGENCOURT_58679370 NIH_ZGC_9 Danio rerio cDNA clo... 38 0.014 3 (CT679105) Danio rerio EST, clone ZF_mu_232c06 5'. 38 0.014 3 (CT645530) Danio rerio EST, clone ZF_mu_116n13 5'. 38 0.014 3 (CT613503) Danio rerio EST, clone ZF_mu_69i06 5'. 38 0.014 3 (CV491520) AGENCOURT_32338877 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.014 3 (CT614098) Danio rerio EST, clone ZF_mu_42n23 5'. 38 0.014 3 (CT603426) Danio rerio EST, clone ZF_mu_51n14 5'. 38 0.014 3 (DN834150) AGENCOURT_49837644 NIH_ZGC_16 Danio rerio cDNA cl... 38 0.014 3 (CV480210) AGENCOURT_32339182 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.014 3 (CK711871) ZF201-P00017-DEPE-F_P03 GISZF001_ma Danio rerio c... 38 0.014 3 (CT686203) Danio rerio EST, clone ZF_mu_230e10 5'. 38 0.014 3 (CT627558) Danio rerio EST, clone ZF_mu_66e08 5'. 38 0.014 3 (CT654406) Danio rerio EST, clone ZF_mu_147m14 3'. 38 0.015 3 (CT652670) Danio rerio EST, clone ZF_mu_5c08 5'. 38 0.015 3 (DN833733) AGENCOURT_49837588 NIH_ZGC_16 Danio rerio cDNA cl... 38 0.015 3 (CT674654) Danio rerio EST, clone ZF_mu_188k18 5'. 38 0.015 3 (CT634300) Danio rerio EST, clone ZF_mu_100j04 5'. 38 0.015 3 (CT733607) Danio rerio EST, clone ZF_mu_285o07 5'. 38 0.015 3 (DT060452) AGENCOURT_56120591 NIH_ZGC_7 Danio rerio cDNA clo... 38 0.015 3 (CV112933) AGENCOURT_31573607 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.015 3 (CK710223) ZF201-P00010-DEPE-F_H21 GISZF001_ma Danio rerio c... 38 0.015 3 (CT635390) Danio rerio EST, clone ZF_mu_63m14 3'. 38 0.015 3 (CT600776) Danio rerio EST, clone ZF_mu_90j17 5'. 38 0.015 3 (CT628130) Danio rerio EST, clone ZF_mu_87o20 3'. 38 0.016 3 (CV108359) AGENCOURT_31572542 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.016 3 (CK683973) ZF101-P00033-DEPE-F_C17 GISZF001_ra Danio rerio c... 38 0.016 3 (CT647861) Danio rerio EST, clone ZF_mu_112j23 5'. 38 0.016 3 (CV486021) AGENCOURT_32340266 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.016 3 (CT598642) Danio rerio EST, clone ZF_mu_18j06 5'. 38 0.016 3 (DV594441) AGENCOURT_61887432 NIH_ZGC_14 Danio rerio cDNA cl... 38 0.016 3 (CT596458) Danio rerio EST, clone ZF_mu_81i22 3'. 38 0.016 3 (CV490126) AGENCOURT_32338218 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.016 3 (CT701666) Danio rerio EST, clone ZF_mu_233f04 5'. 38 0.016 3 (CK867125) AGENCOURT_19414271 NIH_ZGC_16 Danio rerio cDNA cl... 38 0.016 3 (CK714144) ZF201-P00029-DEPE-F_C06 GISZF001_ma Danio rerio c... 38 0.017 3 (CV119217) AGENCOURT_31575385 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.017 3 (CD758488) AGENCOURT_14621896 NCI_CGAP_ZKid1 Danio rerio cDN... 38 0.017 3 (CF999559) AGENCOURT_16387959 NIH_ZGC_7 Danio rerio cDNA clo... 38 0.017 3 (CT646014) Danio rerio EST, clone ZF_mu_133g18 5'. 38 0.017 3 (EE299815) AGENCOURT_85455691 NIH_ZGC_23 Danio rerio cDNA cl... 38 0.018 3 (EE304205) AGENCOURT_85522910 NIH_ZGC_23 Danio rerio cDNA cl... 38 0.018 3 (CT707950) Danio rerio EST, clone ZF_mu_194f23 3'. 38 0.018 3 (CT705879) Danio rerio EST, clone ZF_mu_190i08 5'. 38 0.018 3 (CT607423) Danio rerio EST, clone ZF_mu_165j15 5'. 38 0.018 3 (CT726171) Danio rerio EST, clone ZF_mu_224n23 5'. 38 0.018 3 (CT697547) Danio rerio EST, clone ZF_mu_201g06 5'. 38 0.019 3 (CT681548) Danio rerio EST, clone ZF_mu_152i05 5'. 38 0.019 3 (CT673083) Danio rerio EST, clone ZF_mu_130m18 3'. 38 0.019 3 (CD758907) AGENCOURT_14632706 NCI_CGAP_ZKid1 Danio rerio cDN... 38 0.019 3 (CA473003) AGENCOURT_10740465 NCI_CGAP_ZKid1 Danio rerio cDN... 38 0.020 3 (CA474696) AGENCOURT_10700504 NCI_CGAP_ZKid1 Danio rerio cDN... 38 0.020 3 (CT666245) Danio rerio EST, clone ZF_mu_2g24 5'. 38 0.020 3 (CF441189) EST677534 normalized cDNA library of onion Allium... 54 0.020 2 (CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 46 0.021 2 (CN020499) AGENCOURT_20191280 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.021 3 (CN022829) AGENCOURT_20754582 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.022 3 (CN023168) AGENCOURT_20189181 NIH_ZGC_15 Danio rerio cDNA cl... 38 0.022 3 (CK867831) AGENCOURT_19413794 NIH_ZGC_16 Danio rerio cDNA cl... 38 0.022 3 (CT762473) Paramecium tetraurelia 5-PRIME EST from clone LK0... 42 0.022 3 (DV394911) NADBA08TR Aedes aegypti infected with Dengue viru... 44 0.022 2 (AC204226) Zea mays chromosome 6 clone CH201-430M11; ZMMBBc0... 40 0.024 2 (AC204396) Zea mays chromosome 6 clone CH201-491I19; ZMMBBc0... 40 0.024 2
