Contig-U15498-1
Contig ID Contig-U15498-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15498-1 (Contig-U15498-1Q) /CSM_Contig/Contig-U15498-1Q.Seq.d
ATTTTTATATTTTGTTATTTATTTTTTCCTAACCAACGAGTGTCTAACCG
TTATTTATAATATTATATATATAATTGATTTTGTTTGTTTTTTTTTTTTN
GGGCCGGGAAAAAAAAAATTAAAAAAAAANTAAAATTTANGGGAAAANA

Gap no gap
Contig length 149
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7790156
End point 7790008
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U15498
List of clone(s)

est1=VHP643F,1,149
Translated Amino Acid sequence
FLYFVIYFFLTNECLTVIYNIIYIIDFVCFFFXGPGKKKLKKX*nlxex


Translated Amino Acid sequence (All Frames)
Frame A:
ififcylffpnqrvsnryl*yyiyn*fclffffxagkkkikkkxkfxgk


Frame B:
FLYFVIYFFLTNECLTVIYNIIYIIDFVCFFFXGPGKKKLKKX*nlxex


Frame C:
fyillfifs*ptsv*plfiilyi*lilfvfffxgrekkn*kkxkixgkx


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15498-1 (Contig-U15498-1Q)
/CSM_Contig/Contig-U15498-1Q.Seq.d
(149 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15498-1 (Contig-U15498-1Q) /CSM_Contig/Conti... 119 1e-27
Contig-U11121-1 (Contig-U11121-1Q) /CSM_Contig/Conti... 36 0.014
Contig-U10603-1 (Contig-U10603-1Q) /CSM_Contig/Conti... 36 0.014
Contig-U05770-1 (Contig-U05770-1Q) /CSM_Contig/Conti... 36 0.014
Contig-U05055-1 (Contig-U05055-1Q) /CSM_Contig/Conti... 36 0.014
Contig-U14828-1 (Contig-U14828-1Q) /CSM_Contig/Conti... 34 0.054
Contig-U13410-1 (Contig-U13410-1Q) /CSM_Contig/Conti... 34 0.054
Contig-U10182-1 (Contig-U10182-1Q) /CSM_Contig/Conti... 34 0.054
Contig-U07966-1 (Contig-U07966-1Q) /CSM_Contig/Conti... 34 0.054
Contig-U16035-1 (Contig-U16035-1Q) /CSM_Contig/Conti... 32 0.21

>Contig-U15498-1 (Contig-U15498-1Q) /CSM_Contig/Contig-U15498-1Q.Seq.d
Length = 149

Score = 119 bits (60), Expect = 1e-27
Identities = 60/60 (100%)
Strand = Plus / Plus


Query: 28 cctaaccaacgagtgtctaaccgttatttataatattatatatataattgattttgtttg 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 cctaaccaacgagtgtctaaccgttatttataatattatatatataattgattttgtttg 87


Score = 28.2 bits (14), Expect = 3.3
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 62 attatatatataat 75
||||||||||||||
Sbjct: 75 attatatatataat 62


>Contig-U11121-1 (Contig-U11121-1Q) /CSM_Contig/Contig-U11121-1Q.Seq.d
Length = 1846

Score = 36.2 bits (18), Expect = 0.014
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 57 ataatattatatatataa 74
||||||||||||||||||
Sbjct: 107 ataatattatatatataa 90


>Contig-U10603-1 (Contig-U10603-1Q) /CSM_Contig/Contig-U10603-1Q.Seq.d
Length = 144

Score = 36.2 bits (18), Expect = 0.014
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 50 gttatttataatattata 67
||||||||||||||||||
Sbjct: 54 gttatttataatattata 37


Score = 28.2 bits (14), Expect = 3.3
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 54 tttataatattata 67
||||||||||||||
Sbjct: 35 tttataatattata 48


