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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U15499-1
Contig ID Contig-U15499-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U15499-1 (Contig-U15499-1Q) /CSM_Contig/Contig-U15499-1Q.Seq.d
GGATTATTGTGTTTTTAACACATTAACAACATCCTTCTTTGACTTAAGCT
TCATCACTTAAGTGTAACGTCAGATGAAACACCAGAATCATATTTCACAG
TAAGGGTGCGATTTCACTATGGCAAAGGATAAAACGATAGGATCGATCGC
GAGCAATTGCAGATCTCCCGTGCAGAATTTCTCAAATTTGGTGTTAACGC
TGGAGAAATCCTAGAATGATATCACCGATACAAACCATTCTCATACATAT
TAAATATATTTTTAAAATCAACAATGTCTGAAGAAATTGAATTTAAATTG
GAGTTATTAAAACTTGAAAAAGAACATCAAGAAAAGTTAGAGAAAGAAGG
GTATAAACAAATTACTATTGGAAAAGGTTACACTGTTTTAAGTAAAGAAG
AAAAGCCTTTACAATCGGTTTCTTCCTTCAATAATCCAAAAAACGTATTT
AATTTGGACCAAGCTCAAACTGCTAATACCAATTTTGCCATTGATCGTCA
TATTAAAATGAAAGTTCCACCAGATCCATTGGTTTTTATTAAAATGCCTC
GATCAAAATTAGTTTGGGCATGGGTGAAGATCTCTACAGGTAGTTCAACT
ACTAGTTTAATAGGCAGTTTTACTCCTTGTGCTGCATATATGAGATACAT
TAAATCATATCCAGTTGTTGGTACCGTTGAACAAACTATGGAAAAGAAAA
AAGGCTTTACTTCAAGATTTAATGCCAGTACTGAAATTAAGGCAAGTGCA
TCAGCAGGGTTCTTTGGTTGTGAAGCATCACTCGAAGTGACCACTGGTTT
CGAATATGAAGAAACTGTTACATCAGAGACAACTCACACATGGAAACAAA
CTCTCACTGAGGGAACTTATATTGTTTATCAAAATGTTCTTGTTTATGCA
TATACAATAGTATTATCACTAAATCAAACTAATACTATAAATCAATATAA
CCCAGGTATGAATTTGAGATATATCCAACAAATAGATCGTGCTGTTATGT
TTGTACCAATCAATCGTGATGATCCATTCACTCTTCGTTATCAAGATGCC
ACATGGGATCCAGTGGAGTATGATTCATTAATTAACTATTTGGTTGCAAA
TCCAAGTAAATGGAGATCTGATTCATAAAGAAATAACCAAAAAAAGGTTT
TAAATAATAAAATCATGATTTTTATTATTTCACTATTATGTCAATATTTT
TTTTAATTTTTTATCTTTCATTTTTAAAATAGAAAATACAAGATAATTAT
TAT
Gap no gap
Contig length 1253
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 6255038
End point 6253959
Strand (PLUS/MINUS) MINUS
Number of clones 66
Number of EST 73
Link to clone list U15499
List of clone(s) 

est1=VFG842F,1,671
est2=VFD740E,3,1166
est3=VFI488E,26,1079
est4=VFH356E,93,1157
est5=VFG842Z,143,617
est6=VFI774E,228,1175
est7=VFL719E,232,1185
est8=VHA354F,246,803
est9=VFL580E,249,1231
est10=VHD159E,249,1175
est11=VHG246E,249,1176
est12=VFF853E,251,1253
est13=VSI246E,251,915
est14=VFH148E,252,1175
est15=VHI811E,252,1176
est16=VSI632E,252,935
est17=VSC280E,258,921
est18=VSF133E,259,924
est19=VSF124Z,266,920
est20=VSF124F,278,698
est21=SSA683E,281,1190
est22=SSI876F,284,810
est23=VHB316F,317,421
est24=VSA307Z,374,945
est25=VSI622E,380,1058
est26=VSB538Z,396,938
est27=VSI494E,399,1051
est28=VSD664Z,404,1060
est29=VSD664F,405,890
est30=VSH843Z,411,1050
est31=VSI324Z,412,1051
est32=VSF533E,413,1050
est33=VSH843F,416,940
est34=VSI324F,416,934
est35=VSJ805E,420,1081
est36=VSI258Z,422,1065
est37=VHB316Z,429,1175
est38=VSD887Z,429,1059
est39=VSI258F,429,971
est40=VHH634Z,430,1081
est41=VHP850Z,432,1187
est42=VSD122E,439,1060
est43=VSE826Z,461,1083
est44=VSB232Z,462,1086
est45=VSB736Z,463,1100
est46=VSA742Z,478,1082
est47=VSC693Z,496,1084
est48=VSA873Z,557,1101
est49=VSB592Z,615,1196
est50=VSC423Z,626,1105
est51=VSF771F,682,936
est52=VSF771Z,682,908
est53=VHI256F,687,1195
est54=VHI256Z,687,1176
est55=VHI264F,687,1195
est56=VHI264Z,687,1176
est57=FC-IC0853E,730,1005
est58=FC-IC0902E,730,1005
est59=FC-IC0906F,730,1005
est60=FC-IC0906Z,730,830
est61=FC-IC1078F,730,1005
est62=FC-IC1078Z,730,1005
est63=FC-IC1296F,730,1005
est64=FC-IC1296Z,730,1005
est65=FC-IC1385E,730,1005
est66=FC-IC1435E,730,1005
est67=FC-IC0220E,731,1005
est68=VSF863F,739,916
est69=VHN582F,877,1194
est70=VHN582Z,877,1165
est71=VSJ429F,933,1076
est72=VHD461F,936,1194
est73=VHD461Z,936,1175
Translated Amino Acid sequence 
gllcf*hinnill*lklhhlsvtsdetpesyftvrvrfhygkg*ndridreqlqisraef
lkfgvnageile*YHRYKPFSYILNIFLKSTMSEEIEFKLELLKLEKEHQEKLEKEGYKQ
ITIGKGYTVLSKEEKPLQSVSSFNNPKNVFNLDQAQTANTNFAIDRHIKMKVPPDPLVFI
KMPRSKLVWAWVKISTGSSTTSLIGSFTPCAAYMRYIKSYPVVGTVEQTMEKKKGFTSRF
NASTEIKASASAGFFGCEASLEVTTGFEYEETVTSETTHTWKQTLTEGTYIVYQNVLVYA
YTIVLSLNQTNTINQYNPGMNLRYIQQIDRAVMFVPINRDDPFTLRYQDATWDPVEYDSL
INYLVANPSKWRSDS*rnnqkkvlnnkimifiisllcqyff*ffifhf*nrkykiii
Translated Amino Acid sequence (All Frames) 
Frame A:
gllcf*hinnill*lklhhlsvtsdetpesyftvrvrfhygkg*ndridreqlqisraef
lkfgvnageile*YHRYKPFSYILNIFLKSTMSEEIEFKLELLKLEKEHQEKLEKEGYKQ
ITIGKGYTVLSKEEKPLQSVSSFNNPKNVFNLDQAQTANTNFAIDRHIKMKVPPDPLVFI
KMPRSKLVWAWVKISTGSSTTSLIGSFTPCAAYMRYIKSYPVVGTVEQTMEKKKGFTSRF
NASTEIKASASAGFFGCEASLEVTTGFEYEETVTSETTHTWKQTLTEGTYIVYQNVLVYA
YTIVLSLNQTNTINQYNPGMNLRYIQQIDRAVMFVPINRDDPFTLRYQDATWDPVEYDSL
INYLVANPSKWRSDS*rnnqkkvlnnkimifiisllcqyff*ffifhf*nrkykiii