>(BJ410707) Dictyostelium discoideum cDNA clone:ddv1e16, 5' end, single read. Length = 651
Score = 1289 bits (650), Expect = 0.0 Identities = 650/650 (100%) Strand = Plus / Plus
Query: 17 aaaaaacgataactaacatataaataaaggtagcattaaattaggctataactggattat 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aaaaaacgataactaacatataaataaaggtagcattaaattaggctataactggattat 61
Query: 77 atatttataaaatgttagtattatttgaaacatcagcaggttttgccttattcaaggttt 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 atatttataaaatgttagtattatttgaaacatcagcaggttttgccttattcaaggttt 121
Query: 137 tggatgaaggtaaaatgaaatcaaaaccagttgacatcaataactttttcgaaaccccag 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tggatgaaggtaaaatgaaatcaaaaccagttgacatcaataactttttcgaaaccccag 181
Query: 197 aaaaagcttcctcatttgtttcattaaagaaattttataaatttgatggtacattagatg 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aaaaagcttcctcatttgtttcattaaagaaattttataaatttgatggtacattagatg 241
Query: 257 cattagaagcacaaactgcaattgcagaatgtaaagttccagaatcattatcaaactttt 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 cattagaagcacaaactgcaattgcagaatgtaaagttccagaatcattatcaaactttt 301
Query: 317 taaaaaagaatgttgttagtgagaaattaaatgaacaattaattgttagtgatagtaaat 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 taaaaaagaatgttgttagtgagaaattaaatgaacaattaattgttagtgatagtaaat 361
Query: 377 ttggtaatgcaatcaaggacgcattaaatatcaaagttttatgtgatgatactactcaag 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ttggtaatgcaatcaaggacgcattaaatatcaaagttttatgtgatgatactactcaag 421
Query: 437 agttgattagaggtattcgtttacaattgaaatcattggtcaatgcaaatgaacaagatt 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 agttgattagaggtattcgtttacaattgaaatcattggtcaatgcaaatgaacaagatt 481
Query: 497 tgaatgccatgtcaattggtttatcacattcatacagtagatataaattaaagttctcac 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 tgaatgccatgtcaattggtttatcacattcatacagtagatataaattaaagttctcac 541
Query: 557 cagataaggtcgatacaatgatcgttcaagccatctcattattggatgatttgactaccg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 cagataaggtcgatacaatgatcgttcaagccatctcattattggatgatttgactaccg 601
Query: 617 aaatcaacatttacgcaatgagagctcgtgaatggtacggatggcatttc 666 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 aaatcaacatttacgcaatgagagctcgtgaatggtacggatggcatttc 651
Score = 1277 bits (644), Expect = 0.0 Identities = 644/644 (100%) Strand = Plus / Plus
Query: 1462 cgataactaacatataaataaaggtagcattaaattaggctataactggattatatattt 1521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 cgataactaacatataaataaaggtagcattaaattaggctataactggattatatattt 67
Query: 1522 ataaaatgttagtattatttgaaacatcagcaggttttgccttattcaaggttttggatg 1581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 ataaaatgttagtattatttgaaacatcagcaggttttgccttattcaaggttttggatg 127
Query: 1582 aaggtaaaatgaaatcaaaaccagttgacatcaataactttttcgaaaccccagaaaaag 1641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 aaggtaaaatgaaatcaaaaccagttgacatcaataactttttcgaaaccccagaaaaag 187
Query: 1642 cttcctcatttgtttcattaaagaaattttataaatttgatggtacattagatgcattag 1701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 cttcctcatttgtttcattaaagaaattttataaatttgatggtacattagatgcattag 247
Query: 1702 aagcacaaactgcaattgcagaatgtaaagttccagaatcattatcaaactttttaaaaa 1761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 aagcacaaactgcaattgcagaatgtaaagttccagaatcattatcaaactttttaaaaa 307