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3151
Number of Sequences: 8402
Number of extensions: 3151
Number of successful extensions: 1064
Number of sequences better than 10.0: 171
length of query: 149
length of database: 8,075,542
effective HSP length: 15
effective length of query: 134
effective length of database: 7,949,512
effective search space: 1065234608
effective search space used: 1065234608
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 1.29
Homology vs DNA
Query= Contig-U15498-1 (Contig-U15498-1Q) /CSM_Contig/Contig-U15498-1Q.Seq.d
(149 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AY387646) Dictyostelium discoideum Phg1B (phg1b) gene, comp... 119 3e-23 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 119 3e-23 1
(BJ427396) Dictyostelium discoideum cDNA clone:ddv62e12, 5' ... 119 3e-23 1
(BJ329698) Dictyostelium discoideum cDNA clone:dda25p21, 5' ... 113 2e-21 1
(X95276) Plasmodium falciparum complete gene map of plastid-... 52 0.005 1
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge... 52 0.005 1
(AC187965) Canis Familiaris, clone XX-97G9, complete sequence. 42 0.014 2
(CE635784) tigr-gss-dog-17000366748820 Dog Library Canis lup... 42 0.018 2
(EI710209) IGBR11P21TR BAC library from the recurrent gliobl... 50 0.021 1
(DE353653) Bombyx mori genomic DNA, BAC clone:BET_073_P11. 38 0.065 2
(CJ453226) Macaca fascicularis mRNA, clone: QflA-18917, 5' e... 40 0.065 2
(CT573111) Zebrafish DNA sequence from clone CH211-233A24 in... 48 0.083 1
(BX537143) Zebrafish DNA sequence from clone CH211-86H15 in ... 48 0.083 1
(AC116997) Mus musculus BAC clone RP23-8J15 from chromosome ... 48 0.083 1
(AC198660) Pan troglodytes BAC clone CH251-713G12 from chrom... 48 0.083 1
(AC146054) Pan troglodytes BAC clone RP43-78A13 from chromos... 48 0.083 1
(DI014697) Transgenic non-human animals for pharmacological ... 48 0.083 1
(DD156901) Means and methods for improved treatment of cance... 48 0.083 1
(DD156349) Means and methods for improved treatment of cance... 48 0.083 1
(DD144761) Means and methods for improved treatment of cance... 48 0.083 1
(DD142692) Means and methods for improved treatment of cance... 48 0.083 1
(DD134590) Means and methods for improved treatment of cance... 48 0.083 1
(DD097953) Transgenic non-human animals for pharmacological ... 48 0.083 1
(CS790008) Sequence 1264 from Patent WO2005031001. 48 0.083 1
(CS623065) Sequence 683 from Patent WO2003013537. 48 0.083 1
(BD452705) Diagnosis of Diseases Associated with tumor suppr... 48 0.083 1
(BD452704) Diagnosis of Diseases Associated with tumor suppr... 48 0.083 1
(BD428940) Method and nucleic acids for pharmacogenomic meth... 48 0.083 1
(BD428939) Method and nucleic acids for pharmacogenomic meth... 48 0.083 1
(AX707915) Sequence 683 from Patent WO03013536. 48 0.083 1
(AX706985) Sequence 683 from Patent WO03013534. 48 0.083 1
(AX348419) Sequence 114 from Patent WO0202806. 48 0.083 1
(AX348418) Sequence 113 from Patent WO0202806. 48 0.083 1
(AX346375) Sequence 1446 from Patent WO0200928. 48 0.083 1
(AX346374) Sequence 1445 from Patent WO0200928. 48 0.083 1
(AX251184) Sequence 152 from Patent WO0168912. 48 0.083 1
(AX251183) Sequence 151 from Patent WO0168912. 48 0.083 1
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 48 0.083 1
(AC002457) Homo sapiens BAC clone CTB-60P12 from 7, complete... 48 0.083 1
(AC152202) Bos taurus clone CH240-3E22, WORKING DRAFT SEQUEN... 48 0.083 1
(AC084136) Homo sapiens clone RP13-506N4, WORKING DRAFT SEQU... 48 0.083 1
(CU469573) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.083 1
(CR931790) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.083 1
(CR456622) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.083 1
(AC223790) Bos taurus clone CH240-458A7, WORKING DRAFT SEQUE... 48 0.083 1
(AQ896844) HS_3184_A2_B08_MR CIT Approved Human Genomic Sper... 48 0.083 1
(BU495218) PfESToab85h09.y1 Plasmodium falciparum 3D7 asexua... 48 0.083 1
(AL590148) Zebrafish DNA sequence from clone RP71-30I22 in l... 40 0.094 2
(AC172501) Bos taurus clone CH240-185H15, WORKING DRAFT SEQU... 40 0.14 2
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 0.19 2
(AC093142) Homo sapiens chromosome 3 clone RP11-301D8, compl... 34 0.19 2
(CJ453407) Macaca fascicularis mRNA, clone: QflA-19106, 5' e... 38 0.24 2
(CR293514) Zebrafish DNA sequence from clone CH211-153C2 in ... 46 0.33 1
(BX927308) Zebrafish DNA sequence from clone DKEY-16M19 in l... 46 0.33 1
(BX119973) Zebrafish DNA sequence from clone RP71-77D7 in li... 46 0.33 1
(AC157211) Mus musculus chromosome 1, clone RP23-204C6, comp... 46 0.33 1
(AM478905) Vitis vinifera contig VV78X027201.36, whole genom... 46 0.33 1
(AM452655) Vitis vinifera contig VV78X019388.8, whole genome... 46 0.33 1
(EF650190) Dasypogon diadema 28S ribosomal RNA gene, partial... 46 0.33 1
(AY325057) Saropogon fletcheri 28S ribosomal RNA gene, parti... 46 0.33 1
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 46 0.33 1
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 46 0.33 1
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 46 0.33 1
(AC079349) Homo sapiens BAC clone RP11-436A7 from 4, complet... 46 0.33 1
(AC126859) Rattus norvegicus clone CH230-41M20, *** SEQUENCI... 46 0.33 1
(FP015923) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.33 1
(CU861466) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.33 1
(CU424467) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.33 1
(CU326341) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.33 1
(AL844509) Plasmodium falciparum chromosome 13. 46 0.33 1
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 46 0.33 1
(AC212933) Equus caballus clone CH241-270I9, WORKING DRAFT S... 46 0.33 1
(AC199305) Spermophilus tridecemlineatus clone VMRC20-714L12... 46 0.33 1
(BH349283) CH230-32L19.TJ CHORI-230 Segment 1 Rattus norvegi... 46 0.33 1
(FI267788) CccaBb051-B9JR CccABb Cajanus cajan genomic clone... 46 0.33 1
(CZ888284) ubnb001e005h03f0 Brassica napus methylation unfil... 46 0.33 1
(EH014536) USDA-FP_187227 Lysiphlebus testaceipes adult whol... 46 0.33 1