Frame B:
dycvfntlttsffdlsfit*v*rqmkhqnhisq*gcdftmakdktigsiasncrspvqnf
snlvltleks*nditdtnhshty*iyf*nqqclkklnlnwsy*nlkknikks*rkkgink
lllekvtlf*vkkkslynrflpsiiqktyliwtklkllipilplivilk*kfhqihwfll
kcldqn*fghg*rslqvvqllv**avlllvlhi*dtlnhiqllvplnklwkrkkallqdl
mpvlklrqvhqqgslvvkhhsk*plvsnmkkllhqrqlthgnklslrelilfikmflfmh
iq*yyh*iklil*initqv*i*disnk*ivllclyqsivmihslfvikmphgiqwsmih*
ltiwlqiqvngdlihkeitkkrf*iiks*fllfhyyvniffnflsfifkientr*ll


Frame C:
iivflth*qhpslt*asslkcnvr*ntriifhskgaislwqrikr*drsraiadlpcris
qiwc*rwrnprmispiqtilihikyifkinnv*rn*i*igvikt*krtsrkvrerrv*tn
yywkrlhcfk*rrkaftigfflq*skkri*fgpssnc*yqfch*ssy*nesstrsigfy*
nasikislgmgedlyr*fny*fnrqfyslcciyeih*iisscwyr*tnygkekrlyfki*
cqy*n*gkcisrvlwl*sitrsdhwfri*rncyirdnshmetnsh*gnlyclskcsclci
ynsiitksn*yyksi*pryefeiyptnrsccyvctnqs**sihsslsrchmgssgv*fin
*lfgcksk*mei*fikk*pkkgfk**nhdfyyftimsifflifylsflk*kiqdnyy
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U15499-1 (Contig-U15499-1Q)
/CSM_Contig/Contig-U15499-1Q.Seq.d
         (1253 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15499-1 (Contig-U15499-1Q) /CSM_Contig/Conti...  2327  0.0
Contig-U15897-1 (Contig-U15897-1Q) /CSM_Contig/Conti...   488  e-137
Contig-U15761-1 (Contig-U15761-1Q) /CSM_Contig/Conti...   488  e-137
Contig-U15581-1 (Contig-U15581-1Q) /CSM_Contig/Conti...   488  e-137
Contig-U15118-1 (Contig-U15118-1Q) /CSM_Contig/Conti...   488  e-137
Contig-U13965-1 (Contig-U13965-1Q) /CSM_Contig/Conti...   488  e-137
Contig-U15735-1 (Contig-U15735-1Q) /CSM_Contig/Conti...   450  e-126
Contig-U16505-1 (Contig-U16505-1Q) /CSM_Contig/Conti...    86  2e-16
Contig-U16504-1 (Contig-U16504-1Q) /CSM_Contig/Conti...    86  2e-16
Contig-U06663-1 (Contig-U06663-1Q) /CSM_Contig/Conti...    78  4e-14

>Contig-U15499-1 (Contig-U15499-1Q) /CSM_Contig/Contig-U15499-1Q.Seq.d
          Length = 1253

 Score = 2327 bits (1174), Expect = 0.0
 Identities = 1188/1195 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggattattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcactta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggattattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcactta 60

                                                                        
Query: 61   agtgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agtgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactat 120

                                                                        
Query: 121  ggcaaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaattt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ggcaaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaattt 180

                                                                        
Query: 181  ctcaaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ctcaaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattc 240

                                                                        
Query: 241  tcatacatattaaatatatttttaaaatcaacaatgtctgaagaaattgaatttaaattg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tcatacatattaaatatatttttaaaatcaacaatgtctgaagaaattgaatttaaattg 300

                                                                        
Query: 301  gagttattaaaacttgaaaaagaacatcaagaaaagttagagaaagaagggtataaacaa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gagttattaaaacttgaaaaagaacatcaagaaaagttagagaaagaagggtataaacaa 360

                                                                        
Query: 361  attactattggaaaaggttacactgttttaagtaaagaagaaaagcctttacaatcggtt 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  attactattggaaaaggttacactgttttaagtaaagaagaaaagcctttacaatcggtt 420

                                                                        
Query: 421  tcttccttcaataatccaaaaaacgtatttaatttggaccaagctcaaactgctaatacc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tcttccttcaataatccaaaaaacgtatttaatttggaccaagctcaaactgctaatacc 480

                                                                        
Query: 481  aattttgccattgatcgtcatattaaaatgaaagttccaccagatccattggtttttatt 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  aattttgccattgatcgtcatattaaaatgaaagttccaccagatccattggtttttatt 540

                                                                        
Query: 541  aaaatgcctcgatcaaaattagtttgggcatgggtgaagatctctacaggtagttcaact 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  aaaatgcctcgatcaaaattagtttgggcatgggtgaagatctctacaggtagttcaact 600