Query: 1762 agaatgttgttagtgagaaattaaatgaacaattaattgttagtgatagtaaatttggta 1821 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 agaatgttgttagtgagaaattaaatgaacaattaattgttagtgatagtaaatttggta 367
Query: 1822 atgcaatcaaggacgcattaaatatcaaagttttatgtgatgatactactcaagagttga 1881 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 atgcaatcaaggacgcattaaatatcaaagttttatgtgatgatactactcaagagttga 427
Query: 1882 ttagaggtattcgtttacaattgaaatcattggtcaatgcaaatgaacaagatttgaatg 1941 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ttagaggtattcgtttacaattgaaatcattggtcaatgcaaatgaacaagatttgaatg 487
Query: 1942 ccatgtcaattggtttatcacattcatacagtagatataaattaaagttctcaccagata 2001 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 ccatgtcaattggtttatcacattcatacagtagatataaattaaagttctcaccagata 547
Query: 2002 aggtcgatacaatgatcgttcaagccatctcattattggatgatttgactaccgaaatca 2061 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 aggtcgatacaatgatcgttcaagccatctcattattggatgatttgactaccgaaatca 607
Query: 2062 acatttacgcaatgagagctcgtgaatggtacggatggcatttc 2105 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 608 acatttacgcaatgagagctcgtgaatggtacggatggcatttc 651
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 98226423 Number of Hits to DB: 3,187,941,889 Number of extensions: 189329122 Number of successful extensions: 15022056 Number of sequences better than 10.0: 1156 Length of query: 3518 Length of database: 98,766,808,389 Length adjustment: 25 Effective length of query: 3493 Effective length of database: 96,311,147,814 Effective search space: 336414839314302 Effective search space used: 336414839314302 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 7.16 |
Homology vs Protein |
Query= Contig-U15516-1 (Contig-U15516-1Q) /CSM_Contig/Contig-U15516-1Q.Seq.d (3518 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q55FI4) RecName: Full=Nucleolar protein 58; AltName: Full=Nucle... 832 0.0 AB059832_1(AB059832|pid:none) Nicotiana tabacum MARBPF mRNA for ... 437 e-120 AM433343_4(AM433343|pid:none) Vitis vinifera contig VV78X083692.... 430 e-118 BC044082_1(BC044082|pid:none) Xenopus laevis similar to nucleola... 430 e-118 BC106291_1(BC106291|pid:none) Xenopus laevis similar to nucleola... 430 e-118 CR762270_1(CR762270|pid:none) Xenopus tropicalis finished cDNA, ... 428 e-118 BC077204_1(BC077204|pid:none) Xenopus laevis MGC78950 protein, m... 428 e-118 BC064169_1(BC064169|pid:none) Xenopus tropicalis nucleolar prote... 428 e-118 BC155194_1(BC155194|pid:none) Danio rerio NOP58 ribonucleoprotei... 428 e-118 BC061961_1(BC061961|pid:none) Danio rerio NOP58 ribonucleoprotei... 428 e-118 BC044394_1(BC044394|pid:none) Danio rerio NOP58 ribonucleoprotei... 428 e-118 BC122512_1(BC122512|pid:none) Xenopus laevis MGC78950 protein, m... 428 e-118 BC151884_1(BC151884|pid:none) Danio rerio NOP58 ribonucleoprotei... 427 e-117 AP008209_1470(AP008209|pid:none) Oryza sativa (japonica cultivar... 423 e-116 AB015431_1(AB015431|pid:none) Oryza sativa mRNA for SAR DNA bind... 420 e-115 (Q9P7S7) RecName: Full=Nucleolar protein 58; &AL138854_6(AL1388... 420 e-115 AE014134_1244(AE014134|pid:none) Drosophila melanogaster chromos... 418 e-115 AJ249465_1(AJ249465|pid:none) Drosophila melanogaster mRNA for D... 418 e-115 AF007271_14(AF007271|pid:none) Arabidopsis thaliana BAC TM021B04... 415 e-114 EU515128_1(EU515128|pid:none) Dunaliella salina MAR-binding prot... 415 e-114 AC121244_25(AC121244|pid:none) Medicago truncatula clone mth2-31... 415 e-114 (Q9MAB3) RecName: Full=Probable nucleolar protein 5-2; AltName: ... 414 e-114 BT053087_1(BT053087|pid:none) Medicago truncatula clone MTYFL_FM... 413 e-113 CP001574_670(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 407 e-111 BC151725_1(BC151725|pid:none) Bos taurus NOP58 ribonucleoprotein... 407 e-111 BC009306_1(BC009306|pid:none) Homo sapiens NOP58 ribonucleoprote... 