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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U15494-1
Contig ID Contig-U15494-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U15494-1 (Contig-U15494-1Q) /CSM_Contig/Contig-U15494-1Q.Seq.d
AATTTTTTCGCTTAATCGTATATCTGCACACATATAGAAAAAATGGTTCA
AAGACTTACCTACAGAAGAAGATTATCTTACCGTACTACTTCTAACGCTA
CCAAAATCGTCAAGACTCCAGGTGGTAGATTAGTATACCAATACATCGGT
AAAACTGGTAAAGTTCCAAGATGTGGTGAATGTGGTGTCAACTTAGCCGG
TATCCCAGCCTTAAGACCATACCAATACAAAAATCTTCCAAAATCAAGAA
GAACTGTTTCACGTGCTTATGGTGGTAGCAAATGTGCCAAATGTGTCCGT
AACAGAATCGTTCGTGCTTTCTTAATTGAAGAACAAAAAACCGCTAAAAT
TGTCTTCAAGAAGCAACAAAAAGATTTAAAACAAAAGAAAGATAAGAAAT
CATCCAAATAAATGTAGTGATTAATATCAATCATTTTTTACTTATAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 488
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4402093
End point 4401640
Strand (PLUS/MINUS) MINUS
Number of clones 72
Number of EST 101
Link to clone list U15494
List of clone(s) 

est1=VFH793F,-3,468
est2=VFM110F,1,457
est3=VHM172F,1,477
est4=VHN630Z,6,249
est5=VFD321F,10,457
est6=VFA318F,14,457
est7=VFA318Z,14,416
est8=VFH793Z,14,456
est9=VFJ523F,14,478
est10=VFJ523Z,14,414
est11=VFN867F,14,457
est12=VFN867Z,14,433
est13=VHK660F,14,455
est14=VHK836F,14,455
est15=VFM110Z,19,440
est16=VSI288F,19,457
est17=VSE559E,20,448
est18=VSH766E,21,434
est19=SFL482F,22,455
est20=SFL482Z,22,415
est21=VSA836E,22,454
est22=VSG124F,25,457
est23=VSG124Z,25,446
est24=VSJ281Z,25,446
est25=VSF802F,26,478
est26=VSF802Z,26,456
est27=VSI337F,26,457
est28=VSI337Z,26,419
est29=VSI603Z,26,440
est30=VSG738F,27,455
est31=VSI618Z,28,435
est32=FC-BP08E,29,483
est33=VSH586F,29,457
est34=VSH586Z,29,434
est35=VSI653F,29,457
est36=VSI653Z,29,434
est37=VSI245F,30,457
est38=VSI226F,31,457
est39=VSI226Z,31,419
est40=VSI288Z,31,441
est41=VSI603F,31,457
est42=SSH474E,32,448
est43=VSE858E,32,473
est44=VSI411F,32,488
est45=VSI411Z,32,419
est46=SSH338F,34,353
est47=SSA477F,36,454
est48=VSB253E,36,447
est49=VSG610F,36,478
est50=SSK146E,37,446
est51=VSA657E,37,461
est52=VSB582E,37,447
est53=VSC441E,37,448
est54=VSC542E,37,451
est55=VSC543E,37,452
est56=VSD452F,37,457
est57=VSD452Z,37,440
est58=VSE275E,37,453
est59=VSF443F,37,457
est60=VSF443Z,37,419
est61=VSI558F,37,457
est62=VSI558Z,37,445
est63=VSJ188F,37,457
est64=VSJ188Z,37,441
est65=VSJ281F,37,457
est66=VSJ330F,37,457
est67=VSJ330Z,37,434
est68=VSI245Z,38,419
est69=VSJ385F,38,457
est70=VSJ385Z,38,446
est71=VSJ658E,38,446
est72=VSC534E,39,468
est73=VSE680E,39,468
est74=VSI618F,40,457
est75=VSI753F,46,457
est76=VSI753Z,46,434
est77=FC-BR08E,47,488
est78=FC-IC0428Z,47,432
est79=VSI391F,47,457
est80=VSI391Z,47,419
est81=VSA238E,49,449
est82=VSG154F,51,457
est83=VSG184F,51,457
est84=VSI409Z,51,427
est85=VSC556E,52,447
est86=VSI409F,52,457
est87=VSD523F,54,457
est88=VSD523Z,54,440
est89=FC-IC1407E,61,432
est90=FC-IC1542F,61,424
est91=FC-IC1543E,61,432
est92=SSH338Z,61,445
est93=VSF289F,72,457
est94=VSF289Z,72,419
est95=VSI121F,72,457
est96=VSI121Z,72,419
est97=VFH316Z,77,329
est98=SSH349Z,87,467
est99=SSL417Z,124,462
est100=FC-IC1542Z,129,432
est101=VSG154Z,186,351
Translated Amino Acid sequence 
nffa*SYICTHIEKMVQRLTYRRRLSYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGE
CGVNLAGIPALRPYQYKNLPKSRRTVSRAYGGSKCAKCVRNRIVRAFLIEEQKTAKIVFK
KQQKDLKQKKDKKSSK*m**lisiifyl*kkkkkkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
nffa*SYICTHIEKMVQRLTYRRRLSYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGE
CGVNLAGIPALRPYQYKNLPKSRRTVSRAYGGSKCAKCVRNRIVRAFLIEEQKTAKIVFK
KQQKDLKQKKDKKSSK*m**lisiifyl*kkkkkkkkkkkkk


Frame B:
ifslnrisahi*kkwfkdlpteedyltvllltlpkssrlqvvd*ytntsvklvkfqdvvn
vvst*pvsqp*dhtntkifqnqeelfhvlmvvanvpnvsvtesfvls*lknkkplklssr
snkki*nkrkirnhpnkcsd*yqsfftykkkkkkkkkkkkkk


Frame C:
ffrlivylhtyrkngsktylqkkiilpyyf*ryqnrqdsrw*isipihr*nw*sskmw*m
wcqlsrypslktipiqksskikkncftclww*qmcqmcp*qnrscfln*rtknr*nclqe
atkrfktker*eiiqinvvininhfllikkkkkkkkkkkkkk
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U15494-1 (Contig-U15494-1Q)
/CSM_Contig/Contig-U15494-1Q.Seq.d
         (488 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15494-1 (Contig-U15494-1Q) /CSM_Contig/Conti...   882  0.0
Contig-U13885-1 (Contig-U13885-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U15516-1 (Contig-U15516-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U12463-1 (Contig-U12463-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U12006-1 (Contig-U12006-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U09640-1 (Contig-U09640-1Q) /CSM_Contig/Conti...    36  0.048
Contig-U15800-1 (Contig-U15800-1Q) /CSM_Contig/Conti...    34  0.19
Contig-U13595-1 (Contig-U13595-1Q) /CSM_Contig/Conti...    34  0.19
Contig-U11360-1 (Contig-U11360-1Q) /CSM_Contig/Conti...    34  0.19

>Contig-U15494-1 (Contig-U15494-1Q) /CSM_Contig/Contig-U15494-1Q.Seq.d
          Length = 488

 Score =  882 bits (445), Expect = 0.0
 Identities = 445/445 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattttttcgcttaatcgtatatctgcacacatatagaaaaaatggttcaaagacttacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aattttttcgcttaatcgtatatctgcacacatatagaaaaaatggttcaaagacttacc 60

                                                                       
Query: 61  tacagaagaagattatcttaccgtactacttctaacgctaccaaaatcgtcaagactcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacagaagaagattatcttaccgtactacttctaacgctaccaaaatcgtcaagactcca 120

                                                                       
Query: 121 ggtggtagattagtataccaatacatcggtaaaactggtaaagttccaagatgtggtgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtggtagattagtataccaatacatcggtaaaactggtaaagttccaagatgtggtgaa 180

                                                                       
Query: 181 tgtggtgtcaacttagccggtatcccagccttaagaccataccaatacaaaaatcttcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtggtgtcaacttagccggtatcccagccttaagaccataccaatacaaaaatcttcca 240

                                                                       
Query: 241 aaatcaagaagaactgtttcacgtgcttatggtggtagcaaatgtgccaaatgtgtccgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatcaagaagaactgtttcacgtgcttatggtggtagcaaatgtgccaaatgtgtccgt 300

                                                                       
Query: 301 aacagaatcgttcgtgctttcttaattgaagaacaaaaaaccgctaaaattgtcttcaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacagaatcgttcgtgctttcttaattgaagaacaaaaaaccgctaaaattgtcttcaag 360

                                                                       
Query: 361 aagcaacaaaaagatttaaaacaaaagaaagataagaaatcatccaaataaatgtagtga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcaacaaaaagatttaaaacaaaagaaagataagaaatcatccaaataaatgtagtga 420

                                    
Query: 421 ttaatatcaatcattttttacttat 445
           |||||||||||||||||||||||||
Sbjct: 421 ttaatatcaatcattttttacttat 445