                                                                        
Query: 601  actagtttaataggcagttttactccttgtgctgcatatatgagatacattaaatcatat 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  actagtttaataggcagttttactccttgtgctgcatatatgagatacattaaatcatat 660

                                                                        
Query: 661  ccagttgttggtaccgttgaacaaactatggaaaagaaaaaaggctttacttcaagattt 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  ccagttgttggtaccgttgaacaaactatggaaaagaaaaaaggctttacttcaagattt 720

                                                                        
Query: 721  aatgccagtactgaaattaaggcaagtgcatcagcagggttctttggttgtgaagcatca 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  aatgccagtactgaaattaaggcaagtgcatcagcagggttctttggttgtgaagcatca 780

                                                                        
Query: 781  ctcgaagtgaccactggtttcgaatatgaagaaactgttacatcagagacaactcacaca 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  ctcgaagtgaccactggtttcgaatatgaagaaactgttacatcagagacaactcacaca 840

                                                                        
Query: 841  tggaaacaaactctcactgagggaacttatattgtttatcaaaatgttcttgtttatgca 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  tggaaacaaactctcactgagggaacttatattgtttatcaaaatgttcttgtttatgca 900

                                                                        
Query: 901  tatacaatagtattatcactaaatcaaactaatactataaatcaatataacccaggtatg 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  tatacaatagtattatcactaaatcaaactaatactataaatcaatataacccaggtatg 960

                                                                        
Query: 961  aatttgagatatatccaacaaatagatcgtgctgttatgtttgtaccaatcaatcgtgat 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  aatttgagatatatccaacaaatagatcgtgctgttatgtttgtaccaatcaatcgtgat 1020

                                                                        
Query: 1021 gatccattcactcttcgttatcaagatgccacatgggatccagtggagtatgattcatta 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gatccattcactcttcgttatcaagatgccacatgggatccagtggagtatgattcatta 1080

                                                                        
Query: 1081 attaactatttggttgcaaatccaagtaaatggagatctgattcataaagaaataaccnn 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 1081 attaactatttggttgcaaatccaagtaaatggagatctgattcataaagaaataaccaa 1140

                                                                   
Query: 1141 nnnnnggttttaaataataaaatcatgatttttattatttcactattatgtcaat 1195
                 ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaaaggttttaaataataaaatcatgatttttattatttcactattatgtcaat 1195


 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                        
Query: 1226 aaaatagaaaatacaagataattattat 1253
            ||||||||||||||||||||||||||||
Sbjct: 1226 aaaatagaaaatacaagataattattat 1253


>Contig-U15897-1 (Contig-U15897-1Q) /CSM_Contig/Contig-U15897-1Q.Seq.d
          Length = 2889

 Score =  488 bits (246), Expect = e-137
 Identities = 246/246 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 60

                                                                       
Query: 63  tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 120

                                                                       
Query: 123 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 180

                                                                       
Query: 183 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 240

                 
Query: 243 atacat 248
           ||||||
Sbjct: 241 atacat 246


>Contig-U15761-1 (Contig-U15761-1Q) /CSM_Contig/Contig-U15761-1Q.Seq.d
          Length = 4883

 Score =  488 bits (246), Expect = e-137
 Identities = 246/246 (100%)
 Strand = Plus / Plus

                                                                        
Query: 3    attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 62
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 attattgtgtttttaacacattaacaacatccttctttgacttaagcttcatcacttaag 2244

                                                                        
Query: 63   tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 tgtaacgtcagatgaaacaccagaatcatatttcacagtaagggtgcgatttcactatgg 2304

                                                                        
Query: 123  caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 caaaggataaaacgataggatcgatcgcgagcaattgcagatctcccgtgcagaatttct 2364

                                                                        
Query: 183  caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 caaatttggtgttaacgctggagaaatcctagaatgatatcaccgatacaaaccattctc 2424