(EG121089) MSAM211209_0693_1605 LCM-dissected maize inbred l... 46 0.33 1
(EV422554) 210805750 NGP Nasonia giraulti cDNA clone 157M7 5... 46 0.33 1
(CR388128) Zebrafish DNA sequence from clone CH211-127B17 in... 38 0.43 2
(AC213114) Gallus gallus BAC clone CH261-105D18 from chromos... 42 0.55 2
(AX346433) Sequence 1504 from Patent WO0200928. 36 0.58 2
(ER938149) AF__Bb0019N03r AF__Bb Aquilegia formosa genomic, ... 42 0.90 2
(Z98551) Plasmodium falciparum MAL3P6. 40 0.94 3
(FF297643) 279318963 Pea aphid whole body normalized full le... 36 1.00 2
(CG422931) ZMMBBc0039I05f ZMMBBc (EcoRI) Zea mays subsp. may... 38 1.2 2
(CU459210) Zebrafish DNA sequence from clone CH73-127M5 in l... 44 1.3 1
(CR759788) Zebrafish DNA sequence from clone CH211-153F13. 44 1.3 1
(CR626910) Zebrafish DNA sequence from clone DKEY-204E20 in ... 44 1.3 1
(BX511081) Zebrafish DNA sequence from clone DKEY-6B12 in li... 44 1.3 1
(BX470181) Zebrafish DNA sequence from clone CH211-91P22 in ... 44 1.3 1
(BV554960) S217P60457FG8.T0 Noemie Pan troglodytes troglodyt... 44 1.3 1
(BV549534) S215P61409FE7.T0 Clara Pan troglodytes troglodyte... 44 1.3 1
(BV532820) G591P619899RC8.T0 Clint Pan troglodytes verus STS... 44 1.3 1
(BV384459) S244P6287FE7.T0 AlaskaGrayWolf Canis lupus STS ge... 44 1.3 1
(BV264170) S235P6150RA7.T0 ItalianGreyhound Canis familiaris... 44 1.3 1
(AC133495) Mus musculus BAC clone RP24-331G15 from chromosom... 44 1.3 1
(AC125359) Mus musculus BAC clone RP23-102I17 from chromosom... 44 1.3 1
(AC027654) Mus musculus strain C57BL6/J chromosome 6 clone R... 44 1.3 1
(BS000052) Pan troglodytes chromosome 22 clone:RP43-049N07, ... 44 1.3 1
(AC197450) MACACA MULATTA BAC clone CH250-450L6 from chromos... 44 1.3 1
(AM451628) Vitis vinifera contig VV78X042695.3, whole genome... 44 1.3 1
(AC171533) Medicago truncatula chromosome 7 BAC clone mth2-8... 44 1.3 1
(AJ427478) Sus scrofa ASIP gene for agouti signalling protei... 44 1.3 1
(EU106657) Cochliomyia macellaria clone 15 12S ribosomal RNA... 44 1.3 1
(EU106656) Cochliomyia macellaria clone 5 12S ribosomal RNA ... 44 1.3 1
(EU106655) Cochliomyia macellaria clone 4 12S ribosomal RNA ... 44 1.3 1
(EU106654) Cochliomyia macellaria clone 2 12S ribosomal RNA ... 44 1.3 1
(EU106653) Cochliomyia macellaria clone 1 12S ribosomal RNA ... 44 1.3 1
(EU106652) Cochliomyia macellaria clone 4 12S ribosomal RNA ... 44 1.3 1
(AY568009) Apis mellifera ADP/ATP translocase gene, complete... 44 1.3 1
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 44 1.3 1
(AL031745) Plasmodium falciparum DNA from MAL1P2. 44 1.3 1
(AF151385) Cochliomyia macellaria tRNA-Ile gene, partial seq... 44 1.3 1
(AF151384) Cochliomyia macellaria tRNA-Ile gene, partial seq... 44 1.3 1
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 44 1.3 1
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 44 1.3 1
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 44 1.3 1
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 44 1.3 1
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 44 1.3 1
(AP001676) Homo sapiens genomic DNA, chromosome 21q, section... 44 1.3 1
(AP000403) Homo sapiens genomic DNA, chromosome 21q21.2, LL5... 44 1.3 1
(AL136527) Human DNA sequence from clone RP11-215B13 on chro... 44 1.3 1
(AC097513) Homo sapiens BAC clone RP11-419E3 from 4, complet... 44 1.3 1
(AC162546) Bos taurus clone CH240-122I19, WORKING DRAFT SEQU... 44 1.3 1
(AC160195) Bos taurus clone CH240-83O24, WORKING DRAFT SEQUE... 44 1.3 1
(AC155070) Bos taurus clone CH240-18M20, *** SEQUENCING IN P... 44 1.3 1
(AC152681) Bos taurus clone CH240-10O23, WORKING DRAFT SEQUE... 44 1.3 1
(AC137661) Gallus gallus clone TAM33-80P12, WORKING DRAFT SE... 44 1.3 1
(AC128452) Rattus norvegicus clone CH230-92F20, *** SEQUENCI... 44 1.3 1
(AC121475) Rattus norvegicus clone CH230-114I20, *** SEQUENC... 44 1.3 1
(AC114450) Rattus norvegicus clone CH230-126H22, WORKING DRA... 44 1.3 1
(AC111933) Rattus norvegicus clone CH230-155D1, WORKING DRAF... 44 1.3 1
(AC111467) Rattus norvegicus clone CH230-76N16, *** SEQUENCI... 44 1.3 1
(AC096826) Rattus norvegicus clone CH230-141B15, WORKING DRA... 44 1.3 1
(CU929130) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.3 1
(CU855967) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.3 1
(CU469416) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.3 1
(CU467827) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.3 1
(CU062616) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.3 1
(CU062552) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.3 1
(BX897742) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.3 1
(AL844506) Plasmodium falciparum chromosome 7. 44 1.3 1
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 44 1.3 1
(AC212524) Equus caballus clone CH241-94I9, WORKING DRAFT SE... 44 1.3 1
(AC205083) Macaca mulatta chromosome 10 clone CH250-196M6, W... 44 1.3 1
(AC181775) Strongylocentrotus purpuratus clone R3-1034B05, W... 44 1.3 1
(AC018379) Homo sapiens clone RP11-4K24, WORKING DRAFT SEQUE... 44 1.3 1
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 44 1.3 1
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49... 44 1.3 1
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI... 44 1.3 1
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 44 1.3 1
(BH561948) BOHFH53TF BOHF Brassica oleracea genomic clone BO... 44 1.3 1
(BH071999) RPCI-24-331G15.TJB RPCI-24 Mus musculus genomic c... 44 1.3 1
(FH985326) CHO_OF6839xi06r1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 1.3 1
(FH796625) OSB_1180001xi14r1.ab1 OSB_1180 Nicotiana tabacum ... 44 1.3 1
(EK527367) 1095515647494 Global-Ocean-Sampling_GS-32-01-01-1... 44 1.3 1
(EK411983) 1095505200829 Global-Ocean-Sampling_GS-31-01-01-1... 44 1.3 1
(DE559343) Bombyx mori genomic DNA, Fosmid clone:GBMFno199_b... 44 1.3 1
(DE156859) Bombyx mori genomic DNA, Fosmid clone:RO0300-B22_R. 44 1.3 1
(CZ976230) 178084 Tomato MboI BAC Library Solanum lycopersic... 44 1.3 1
(CZ540955) SRAA-aad35c04.g1 Strongyloides ratti whole genome... 44 1.3 1
(CZ413619) 1009322 RP42 Bos taurus genomic clone RP42-173O18... 44 1.3 1
(CR350153) mte1-85C15FM1 BAC end, cultivar Jemalong A17 of M... 44 1.3 1