>Contig-U13885-1 (Contig-U13885-1Q) /CSM_Contig/Contig-U13885-1Q.Seq.d
          Length = 1396

 Score = 40.1 bits (20), Expect = 0.003
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 368  aaaaagatttaaaacaaaagaaagataagaaa 399
            ||||||||  |||| |||||||||||||||||
Sbjct: 1255 aaaaagataaaaaagaaaagaaagataagaaa 1286


>Contig-U15516-1 (Contig-U15516-1Q) /CSM_Contig/Contig-U15516-1Q.Seq.d
          Length = 3518

 Score = 36.2 bits (18), Expect = 0.048
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 383  aaaagaaagataagaaatcatc 404
            |||||||||| |||||||||||
Sbjct: 1211 aaaagaaagaaaagaaatcatc 1232


 Score = 36.2 bits (18), Expect = 0.048
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 383  aaaagaaagataagaaatcatc 404
            |||||||||| |||||||||||
Sbjct: 3346 aaaagaaagaaaagaaatcatc 3367


 Score = 36.2 bits (18), Expect = 0.048
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 383  aaaagaaagataagaaatcatc 404
            |||||||||| |||||||||||
Sbjct: 3295 aaaagaaagaaaagaaatcatc 3316


 Score = 36.2 bits (18), Expect = 0.048
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 383  aaaagaaagataagaaatcatc 404
            |||||||||| |||||||||||
Sbjct: 1262 aaaagaaagaaaagaaatcatc 1283


 Score = 34.2 bits (17), Expect = 0.19
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 383  aaaagaaagataagaaa 399
            |||||||||||||||||
Sbjct: 3148 aaaagaaagataagaaa 3164