                  
Query: 243  atacat 248
            ||||||
Sbjct: 2425 atacat 2430


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,999
Number of Sequences: 8402
Number of extensions: 24999
Number of successful extensions: 2481
Number of sequences better than 10.0: 251
length of query: 1253
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1237
effective length of database: 7,941,110
effective search space: 9823153070
effective search space used: 9823153070
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.29
Homology vs DNA 
Query= Contig-U15499-1 (Contig-U15499-1Q) /CSM_Contig/Contig-U15499-1Q.Seq.d
         (1253 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ437106) Dictyostelium discoideum cDNA clone:ddv33p03, 3' ...  1407   0.0    2
(BJ446377) Dictyostelium discoideum cDNA clone:ddv62d14, 3' ...  1396   0.0    2
(BJ432467) Dictyostelium discoideum cDNA clone:ddv18d19, 3' ...  1346   0.0    2
(BJ430721) Dictyostelium discoideum cDNA clone:ddv8p09, 3' e...  1298   0.0    1
(BJ441848) Dictyostelium discoideum cDNA clone:ddv48f04, 3' ...  1294   0.0    3
(BJ441291) Dictyostelium discoideum cDNA clone:ddv46c10, 3' ...  1271   0.0    1
(BJ416094) Dictyostelium discoideum cDNA clone:ddv24o19, 5' ...  1265   0.0    1
(BJ421653) Dictyostelium discoideum cDNA clone:ddv43k12, 5' ...  1243   0.0    1
(BJ434502) Dictyostelium discoideum cDNA clone:ddv24f05, 3' ...  1235   0.0    3
(BJ413409) Dictyostelium discoideum cDNA clone:ddv15o11, 5' ...  1235   0.0    1
(BJ423099) Dictyostelium discoideum cDNA clone:ddv48f04, 5' ...  1233   0.0    1
(BJ440343) Dictyostelium discoideum cDNA clone:ddv43k12, 3' ...  1227   0.0    2
(BJ438313) Dictyostelium discoideum cDNA clone:ddv37e15, 3' ...  1225   0.0    2
(BJ412437) Dictyostelium discoideum cDNA clone:ddv8p09, 5' e...  1197   0.0    1
(C83934) Dictyostelium discoideum slug cDNA, clone SSA683.       1162   0.0    5
(BJ415886) Dictyostelium discoideum cDNA clone:ddv24f05, 5' ...  1110   0.0    1
(BJ418099) Dictyostelium discoideum cDNA clone:ddv31l13, 5' ...  1102   0.0    1
(BJ428620) Dictyostelium discoideum cDNA clone:ddv12j14, 3' ...  1100   0.0    2
(BJ419888) Dictyostelium discoideum cDNA clone:ddv37e15, 5' ...  1094   0.0    1
(BJ431824) Dictyostelium discoideum cDNA clone:ddv15p13, 3' ...  1088   0.0    5
(BJ414325) Dictyostelium discoideum cDNA clone:ddv18d19, 5' ...  1082   0.0    1
(BJ410456) Dictyostelium discoideum cDNA clone:ddv12j14, 5' ...  1080   0.0    1
(X94341) D.discoideum mRNA for unknown protein with homology...   692   0.0    3
(AU076381) Dictyostelium discoideum slug cDNA, clone SSA683.     1068   0.0    1
(AU262120) Dictyostelium discoideum vegetative cDNA clone:VS...  1039   0.0    2
(BJ422989) Dictyostelium discoideum cDNA clone:ddv47o16, 5' ...   898   0.0    2
(BJ422987) Dictyostelium discoideum cDNA clone:ddv47o14, 5' ...   898   0.0    2
(BJ441742) Dictyostelium discoideum cDNA clone:ddv47o16, 3' ...   898   0.0    2
(BJ441740) Dictyostelium discoideum cDNA clone:ddv47o14, 3' ...   898   0.0    2
(BJ431758) Dictyostelium discoideum cDNA clone:ddv15o11, 3' ...   882   0.0    2
(BJ434776) Dictyostelium discoideum cDNA clone:ddv24o19, 3' ...   803   0.0    3
(BJ413478) Dictyostelium discoideum cDNA clone:ddv15p13, 5' ...   666   0.0    1
(AU272457) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   545   e-150  1
(AU272456) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   545   e-150  1
(AU271954) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   545   e-150  1
(AU271953) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   545   e-150  1
(AU271900) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   545   e-150  1
(AU271899) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   545   e-150  1
(AU271425) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   543   e-150  1
(AU272498) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   539   e-149  1
(AU272111) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   539   e-149  1
(BJ445201) Dictyostelium discoideum cDNA clone:ddv58c21, 3' ...   519   e-148  2
(AU271424) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   537   e-148  1
(BJ426376) Dictyostelium discoideum cDNA clone:ddv58c21, 5' ...   511   e-147  2
(AU272383) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   531   e-146  1
(AU272110) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   355   e-139  2
(BJ413129) Dictyostelium discoideum cDNA clone:ddv14d12, 5' ...   492   e-134  1
(BJ416614) Dictyostelium discoideum cDNA clone:ddv26p24, 5' ...   488   e-133  1
(BJ415706) Dictyostelium discoideum cDNA clone:ddv23o10, 5' ...   488   e-133  1
(BJ396357) Dictyostelium discoideum cDNA clone:dds42k18, 5' ...   488   e-133  1
(BJ365960) Dictyostelium discoideum cDNA clone:ddc37o04, 5' ...   488   e-133  1
(BJ327787) Dictyostelium discoideum cDNA clone:dda21c22, 5' ...   488   e-133  1
(BJ325353) Dictyostelium discoideum cDNA clone:dda14b06, 5' ...   488   e-133  1
(AU073960) Dictyostelium discoideum slug cDNA, clone SSI876.      468   e-127  1
(AU271959) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   466   e-126  1
(AU272382) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   341   e-126  2
(BJ424476) Dictyostelium discoideum cDNA clone:ddv52f14, 5' ...   450   e-122  1
(BJ414068) Dictyostelium discoideum cDNA clone:ddv17p22, 5' ...   442   e-119  1
(BJ426476) Dictyostelium discoideum cDNA clone:ddv59k05, 5' ...   440   e-119  1
(AU272497) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   256   e-118  2