(CR330673) mte1-6F7RM1 BAC end, cultivar Jemalong A17 of Med... 44 1.3 1
(CR325938) mte1-53N18FM1 BAC end, cultivar Jemalong A17 of M... 44 1.3 1
(CR243586) Reverse strand read from insert in 5'HPRT inserti... 44 1.3 1
(BZ060302) lkz66a06.b1 B.oleracea002 Brassica oleracea genom... 44 1.3 1
(BZ031566) oef85c08.g1 B.oleracea002 Brassica oleracea genom... 44 1.3 1
(BZ006372) oef78a02.b1 B.oleracea002 Brassica oleracea genom... 44 1.3 1
(BH997422) oef97f06.b1 B.oleracea002 Brassica oleracea genom... 44 1.3 1
(BH995737) oeg68e07.b1 B.oleracea002 Brassica oleracea genom... 44 1.3 1
(BH698109) BOMED22TF BO_2_3_KB Brassica oleracea genomic clo... 44 1.3 1
(BH663744) BOMCT66TR BO_2_3_KB Brassica oleracea genomic clo... 44 1.3 1
(BH645418) BOHVF04TR BO_2_3_KB Brassica oleracea genomic clo... 44 1.3 1
(AG305167) Mus musculus molossinus DNA, clone:MSMg01-085K09.... 44 1.3 1
(EB472051) AGENCOURT_73529405 NICHD_XGC_sple_PHA Xenopus lae... 44 1.3 1
(DT468032) GH_CHX21E19.r GH_CHX Gossypium hirsutum cDNA clon... 44 1.3 1
(DT468031) GH_CHX21E19.f GH_CHX Gossypium hirsutum cDNA clon... 44 1.3 1
(DT050493) COT_EA_A05 Fiber and Ovule of Xu-142 Lambda Zap E... 44 1.3 1
(DT040665) Mdrtp1009G23.g1 Apple_EST_Mdrtp Malus x domestica... 44 1.3 1
(DR424429) naw06h10.y1 Chicken eye (hatched). Unnormalized (... 44 1.3 1
(DN801208) G.hir-15-20 DAA bolls drought stressed 363 15-20 ... 44 1.3 1
(DN409807) LIB4007-023-Q1-K1-F10 LIB4007 Canis lupus familia... 44 1.3 1
(DC230804) Plasmodium berghei strain ANKA cDNA clone:SG01983... 44 1.3 1
(DB773145) Apis mellifera head cDNA, RIKEN full-length enric... 44 1.3 1
(DB769927) Apis mellifera head cDNA, RIKEN full-length enric... 44 1.3 1
(CV838726) ID0ACC8DB09RM1 ID0ACC Acyrthosiphon pisum cDNA cl... 44 1.3 1
(CV835595) ID0ACC28DE12RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1.3 1
(CN238047) RJA120G04.ab1 RJbrain Gallus gallus cDNA 5', mRNA... 44 1.3 1
(AJ925658) Theileria annulata EST, clone tam007e12_p1k. 44 1.3 1
(BE053008) GA__Ea0033H20f Gossypium arboreum 7-10 dpa fiber ... 44 1.3 1
(FE661429) UAHAUST_04B_F_E08 UaHaust_ARS Uromyces appendicul... 44 1.3 1
(ES808585) UFL_193_31 Cotton fiber 0-10 day post anthesis Go... 44 1.3 1
(ES795398) UFL_533_46 Cotton fiber 0-10 day post anthesis Go... 44 1.3 1
(FF480013) G613P6221RA4.T0 Acorn worm blastula/gastrula pCMV... 40 1.6 2
(FF650130) G826P5234FC1.T0 Acorn worm normalized juvenile pE... 40 1.8 2
(AC231734) Medicago truncatula chromosome 2 clone mte1-36f3,... 36 2.1 2
(CG138077) PUIMU58TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 38 2.2 2
(ET911903) CHO_OF333xl05r1.ab1 CHO_OF Nicotiana tabacum geno... 34 2.3 2
(BZ977386) PUGIZ03TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 38 2.3 2
(ET911825) CHO_OF333xl05f1.ab1 CHO_OF Nicotiana tabacum geno... 34 2.3 2
(AC017063) Homo sapiens BAC clone RP11-354H17 from 4, comple... 34 2.5 2
(AC069429) Homo sapiens chromosome 3 clone RP11-553E4, WORKI... 34 2.6 2
(AC145202) Medicago truncatula clone mth2-15e9, complete seq... 38 3.1 2
(AM460501) Vitis vinifera contig VV78X210151.7, whole genome... 32 3.2 2
(CC297599) CH261-34N19_Sp6.1 CH261 Gallus gallus genomic clo... 34 3.3 2
(EK412688) 1095505209751 Global-Ocean-Sampling_GS-31-01-01-1... 32 3.4 2
(AG631960) Macaca fuscata fuscata DNA, clone: MSB2-033G13_R,... 34 3.4 2
(AG714943) Macaca fuscata fuscata DNA, clone: MSB2-162L06_R,... 34 3.4 2
(BH943188) odd65h09.b1 B.oleracea002 Brassica oleracea genom... 32 3.4 2
(CE261571) tigr-gss-dog-17000346574970 Dog Library Canis lup... 32 3.4 2
(DV746013) ID0AAG4CA03CM1 ID0AAG Acyrthosiphon pisum cDNA cl... 34 3.5 2
(BZ391226) EINBG08TF EI_10_12_KB Entamoeba invadens genomic ... 32 3.5 2
(CT025838) Medicago truncatula chromosome 5 clone mth2-124f1... 36 3.8 2
(AC011050) Homo sapiens clone RP11-9P22, WORKING DRAFT SEQUE... 36 4.5 2
(AC146571) Medicago truncatula clone mth2-104a2, complete se... 40 4.6 2
(CU138531) Zebrafish DNA sequence from clone CH211-151L1 in ... 42 5.1 1
(CR936977) Zebrafish DNA sequence from clone CH211-24O8 in l... 42 5.1 1
(CR932077) Zebrafish DNA sequence from clone DKEY-33K1 in li... 42 5.1 1
(CR848667) Zebrafish DNA sequence from clone CH211-257P13 in... 42 5.1 1
(CR812832) Zebrafish DNA sequence from clone CH211-136K14 in... 42 5.1 1
(CR749176) Zebrafish DNA sequence from clone DKEY-43B13 in l... 42 5.1 1
(CR450764) Zebrafish DNA sequence from clone CH211-209F22 in... 42 5.1 1
(CR381544) Zebrafish DNA sequence from clone CH211-231H20. 42 5.1 1
(CR376848) Zebrafish DNA sequence from clone CH211-197K23 in... 42 5.1 1
(CR376771) Zebrafish DNA sequence from clone DKEY-160I7 in l... 42 5.1 1
(CR352308) Zebrafish DNA sequence from clone CH211-195H3 in ... 42 5.1 1
(BX914214) Zebrafish DNA sequence from clone DKEY-9I5 in lin... 42 5.1 1
(BX663515) Zebrafish DNA sequence from clone DKEY-228G21 in ... 42 5.1 1
(BX649245) Zebrafish DNA sequence from clone CH211-213C4 in ... 42 5.1 1
(BX571968) Zebrafish DNA sequence from clone DKEY-27C4 in li... 42 5.1 1
(BX511094) Zebrafish DNA sequence from clone CH211-137G12 in... 42 5.1 1
(BX296537) Zebrafish DNA sequence from clone CH211-249G3 in ... 42 5.1 1
(AL929229) Zebrafish DNA sequence from clone CH211-1E14 in l... 42 5.1 1
(AL928725) Zebrafish DNA sequence from clone CH211-13O20 in ... 42 5.1 1
(AL844514) Zebrafish DNA sequence from clone DKEY-7E20 in li... 42 5.1 1
(AC196083) Gallus gallus BAC clone CH261-147E14 from chromos... 42 5.1 1
(AC188446) Gallus gallus BAC clone CH261-122M13 from chromos... 42 5.1 1
(AC145912) Gallus gallus BAC clone CH261-48P17 from chromoso... 42 5.1 1
(M18027) Synthetic Gossypium hirsutum (cotton) alpha globuli... 42 5.1 1
(BV642671) S215P60119RF11.T0 Clara Pan troglodytes troglodyt... 42 5.1 1
(BX901941) Mouse DNA sequence from clone RP23-344H22 on chro... 42 5.1 1
(BX842239) Mouse DNA sequence from clone RP23-454A1 on chrom... 42 5.1 1
(BX530025) Mouse DNA sequence from clone RP23-14E18 on chrom... 42 5.1 1
(AL929064) Mouse DNA sequence from clone RP23-442A7 on chrom... 42 5.1 1
(AL808134) Mouse DNA sequence from clone RP23-135E1 on chrom... 42 5.1 1