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6300
Number of Sequences: 8402
Number of extensions: 6300
Number of successful extensions: 725
Number of sequences better than 10.0: 85
length of query: 488
length of database: 8,075,542
effective HSP length: 16
effective length of query: 472
effective length of database: 7,941,110
effective search space: 3748203920
effective search space used: 3748203920
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.29
Homology vs DNA 
Query= Contig-U15494-1 (Contig-U15494-1Q) /CSM_Contig/Contig-U15494-1Q.Seq.d
         (488 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ425437) Dictyostelium discoideum cDNA clone:ddv55o17, 5' ...   648   0.0    2
(BJ412148) Dictyostelium discoideum cDNA clone:ddv7j05, 5' e...   630   0.0    2
(BJ424483) Dictyostelium discoideum cDNA clone:ddv52g16, 5' ...   622   0.0    2
(BJ424409) Dictyostelium discoideum cDNA clone:ddv52h10, 5' ...   622   0.0    2
(BJ417720) Dictyostelium discoideum cDNA clone:ddv28f18, 5' ...   622   0.0    2
(BJ410566) Dictyostelium discoideum cDNA clone:ddv1d05, 5' e...   622   0.0    2
(BJ414708) Dictyostelium discoideum cDNA clone:ddv20m05, 5' ...   617   0.0    2
(AU263199) Dictyostelium discoideum vegetative cDNA clone:VS...   611   0.0    2
(AU261773) Dictyostelium discoideum vegetative cDNA clone:VS...   607   0.0    2
(BJ390804) Dictyostelium discoideum cDNA clone:dds23d22, 5' ...   607   0.0    2
(AU268532) Dictyostelium discoideum vegetative cDNA clone:VS...   599   0.0    2
(AU265812) Dictyostelium discoideum vegetative cDNA clone:VS...   599   0.0    2
(AU265999) Dictyostelium discoideum vegetative cDNA clone:VS...   601   0.0    2
(BJ434443) Dictyostelium discoideum cDNA clone:ddv16j23, 3' ...   622   0.0    3
(AU266769) Dictyostelium discoideum vegetative cDNA clone:VS...   597   0.0    2
(AU269030) Dictyostelium discoideum vegetative cDNA clone:VS...   593   0.0    2
(AU267672) Dictyostelium discoideum vegetative cDNA clone:VS...   593   0.0    2
(AU268456) Dictyostelium discoideum vegetative cDNA clone:VS...   589   0.0    2
(AU038253) Dictyostelium discoideum slug cDNA, clone SSH474.      587   0.0    2
(AU263434) Dictyostelium discoideum vegetative cDNA clone:VS...   587   0.0    2
(AU268650) Dictyostelium discoideum vegetative cDNA clone:VS...   587   0.0    2
(BJ413762) Dictyostelium discoideum cDNA clone:ddv16j23, 5' ...   543   0.0    4
(BJ416118) Dictyostelium discoideum cDNA clone:ddv25c03, 5' ...   589   0.0    2
(AU261919) Dictyostelium discoideum vegetative cDNA clone:VS...   579   0.0    2
(AU262111) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(C91380) Dictyostelium discoideum slug cDNA, clone SSK146.        577   e-180  2
(AU262634) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU262635) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU262987) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU269760) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU269544) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU265238) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU264054) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU261638) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-180  2
(AU269840) Dictyostelium discoideum vegetative cDNA clone:VS...   575   e-179  2
(AU266658) Dictyostelium discoideum vegetative cDNA clone:VS...   575   e-179  2
(AU268948) Dictyostelium discoideum vegetative cDNA clone:VS...   573   e-179  2
(AU265813) Dictyostelium discoideum vegetative cDNA clone:VS...   599   e-179  2
(AU263290) Dictyostelium discoideum vegetative cDNA clone:VS...   573   e-179  2
(AU268968) Dictyostelium discoideum vegetative cDNA clone:VS...   571   e-178  2
(AU262565) Dictyostelium discoideum vegetative cDNA clone:VS...   569   e-178  2
(AU269690) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-178  2
(AU268885) Dictyostelium discoideum vegetative cDNA clone:VS...   569   e-178  2
(AU284956) Dictyostelium discoideum gamete cDNA clone:FC-BR0...   585   e-178  2
(BJ435828) Dictyostelium discoideum cDNA clone:ddv28f18, 3' ...   622   e-177  2
(AU266000) Dictyostelium discoideum vegetative cDNA clone:VS...   601   e-177  2
(AU268352) Dictyostelium discoideum vegetative cDNA clone:VS...   426   e-177  3
(BJ428731) Dictyostelium discoideum cDNA clone:ddv1d05, 3' e...   622   e-175  2
(AU270271) Dictyostelium discoideum vegetative cDNA clone:VS...   575   e-175  2
(AU269841) Dictyostelium discoideum vegetative cDNA clone:VS...   575   e-175  2
(BJ434802) Dictyostelium discoideum cDNA clone:ddv25c03, 3' ...   595   e-175  2
(AU269180) Dictyostelium discoideum vegetative cDNA clone:VS...   559   e-175  2
(BJ432895) Dictyostelium discoideum cDNA clone:ddv20m05, 3' ...   622   e-174  2
(AU268624) Dictyostelium discoideum vegetative cDNA clone:VS...   557   e-174  2
(AU268384) Dictyostelium discoideum vegetative cDNA clone:VS...   543   e-173  3
(AU261375) Dictyostelium discoideum vegetative cDNA clone:VS...   553   e-173  2
(AU269545) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-173  2
(AU267673) Dictyostelium discoideum vegetative cDNA clone:VS...   593   e-173  2
(AU268886) Dictyostelium discoideum vegetative cDNA clone:VS...   569   e-173  2
(AU262629) Dictyostelium discoideum vegetative cDNA clone:VS...   557   e-173  2
(AU264055) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-172  2
(AU267941) Dictyostelium discoideum vegetative cDNA clone:VS...   589   e-172  2
(AU268949) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-172  2
(AU284904) Dictyostelium discoideum gamete cDNA clone:FC-BP0...   567   e-172  2
(AU262642) Dictyostelium discoideum vegetative cDNA clone:VS...   549   e-172  2
(AU268648) Dictyostelium discoideum vegetative cDNA clone:VS...   549   e-172  2
(BJ401593) Dictyostelium discoideum cDNA clone:dds23d22, 3' ...   607   e-171  2
(AU264173) Dictyostelium discoideum vegetative cDNA clone:VS...   545   e-171  2
(AU269691) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-170  2
(AU266049) Dictyostelium discoideum vegetative cDNA clone:VS...   541   e-169  2
(AU269031) Dictyostelium discoideum vegetative cDNA clone:VS...   593   e-169  3
(AU269761) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-168  2
(AU268533) Dictyostelium discoideum vegetative cDNA clone:VS...   599   e-167  1
(AU268457) Dictyostelium discoideum vegetative cDNA clone:VS...   589   e-166  2
(AU266096) Dictyostelium discoideum vegetative cDNA clone:VS...   472   e-166  3
(AU268969) Dictyostelium discoideum vegetative cDNA clone:VS...   565   e-165  2
(AU268651) Dictyostelium discoideum vegetative cDNA clone:VS...   587   e-164  2
(AU265239) Dictyostelium discoideum vegetative cDNA clone:VS...   577   e-163  2
(AU268385) Dictyostelium discoideum vegetative cDNA clone:VS...   575   e-163  2
(AU264174) Dictyostelium discoideum vegetative cDNA clone:VS...   545   e-163  2
(AU268181) Dictyostelium discoideum vegetative cDNA clone:VS...   509   e-160  2
(AU264999) Dictyostelium discoideum vegetative cDNA clone:VS...   509   e-160  2
(AU269181) Dictyostelium discoideum vegetative cDNA clone:VS...   559   e-159  3
(AU268353) Dictyostelium discoideum vegetative cDNA clone:VS...   426   e-158  3
(AU268625) Dictyostelium discoideum vegetative cDNA clone:VS...   557   e-155  2
(AU268649) Dictyostelium discoideum vegetative cDNA clone:VS...   551   e-155  2
(AU275053) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   482   e-151  2
(AU275052) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   482   e-151  2
(AU272475) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   482   e-151  2
(AU272474) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   482   e-151  2
(AU271594) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   482   e-151  2
(AU038153) Dictyostelium discoideum slug cDNA, clone SSH338.      468   e-145  2
(AU268182) Dictyostelium discoideum vegetative cDNA clone:VS...   509   e-141  2
(AU265000) Dictyostelium discoideum vegetative cDNA clone:VS...   509   e-141  2
(BJ431710) Dictyostelium discoideum cDNA clone:ddv15p03, 3' ...   500   e-137  1
(AU275050) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   428   e-134  2
(AU073483) Dictyostelium discoideum slug cDNA, clone SSH338.      476   e-130  1
(AU072657) Dictyostelium discoideum slug cDNA, clone SSA477.      472   e-129  1
(AU038737) Dictyostelium discoideum slug cDNA, clone SSL417.      404   e-128  2
(BJ445080) Dictyostelium discoideum cDNA clone:ddv58k08, 3' ...   440   e-119  1
(AU267940) Dictyostelium discoideum vegetative cDNA clone:VS...   410   e-110  1
(AU270270) Dictyostelium discoideum vegetative cDNA clone:VS...   396   e-106  1
(AU275051) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   394   e-105  1
(AU038161) Dictyostelium discoideum slug cDNA, clone SSH349.      323   e-100  2
(AU261782) Dictyostelium discoideum vegetative cDNA clone:VS...   303   4e-98  2
(AU266050) Dictyostelium discoideum vegetative cDNA clone:VS...   135   2e-36  2
(DY894986) CeleSEQ14693 Cunninghamella elegans pBluescript (...    40   3e-04  3
(ES976327) EX20LIB9_UP_059_H03_166FEB2005_017 Brassica napus...    44   4e-04  2
(DY895182) CeleSEQ14948 Cunninghamella elegans pBluescript (...    40   6e-04  3