(BJ438339) Dictyostelium discoideum cDNA clone:ddv37j16, 3' ...   402   e-113  2
(BJ419913) Dictyostelium discoideum cDNA clone:ddv37j16, 5' ...   396   e-112  2
(BJ425973) Dictyostelium discoideum cDNA clone:ddv57o13, 5' ...   299   1e-76  1
(BJ446356) Dictyostelium discoideum cDNA clone:ddv62o12, 3' ...    86   2e-55  6
(BJ437057) Dictyostelium discoideum cDNA clone:ddv33f02, 3' ...    86   2e-55  6
(BJ431471) Dictyostelium discoideum cDNA clone:ddv14d12, 3' ...   210   9e-50  1
(U48706) Dictyostelium discoideum small aggregate formation ...    86   2e-49  6
(BJ431991) Dictyostelium discoideum cDNA clone:ddv17c11, 3' ...    86   1e-47  6
(BJ418564) Dictyostelium discoideum cDNA clone:ddv33p03, 5' ...   196   1e-45  1
(C90354) Dictyostelium discoideum slug cDNA, clone SSI291.         86   7e-45  7
(BJ432381) Dictyostelium discoideum cDNA clone:ddv18d15, 3' ...    86   2e-42  6
(BJ436350) Dictyostelium discoideum cDNA clone:ddv30k24, 3' ...    74   3e-42  6
(BJ433068) Dictyostelium discoideum cDNA clone:ddv20n15, 3' ...    86   2e-41  6
(AU271960) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   180   8e-41  1
(AU270379) Dictyostelium discoideum vegetative cDNA clone:VS...    86   3e-39  5
(AU262794) Dictyostelium discoideum vegetative cDNA clone:VS...    86   3e-39  5
(AU271094) Dictyostelium discoideum vegetative cDNA clone:VS...    86   3e-39  5
(AU264944) Dictyostelium discoideum vegetative cDNA clone:VS...    86   4e-39  5
(AU264210) Dictyostelium discoideum vegetative cDNA clone:VS...    86   4e-39  5
(BJ442379) Dictyostelium discoideum cDNA clone:ddv49n16, 3' ...    86   4e-39  5
(AU261620) Dictyostelium discoideum vegetative cDNA clone:VS...    86   4e-39  5
(BJ430140) Dictyostelium discoideum cDNA clone:ddv6p03, 3' e...    86   5e-39  5
(C90264) Dictyostelium discoideum slug cDNA, clone SSI515.         86   5e-39  5
(AU269152) Dictyostelium discoideum vegetative cDNA clone:VS...    86   1e-38  5
(AU271093) Dictyostelium discoideum vegetative cDNA clone:VS...    78   2e-37  5
(BJ413879) Dictyostelium discoideum cDNA clone:ddv17c11, 5' ...    78   3e-37  5
(AU269151) Dictyostelium discoideum vegetative cDNA clone:VS...    52   1e-34  6
(C91394) Dictyostelium discoideum slug cDNA, clone SSK163.         86   1e-31  5
(BJ429985) Dictyostelium discoideum cDNA clone:ddv5k18, 3' e...    86   2e-30  4
(AU268260) Dictyostelium discoideum vegetative cDNA clone:VS...    86   3e-30  4
(AU270481) Dictyostelium discoideum vegetative cDNA clone:VS...    86   3e-30  4
(AU263169) Dictyostelium discoideum vegetative cDNA clone:VS...    86   4e-30  4
(C92737) Dictyostelium discoideum slug cDNA, clone SSF175.         86   4e-30  4
(C90480) Dictyostelium discoideum slug cDNA, clone SSI586.         86   4e-30  4
(AU268477) Dictyostelium discoideum vegetative cDNA clone:VS...    86   5e-28  4
(AU261868) Dictyostelium discoideum vegetative cDNA clone:VS...    86   2e-26  3
(AU038088) Dictyostelium discoideum slug cDNA, clone SSH256.       86   2e-26  3
(AU262409) Dictyostelium discoideum vegetative cDNA clone:VS...    86   2e-26  3
(AU265313) Dictyostelium discoideum vegetative cDNA clone:VS...    86   2e-25  3
(AU264209) Dictyostelium discoideum vegetative cDNA clone:VS...    78   1e-24  4
(BJ411890) Dictyostelium discoideum cDNA clone:ddv6p03, 5' e...    78   2e-24  4
(AU262207) Dictyostelium discoideum vegetative cDNA clone:VS...    86   7e-23  3
(AU262809) Dictyostelium discoideum vegetative cDNA clone:VS...    86   5e-22  3
(BJ414247) Dictyostelium discoideum cDNA clone:ddv18d15, 5' ...    80   7e-22  3
(AU264943) Dictyostelium discoideum vegetative cDNA clone:VS...    78   2e-21  3
(AU268476) Dictyostelium discoideum vegetative cDNA clone:VS...    78   2e-21  3
(AU270378) Dictyostelium discoideum vegetative cDNA clone:VS...    78   2e-21  3
(AU265312) Dictyostelium discoideum vegetative cDNA clone:VS...    78   2e-21  3
(AU268259) Dictyostelium discoideum vegetative cDNA clone:VS...    78   2e-21  3
(BJ414867) Dictyostelium discoideum cDNA clone:ddv20n15, 5' ...    78   2e-21  3
(AU262540) Dictyostelium discoideum vegetative cDNA clone:VS...    86   1e-19  3
(BJ417129) Dictyostelium discoideum cDNA clone:ddv29e16, 5' ...    78   1e-19  3
(BJ427448) Dictyostelium discoideum cDNA clone:ddv62o12, 5' ...    80   6e-19  3
(AU270480) Dictyostelium discoideum vegetative cDNA clone:VS...    80   2e-18  2
(AU264571) Dictyostelium discoideum vegetative cDNA clone:VS...    86   2e-18  2
(AU264841) Dictyostelium discoideum vegetative cDNA clone:VS...    86   4e-12  1
(AU264230) Dictyostelium discoideum vegetative cDNA clone:VS...    86   4e-12  1
(AU264229) Dictyostelium discoideum vegetative cDNA clone:VS...    86   4e-12  1
(BJ420819) Dictyostelium discoideum cDNA clone:ddv40e15, 5' ...    86   4e-12  1
(BJ439463) Dictyostelium discoideum cDNA clone:ddv40e15, 3' ...    82   6e-11  1
(M19469) Dictyostelium discoideum 109 gene 3, complete cds.        78   9e-10  1
(AU263382) Dictyostelium discoideum vegetative cDNA clone:VS...    78   9e-10  1
(BJ417525) Dictyostelium discoideum cDNA clone:ddv30k24, 5' ...    76   4e-09  1
(AU264842) Dictyostelium discoideum vegetative cDNA clone:VS...    68   9e-07  1
(BJ418526) Dictyostelium discoideum cDNA clone:ddv33f02, 5' ...    60   2e-04  1
(AL928908) Zebrafish DNA sequence from clone DKEY-221L4 in l...    34   0.030  9
(AC189503) Brassica rapa subsp. pekinensis clone KBrB087P03,...    38   0.17   7
(BX957319) Zebrafish DNA sequence from clone CH211-113J14 in...    50   0.20   1
(BX119909) Zebrafish DNA sequence from clone CH211-223I3 in ...    50   0.20   1