405 e-111 CR859793_1(CR859793|pid:none) Pongo abelii mRNA; cDNA DKFZp468L1... 405 e-111 AL117554_1(AL117554|pid:none) Homo sapiens mRNA; cDNA DKFZp564H2... 405 e-111 T17299(T17299)hypothetical protein DKFZp564H2171.1 - human (frag... 405 e-111 AK133959_1(AK133959|pid:none) Mus musculus 8 days embryo whole b... 403 e-110 AK044216_1(AK044216|pid:none) Mus musculus adult retina cDNA, RI... 402 e-110 AF069782_1(AF069782|pid:none) Rattus sp. unknown mRNA. 400 e-109 (Q9QZ86) RecName: Full=Nucleolar protein 58; AltName: Full=Nucle... 400 e-109 AF043704_1(AF043704|pid:none) Caenorhabditis elegans cosmid W01B... 394 e-107 FN392322_280(FN392322|pid:none) Pichia pastoris GS115 chromosome... 388 e-106 (Q6BIX6) RecName: Full=Nucleolar protein 58; &CR382139_303(CR38... 381 e-103 (A3LUT0) RecName: Full=Nucleolar protein 58; &CP000499_38(CP000... 380 e-103 (A7TIF5) RecName: Full=Nucleolar protein 58; 380 e-103 CU928180_634(CU928180|pid:none) Kluyveromyces thermotolerans str... 380 e-103 (A2QE38) RecName: Full=Nucleolar protein 58; &AM270022_76(AM270... 377 e-102 (Q6CKR8) RecName: Full=Nucleolar protein 58; &CR382126_375(CR38... 377 e-102 FM992693_31(FM992693|pid:none) Candida dubliniensis CD36 chromos... 377 e-102 (Q4WYK9) RecName: Full=Nucleolar protein 58; 376 e-102 (Q59S06) RecName: Full=Nucleolar protein 58; 376 e-102 (A5E4V9) RecName: Full=Nucleolar protein 58; 376 e-102 (Q12499) RecName: Full=Nucleolar protein 58; AltName: Full=Nucle... 376 e-102 (A6ZPE5) RecName: Full=Nucleolar protein 58; AltName: Full=Nucle... 376 e-102 (A1D688) RecName: Full=Nucleolar protein 58; 374 e-101 (Q753I4) RecName: Full=Nucleolar protein 58; &AE016819_561(AE01... 373 e-101 AM920428_1468(AM920428|pid:none) Penicillium chrysogenum Wiscons... 372 e-101 AM910990_80(AM910990|pid:none) Plasmodium knowlesi strain H chro... 369 e-100 (A6RMY5) RecName: Full=Nucleolar protein 58; 368 e-99 (Q1E1Q5) RecName: Full=Nucleolar protein 58; 365 5e-99 FN357418_41(FN357418|pid:none) Schistosoma mansoni genome sequen... 360 3e-97 FN314949_1(FN314949|pid:none) Schistosoma japonicum isolate Anhu... 356 4e-96 CU638744_128(CU638744|pid:none) Podospora anserina genomic DNA c... 355 8e-96 AY365418_6(AY365418|pid:none) Epichloe festucae strain 1035.30 c... 354 1e-95 (Q8X066) RecName: Full=Nucleolar protein 58; &AL669992_6(AL6699... 348 1e-93 CT005254_144(CT005254|pid:none) Leishmania major strain Friedlin... 347 2e-93 AK023975_1(AK023975|pid:none) Homo sapiens cDNA FLJ13913 fis, cl... 346 3e-93 AF053232_1(AF053232|pid:none) Mus musculus SIK similar protein m... 343 2e-92 AY950659_1(AY950659|pid:none) Euglena gracilis Nop58p mRNA, part... 338 6e-91 AC149637_27(AC149637|pid:none) Medicago truncatula clone mth2-18... 333 3e-89 FN314948_1(FN314948|pid:none) Schistosoma japonicum isolate Anhu... 313 3e-83 AJ311840_1(AJ311840|pid:none) Xenopus laevis mRNA for XNop56 pro... 312 5e-83 BC097676_1(BC097676|pid:none) Xenopus laevis XNop56 protein, mRN... 312 5e-83 CR761147_1(CR761147|pid:none) Xenopus tropicalis finished cDNA, ... 311 8e-83 BC056732_1(BC056732|pid:none) Danio rerio NOP56 ribonucleoprotei... 310 2e-82 AY648814_1(AY648814|pid:none) Danio rerio NOP56 mRNA, complete c... 310 2e-82 BT059278_1(BT059278|pid:none) Salmo salar clone ssal-rgf-538-106... 306 3e-81 BT046076_1(BT046076|pid:none) Salmo salar clone ssal-rgf-541-014... 306 3e-81 (O04656) RecName: Full=Putative nucleolar protein 5-3; AltName: ... 306 5e-81 AJ719454_1(AJ719454|pid:none) Gallus gallus mRNA for hypothetica... 303 4e-80 CP000588_43(CP000588|pid:none) Ostreococcus lucimarinus CCE9901 ... 302 5e-80 CR382139_279(CR382139|pid:none) Debaryomyces hansenii strain CBS... 297 2e-78 FM992695_866(FM992695|pid:none) Candida dubliniensis CD36 chromo... 296 5e-78 CR382130_684(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 293 4e-77 CP001327_538(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 290 2e-76 AK292721_1(AK292721|pid:none) Homo sapiens cDNA FLJ76962 complet... 