(CO540396) tai10b08.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO539575) tai19b04.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO539012) tai05f09.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO538812) tai05f09.x1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO720126) tai38g11.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO539457) tai17c12.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO536022) tai10b08.x1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO539515) tai18c06.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO720185) tai40b04.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO538998) tai05e04.y1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(CO538804) tai05e04.x1 HyEch JUMY T1 Hydractinia echinata cD...    42   0.001  2
(EV541098) RR2AM17JQ RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.005  3
(EV536716) RR2AM17TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.005  3
(EY907403) RR2DV49TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.005  3
(ES929153) 36RDBRG_UP_076_E07_19JAN2006_055 Brassica rapa 36...    36   0.009  3
(EE530245) 39RDBRT_UP_074_F09_01DEC2005_069 Brassica rapa 39...    36   0.010  3
(ES962167) 9RDBNGA_UP_224_A03_05NOV2006_031 Brassica napus 9...    36   0.010  3
(EE522960) 37RDBRH_UP_010_D09_29MAR2004_073 Brassica rapa 37...    36   0.012  3
(EE521517) 36RDBRG_UP_067_C04_29NOV2005_028 Brassica rapa 36...    36   0.012  3
(DY013284) 8RDBRH_UP_022_C10_17SEP2003_076 Brassica rapa - 8...    36   0.012  3
(ES995525) BNAEN3GH_UP_039_F12_01SEP2006_086 Brassica napus ...    36   0.013  3
(EV007311) BNAEN3GH_UP_213_C02_27NOV2006_012 Brassica napus ...    36   0.013  3
(ES933566) 37RDBRH_UP_099_C07_24JAN2006_059 Brassica rapa 37...    36   0.014  3
(EE529005) 39RDBRT_UP_053_F04_30NOV2005_022 Brassica rapa 39...    36   0.014  3
(CX269723) 39RDBRT_UP_002_B09_02APR2004_077 Brassica rapa 39...    36   0.014  3
(EV060937) BNSCS3CT_UP_303_B08_01JUN2007_062 Brassica napus ...    36   0.015  3
(EE402745) 16ACDHDS_UP_014_C06_15OCT2004_044 Brassica napus ...    36   0.015  3
(CD812811) BN10.022I17F020208 BN10 Brassica napus cDNA clone...    36   0.015  3
(EE514560) 26RDBNT_UP_052_B09_10NOV2005_077 Brassica napus 2...    36   0.015  3
(ES920317) 24RDBNH_UP_154_A12_14DEC2006_096 Brassica napus 2...    36   0.015  3
(EV005607) BNAEN3GH_UP_191_D01_26NOV2006_009 Brassica napus ...    36   0.015  3
(ES937128) 39RDBRT_UP_092_A10_25JAN2006_080 Brassica rapa 39...    36   0.016  3
(ES928844) 26RDBNT_UP_108_A10_09MAR2006_080 Brassica napus 2...    36   0.016  3
(ES933369) 37RDBRH_UP_096_F03_23JAN2006_021 Brassica rapa 37...    36   0.016  3
(CN736277) 26RDBNT_UP_014_A04_21JAN2004_032 Brassica napus 2...    36   0.016  3
(EE523593) 37RDBRH_UP_018_A05_31MAR2004_047 Brassica rapa 37...    36   0.016  3
(ES920182) 24RDBNH_UP_152_F01_13DEC2006_005 Brassica napus 2...    36   0.016  3
(ES986974) BNAEN1GH_UP_010_G12_30MAY2006_084 Brassica napus ...    36   0.016  3
(EE425997) 32ETGS24_UP_006_H01_11MAR2004_001 Brassica napus ...    36   0.016  3
(ES967953) BNZB_UP_196_D02_13MAR2006_010 Brassica napus BNZB...    36   0.016  3
(ES991895) BNAEN1GH_UP_073_E09_22JUL2006_071 Brassica napus ...    36   0.017  3
(ES959184) 9RDBNGA_UP_188_H02_13SEPT2006_002 Brassica napus ...    36   0.017  3
(EE443171) 72ETGS24_UP_003_D12_18MAY2005_090 72ETGS24 Brassi...    36   0.017  3
(ES953725) 9RDBNGA_UP_113_G04_15SEP2005_020 Brassica napus 9...    36   0.017  3
(ES934569) 38RDBRM_UP_081_D10_18JAN2006_074 Brassica rapa 38...    36   0.017  3
(ES936964) 39RDBRT_UP_090_A09_25JAN2006_079 Brassica rapa 39...    36   0.017  3
(EE426689) 32ETGS24_UP_014_G01_11FEB2005_003 Brassica napus ...    36   0.017  3
(ES989250) BNAEN1GH_UP_041_C09_21JUL2006_075 Brassica napus ...    36   0.017  3
(CN737225) 26RDBNT_UP_024_F04_22JAN2004_022 Brassica napus 2...    36   0.017  3
(EE516256) 36RDBRG_UP_002_F03_09JUN2004_021 Brassica rapa 36...    36   0.017  3
(EE543483) 9RDBNGA_UP_040_B08_03DEC2003_062 Brassica napus -...    36   0.017  3
(EE513349) 26RDBNT_UP_037_B04_16FEB2004_030 Brassica napus 2...    36   0.018  3
(EE508096) 24RDBNH_UP_052_A04_29FEB2004_032 Brassica napus 2...    36   0.018  3
(CN732346) 24RDBNH_UP_029_B06_12JAN2004_046 Brassica napus 2...    36   0.018  3
(EE515456) 26RDBNT_UP_065_A03_10NOV2005_031 Brassica napus 2...    36   0.018  3
(CX272939) 39RDBRT_UP_048_C04_22JUL2004_028 Brassica rapa 39...    36   0.018  3
(ES917345) 24RDBNH_T3_119_B04_22SEP2006_030 Brassica napus 2...    36   0.018  3
(EE435556) 5ETGS9H_UP_002_C02_15MAY2003_006 Brassica napus 5...    36   0.018  3
(EE514051) 26RDBNT_UP_045_C09_16FEB2004_075 Brassica napus 2...    36   0.019  3
(EV005892) BNAEN3GH_UP_195_A02_27NOV2006_016 Brassica napus ...    36   0.019  3
(EV004946) BNAEN3GH_UP_174_H07_11NOV2006_049 Brassica napus ...    36   0.019  3
(EE516679) 36RDBRG_UP_007_D05_10JUN2004_041 Brassica rapa 36...    36   0.019  3
(CX269304) 38RDBRM_UP_046_D05_16JUL2004_041 Brassica rapa 38...    36   0.019  3
(EE522975) 37RDBRH_UP_010_F04_29MAR2004_022 Brassica rapa 37...    36   0.019  3
(CN737078) 26RDBNT_UP_023_A08_22JAN2004_064 Brassica napus 2...    36   0.019  3
(ES936421) 39RDBRT_UP_083_B05_24JAN2006_045 Brassica rapa 39...    36   0.019  3
(ES924165) 25RDBNM_UP_079_B11_04MAR2006_093 Brassica napus 2...    36   0.020  3
(EE511175) 25RDBNM_UP_046_G12_04MAR2004_084 Brassica napus 2...    36   0.020  3
(EE428157) 33ETGS36_UP_008_D06_17MAR2004_042 Brassica napus ...    36   0.021  3
(EE524654) 37RDBRH_UP_031_G02_05JUL2004_004 Brassica rapa 37...    36   0.021  3
(EV050659) BNSCS3CT_UP_175_A12_12MAY2007_096 Brassica napus ...    36   0.022  3
(EV045581) BNSCS3CT_UP_113_H02_07MAY2007_002 Brassica napus ...    36   0.022  3
(EV031441) BNSCS2CT_UP_214_D11_28APR2007_089 Brassica napus ...    36   0.022  3
(EV165053) 0167719 Brassica napus Late bud Brassica napus cD...    36   0.030  3
(EV225356) 0107282 Brassica napus Damaged cotyledons Brassic...    36   0.032  3
(EV225027) 0106953 Brassica napus Damaged cotyledons Brassic...    36   0.032  3
(EV170338) 0149844 Brassica napus Etiolated seedlings (Uni-Z...    36   0.041  3
(EV170297) 0149765 Brassica napus Etiolated seedlings (Uni-Z...    36   0.042  3
(EY949686) RS3E391TF RS3(RT) Raphanus sativus cDNA 5', mRNA ...    36   0.056  3
(EY945153) RS3E391JQ RS3(RT) Raphanus sativus cDNA 3', mRNA ...    36   0.056  3
(EL592739) 65JKBNMO_UP_074_D12_18JUL2006_090 65JKBNM0 Brassi...    36   0.057  2
(EG020375) BMSB01-T7-10-H05 Brassica napus Full-length cDNA ...    36   0.058  2
(EV524961) RR1A685TF RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.058  3
(FD551204) RR3FH65TF RR3(NY) Raphanus raphanistrum subsp. ra...    36   0.063  3
(FD547095) RR3FH65JQ RR3(NY) Raphanus raphanistrum subsp. ra...    36   0.063  3
(EV530422) RR1AF64JQ RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.064  3
(EV525763) RR1AF64TF RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.064  3
(FD567310) RS1FE59JQ RS1(AR) Raphanus sativus var. oleiformi...    36   0.065  3
(ES976274) EX20LIB9_UP_059_C03_166FEB2005_027 Brassica napus...    36   0.066  2
(EV529718) RR1A526JQ RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.067  3
(EV524814) RR1A526TF RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.067  3
(FD543963) RR2FR36TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.068  3
(FD947877) RS2GS03TF RS2(RS) Raphanus sativus cDNA 5', mRNA ...    36   0.068  3
(FD943746) RS2GS03JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ...    36   0.068  3
(FD539674) RR2FR36JQ RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.068  3
(FD941426) RS1H096TF RS1(AR) Raphanus sativus var. oleiformi...    36   0.070  3
(FD937068) RS1H096JQB RS1(AR) Raphanus sativus var. oleiform...    36   0.071  3
(ES951589) 9RDBNGA_UP_085_E01_05APR2005_007 Brassica napus 9...    36   0.073  2
(ES265855) 44JK5DM_UP_006_D07_26MAY2004_057 44JK5DM Brassica...    36   0.074  2
(EE537875) 61RDBNCM_UP_023_A05_12NOV2004_047 Brassica napus ...    36   0.075  2
(AM061793) Brassica oleracea var. alboglabra EST, clone  AAF...    36   0.076  2
(EX892533) RS1C746JQ RS1(AR) Raphanus sativus var. oleiformi...    36   0.077  3
(DU768425) ANIW9543.b2 HF4000_12-21-03 uncultured marine mic...    50   0.077  1
(EX888633) RS1C746TF RS1(AR) Raphanus sativus var. oleiformi...    36   0.078  3
(ES915624) 24RDBNH_T3_113_B07_22SEP2006_061 Brassica napus 2...    36   0.079  2
(EE514258) 26RDBNT_UP_048_E09_16FEB2004_071 Brassica napus 2...    36   0.079  2
(EL592358) 65JKBNMO_UP_068_G04_17JUL2006_020 65JKBNM0 Brassi...    36   0.081  2
(EV015010) BNSCS1CT_UP_067_H02_26MAR2007_002 Brassica napus ...    36   0.081  2
(EL587633) 65JKBNM0_T3_011_F07_17MAR2005_053 65JKBNM0 Brassi...    36   0.082  2
(ES957411) 9RDBNGA_UP_165_A04_12MAR2006_032 Brassica napus 9...    36   0.083  2
(FD945929) RS2G543TF RS2(RS) Raphanus sativus cDNA 5', mRNA ...    36   0.084  3
(FD942137) RS2G543JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ...    36   0.084  3
(ES956873) 9RDBNGA_UP_157_E11_10MAR2006_087 Brassica napus 9...    36   0.084  2
(EL592963) 65JKBNMO_UP_077_F09_18JUL2006_069 65JKBNM0 Brassi...    36   0.086  2