(BX546443) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    50   0.20   1
(AL975715) Danio rerio genomic clone DKEY-36L6, genomic surv...    50   0.20   1
(BH681518) BOHXS12TF BO_2_3_KB Brassica oleracea genomic clo...    50   0.20   1
(BZ053765) jnr40h07.b1 B.oleracea001 Brassica oleracea genom...    38   0.21   2
(DU128423) KBrH113D23R Brassica rapa BAC library KBrH Brassi...    38   0.21   2
(CT012372) KBrH120B17 genomic clone, KBrH (HindIII) BAC libr...    38   0.27   2
(DX910756) KBrH047H22R KBrH, Brassica rapa HindIII BAC libra...    38   0.30   2
(AM454819) Vitis vinifera contig VV78X276955.4, whole genome...    40   0.46   3
(EI421118) PV_GBa0009H12.r PV_GBa Phaseolus vulgaris genomic...    36   0.57   2
(EI313863) GM_WBc0046D13.f GM_WBc Glycine max genomic clone ...    38   0.58   2
(AC218563) Bos taurus clone CH240-311E21, WORKING DRAFT SEQU...    40   0.61   4
(AC213558) Equus caballus clone CH241-380M7, WORKING DRAFT S...    48   0.80   1
(FH898048) CHO_ONF055xh08f1.ab1 CHO_ONF Nicotiana tabacum ge...    48   0.80   1
(BH488573) BOGXU02TR BOGX Brassica oleracea genomic clone BO...    40   0.90   2
(AM431379) Vitis vinifera contig VV78X260460.3, whole genome...    40   1.2    2
(AJ859175) Brassica rapa subsp. pekinensis GSS, clone KBrH05...    40   1.3    2
(AC144419) Rattus norvegicus clone CH230-491I24, WORKING DRA...    36   1.3    6
(AC174876) Strongylocentrotus purpuratus clone R3-1107N22, W...    34   1.4    6
(AM476353) Vitis vinifera contig VV78X083343.2, whole genome...    38   1.7    2
(AC123967) Sminthopsis macroura clone 102C13, complete seque...    36   1.8    4
(AC189583) Brassica rapa subsp. pekinensis clone KBrH012D09,...    38   2.1    5
(CU501919) Theobroma cacao, mRNA sequence (KZ0ABP3YB03FM1).        32   2.2    2
(CU844336) A BAC library has been constructed from PN40024 g...    40   2.6    2
(BZ005174) oei83h03.b1 B.oleracea002 Brassica oleracea genom...    36   2.8    2
(EJ366452) 1092963707377 Global-Ocean-Sampling_GS-28-01-01-1...    34   2.8    3
(BZ005159) oei83h08.b1 B.oleracea002 Brassica oleracea genom...    36   2.9    2
(BH938064) odf11f08.b1 B.oleracea002 Brassica oleracea genom...    36   2.9    2
(AC209321) MACACA MULATTA BAC clone CH250-211C9 from chromos...    46   3.2    1
(AC198146) Nomascus leucogenys BAC clone CH271-385O23 from c...    46   3.2    1
(AC215650) Populus trichocarpa clone POP108-K22, complete se...    46   3.2    1
(AC185364) Populus trichocarpa clone Pop1-63B23, complete se...    46   3.2    1
(AC151163) Bos taurus clone CH240-479N6, WORKING DRAFT SEQUE...    46   3.2    1
(AC224558) Bos taurus clone CH240-481M11, WORKING DRAFT SEQU...    46   3.2    1
(AC200776) Triticum aestivum clone TAACSPALLhA_0593O07, *** ...    46   3.2    1
(AC197804) Macaca mulatta chromosome UNK clone CH250-236F10,...    46   3.2    1
(AC190976) Zea mays chromosome 3 clone CH201-476F13; ZMMBBc0...    46   3.2    1
(AC189777) Zea mays chromosome unknown clone CH201-159H22; Z...    46   3.2    1
(CC445510) PUHCP02TB ZM_0.6_1.0_KB Zea mays genomic clone ZM...    46   3.2    1
(CP000409) Rickettsia canadensis str. McKiel, complete genome.     46   3.2    1
(DQ927305) Tetrahymena pigmentosa strain UM1060 mitochondrio...    42   3.2    4
(AC093793) Homo sapiens BAC clone RP11-272O16 from 4, comple...    42   3.3    6
(AC160281) Bos taurus clone CH240-83N9, WORKING DRAFT SEQUEN...    42   3.7    3
(DX910749) KBrH047H18F KBrH, Brassica rapa HindIII BAC libra...    38   4.0    2
(AE014296) Drosophila melanogaster chromosome 3L, complete s...    34   4.0    2
(CU914226) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   4.8    4
(AL355609) Human DNA sequence from clone RP11-282D7 on chrom...    34   4.9    7
(AC210550) Populus trichocarpa clone POP049-H01, complete se...    32   5.3    7
(AC232515) Brassica rapa subsp. pekinensis clone KBrB067M19,...    40   5.4    7
(AC010115) Drosophila melanogaster 3L BAC RP98-16I16 (Roswel...    34   5.9    2
(AC017764) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    34   6.3    2
(AC232475) Brassica rapa subsp. pekinensis clone KBrB030K23,...    38   7.8    5
(BE460238) EST411729 tomato breaker fruit, TIGR Solanum lyco...    36   7.9    2
(AM429557) Vitis vinifera contig VV78X267626.5, whole genome...    42   8.0    3
(BH501248) BOHRR21TF BOHR Brassica oleracea genomic clone BO...    34   8.0    2
(EY051957) CATC3466.fwd CATC Artemisia annua, Tanzanian, fro...    32   8.2    2
(EY051956) CATC3466.rev CATC Artemisia annua, Tanzanian, fro...    32   8.2    2
(AM439839) Vitis vinifera contig VV78X236146.14, whole genom...    38   8.4    3
(DU980985) KBrH068J13F KBrH (HindIII) BAC library Brassica r...    40   8.8    2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    34   8.9    17
(DU116372) KBrH099L13F Brassica rapa BAC library KBrH Brassi...    40   9.4    2
(AY427938) Aphidius ervi isolate WAWH9 cytochrome oxidase su...    40   9.8    2
(AY427937) Aphidius ervi isolate WAWH6 cytochrome oxidase su...    40   9.8    2
(AY427936) Aphidius ervi isolate WAWH5 cytochrome oxidase su...    40   9.8    2
(AY427935) Aphidius ervi isolate WAWH4 cytochrome oxidase su...    40   9.8    2
(AY427934) Aphidius ervi isolate WAWH3 cytochrome oxidase su...    40   9.8    2
(AY427933) Aphidius ervi isolate WAP3 cytochrome oxidase sub...    40   9.8    2
(AY427932) Aphidius ervi isolate WAP2 cytochrome oxidase sub...    40   9.8    2
(AY427931) Aphidius ervi isolate WAO3 cytochrome oxidase sub...    40   9.8    2
(AY427930) Aphidius ervi isolate WAO2 cytochrome oxidase sub...    40   9.8    2