(AC166986) Mus musculus chromosome 1, clone RP24-184H22, com... 42 5.1 1
(AC166985) Mus musculus chromosome 1, clone RP23-14I20, comp... 42 5.1 1
(AC162291) Mus musculus chromosome 18, clone RP23-264B14, co... 42 5.1 1
(AC159331) Mus musculus 10 BAC RP23-218E2 (Roswell Park Canc... 42 5.1 1
(AC154341) Mus musculus BAC clone RP23-240C2 from 16, comple... 42 5.1 1
(AC150747) Mus musculus BAC clone RP23-249E15 from 5, comple... 42 5.1 1
(AC123032) Mus musculus BAC clone RP24-480K24 from chromosom... 42 5.1 1
(AC121780) Mus musculus BAC clone RP23-360J14 from chromosom... 42 5.1 1
(AC118231) Mus musculus chromosome 5, clone RP23-462J24, com... 42 5.1 1
(AC118224) Mus musculus chromosome 10, clone RP23-341N20, co... 42 5.1 1
(AC117590) Mus musculus chromosome 3, clone RP23-225F12, com... 42 5.1 1
(AC211619) Macaca mulatta BAC CH250-194M5 (Children's Hospi... 42 5.1 1
(AC194669) Pan troglodytes BAC clone CH251-257C18 from chrom... 42 5.1 1
(AC169819) Rhesus Macaque BAC CH250-132C22 (Children's Hosp... 42 5.1 1
(DQ424856) Vitis vinifera cultivar Maxxa chloroplast, comple... 42 5.1 1
(CR936326) Medicago truncatula chromosome 5 clone mte1-25j21... 42 5.1 1
(AP009282) Solanum lycopersicum genomic DNA, chromosome 8, c... 42 5.1 1
(AM698041) Vanderwaltozyma polyspora partial mitochondrial g... 42 5.1 1
(AM465516) Vitis vinifera contig VV78X130101.4, whole genome... 42 5.1 1
(AM456611) Vitis vinifera contig VV78X131343.5, whole genome... 42 5.1 1
(AM450642) Vitis vinifera, whole genome shotgun sequence, co... 42 5.1 1
(AM439171) Vitis vinifera contig VV78X060008.15, whole genom... 42 5.1 1
(AM438809) Vitis vinifera contig VV78X199331.3, whole genome... 42 5.1 1
(AM430590) Vitis vinifera contig VV78X234759.34, whole genom... 42 5.1 1
(AC232577) Brassica rapa subsp. pekinensis clone KBrS012H21,... 42 5.1 1
(AC208139) Populus trichocarpa clone JGIACSB13-D20, complete... 42 5.1 1
(AC174378) Medicago truncatula chromosome 8 clone mth2-57m5,... 42 5.1 1
(AC150647) Medicago truncatula chromosome 8 clone mth2-65p21... 42 5.1 1
(AC149574) Medicago truncatula chromosome 8 clone mth2-129k1... 42 5.1 1
(AC148815) Medicago truncatula chromosome 2 clone mth2-13k15... 42 5.1 1
(AC084807) Arabidopsis thaliana chromosome 1 BAC T18F15 geno... 42 5.1 1
(EA338006) Sequence 10498 from patent US 7306913. 42 5.1 1
(EA338004) Sequence 10496 from patent US 7306913. 42 5.1 1
(EA338002) Sequence 10494 from patent US 7306913. 42 5.1 1
(EA333137) Sequence 5629 from patent US 7306913. 42 5.1 1
(DJ051015) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 42 5.1 1
(DI106499) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 42 5.1 1
(CS789193) Sequence 449 from Patent WO2005031001. 42 5.1 1
(CS083873) Sequence 56 from Patent WO2005040377. 42 5.1 1
(CQ494935) Sequence 26802 from Patent WO0160860. 42 5.1 1
(CQ489089) Sequence 20956 from Patent WO0160860. 42 5.1 1
(AX405942) Sequence 357 from Patent WO0222660. 42 5.1 1
(CU407300) Pig DNA sequence from clone CH242-60G15 on chromo... 42 5.1 1
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 42 5.1 1
(AP009038) Bombyx mori genomic DNA, chromosome 12, BAC clone... 42 5.1 1
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 42 5.1 1
(AL034557) Plasmodium falciparum MAL4P1. 42 5.1 1
(AF077546) Caenorhabditis elegans cosmid T08E11, complete se... 42 5.1 1
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 42 5.1 1
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 42 5.1 1
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 42 5.1 1
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 42 5.1 1
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 42 5.1 1
(AE001427) Plasmodium falciparum 3D7 chromosome 2 section 64... 42 5.1 1
(EF444970) Homo sapiens cubilin precursor (CUBN) gene, compl... 42 5.1 1
(AP006442) Homo sapiens genomic DNA, chromosome 11 clone:CMB... 42 5.1 1
(AP006252) Homo sapiens genomic DNA, chromosome 8, clone:RP1... 42 5.1 1
(AP006244) Homo sapiens genomic DNA, chromosome 8, clone:RP1... 42 5.1 1
(AP006222) Homo sapiens genomic DNA, chromosome Un, clone:CM... 42 5.1 1
(AL512286) Human DNA sequence from clone RP11-45J1 on chromo... 42 5.1 1
(AL445523) Human DNA sequence from clone RP11-231N9 on chrom... 42 5.1 1
(AL391834) Human DNA sequence from clone RP11-513M16 on chro... 42 5.1 1
(AL391277) Human DNA sequence from clone RP11-357C3 on chrom... 42 5.1 1
(AL358013) Human DNA sequence from clone RP11-420G9 on chrom... 42 5.1 1
(AL356585) Human DNA sequence from clone RP11-341D18 on chro... 42 5.1 1
(AL354879) Human DNA sequence from clone RP11-4E23 on chromo... 42 5.1 1
(AL354797) Human DNA sequence from clone RP11-115J22 on chro... 42 5.1 1
(AL157838) Human DNA sequence from clone RP4-724E16 on chrom... 42 5.1 1
(AL137021) Human DNA sequence from clone RP11-202A15 on chro... 42 5.1 1
(AF312915) Homo sapiens chromosome 20 clones 97 and 127, com... 42 5.1 1
(AC140059) Homo sapiens 3 BAC RP11-118N24 (Roswell Park Canc... 42 5.1 1
(AC134919) Homo sapiens BAC clone RP13-485B10 from 4, comple... 42 5.1 1
(AC124290) Homo sapiens chromosome 8, clone RP11-89M20, comp... 42 5.1 1
(AC113617) Homo sapiens BAC clone RP11-610B19 from 4, comple... 42 5.1 1
(AC112510) Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cance... 42 5.1 1
(AC112487) Homo sapiens 3 BAC RP11-90K6 (Roswell Park Cancer... 42 5.1 1
(AC107399) Homo sapiens BAC clone RP11-755N14 from 4, comple... 42 5.1 1
(AC107390) Homo sapiens BAC clone RP11-534O19 from 4, comple... 42 5.1 1
(AC105357) Homo sapiens chromosome 11, clone RP11-321F11, co... 42 5.1 1
(AC105243) Homo sapiens chromosome 18, clone CTD-2354A18, co... 42 5.1 1
(AC098799) Homo sapiens BAC clone RP11-642E20 from 4, comple... 42 5.1 1
(AC093845) Homo sapiens BAC clone RP11-454M3 from 4, complet... 42 5.1 1
(AC092881) Homo sapiens 12 BAC RP11-398J13 (Roswell Park Can... 42 5.1 1
(AC091013) Homo sapiens chromosome 11, clone RP11-379P15, co... 42 5.1 1
(AC090614) Homo sapiens chromosome 17, clone RP11-577I13, co... 42 5.1 1
(AC079062) Homo sapiens chromosome 18, clone RP11-476I17, co... 42 5.1 1
(AC073409) Homo sapiens BAC clone RP11-17O9 from 2, complete... 42 5.1 1