(EL592833) 65JKBNMO_UP_075_H06_18JUL2006_034 65JKBNM0 Brassi...    36   0.088  2
(FG565747) BN18DYSC_UP_151_C05_3APR2008_043 BN18DYSC Brassic...    36   0.088  2
(ES933812) 37RDBRH_UP_103_B11_24JAN2006_093 Brassica rapa 37...    36   0.088  2
(ES928014) 26RDBNT_UP_098_F02_10MAR2006_006 Brassica napus 2...    36   0.088  2
(EV045397) BNSCS3CT_UP_111_F06_07MAY2007_038 Brassica napus ...    36   0.089  2
(AM058803) Brassica oleracea var. alboglabra EST, clone  AAF...    36   0.089  2
(ES992849) BNAEN3GH_UP_001_F04_11MAY2006_022 Brassica napus ...    36   0.089  2
(EV028476) BNSCS2CT_UP_173_H09_27APR2007_065 Brassica napus ...    36   0.089  2
(EL590961) 65JKBNMO_UP_051_A09_17JUL2006_079 65JKBNM0 Brassi...    36   0.089  2
(ES988635) BNAEN1GH_UP_034_B05_21JUL2006_045 Brassica napus ...    36   0.089  2
(ES937290) 39RDBRT_UP_094_B03_25JAN2006_029 Brassica rapa 39...    36   0.089  2
(ES913101) BNARO6GH_T3_031_A05_08DEC2006_047 Brassica napus ...    36   0.089  2
(ES999792) BNAEN3GH_UP_099_E05_15SEP2006_039 Brassica napus ...    36   0.089  2
(CD822146) BN25.044D01F011129 BN25 Brassica napus cDNA clone...    36   0.090  2
(EV074157) BNSCS4CT_UP_205_D12_23MAY2007_090 Brassica napus ...    36   0.090  2
(EV072598) BNSCS4CT_UP_184_B10_22MAY2007_078 Brassica napus ...    36   0.090  2
(ES922590) 24RDBNH_UP_180_B01_14DEC2006_013 Brassica napus 2...    36   0.090  2
(ES920227) 24RDBNH_UP_153_B01_13DEC2006_013 Brassica napus 2...    36   0.090  2
(ES917148) 24RDBNH_UP_108_A08_9MAR2006_064 Brassica napus 24...    36   0.090  2
(EL591537) 65JKBNMO_UP_058_E05_17JUL2006_039 65JKBNM0 Brassi...    36   0.090  2
(ES994025) BNAEN3GH_UP_018_F09_23JUN2006_069 Brassica napus ...    36   0.090  2
(ES905484) BNARO4GH_T3_030_D06_25NOV2006_042 Brassica napus ...    36   0.090  2
(EL592678) 65JKBNMO_UP_073_F10_17JUL2006_070 65JKBNM0 Brassi...    36   0.091  2
(CD834289) BN45.041D21F011207 BN45 Brassica napus cDNA clone...    36   0.091  2
(ES948072) 49RDOAT_UP_058_G04_27JAN2006_020 Brassica olerace...    36   0.091  2
(CX268735) 38RDBRM_UP_038_F02_14JUL2004_006 Brassica rapa 38...    36   0.091  2
(EL588911) 65JKBNM0_T3_026_E09_18MAR2005_071 65JKBNM0 Brassi...    36   0.091  2
(AM061577) Brassica oleracea var. alboglabra EST, clone  AAF...    36   0.091  2
(EE501583) EX20LIB9_UP_055_F08_15FEB2005_054 Brassica napus ...    36   0.092  2
(ES926045) 25RDBNM_UP_104_B06_05MAR2006_046 Brassica napus 2...    36   0.092  2
(EE438443) 64ETCOT5_T3_015_F02_30JAN2005_006 Brassica napus ...    36   0.092  2
(EE500636) EX20LIB9_UP_039_B12_22FEB2005_094 Brassica napus ...    36   0.092  2
(EE500505) EX20LIB9_UP_036_H09_22FEB2005_065 Brassica napus ...    36   0.092  2
(EE498718) EX20LIB9_UP_004_E06_01NOV2004_040 Brassica napus ...    36   0.092  2
(EE436189) 5ETGS9H_UP_010_H08_04FEB2005_050 Brassica napus 5...    36   0.093  2
(EL589058) 65JKBNM0_T3_028_C09_18MAR2005_075 65JKBNM0 Brassi...    36   0.093  2
(EE453218) BNBS2DCT_UP_030_G09_14MAR2005_067 Brassica napus ...    36   0.093  2
(EE448325) 75ETGS60_UP_005_E04_05MAY2005_024 75ETGS60 Brassi...    36   0.093  2
(EE500096) EX20LIB9_UP_029_G07_25FEB2005_051 Brassica napus ...    36   0.093  2
(CX189703) 72-E011240-021-006-P18-T7R ADIS-MPIZ 021 Brassica...    36   0.093  2
(CX187619) 95-E011129-021-005-N23-T7R ADIS-MPIZ 021 Brassica...    36   0.093  2
(ES963491) 9RDBNGA_UP_244_D07_10NOV2006_057 Brassica napus 9...    36   0.093  2
(ES933598) 37RDBRH_UP_099_F08_24JAN2006_054 Brassica rapa 37...    36   0.093  2
(ES903751) BNARO4GH_T3_001_E11_14NOV2006_087 Brassica napus ...    36   0.093  2
(EE526048) 37RDBRH_UP_050_A04_10JUL2004_032 Brassica rapa 37...    36   0.093  2
(CD833987) BN45.040D16F011018 BN45 Brassica napus cDNA clone...    36   0.093  2
(FG571120) BN24DYSC_UP_003_E11_8JAN2008_087 BN24DYSC Brassic...    36   0.093  2
(EV059575) BNSCS3CT_UP_286_F11_01JUN2007_085 Brassica napus ...    36   0.093  2
(ES998516) BNAEN3GH_UP_082_B05_14SEPT2006_045 Brassica napus...    36   0.093  2
(EE509064) 24RDBNH_UP_063_H06_01NOV2005_034 Brassica napus 2...    36   0.094  2
(ES909449) BNARO2GH_T3_001_H07_23NOV2006_049 Brassica napus ...    36   0.094  2
(CN737769) 26RDBNT_UP_030_F12_23JAN2004_086 Brassica napus 2...    36   0.094  2
(EE425041) 31ETGS12_UP_019_A12_07FEB2005_096 Brassica napus ...    36   0.094  2
(EE414436) 56ACAC48_UP_030_E05_20DEC2004_039 Brassica napus ...    36   0.094  2
(ES909759) BNARO2GH_T7_002_H07_23NOV2006_049 Brassica napus ...    36   0.095  2
(EE457869) BNBS6DCT_UP_027_B11_14APR2005_093 Brassica napus ...    36   0.095  2
(CX191808) 49-E010621-021-003-A13-T7R ADIS-MPIZ 021 Brassica...    36   0.095  2
(CD822926) BN25.047B11F020109 BN25 Brassica napus cDNA clone...    36   0.095  2
(CN736672) 26RDBNT_UP_018_C12_21JAN2004_092 Brassica napus 2...    36   0.095  2
(EE415987) 57ACPE6_UP_019_A02_14SEP2004_016 Brassica napus D...    36   0.095  2
(DY025195) 53COT2_T3_013_C06_03SEP2004_044 Brassica napus 36...    36   0.095  2
(EV006881) BNAEN3GH_UP_207_G11_28NOV2006_083 Brassica napus ...    36   0.095  2
(EV003682) BNAEN3GH_UP_134_H11_1ONOV2006_081 Brassica napus ...    36   0.095  2
(EL589198) 65JKBNM0_T3_029_H11_18MAR2005_081 65JKBNM0 Brassi...    36   0.096  2
(CX188025) 91-E010531-021-002-F23-T7R ADIS-MPIZ 021 Brassica...    36   0.096  2
(EE405607) 17ACDHMS_UP_023_B08_28OCT2004_062 Brassica napus ...    36   0.096  2
(CN829471) EL3518F Brassica embryo library (EL) Brassica nap...    36   0.096  2
(DY003530) 54ACDHPE_UP_028_B12_09NOV2004_094 Brassica napus ...    36   0.096  2
(EV041707) BNSCS3CT_UP_065_F05_05MAY2007_037 Brassica napus ...    36   0.097  2
(ES961052) 9RDBNGA_UP_211_C11_25SEPT2006_091 Brassica napus ...    36   0.097  2
(DY029567) 47RDOAH_UP_043_B09_20AUG2004_077 O. Alba 47RDOAH ...    36   0.097  2
(ES913801) BNARO2GH_T3_028_H05_15DEC2006_033 Brassica napus ...    36   0.097  2
(EE511892) 25RDBNM_UP_056_A12_02NOV2005_096 Brassica napus 2...    36   0.097  2
(DY021711) 63JKCOT5_T3_021_F10_22JAN2005_070 63JKCOT5 Brassi...    36   0.097  2
(CX279147) 21ACACMS_UP_004_H05_09MAR2004_033 Brassica napus ...    36   0.097  2
(EE507381) 24RDBNH_UP_044_C12_28FEB2004_092 Brassica napus 2...    36   0.098  2
(EE414285) 56ACAC48_UP_028_F12_16DEC2004_086 Brassica napus ...    36   0.098  2
(EV040355) BNSCS3CT_UP_048_G10_04MAY2007_068 Brassica napus ...    36   0.098  2
(EE529054) 39RDBRT_UP_054_C12_30NOV2005_092 Brassica rapa 39...    36   0.098  2
(CN733438) 25RDBNM_UP_012_B08_15JAN2004_062 Brassica napus 2...    36   0.098  2
(EE402162) 15ACDHYS_UP_027_B02_15OCT2004_014 Brassica napus ...    36   0.099  2
(CN735564) 26RDBNT_UP_006_B11_20JAN2004_093 Brassica napus 2...    36   0.099  2
(EE429565) 34ETGS48_UP_006_B11_14MAR2004_093 Brassica napus ...    36   0.099  2
(EE526176) 37RDBRH_UP_052_A04_05DEC2005_032 Brassica rapa 37...    36   0.099  2
(EE423253) 60ACAB48_UP_013_F10_30SEP2004_070 Brassica napus ...    36   0.099  2
(AM057914) Brassica oleracea var. alboglabra EST, clone  AAF...    36   0.100  2
(EE402845) 16ACDHDS_UP_015_E11_15OCT2004_087 Brassica napus ...    36   0.100  2
(ES909491) BNARO2GH_T3_006_D04_15DEC2006_026 Brassica napus ...    36   0.100  2
(EE469876) BNSCS4CT_UP_029_F11_19JAN2005_085 Brassica napus ...    36   0.100  2
(CX272560) 39RDBRT_UP_042_B11_21JUL2004_093 Brassica rapa 39...    36   0.10   2
(EV086685) BNSCS5CT_UP_125_C02_29MAY2007_012 Brassica napus ...    36   0.10   2
(EV046718) BNSCS3CT_UP_127_E05_09MAY2007_039 Brassica napus ...    36   0.10   2
(ES920525) 24RDBNH_UP_156_E01_13DEC2006_007 Brassica napus 2...    36   0.10   2
(CN829472) EL3518R Brassica embryo library (EL) Brassica nap...    36   0.10   2
(EL592580) 65JKBNMO_UP_072_D12_17JUL2006_090 65JKBNM0 Brassi...    36   0.10   2
(ES990031) BNAEN1GH_UP_050_C05_21JUL2006_043 Brassica napus ...    36   0.10   2
(EV020600) BNSCS2CT_UP_065_H01_18APR2007_001 Brassica napus ...    36   0.10   2
(EV063068) BNSCS4CT_UP_062_F05_18MAY2007_037 Brassica napus ...    36   0.10   2
(DY003016) 54ACDHPE_UP_022_C08_11NOV2004_060 Brassica napus ...    36   0.10   2
(EV042625) BNSCS3CT_UP_077_G10_04MAY2007_068 Brassica napus ...    36   0.10   2
(EE405113) 17ACDHMS_UP_017_F07_27OCT2004_053 Brassica napus ...    36   0.10   2
(EV047018) BNSCS3CT_UP_131_B01_09MAY2007_013 Brassica napus ...    36   0.10   2
(EV066479) BNSCS4CT_UP_105_E03_18MAY2007_023 Brassica napus ...    36   0.11   2
(EE430327) 34ETGS48_UP_014_H02_11FEB2005_002 Brassica napus ...    36   0.11   2
(EV013455) BNSCS1CT_UP_038_A10_24MAR2007_080 Brassica napus ...    36   0.11   2
(EE529279) 39RDBRT_UP_057_F03_30NOV2005_021 Brassica rapa 39...    36   0.11   2
(CD817148) BN20.040O06F011025 BN20 Brassica napus cDNA clone...    36   0.11   2
(EE513864) 26RDBNT_UP_043_C06_16FEB2004_044 Brassica napus 2...    36   0.11   2
(EE465601) BNSCS3CT_UP_008_G12_08JAN2005_084 Brassica napus ...    36   0.11   2
(EE447182) 74ETGS48_UP_011_B10_27APR2005_078 74ETGS48 Brassi...    36   0.11   2
(EE524944) 37RDBRH_UP_035_E12_07JUL2004_088 Brassica rapa 37...    36   0.11   2
(CN735711) 26RDBNT_UP_007_G05_20JAN2004_035 Brassica napus 2...    36   0.11   2
(EE540088) 61RDBNCM_UP_052_F03_07NOV2005_021 Brassica napus ...    36   0.11   2