287 2e-75 (Q5RA29) RecName: Full=Nucleolar protein 56; AltName: Full=Nucle... 286 4e-75 AE014297_3277(AE014297|pid:none) Drosophila melanogaster chromos... 285 6e-75 BT001613_1(BT001613|pid:none) Drosophila melanogaster RE33426 fu... 285 6e-75 BT085852_1(BT085852|pid:none) Zea mays full-length cDNA clone ZM... 285 1e-74 (Q3SZ63) RecName: Full=Nucleolar protein 56; AltName: Full=Nucle... 284 1e-74 (O94514) RecName: Full=Nucleolar protein 56; AltName: Full=Ribos... 284 1e-74 (Q9D6Z1) RecName: Full=Nucleolar protein 56; AltName: Full=Nucle... 284 1e-74 AK139924_1(AK139924|pid:none) Mus musculus 2 cells egg cDNA, RIK... 284 1e-74 AK077795_1(AK077795|pid:none) Mus musculus adult male thymus cDN... 283 4e-74 CR380947_165(CR380947|pid:none) Candida glabrata strain CBS138 c... 282 7e-74 AM270362_35(AM270362|pid:none) Aspergillus niger contig An16c010... 281 9e-74 (Q12460) RecName: Full=Nucleolar protein 56; AltName: Full=Ribos... 281 9e-74 CU928180_42(CU928180|pid:none) Kluyveromyces thermotolerans stra... 281 9e-74 CP001142_240(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 281 2e-73 AY950661_1(AY950661|pid:none) Physarum polycephalum Nop56p mRNA,... 281 2e-73 X60437_1(X60437|pid:none) Drosophila subobscura Dnop56 gene and ... 280 2e-73 AC009894_10(AC009894|pid:none) Arabidopsis thaliana chromosome I... 279 5e-73 AM920427_1595(AM920427|pid:none) Penicillium chrysogenum Wiscons... 279 5e-73 BT052903_1(BT052903|pid:none) Medicago truncatula clone MTYFL_FM... 279 6e-73 AC135505_12(AC135505|pid:none) Medicago truncatula clone mth2-24... 279 6e-73 AP008209_1480(AP008209|pid:none) Oryza sativa (japonica cultivar... 278 8e-73 AM502228_52(AM502228|pid:none) Leishmania infantum chromosome 10. 278 1e-72 AP007151_1100(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 276 3e-72 CR940347_480(CR940347|pid:none) Theileria annulata strain Ankara... 276 5e-72 AB024033_24(AB024033|pid:none) Arabidopsis thaliana genomic DNA,... 276 5e-72 AK226630_1(AK226630|pid:none) Arabidopsis thaliana mRNA for puta... 276 5e-72 AE016816_62(AE016816|pid:none) Ashbya gossypii (= Eremothecium g... 275 7e-72 AY754572_1(AY754572|pid:none) Drosophila miranda strain MSH22 No... 274 1e-71 CR382124_510(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 273 3e-71 AE017345_334(AE017345|pid:none) Cryptococcus neoformans var. neo... 266 5e-69 BC086568_1(BC086568|pid:none) Rattus norvegicus nucleolar protei... 263 3e-68 AC092212_41(AC092212|pid:none) Trypanosoma brucei chromosome 8 c... 253 3e-65 AL590444_81(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 246 4e-63 FN319935_1(FN319935|pid:none) Schistosoma japonicum isolate Anhu... 240 2e-61 FN357415_18(FN357415|pid:none) Schistosoma mansoni genome sequen... 230 3e-58 AM910991_158(AM910991|pid:none) Plasmodium knowlesi strain H chr... 228 2e-57 AJ010592_34(AJ010592|pid:none) Guillardia theta DNA for complete... 226 3e-57 AL590451_161(AL590451|pid:none) chromosome IX of strain GB-M1 of... 218 1e-54 AF083031_125(AF083031|pid:none) Guillardia theta nucleomorph chr... 209 8e-52 CP000881_127(CP000881|pid:none) Hemiselmis andersenii chromosome... 208 1e-51 AF201092_1(AF201092|pid:none) Sulfolobus acidocaldarius NOP56 ho... 186 4e-45 CP000561_1091(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 179 5e-43 AP005452_6(AP005452|pid:none) Oryza sativa Japonica Group genomi... 176 7e-42 AE006641_852(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 175 9e-42 BC090915_1(BC090915|pid:none) Danio rerio NOP56 ribonucleoprotei... 175 9e-42 CP000852_1257(CP000852|pid:none) Caldivirga maquilingensis IC-16... 