(AC068787) Homo sapiens 12 BAC RP11-483I24 (Roswell Park Can... 42 5.1 1
(AC067747) Homo sapiens chromosome 10 clone RP11-406H21, com... 42 5.1 1
(AC025540) Homo sapiens BAC clone RP11-295N22 from 7, comple... 42 5.1 1
(AC005341) Homo sapiens chromosome , clone RP11-146P2, compl... 42 5.1 1
(AC004617) Homo sapiens chromosome Y, clone XX-264M20, compl... 42 5.1 1
(AC002368) Homo sapiens Xq28 BAC PAC and cosmid clones conta... 42 5.1 1
(AC161255) Mus musculus chromosome 16 clone RP24-96C10, WORK... 42 5.1 1
(AC160578) Bos taurus clone CH240-84A20, WORKING DRAFT SEQUE... 42 5.1 1
(AC157859) Papio anubis clone RP41-412M2, WORKING DRAFT SEQU... 42 5.1 1
(AC156849) Bos taurus clone CH240-60G5, WORKING DRAFT SEQUEN... 42 5.1 1
(AC152372) Dasypus novemcinctus clone VMRC5-224M18, WORKING ... 42 5.1 1
(AC152126) Dasypus novemcinctus clone VMRC5-122P15, WORKING ... 42 5.1 1
(AC150233) Papio anubis clone RP41-326E7, WORKING DRAFT SEQU... 42 5.1 1
(AC149861) Papio anubis clone RP41-417J22, WORKING DRAFT SEQ... 42 5.1 1
(AC141679) Apis mellifera clone CH224-55I23, *** SEQUENCING ... 42 5.1 1
(AC139864) Mus musculus chromosome 16 clone RP23-366A14 map ... 42 5.1 1
(AC135714) Rattus norvegicus clone CH230-3B18, WORKING DRAFT... 42 5.1 1
(AC135574) Rattus norvegicus clone CH230-240D19, *** SEQUENC... 42 5.1 1
(AC132523) Rattus norvegicus clone CH230-440A17, WORKING DRA... 42 5.1 1
(AC131515) Rattus norvegicus clone CH230-1P5, *** SEQUENCING... 42 5.1 1
(AC128435) Rattus norvegicus clone CH230-151A22, *** SEQUENC... 42 5.1 1
(AC126300) Rattus norvegicus clone CH230-104J24, *** SEQUENC... 42 5.1 1
(AC122793) Mus musculus clone RP24-292J21, WORKING DRAFT SEQ... 42 5.1 1
(AC119065) Canis lupus familiaris clone RP81-108H20, WORKING... 42 5.1 1
(AC118766) Rattus norvegicus clone CH230-158F16, *** SEQUENC... 42 5.1 1
(AC118297) Rattus norvegicus clone CH230-24E4, WORKING DRAFT... 42 5.1 1
(AC114514) Rattus norvegicus clone CH230-63A18, WORKING DRAF... 42 5.1 1
(AC109451) Homo sapiens chromosome 5 clone RP11-170C8, WORKI... 42 5.1 1
(AC108723) Homo sapiens chromosome 12 clone RP11-301A17, WOR... 42 5.1 1
(AC107535) Rattus norvegicus clone CH230-211A22, *** SEQUENC... 42 5.1 1
(AC106111) Rattus norvegicus clone CH230-140K16, *** SEQUENC... 42 5.1 1
(AC105712) Rattus norvegicus clone CH230-138E4, *** SEQUENCI... 42 5.1 1
(AC103087) Rattus norvegicus clone CH230-102P17, *** SEQUENC... 42 5.1 1
(AC097395) Rattus norvegicus clone CH230-10B2, *** SEQUENCIN... 42 5.1 1
(AC097311) Rattus norvegicus clone CH230-191E1, WORKING DRAF... 42 5.1 1
(CU984549) Brassica rapa subsp. pekinensis clone KBrB040I06,... 42 5.1 1
(CU861503) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 5.1 1
(CU856602) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 5.1 1
(CU695194) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 5.1 1
(AC092975) Homo sapiens chromosome 3q clone RP11-90F21, WORK... 42 5.1 1
(AC074005) Homo sapiens chromosome 11 clone RP11-297I1, WORK... 42 5.1 1
(AC068958) Homo sapiens chromosome 3 clone RP11-90K6 map 3, ... 42 5.1 1
(AC027292) Homo sapiens chromosome 12 clone RP11-327B18, WOR... 42 5.1 1
(AC026873) Homo sapiens chromosome 17 clone RP11-577I13, WOR... 42 5.1 1
(CU570729) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 5.1 1
(CT961046) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 5.1 1
(CT954247) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 5.1 1
(CR854853) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 42 5.1 1
(CR678384) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 5.1 1
(AP001833) Homo sapiens genomic DNA, chromosome 11q clone:RP... 42 5.1 1
(AL844507) Plasmodium falciparum chromosome 8. 42 5.1 1
(AL591666) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 5.1 1
(AC232744) Monodelphis domestica clone VMRC18-148D24, WORKIN... 42 5.1 1
(AC231528) Zea mays chromosome 9 clone CH201-232P12; ZMMBBc0... 42 5.1 1
(AC230327) Bos taurus clone CH240-512L21, WORKING DRAFT SEQU... 42 5.1 1
(AC223633) Bos taurus clone CH240-463E8, WORKING DRAFT SEQUE... 42 5.1 1
(AC222363) Bos taurus clone CH240-416C7, WORKING DRAFT SEQUE... 42 5.1 1
(AC220013) Bos taurus clone CH240-316C20, WORKING DRAFT SEQU... 42 5.1 1
(AC219805) Bos taurus clone CH240-321C2, WORKING DRAFT SEQUE... 42 5.1 1
(AC212590) Pongo abelii chromosome UNKNOWN clone CH276-109M9... 42 5.1 1
(AC195044) Colobus guereza clone CH272-93I3, WORKING DRAFT S... 42 5.1 1
(AC193211) Pan troglodytes chromosome 1 clone CH251-646O21, ... 42 5.1 1
(AC167532) Mus musculus chromosome 5 clone RP23-206A13 map 5... 42 5.1 1
(AC023584) Homo sapiens chromosome 12 clone RP11-301A17 map ... 42 5.1 1
(AC020628) Homo sapiens chromosome 12 clone RP11-328H16, WOR... 42 5.1 1
(AC019207) Homo sapiens chromosome X clone RP11-418N20, WORK... 42 5.1 1
(AC019200) Homo sapiens chromosome 11 clone RP11-379P15, WOR... 42 5.1 1
(AC017106) Homo sapiens chromosome X clone RP11-565G4, WORKI... 42 5.1 1
(AC016718) Homo sapiens chromosome 11 clone RP11-321F11, WOR... 42 5.1 1
(AC013783) Homo sapiens clone RP11-18G15, WORKING DRAFT SEQU... 42 5.1 1
(AC011281) Homo sapiens clone RP11-13L19, WORKING DRAFT SEQU... 42 5.1 1
(AC009555) Homo sapiens chromosome 16 clone RP11-24O9 map 16... 42 5.1 1
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 42 5.1 1
(AC004710) Plasmodium falciparum chromosome 12, *** SEQUENCI... 42 5.1 1
(BH499721) BOGDX17TR BOGD Brassica oleracea genomic clone BO... 42 5.1 1
(BH323458) CH230-53J22.TV CHORI-230 Segment 1 Rattus norvegi... 42 5.1 1
(AZ107037) RPCI-23-454A1.TJ RPCI-23 Mus musculus genomic clo... 42 5.1 1
(AZ083255) RPCI-23-454C3.TJ RPCI-23 Mus musculus genomic clo... 42 5.1 1
(FI297342) AdH1155-CPY2-A19TF AdH1 Arachis duranensis genomi... 42 5.1 1
(FI232371) CccaBb002-I18JF CccABb Cajanus cajan genomic clon... 42 5.1 1
(FI184621) MUGQ_CH252P025L08Sp6_GL380_022 CHORI-252 Vervet M... 42 5.1 1
(FH534333) CHO_OF4737xb02r1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 5.1 1
(FH360428) CHO_OF4690xi15f1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 5.1 1
(ET970580) CHO_OF648xl20f1.ab1 CHO_OF Nicotiana tabacum geno... 42 5.1 1