(AY427929) Aphidius ervi isolate WAML4 cytochrome oxidase su...    40   9.8    2
(AY427928) Aphidius ervi isolate WAML3 cytochrome oxidase su...    40   9.8    2
(AY427927) Aphidius ervi isolate WAML2 cytochrome oxidase su...    40   9.8    2
(AY427926) Aphidius ervi isolate WAML1 cytochrome oxidase su...    40   9.8    2
(AY427925) Aphidius ervi isolate UK5 cytochrome oxidase subu...    40   9.8    2
(AY427924) Aphidius ervi isolate Turkey10 cytochrome oxidase...    40   9.8    2
(AY427923) Aphidius ervi isolate ORW1 cytochrome oxidase sub...    40   9.8    2
(AY427922) Aphidius ervi isolate ORM5 cytochrome oxidase sub...    40   9.8    2
(AY427921) Aphidius ervi isolate ORM4 cytochrome oxidase sub...    40   9.8    2
(AY427920) Aphidius ervi isolate ORM3 cytochrome oxidase sub...    40   9.8    2
(AY427919) Aphidius ervi isolate ORM2 cytochrome oxidase sub...    40   9.8    2
(AY427918) Aphidius ervi isolate ORCCA31 cytochrome oxidase ...    40   9.8    2
(AY427917) Aphidius ervi isolate ORCC21 cytochrome oxidase s...    40   9.8    2
(AY427916) Aphidius ervi isolate NYL5 cytochrome oxidase sub...    40   9.8    2
(AY427915) Aphidius ervi isolate NYL4 cytochrome oxidase sub...    40   9.8    2
(AY427914) Aphidius ervi isolate NYL3 cytochrome oxidase sub...    40   9.8    2
(AY427913) Aphidius ervi isolate NYL2 cytochrome oxidase sub...    40   9.8    2
(AY427912) Aphidius ervi isolate NYG5 cytochrome oxidase sub...    40   9.8    2
(AY427910) Aphidius ervi isolate NYG2 cytochrome oxidase sub...    40   9.8    2
(AY427909) Aphidius ervi isolate MoroccoZ10 cytochrome oxida...    40   9.8    2
(AY427908) Aphidius ervi isolate JapanNagano2 cytochrome oxi...    40   9.8    2
(AY427907) Aphidius ervi isolate HU49 cytochrome oxidase sub...    40   9.8    2
(AY427906) Aphidius ervi isolate HU47 cytochrome oxidase sub...    40   9.8    2
(AY427905) Aphidius ervi isolate HU46 cytochrome oxidase sub...    40   9.8    2
(AY427904) Aphidius ervi isolate HU45 cytochrome oxidase sub...    40   9.8    2
(AY427903) Aphidius ervi isolate FRC3 cytochrome oxidase sub...    40   9.8    2
(AY427902) Aphidius ervi isolate FR8 cytochrome oxidase subu...    40   9.8    2
(AY427901) Aphidius ervi isolate FR7 cytochrome oxidase subu...    40   9.8    2
(AY427900) Aphidius ervi isolate FR6 cytochrome oxidase subu...    40   9.8    2
(AY427899) Aphidius ervi isolate FR5 cytochrome oxidase subu...    40   9.8    2
(AY427898) Aphidius ervi isolate FR3 cytochrome oxidase subu...    40   9.8    2
(AY427897) Aphidius ervi isolate COM5 cytochrome oxidase sub...    40   9.8    2
(AY427896) Aphidius ervi isolate COM4 cytochrome oxidase sub...    40   9.8    2
(AY427895) Aphidius ervi isolate COM2 cytochrome oxidase sub...    40   9.8    2
(AY427894) Aphidius ervi isolate CAR5 cytochrome oxidase sub...    40   9.8    2
(AY427893) Aphidius ervi isolate CAR4 cytochrome oxidase sub...    40   9.8    2
(AY427892) Aphidius ervi isolate CAR2 cytochrome oxidase sub...    40   9.8    2
(AY427891) Aphidius ervi isolate CAR1 cytochrome oxidase sub...    40   9.8    2
(AY427890) Aphidius ervi isolate CAG5 cytochrome oxidase sub...    40   9.8    2
(AY427889) Aphidius ervi isolate CAG4 cytochrome oxidase sub...    40   9.8    2
(AY427888) Aphidius ervi isolate CAG3 cytochrome oxidase sub...    40   9.8    2
(AY427887) Aphidius ervi isolate CAG2 cytochrome oxidase sub...    40   9.8    2
(AY262787) Aphidius ervi clone Wash3 mitochondrial cytochrom...    40   9.8    2
(AY262786) Aphidius ervi clone France2 mitochondrial cytochr...    40   9.8    2
(AY262785) Aphidius ervi clone France1 mitochondrial cytochr...    40   9.8    2
(AY262784) Aphidius ervi clone Colorado mitochondrial cytoch...    40   9.8    2
(AY262780) Aphidius ervi clone AerKop1 mitochondrial cytochr...    40   9.8    2
(FI225017) CccaBa037-C16TV CccABa Cajanus cajan genomic clon...    42   9.9    2
(AY262783) Aphidius ervi clone ChileA mitochondrial cytochro...    40   9.9    2
(AY262782) Aphidius ervi clone ArgCas mitochondrial cytochro...    40   9.9    2
(AY262781) Aphidius ervi clone ArgTre mitochondrial cytochro...    40   9.9    2
(AY262779) Aphidius ervi clone Wash1 mitochondrial cytochrom...    40   9.9    2
(AY262778) Aphidius ervi clone Calif1 mitochondrial cytochro...    40   9.9    2
(AY262777) Aphidius ervi clone Norway mitochondrial cytochro...    40   9.9    2
(AY262776) Aphidius ervi clone Calif2 mitochondrial cytochro...    40   9.9    2
(AY262775) Aphidius ervi clone OregonM mitochondrial cytochr...    40   9.9    2
(AY262774) Aphidius ervi clone Japan2 mitochondrial cytochro...    40   9.9    2
(AY262773) Aphidius ervi clone Morocco2 mitochondrial cytoch...    40   9.9    2
(AY262772) Aphidius ervi clone Hungary mitochondrial cytochr...    40   9.9    2
(AY262771) Aphidius ervi clone UK1 mitochondrial cytochrome ...    40   9.9    2
(AY262770) Aphidius ervi clone Ecuador1 mitochondrial cytoch...    40   9.9    2
(AY262769) Aphidius ervi clone Japan1 mitochondrial cytochro...    40   9.9    2
(AY262768) Aphidius ervi clone Germany mitochondrial cytochr...    40   9.9    2
(AY262767) Aphidius ervi clone Israel mitochondrial cytochro...    40   9.9    2
(AY262766) Aphidius ervi clone NewYork mitochondrial cytochr...    40   9.9    2
(AY262765) Aphidius ervi clone ChileF mitochondrial cytochro...    40   9.9    2
(AY262764) Aphidius ervi clone Turkey mitochondrial cytochro...    40   9.9    2
(AY262763) Aphidius ervi clone Italy mitochondrial cytochrom...    40   9.9    2
(AY262762) Aphidius ervi clone Wash2 mitochondrial cytochrom...    40   9.9    2