174 2e-41 CP000855_1305(CP000855|pid:none) Thermococcus onnurineus NA1, co... 174 2e-41 CP000660_1323(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 173 5e-41 CP001399_1228(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 172 6e-41 CP001014_1686(CP001014|pid:none) Thermoproteus neutrophilus V24S... 172 1e-40 CP001400_1150(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 171 1e-40 CR954208_46(CR954208|pid:none) Ostreococcus tauri strain OTTH059... 170 4e-40 CP000505_375(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 169 7e-40 CP000575_1234(CP000575|pid:none) Staphylothermus marinus F1, com... 168 1e-39 AE009439_559(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 167 2e-39 B72528(B72528)probable nucleolar protein NOP5 APE2199 - Aeropyru... 167 3e-39 CP000866_1387(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 164 2e-38 CP000816_70(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, com... 164 2e-38 AY051644_1(AY051644|pid:none) Drosophila melanogaster GM14238 fu... 163 5e-38 CP000745_1603(CP000745|pid:none) Methanococcus maripaludis C7, c... 159 9e-37 CP000609_999(CP000609|pid:none) Methanococcus maripaludis C5, co... 157 2e-36 GM016257_360(GM016257|pid:none) Sequence 1087 from Patent EP1923... 157 3e-36 AP006878_185(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 157 3e-36 CP001398_465(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 156 4e-36 BX950229_596(BX950229|pid:none) Methanococcus maripaludis strain... 154 2e-35 CP000742_1447(CP000742|pid:none) Methanococcus vannielii SB, com... 153 5e-35 AE000666_1194(AE000666|pid:none) Methanothermobacter thermautotr... 146 5e-33 AE017199_335(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 139 7e-31 CP000678_1046(CP000678|pid:none) Methanobrevibacter smithii ATCC... 139 1e-30 AE008384_1593(AE008384|pid:none) Methanosarcina mazei strain Goe... 133 4e-29 CP000300_1443(CP000300|pid:none) Methanococcoides burtonii DSM 6... 126 5e-27 AK033190_1(AK033190|pid:none) Mus musculus 15 days embryo male t... 124 2e-26 (Q8WWY3) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 124 2e-26 AK005294_1(AK005294|pid:none) Mus musculus adult male cerebellum... 124 2e-26 AY040822_1(AY040822|pid:none) Homo sapiens U4/U6 snRNP-associate... 124 2e-26 AK033283_1(AK033283|pid:none) Mus musculus 15 days embryo male t... 124 2e-26 AB463201_1(AB463201|pid:none) Synthetic construct DNA, clone: pF... 124 2e-26 AK301709_1(AK301709|pid:none) Homo sapiens cDNA FLJ59251 complet... 123 5e-26 AF308303_1(AF308303|pid:none) Homo sapiens serologically defined... 122 7e-26 AE014296_2640(AE014296|pid:none) Drosophila melanogaster chromos... 121 2e-25 (Q6NVP6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 120 4e-25 CP000102_1373(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 120 5e-25 BC061461_1(BC061461|pid:none) Mus musculus PRP31 pre-mRNA proces... 118 1e-24 (Q5U5C5) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 118 2e-24 (Q7SXM7) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 116 5e-24 AK300844_1(AK300844|pid:none) Homo sapiens cDNA FLJ56668 complet... 111 2e-22 AM114193_2828(AM114193|pid:none) Uncultured methanogenic archaeo... 110 4e-22 BT036493_1(BT036493|pid:none) Zea mays full-length cDNA clone ZM... 107 3e-21 AK066109_1(AK066109|pid:none) Oryza sativa Japonica Group cDNA c... 107 3e-21 AC006708_15(AC006708|pid:none) Caenorhabditis elegans cosmid Y11... 106 7e-21 BT054842_1(BT054842|pid:none) Zea mays full-length cDNA clone ZM... 105 9e-21 AY553910_1(AY553910|pid:none) Brassica juncea putative preRNA pr... 105 9e-21 FN357551_9(FN357551|pid:none) Schistosoma mansoni genome sequenc... 105 1e-20 AC150800_1(AC150800|pid:none) Medicago truncatula chromosome 7 c... 104 2e-20 AY737058_1(AY737058|pid:none) Oreochromis mossambicus clone Ov06... 104 2e-20 CR954202_367(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 103 3e-20 CP000584_134(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 102 1e-19 CP000780_510(CP000780|pid:none) Candidatus Methanoregula boonei ... 