(ET718278) CHO_OF115xg23r1.ab1 CHO_OF Nicotiana tabacum geno... 42 5.1 1
(ET718194) CHO_OF115xg23f1.ab1 CHO_OF Nicotiana tabacum geno... 42 5.1 1
(ET647874) JBVRR03TR JBVR Allium cepa genomic clone JBVRO_RP... 42 5.1 1
(ET644592) JBVRR03TF JBVR Allium cepa genomic clone JBVRO_RP... 42 5.1 1
(ET178188) MUGQ_CH252P383J15Sp6_CP723_056 CHORI-252 Vervet M... 42 5.1 1
(EK421938) 1095515516811 Global-Ocean-Sampling_GS-31-01-01-1... 42 5.1 1
(AM617619) Entamoeba invadens IP1 GSS, clone inv099e12.q1k. 42 5.1 1
(AM607794) Entamoeba invadens IP1 GSS, clone inv083b01.p1k. 42 5.1 1
(EJ641320) 1093011914198 Global-Ocean-Sampling_GS-29-01-01-1... 42 5.1 1
(EJ068733) 1095458063730 Global-Ocean-Sampling_GS-26-01-01-1... 42 5.1 1
(EI500450) PV_GBa0120C19.r PV_GBa Phaseolus vulgaris genomic... 42 5.1 1
(EI488165) PV_GBa0103F02.r PV_GBa Phaseolus vulgaris genomic... 42 5.1 1
(EI482969) PV_GBa0096B14.r PV_GBa Phaseolus vulgaris genomic... 42 5.1 1
(ED817242) MUGQ_CH252P143N06T7_CN147_019 CHORI-252 Vervet Mo... 42 5.1 1
(ED659974) GM_WBa0081P08.r GM_WBa Glycine max genomic clone ... 42 5.1 1
(DX819685) MUGQ_CH252P069K10T7_AV1160_085 CHORI-252 Vervet M... 42 5.1 1
(DX470707) Cpl12743 Papaya Genomic DNA BAC Library Carica pa... 42 5.1 1
(DU354891) 1098312033655 CHORI-243 Ovis aries genomic clone ... 42 5.1 1
(DU065271) 72690 Tomato HindIII BAC Library Solanum lycopers... 42 5.1 1
(DH681475) Rattus norvegicus DNA, BAC clone: RNB1-234O14, 3'... 42 5.1 1
(DH518238) Rattus norvegicus DNA, BAC clone: RNB1-014L23, 3'... 42 5.1 1
(DE541792) Bombyx mori genomic DNA, Fosmid clone:GBMFno171_n... 42 5.1 1
(DE450812) Bombyx mori genomic DNA, Fosmid clone:GBMFno43_e1... 42 5.1 1
(CZ976410) 178304 Tomato MboI BAC Library Solanum lycopersic... 42 5.1 1
(CW506269) OP__Ba0005O05.r OP__Ba Oryza punctata genomic clo... 42 5.1 1
(CU971018) Brassica napus GSS, clone JBnB072E01, end read, p... 42 5.1 1
(CT558840) A BAC library has been constructed from cultivar ... 42 5.1 1
(CT553318) A BAC library has been constructed from cultivar ... 42 5.1 1
(CT553098) A BAC library has been constructed from cultivar ... 42 5.1 1
(CT552865) A BAC library has been constructed from cultivar ... 42 5.1 1
(CT552495) A BAC library has been constructed from cultivar ... 42 5.1 1
(CT550808) A BAC library has been constructed from cultivar ... 42 5.1 1
(CR505982) mth4-40A24FM1 BAC end, cultivar Jemalong A17 of M... 42 5.1 1
(CL501343) SAIL_696_B04.v1 SAIL Collection Arabidopsis thali... 42 5.1 1
(CE760334) tigr-gss-dog-17000369988137 Dog Library Canis lup... 42 5.1 1
(CE545731) tigr-gss-dog-17000366132674 Dog Library Canis lup... 42 5.1 1
(CE327761) tigr-gss-dog-17000333948005 Dog Library Canis lup... 42 5.1 1
(BZ575000) msh2_4254.y2 msh Pseudomonas aeruginosa genomic c... 42 5.1 1
(BZ188247) CH230-329F20.TV CHORI-230 Segment 2 Rattus norveg... 42 5.1 1
(BZ074966) lkg38g01.b1 B.oleracea002 Brassica oleracea genom... 42 5.1 1
(BZ040528) lka43d12.b1 B.oleracea002 Brassica oleracea genom... 42 5.1 1
(AG381845) Mus musculus molossinus DNA, clone:MSMg01-192A11.... 42 5.1 1
(AG371103) Mus musculus molossinus DNA, clone:MSMg01-176G06.... 42 5.1 1
(AG333983) Mus musculus molossinus DNA, clone:MSMg01-124L03.... 42 5.1 1
(ES390885) MUS13-F16.y1d-s SHGC-MUS Mytilus californianus cD... 42 5.1 1
(EL899587) CGF2003982_G05 WRN-02: Walnut root infected with... 42 5.1 1
(EL896407) CGF2003868_E02 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL896390) CGF2003868_C05 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL896378) CGF2003868_B01 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL896327) CGF2003867_E01 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL896238) CGF2003858_D01 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL896203) CGF2003857_H08 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL896158) CGF2003857_D01 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL896007) CGF2003855_E06 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL895930) CGF2002913_D06 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL895699) CGF2002910_D10 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL895544) CGF2002908_D09 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL895263) CGF2002522_F08 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL895078) CGF2002505_G01 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL894907) CGF2002502_C10 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL894703) CGF2002499_E03 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL894390) CGF2002468_A11 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL894201) CGF2002463_E09 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL894129) CGF2002399_D07 WLO-02: Walnut leaf Juglans hinds... 42 5.1 1
(EL893808) CGF2003834_A12 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893542) CGF2003824_E02 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893537) CGF2003824_D06 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893517) CGF2003824_B06 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893490) CGF2003823_G12 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893458) CGF2003823_D05 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893408) CGF2003822_G06 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893251) CGF2003816_D10 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893233) CGF2003816_B10 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893149) CGF2003815_A06 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893121) CGF2003814_F09 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893089) CGF2003814_C04 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893086) CGF2003814_C01 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL893066) CGF2003813_H04 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL892749) CGF2003805_H06 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL892662) CGF2003506_F12 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL892386) CGF2003503_A09 WLN-02: walnut leaf from plants i... 42 5.1 1
(EL892373) CGF2003502_H04 WLN-02: walnut leaf from plants i... 42 5.1 1