>(BJ437106) Dictyostelium discoideum cDNA clone:ddv33p03, 3' end,
            single read.
          Length = 746

 Score = 1407 bits (710), Expect(2) = 0.0
 Identities = 710/710 (100%)
 Strand = Plus / Minus


Query: 429  caataatccaaaaaacgtatttaatttggaccaagctcaaactgctaataccaattttgc 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746  caataatccaaaaaacgtatttaatttggaccaagctcaaactgctaataccaattttgc 687


Query: 489  cattgatcgtcatattaaaatgaaagttccaccagatccattggtttttattaaaatgcc 548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686  cattgatcgtcatattaaaatgaaagttccaccagatccattggtttttattaaaatgcc 627


Query: 549  tcgatcaaaattagtttgggcatgggtgaagatctctacaggtagttcaactactagttt 608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626  tcgatcaaaattagtttgggcatgggtgaagatctctacaggtagttcaactactagttt 567


Query: 609  aataggcagttttactccttgtgctgcatatatgagatacattaaatcatatccagttgt 668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566  aataggcagttttactccttgtgctgcatatatgagatacattaaatcatatccagttgt 507


Query: 669  tggtaccgttgaacaaactatggaaaagaaaaaaggctttacttcaagatttaatgccag 728
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506  tggtaccgttgaacaaactatggaaaagaaaaaaggctttacttcaagatttaatgccag 447


Query: 729  tactgaaattaaggcaagtgcatcagcagggttctttggttgtgaagcatcactcgaagt 788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446  tactgaaattaaggcaagtgcatcagcagggttctttggttgtgaagcatcactcgaagt 387


Query: 789  gaccactggtttcgaatatgaagaaactgttacatcagagacaactcacacatggaaaca 848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386  gaccactggtttcgaatatgaagaaactgttacatcagagacaactcacacatggaaaca 327


Query: 849  aactctcactgagggaacttatattgtttatcaaaatgttcttgtttatgcatatacaat 908
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326  aactctcactgagggaacttatattgtttatcaaaatgttcttgtttatgcatatacaat 267


Query: 909  agtattatcactaaatcaaactaatactataaatcaatataacccaggtatgaatttgag 968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266  agtattatcactaaatcaaactaatactataaatcaatataacccaggtatgaatttgag 207


Query: 969  atatatccaacaaatagatcgtgctgttatgtttgtaccaatcaatcgtgatgatccatt 1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206  atatatccaacaaatagatcgtgctgttatgtttgtaccaatcaatcgtgatgatccatt 147


Query: 1029 cactcttcgttatcaagatgccacatgggatccagtggagtatgattcattaattaacta 1088
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146  cactcttcgttatcaagatgccacatgggatccagtggagtatgattcattaattaacta 87


Query: 1089 tttggttgcaaatccaagtaaatggagatctgattcataaagaaataacc 1138
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86   tttggttgcaaatccaagtaaatggagatctgattcataaagaaataacc 37

 Score = 40.1 bits (20), Expect(2) = 0.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 1146 ggttttaaataataaaatca 1165
            ||||||||||||||||||||
Sbjct: 29   ggttttaaataataaaatca 10

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,534,320,127
Number of extensions: 98874414
Number of successful extensions: 8053573
Number of sequences better than 10.0: 267
Length of query: 1253
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1229
Effective length of database: 96,409,374,237
Effective search space: 118487120937273
Effective search space used: 118487120937273
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.16
Homology vs Protein 
Query= Contig-U15499-1 (Contig-U15499-1Q) /CSM_Contig/Contig-U15499-1Q.Seq.d
         (1253 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromoso...    62   6e-08
AC116330_41(AC116330|pid:none) Dictyostelium discoideum chromoso...    58   8e-07
CP000712_1048(CP000712|pid:none) Pseudomonas putida F1, complete...    46   0.003
AE017226_1555(AE017226|pid:none) Treponema denticola ATCC 35405,...    35   7.4

>AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromosome 2
            map 3191214-3323468 strain AX4, complete sequence.
            &AC116330_44(AC116330|pid:none)
          Length = 235

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
 Frame = +1

Query: 448  FNLDQAQTANTNFAIDRHIKMKVPPDPLVFIKMPRSKLVWAWVKXXXXXXXXXXXXXXXP 627
            F+L+  +  + N   D   KM  P +P V I    S     ++K               P
Sbjct: 16   FSLNNLKIVDNNHDADWLTKMNNPIEPAVIINNQTSSSGTVFLKTDQYPNGADVKFNVKP 75

Query: 628  CAAYMRYIKSYPVVGTVEQTMEKKKGFTSRFNASTEIKASASAGF--FGCEASLEVTTGF 801
            C + + + ++  +      T+ K   F+      +  K +   G+  F  EA  +    F
Sbjct: 76   CGSLVEFQQTLNITTPNYYTISKSTSFSKHVQGDSNFK-NGHKGYIPFDFEAKFKFIRKF 134

Query: 802  EYEETVTSETTHTWKQTLTEGTYIVYQNVLVYAYTIVLSLNQTNTINQYNPGMNLRYIQQ 981
            EY     SET  ++ Q L+  +Y V+Q+++ YAY ++ S++    + Q NP  + ++I
Sbjct: 135  EYSADFYSETKTSYSQYLSTTSY-VHQSLVTYAYKMIDSIDH-RRLAQLNPDFDWKFIG- 191

Query: 982  IDRAVMFVPINRDDPFTLRYQDATWDPVEYDSLINYLVANPSKW 1113
             +    FV I  ++   +R  D+ +  ++ +  INYL  + + W
Sbjct: 192  -NDLYFFVSIYSNNQI-IRSYDSKYQMIDENDFINYLANHRNLW 233

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,964,399,546
Number of extensions: 37952586
Number of successful extensions: 95453
Number of sequences better than 10.0: 4
Number of HSP's gapped: 95424
Number of HSP's successfully gapped: 4
Length of query: 417
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 286
Effective length of database: 627,191,635
Effective search space: 179376807610
Effective search space used: 179376807610
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.87  gvh: 0.39  alm: 0.36  top: 0.17  tms: 0.00  mit: 0.33  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: extracellular, including cell wall
	  8.0 %: mitochondrial
	  8.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U15499-1 is cyt
VS (DIR, S) 28
VH (FL, L) 11
VF (FL, S) 9
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 8
FC-IC (SUB) 8