99 8e-19 AL035475_27(AL035475|pid:none) Plasmodium falciparum MAL4P2. 99 8e-19 AP004010_10(AP004010|pid:none) Oryza sativa Japonica Group genom... 99 1e-18 CP001575_252(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 95 2e-17 AB277191_1(AB277191|pid:none) Ipomoea nil PnD21-22 mRNA for simi... 94 4e-17 AM920431_493(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 92 1e-16 AE017261_668(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 92 2e-16 AM180088_1636(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 89 9e-16 CR936257_1027(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 88 3e-15 AE004437_907(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 86 7e-15 BA000011_357(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 86 1e-14 AY596297_759(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 86 1e-14 CP001365_1032(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 85 2e-14 CU928175_514(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 83 6e-14 CR382128_529(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 82 1e-13 AE000782_2062(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 82 1e-13 AY811915_1(AY811915|pid:none) Schistosoma japonicum SJCHGC08870 ... 81 2e-13 CP000254_2189(CP000254|pid:none) Methanospirillum hungatei JF-1,... 81 3e-13 AP007169_339(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 79 9e-13 FN318102_1(FN318102|pid:none) Schistosoma japonicum isolate Anhu... 79 1e-12 AY007719_1(AY007719|pid:none) Bos taurus hypothetical protein 11... 78 2e-12 FN357430_17(FN357430|pid:none) Schistosoma mansoni genome sequen... 77 4e-12 AK044457_1(AK044457|pid:none) Mus musculus adult retina cDNA, RI... 75 1e-11 AX972834_1(AX972834|pid:none) Sequence 3637 from Patent EP1104808. 75 2e-11 AL833804_6(AL833804|pid:none) Mouse DNA sequence from clone RP23... 74 5e-11 CU928170_505(CU928170|pid:none) Kluyveromyces thermotolerans str... 65 1e-08 (P49704) RecName: Full=Pre-mRNA-processing factor 31; &S64386(S... 65 2e-08 CP000499_437(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 61 3e-07 CR382135_334(CR382135|pid:none) Debaryomyces hansenii strain CBS... 60 7e-07 AP008217_1066(AP008217|pid:none) Oryza sativa (japonica cultivar... 59 1e-06 A72528(A72528)hypothetical protein APE2198 - Aeropyrum pernix (s... 59 1e-06 FM992689_597(FM992689|pid:none) Candida dubliniensis CD36 chromo... 58 2e-06 CR382124_618(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 55 1e-05 AK072851_1(AK072851|pid:none) Oryza sativa Japonica Group cDNA c... 51 3e-04 AK071145_1(AK071145|pid:none) Oryza sativa Japonica Group cDNA c... 51 3e-04 DQ158857_102(DQ158857|pid:none) Bigelowiella natans nucleomorph ... 48 0.003 AM502234_172(AM502234|pid:none) Leishmania infantum chromosome 16. 45 0.025 AB236818_1(AB236818|pid:none) Trifolium pratense RNA for putativ... 44 0.032 CT005255_171(CT005255|pid:none) Leishmania major strain Friedlin... 42 0.12 AC003671_6(AC003671|pid:none) Arabidopsis thaliana chromosome 1 ... 42 0.21 AY735555_1(AY735555|pid:none) Arabidopsis thaliana chromosome 1 ... 42 0.21 AK102645_1(AK102645|pid:none) Oryza sativa Japonica Group cDNA c... 41 0.35 AM285315_5(AM285315|pid:none) Spiroplasma citri GII3-3X chromoso... 40 0.79 AY735554_1(AY735554|pid:none) Arabidopsis thaliana chromosome 1 ... 39 1.3 AX972415_1(AX972415|pid:none) Sequence 3218 from Patent EP1104808. 38 2.3 (Q89AS3) RecName: Full=DNA gyrase subunit A; EC=5.99.1.... 38 3.0 EU016633_18(EU016633|pid:none) Uncultured Group I marine crenarc... 37 5.1 (Q12019) RecName: Full=Midasin; AltName: Full=MIDAS-containing p... 37 6.7
>(Q55FI4) RecName: Full=Nucleolar protein 58; AltName: Full=Nucleolar protein 5; Length = 638
Score = 832 bits (2148), Expect = 0.0 Identities = 432/456 (94%), Positives = 432/456 (94%) Frame = +3