(EE507743) 24RDBNH_UP_048_C06_28FEB2004_044 Brassica napus 2...    36   0.11   2
(EV063263) BNSCS4CT_UP_065_A06_18MAY2007_048 Brassica napus ...    36   0.11   2
(EE427799) 33ETGS36_UP_004_C10_15MAR2004_076 Brassica napus ...    36   0.12   2
(EE425290) 31ETGS12_UP_021_G12_07FEB2005_084 Brassica napus ...    36   0.12   2
(EV127698) 0196525 Brassica napus Stem library Brassica napu...    36   0.12   2
(EV128025) 0197293 Brassica napus Stem library Brassica napu...    36   0.12   2
(EV127861) 0196925 Brassica napus Stem library Brassica napu...    36   0.12   2
(EV196973) 0098126 Brassica napus Cold acclimation - light B...    36   0.13   2
(ES910999) BNARO6GH_T3_025_A11_07DEC2006_095 Brassica napus ...    36   0.14   2
(EX759702) RR2C337JQ RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(EX755677) RR2C337TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(EX908476) RS3CA39JQ RS3(RT) Raphanus sativus cDNA 3', mRNA ...    36   0.23   2
(EX906874) RS3BM94JQ RS3(RT) Raphanus sativus cDNA 3', mRNA ...    36   0.23   2
(EX902654) RS3BM94TFB RS3(RT) Raphanus sativus cDNA 5', mRNA...    36   0.23   2
(EX904604) RS3CA39TF RS3(RT) Raphanus sativus cDNA 5', mRNA ...    36   0.23   2
(EX892387) RS1C548JQ RS1(AR) Raphanus sativus var. oleiformi...    36   0.23   2
(EX888460) RS1C548TF RS1(AR) Raphanus sativus var. oleiformi...    36   0.23   2
(EW727511) RS2A383JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ...    36   0.23   2
(EW727207) RS2A383TR RS2(RS) Raphanus sativus cDNA 3', mRNA ...    36   0.23   2
(EW722756) RS2A383TV RS2(RS) Raphanus sativus cDNA 5', mRNA ...    36   0.23   2
(EW722755) RS2A383TF RS2(RS) Raphanus sativus cDNA 5', mRNA ...    36   0.23   2
(EY903448) RR2DW96JQ RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(EX747123) RR1BW72TF RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.23   2
(EX753499) RR1CS55JQ RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.23   2
(EX749921) RR1CS55TF RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.23   2
(EY907538) RR2DW96TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(EX751396) RR1BW72JQ RR1(CS) Raphanus raphanistrum subsp. ma...    36   0.23   2
(ES904590) BNARO4GH_T3_020_G06_24NOV2006_036 Brassica napus ...    36   0.23   2
(FD552325) RR3FV60TF RR3(NY) Raphanus raphanistrum subsp. ra...    36   0.23   2
(EX758150) RR2CW45TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(EX754106) RR2BL58TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(EX901702) RS2D232JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ...    36   0.23   2
(EX898068) RS2D232TF RS2(RS) Raphanus sativus cDNA 5', mRNA ...    36   0.23   2
(EE567011) BNZB_UP_141_H08_27SEP2005_050 Brassica napus BNZB...    36   0.23   2
(ES996259) BNAEN3GH_UP_050_C04_01SEP2006_028 Brassica napus ...    36   0.23   2
(ES933865) 37RDBRH_UP_103_H01_24JAN2006_001 Brassica rapa 37...    36   0.23   2
(FD982458) RR4FW35JQ RR4(PB) Raphanus raphanistrum subsp. la...    36   0.23   2
(FD544079) RR2FS66TF RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(ES924932) 25RDBNM_UP_091_F06_05MAR2006_038 Brassica napus 2...    36   0.23   2
(EE401713) 15ACDHYS_UP_021_G07_14OCT2004_051 Brassica napus ...    36   0.23   2
(FD986164) RR4FW35TF RR4(PB) Raphanus raphanistrum subsp. la...    36   0.23   2
(CX281031) 51ETGS4H_RP_006_C08_07SEP2004_060 Germinating see...    36   0.23   2
(T25193) EST078 ATR-4H Raphanus sativus cDNA clone ATR078 5'...    36   0.23   2
(T25176) EST040 ATR-4H Raphanus sativus cDNA clone ATR040 5'...    36   0.23   2
(EX761569) RR2CW45JQ RR2(MS) Raphanus raphanistrum subsp. ra...    36   0.23   2
(ES995930) BNAEN3GH_UP_045_A12_01SEP2006_096 Brassica napus ...    36   0.23   2
(EX908772) RS3CE69JQ RS3(RT) Raphanus sativus cDNA 3', mRNA ...    36   0.23   2
(EE559096) BNZB_UP_039_H02_07MAY2004_002 Brassica napus BNZB...    36   0.24   2
(T25199) EST084sp6 ATR-4H Raphanus sativus cDNA clone ATR084...    36   0.24   2
(ES957869) 9RDBNGA_UP_171_B03_11MAR2006_029 Brassica napus 9...    36   0.24   2
(ES958424) 9RDBNGA_UP_179_A12_11MAR2006_096 Brassica napus 9...    36   0.24   2
(ES993428) BNAEN3GH_UP_010_G10_31MAY2006_068 Brassica napus ...    36   0.24   2
(ES962962) 9RDBNGA_UP_237_A05_08NOV2006_047 Brassica napus 9...    36   0.24   2
(CA860436) EST634930 GVSP Glomus versiforme cDNA clone pGVSP...    48   0.30   1
(CA859767) EST634261 GVSP Glomus versiforme cDNA clone pGVSP...    48   0.30   1
(CA859505) EST633999 GVSP Glomus versiforme cDNA clone pGVSP...    48   0.30   1
(CA859342) EST633836 GVSP Glomus versiforme cDNA clone pGVSP...    48   0.30   1
(CA859340) EST633834 GVSP Glomus versiforme cDNA clone pGVSP...    48   0.30   1
(EE674410) EST1513 Mycelia Grown in Nitrogen Limited Media C...    40   0.31   2
(EE500710) EX20LIB9_UP_040_E11_22FEB2005_087 Brassica napus ...    36   0.35   2
(EC760297) PSE00002896 rw_mgpallid Polysphondylium pallidum ...    34   0.71   2
(EC761286) PSE00000062 rw_mgpallid Polysphondylium pallidum ...    34   0.82   2
(EE478433) BNYS6DCT_UP_004_D11_02MAY2004_089 Brassica napus ...    36   1.00   2
(ES319465) AmisEST003913 Juvenile American Alligator Liver L...    42   1.1    2
(CA270437) SCQSLB2054H12.g LB2 Saccharum officinarum cDNA cl...    46   1.2    1
(DY889946) CeleSEQ6939 Cunninghamella elegans pBluescript (E...    34   1.3    2
(BZ511776) BOMSB62TR BO_2_3_KB Brassica oleracea genomic clo...    38   1.5    2
(EX045092) BR029736 floral bud cDNA library KBFL Brassica ra...    36   1.6    2
(ER556343) 1093016353918 Global-Ocean-Sampling_GS-35-01-01-1...    42   2.0    2
(EE477691) BNYS4DCT_UP_025_G06_21MAR2005_036 Brassica napus ...    32   3.2    2
(EU830206) Linum usitatissimum clone LU0007C03 mRNA sequence.      36   4.6    2
(CR925820) Zebrafish DNA sequence from clone CH211-22E9 in l...    44   4.7    1
(AL929291) Zebrafish DNA sequence from clone CH211-189P10 in...    44   4.7    1
(BC076622) Mus musculus PRP39 pre-mRNA processing factor 39 ...    44   4.7    1
(BC030904) Mus musculus PRP39 pre-mRNA processing factor 39 ...    44   4.7    1
(BC029153) Mus musculus PRP39 pre-mRNA processing factor 39 ...    44   4.7    1
(BC014689) Mus musculus PRP39 pre-mRNA processing factor 39 ...    44   4.7    1
(AC159621) Mus musculus BAC clone RP24-342I9 from chromosome...    44   4.7    1
(AP008001) Lotus japonicus genomic DNA, chromosome 5, clone:...    44   4.7    1
(BC034078) Mus musculus PRP39 pre-mRNA processing factor 39 ...    44   4.7    1
(BC033575) Mus musculus PRP39 pre-mRNA processing factor 39 ...    44   4.7    1
(AK168462) Mus musculus 17 days embryo kidney cDNA, RIKEN fu...    44   4.7    1
(AK154170) Mus musculus NOD-derived CD11c +ve dendritic cell...    44   4.7    1
(DH689744) Rattus norvegicus DNA, BAC clone: RNB1-246A14, 5'...    44   4.7    1
(DH653439) Rattus norvegicus DNA, BAC clone: RNB1-197E07, 5'...    44   4.7    1
(DH613821) Rattus norvegicus DNA, BAC clone: RNB1-144D10, 5'...    44   4.7    1
(ES409019) HTAB-aaa63b12.b2 Heterorhabditis_bacteriophora_HT...    44   4.7    1
(CV675636) id11h03.k1 Melton Normalized Mixed Mouse Pancreas...    44   4.7    1
(AJ517522) Dreissena polymorpha EST, clone 1mof14.                 44   4.7    1
(CF728713) UI-M-HE0-clg-c-06-0-UI.r1 NIH_BMAP_HE0 Mus muscul...    44   4.7    1
(CF582929) AGENCOURT_11363128_updated NIH_MGC_137 Mus muscul...    44   4.7    1
(CD771957) AGENCOURT_14739829 NIH_MGC_190 Mus musculus cDNA ...    44   4.7    1
(CB237309) AGENCOURT_11476318 NIH_MGC_166 Mus musculus cDNA ...    44   4.7    1
(CB232397) AGENCOURT_11446362 NIH_MGC_166 Mus musculus cDNA ...    44   4.7    1
(AI465827) vw48g09.y1 Soares_mammary_gland_NbMMG Mus musculu...    44   4.7    1
(BY368343) Mus musculus 6 days neonate spleen cDNA, RIKEN fu...    44   4.7    1
(BY367598) Mus musculus 6 days neonate spleen cDNA, RIKEN fu...    44   4.7    1
(BU505061) AGENCOURT_10015919 NIH_MGC_94 Mus musculus cDNA c...    44   4.7    1
(BQ828580) LL6in20510 AFT024-subtracted library Mus musculus...    44   4.7    1
(BI900353) id11h03.y1 Melton Normalized Mixed Mouse Pancreas...    44   4.7    1
(BI900322) id11e04.y1 Melton Normalized Mixed Mouse Pancreas...    44   4.7    1
(BI900283) id11a04.y1 Melton Normalized Mixed Mouse Pancreas...    44   4.7    1
(AA839376) vw48g09.r1 Soares_mammary_gland_NbMMG Mus musculu...    44   4.7    1
(BF016128) uy31c09.y1 NCI_CGAP_Lu30 Mus musculus cDNA clone ...    44   4.7    1
(BB745643) Mus musculus adult male kidney cDNA, RIKEN full-l...    44   4.7    1
(BB745276) Mus musculus adult male kidney cDNA, RIKEN full-l...    44   4.7    1
(BB741099) Mus musculus 6 days neonate spleen cDNA, RIKEN fu...    44   4.7    1
(BB740816) Mus musculus 6 days neonate spleen cDNA, RIKEN fu...    44   4.7    1
(BB737515) Mus musculus 6 days neonate spleen cDNA, RIKEN fu...    44   4.7    1
(BB737309) Mus musculus 6 days neonate spleen cDNA, RIKEN fu...    44   4.7    1
(BB460975) Mus musculus 12 days embryo spinal ganglion cDNA,...    44   4.7    1
(BB396440) Mus musculus 0 day neonate cerebellum cDNA, RIKEN...    44   4.7    1
(BB241584) Mus musculus 3 days neonate thymus cDNA, RIKEN fu...    44   4.7    1
(BB182006) Mus musculus adult male hypothalamus cDNA, RIKEN ...    44   4.7    1