>(AY387646) Dictyostelium discoideum Phg1B (phg1b) gene, complete cds.
Length = 5747

Score = 119 bits (60), Expect = 3e-23
Identities = 60/60 (100%)
Strand = Plus / Minus


Query: 28 cctaaccaacgagtgtctaaccgttatttataatattatatatataattgattttgtttg 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5492 cctaaccaacgagtgtctaaccgttatttataatattatatatataattgattttgtttg 5433

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 123,991,370
Number of extensions: 9417133
Number of successful extensions: 3457657
Number of sequences better than 10.0: 594
Length of query: 149
Length of database: 98,766,808,389
Length adjustment: 22
Effective length of query: 127
Effective length of database: 96,605,827,083
Effective search space: 12268940039541
Effective search space used: 12268940039541
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15498-1 (Contig-U15498-1Q) /CSM_Contig/Contig-U15498-1Q.Seq.d
(149 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 127,950,232
Number of extensions: 1394520
Number of successful extensions: 2902
Number of sequences better than 10.0: 0
Number of HSP's gapped: 2899
Number of HSP's successfully gapped: 0
Length of query: 49
Length of database: 1,051,180,864
Length adjustment: 22
Effective length of query: 27
Effective length of database: 979,976,566
Effective search space: 26459367282
Effective search space used: 26459367282
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 25 (14.2 bits)

PSORT

psg: 0.96 gvh: 0.50 alm: 0.28 top: 0.67 tms: 0.07 mit: 0.18 mip: 0.00
nuc: 0.06 erl: 0.00 erm: 1.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.34 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

32.0 %: cytoplasmic
24.0 %: mitochondrial
20.0 %: nuclear
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U15498-1 is cyt

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0