Query: 1527 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKFDGTLDALEA 1706 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKFDGTLDALEA Sbjct: 1 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKFDGTLDALEA 60
Query: 1707 QTAIAECKVPESLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIR 1886 QTAIAECKVPESLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIR Sbjct: 61 QTAIAECKVPESLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIR 120
Query: 1887 GIRLQLKSLVNANEQDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINI 2066 GIRLQLKSLVNANEQDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINI Sbjct: 121 GIRLQLKSLVNANEQDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINI 180
Query: 2067 YAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILPXXXXXXXXXXX 2246 YAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILP Sbjct: 181 YAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILPEEVAEEVKEAA 240
Query: 2247 QISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGARL 2426 QISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGARL Sbjct: 241 QISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGARL 300
Query: 2427 ICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTPKYGLIYNAKIVGEASLKNKGKM 2606 ICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTPKYGLIYNAKIVGEASLKNKGKM Sbjct: 301 ICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTPKYGLIYNAKIVGEASLKNKGKM 360
Query: 2607 SRVLAAKAALSARFDALCEVSDTSYGIAYKGAVDRRAAAIEGREVRKSLNAVKPEKSGNV 2786 SRVLAAKAALSARFDALCEVSDTSYGIAYKGAVDRRAAAIEGREVRKSLNAVKPEKSGNV Sbjct: 361 SRVLAAKAALSARFDALCEVSDTSYGIAYKGAVDRRAAAIEGREVRKSLNAVKPEKSGNV 420
Query: 2787 AKYDHTKSATTNTTRDVATXXXXXXXXXXXXXDVKM 2894 AKYDHTKSATTNTTRDVAT DVKM Sbjct: 421 AKYDHTKSATTNTTRDVATKSSKESSIKQEKQDVKM 456
Score = 637 bits (1642), Expect = e-180 Identities = 327/338 (96%), Positives = 327/338 (96%) Frame = +1
Query: 88 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKFDGTLDALEA 267 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKFDGTLDALEA Sbjct: 1 MLVLFETSAGFALFKVLDEGKMKSKPVDINNFFETPEKASSFVSLKKFYKFDGTLDALEA 60
Query: 268 QTAIAECKVPESLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIR 447 QTAIAECKVPESLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIR Sbjct: 61 QTAIAECKVPESLSNFLKKNVVSEKLNEQLIVSDSKFGNAIKDALNIKVLCDDTTQELIR 120
Query: 448 GIRLQLKSLVNANEQDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINI 627 GIRLQLKSLVNANEQDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINI Sbjct: 121 GIRLQLKSLVNANEQDLNAMSIGLSHSYSRYKLKFSPDKVDTMIVQAISLLDDLTTEINI 180
Query: 628 YAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILPXXXXXXXXXXX 807 YAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILP Sbjct: 181 YAMRAREWYGWHFPELGKLITNHTQYANAIKAMGNRKSAVDTDFTDILPEEVAEEVKEAA 240
Query: 808 QISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGARL 987 QISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGARL Sbjct: 241 QISMGTEISPEDLDHIFALCDQFLSIQAYHTELTEYLKSRMEAIAPNLTILVGEIVGARL 300
Query: 988 ICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTP 1101 ICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTP Sbjct: 301 ICRAGSLMNLAKYPASTIQILGAEKALFRALKTKHNTP 338
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 4,208,208,659 Number of extensions: 79309385 Number of successful extensions: 210179 Number of sequences better than 10.0: 224 Number of HSP's gapped: 209426 Number of HSP's successfully gapped: 448 Length of query: 1172 Length of database: 1,051,180,864 Length adjustment: 140 Effective length of query: 1032 Effective length of database: 598,062,604 Effective search space: 617200607328 Effective search space used: 617200607328 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
1 |
VF (FL, S) |
6 |
AH (FL, L) |
0 |
AF (FL, S) |
4 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
3 |
CH (FL, L) |
2 |
CF (FL, S) |
1 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
2 |
FC-IC (SUB) |
0 |