>(BJ425437) Dictyostelium discoideum cDNA clone:ddv55o17, 5' end,
           single read.
          Length = 477

 Score =  648 bits (327), Expect(2) = 0.0
 Identities = 327/327 (100%)
 Strand = Plus / Plus


Query: 1   aattttttcgcttaatcgtatatctgcacacatatagaaaaaatggttcaaagacttacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aattttttcgcttaatcgtatatctgcacacatatagaaaaaatggttcaaagacttacc 60


Query: 61  tacagaagaagattatcttaccgtactacttctaacgctaccaaaatcgtcaagactcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacagaagaagattatcttaccgtactacttctaacgctaccaaaatcgtcaagactcca 120


Query: 121 ggtggtagattagtataccaatacatcggtaaaactggtaaagttccaagatgtggtgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtggtagattagtataccaatacatcggtaaaactggtaaagttccaagatgtggtgaa 180


Query: 181 tgtggtgtcaacttagccggtatcccagccttaagaccataccaatacaaaaatcttcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtggtgtcaacttagccggtatcccagccttaagaccataccaatacaaaaatcttcca 240


Query: 241 aaatcaagaagaactgtttcacgtgcttatggtggtagcaaatgtgccaaatgtgtccgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatcaagaagaactgtttcacgtgcttatggtggtagcaaatgtgccaaatgtgtccgt 300


Query: 301 aacagaatcgttcgtgctttcttaatt 327
           |||||||||||||||||||||||||||
Sbjct: 301 aacagaatcgttcgtgctttcttaatt 327

 Score = 91.7 bits (46), Expect(2) = 0.0
 Identities = 46/46 (100%)
 Strand = Plus / Plus


Query: 400 tcatccaaataaatgtagtgattaatatcaatcattttttacttat 445
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcatccaaataaatgtagtgattaatatcaatcattttttacttat 445

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 395,260,354
Number of extensions: 21472336
Number of successful extensions: 1470484
Number of sequences better than 10.0: 450
Length of query: 488
Length of database: 98,766,808,389
Length adjustment: 23
Effective length of query: 465
Effective length of database: 96,507,600,660
Effective search space: 44876034306900
Effective search space used: 44876034306900
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.16
Homology vs Protein 
Query= Contig-U15494-1 (Contig-U15494-1Q) /CSM_Contig/Contig-U15494-1Q.Seq.d
         (488 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY857448_1(AY857448|pid:none) Suberites domuncula L34 mRNA, comp...   119   3e-26
CU633900_1002(CU633900|pid:none) Podospora anserina genomic DNA ...   116   3e-25
AP007159_572(AP007159|pid:none) Aspergillus oryzae RIB40 genomic...   116   3e-25
AM920433_411(AM920433|pid:none) Penicillium chrysogenum Wisconsi...   115   5e-25
AM270139_3(AM270139|pid:none) Aspergillus niger contig An07c0220...   115   7e-25
AF378548_1(AF378548|pid:none) Ophiostoma novo-ulmi clone 10 ribo...   114   1e-24
EU810310_1(EU810310|pid:none) Gymnochlora stellata 60S ribosomal...   110   2e-23
CR382136_623(CR382136|pid:none) Debaryomyces hansenii strain CBS...   109   4e-23
CR382129_184(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...   109   4e-23
CR380959_541(CR380959|pid:none) Candida glabrata strain CBS138 c...   108   7e-23
EF633958_1(EF633958|pid:none) Ornithodoros parkeri clone OP-77 6...   107   1e-22
(P40525) RecName: Full=60S ribosomal protein L34-B;  &S48427(S48...   107   1e-22
EU124982_1(EU124982|pid:none) Arenicola marina ribosomal protein...   107   2e-22
CR940352_468(CR940352|pid:none) Theileria annulata strain Ankara...   105   4e-22
AY072290_1(AY072290|pid:none) Spodoptera frugiperda ribosomal pr...   104   1e-21
AY769303_1(AY769303|pid:none) Bombyx mori ribosomal protein L34 ...   104   1e-21
FN392319_1013(FN392319|pid:none) Pichia pastoris GS115 chromosom...   103   3e-21
AY071577_1(AY071577|pid:none) Drosophila melanogaster RE63456 fu...   102   4e-21
AY168761_1(AY168761|pid:none) Branchiostoma belcheri tsingtaunes...   101   1e-20
AE014297_4082(AE014297|pid:none) Drosophila melanogaster chromos...   100   1e-20
EU603270_1(EU603270|pid:none) Ceratitis capitata ribosomal prote...   100   2e-20
EU558377_1(EU558377|pid:none) Phoronis muelleri putative 60S rib...   100   3e-20
CR382123_360(CR382123|pid:none) Kluyveromyces lactis strain NRRL...   100   3e-20
EU139231_1(EU139231|pid:none) Flustra foliacea putative 60S ribo...    99   4e-20
EU958413_1(EU958413|pid:none) Zea mays clone 1689686 60S ribosom...    99   5e-20
(Q90YT5) RecName: Full=60S ribosomal protein L34;  &AF401588_1(A...    99   5e-20
EF634776_1(EF634776|pid:none) Pristionchus sp. 15 RS5229 large s...    99   7e-20
AY961558_1(AY961558|pid:none) Lysiphlebus testaceipes ribosomal ...    98   9e-20
FN321665_1(FN321665|pid:none) Schistosoma japonicum isolate Anhu...    98   9e-20
FN321661_1(FN321661|pid:none) Schistosoma japonicum isolate Anhu...    98   9e-20
BT041960_1(BT041960|pid:none) Zea mays full-length cDNA clone ZM...    98   9e-20
AM049116_1(AM049116|pid:none) Timarcha balearica mRNA for riboso...    98   9e-20
AB374972_1(AB374972|pid:none) Solea senegalensis RPL34 mRNA for ...    97   2e-19
AY894073_1(AY894073|pid:none) Synthetic construct Homo sapiens c...    97   3e-19
BC077039_1(BC077039|pid:none) Xenopus tropicalis ribosomal prote...    97   3e-19
EF541360_1(EF541360|pid:none) Lygus lineolaris clone E67 ribosom...    97   3e-19
(P49207) RecName: Full=60S ribosomal protein L34;  &AB061832_1(A...    97   3e-19
AY079177_1(AY079177|pid:none) Xenopus laevis ribosomal protein L...    97   3e-19
AY533224_1(AY533224|pid:none) Chinchilla lanigera ribosomal prot...    96   3e-19
DQ213777_1(DQ213777|pid:none) Taeniopygia guttata clone 0061P001...    96   3e-19
AY961493_1(AY961493|pid:none) Lysiphlebus testaceipes ribosomal ...    96   3e-19
AP005159_8(AP005159|pid:none) Oryza sativa Japonica Group genomi...    96   4e-19
AK103424_1(AK103424|pid:none) Oryza sativa Japonica Group cDNA c...    96   4e-19
BT043734_1(BT043734|pid:none) Salmo salar clone HM6_0427 ribosom...    96   4e-19
BT058335_1(BT058335|pid:none) Salmo salar clone Contig4012 60S r...    96   4e-19
FN357448_27(FN357448|pid:none) Schistosoma mansoni genome sequen...    96   4e-19
EF634762_1(EF634762|pid:none) Pristionchus entomophagus large su...    96   6e-19
EF634761_1(EF634761|pid:none) Pristionchus lheritieri large subu...    96   6e-19
BC099259_1(BC099259|pid:none) Xenopus laevis ribosomal protein L...    95   8e-19
EF634759_1(EF634759|pid:none) Pristionchus pacificus large subun...    95   8e-19
EF634766_1(EF634766|pid:none) Pristionchus aerivorus large subun...    95   8e-19
CU928165_166(CU928165|pid:none) Kluyveromyces thermotolerans str...    95   1e-18
EF634764_1(EF634764|pid:none) Pristionchus sp. 3 CZ3975 large su...    95   1e-18
AY846826_1(AY846826|pid:none) Triticum aestivum ribosomal protei...    95   1e-18
BT036294_1(BT036294|pid:none) Zea mays full-length cDNA clone ZM...    95   1e-18
EF634760_1(EF634760|pid:none) Pristionchus maupasi large subunit...    95   1e-18
I68524(I68524) ribosomal protein L34 - human  &L38941_1(L38941|p...    95   1e-18
DQ440044_1(DQ440044|pid:none) Aedes aegypti clone AE-288 60S rib...    94   1e-18
DQ413227_1(DQ413227|pid:none) Acyrthosiphon pisum isolate WHAP03...    94   1e-18
(P45842) RecName: Full=60S ribosomal protein L34; AltName: Full=...    94   2e-18
(Q9NB34) RecName: Full=60S ribosomal protein L34;  &AF271207_1(A...    94   2e-18
EU976530_1(EU976530|pid:none) Zea mays clone 896857 60S ribosoma...    94   2e-18
EU961380_1(EU961380|pid:none) Zea mays clone 234960 60S ribosoma...    94   2e-18
AC148762_14(AC148762|pid:none) Medicago truncatula clone mth2-15...    93   3e-18
BT070992_1(BT070992|pid:none) Picea sitchensis clone WS02763_M17...    93   3e-18
BT050641_1(BT050641|pid:none) Medicago truncatula clone MTYF1_F2...    93   3e-18
AM478818_1(AM478818|pid:none) Vitis vinifera contig VV79X003453....    93   3e-18
EU972976_1(EU972976|pid:none) Zea mays clone 391038 60S ribosoma...    93   4e-18
X14401_1(X14401|pid:none) R.rattus mRNA for ribosomal protein L34.     93   4e-18
EF634777_1(EF634777|pid:none) Koerneria sp. RS1982 large subunit...    92   6e-18
EU952523_1(EU952523|pid:none) Zea mays clone 1282288 60S ribosom...    92   6e-18
AF043695_3(AF043695|pid:none) Caenorhabditis elegans cosmid C42C...    92   8e-18
EF144524_1(EF144524|pid:none) Populus trichocarpa clone PX0019_P...    91   1e-17
EF146328_1(EF146328|pid:none) Populus trichocarpa clone WS0117_D...    91   1e-17
(P41098) RecName: Full=60S ribosomal protein L34;  &L27089_1(L27...    91   2e-17
AM910983_88(AM910983|pid:none) Plasmodium knowlesi strain H chro...    90   2e-17
AY174764_1(AY174764|pid:none) Orobanche cumana 60S ribosomal pro...    88   9e-17
(Q9LJW6) RecName: Full=60S ribosomal protein L34-3;  &AP000386_7...    88   9e-17
AL844506_109(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    87   3e-16
AM849535_1(AM849535|pid:none) Pomphorhynchus laevis partial mRNA...    84   2e-15
BT078581_1(BT078581|pid:none) Lepeophtheirus salmonis Pacific fo...    82   5e-15
BT080248_1(BT080248|pid:none) Caligus clemensi clone ccle-evs-50...    81   1e-14
BT075898_1(BT075898|pid:none) Caligus rogercresseyi clone crog-e...    79   4e-14
AY548905_2(AY548905|pid:none) Antonospora locustae DIS3 protein-...    79   6e-14
AY909414_1(AY909414|pid:none) Siniperca chuatsi clone C46 60S ri...    76   5e-13
(Q29223) RecName: Full=60S ribosomal protein L34;                      74   2e-12
U97397_1(U97397|pid:none) Schizosaccharomyces pombe unknown prot...    70   3e-11
FN315809_1(FN315809|pid:none) Schistosoma japonicum isolate Anhu...    65   6e-10
AY730338_9(AY730338|pid:none) Solanum tuberosum strain P6/210 cl...    64   1e-09
FJ362597_1(FJ362597|pid:none) Vernicia fordii 60S ribosomal prot...    64   2e-09
(Q1WBV0) RecName: Full=60S ribosomal protein L34;  &DQ407504_1(D...    63   3e-09
AY762981_1(AY762981|pid:none) Homo sapiens leukemia-associated p...    62   7e-09
(P11250) RecName: Full=60S ribosomal protein L34;  &R5RT34(S0427...    61   2e-08
BT038052_1(BT038052|pid:none) Zea mays full-length cDNA clone ZM...    60   3e-08
(O26137) RecName: Full=50S ribosomal protein L34e;  &AE000666_29...    59   5e-08
CP000742_1479(CP000742|pid:none) Methanococcus vannielii SB, com...    59   6e-08
CP001140_1147(CP001140|pid:none) Desulfurococcus kamchatkensis 1...    59   8e-08
AM494972_398(AM494972|pid:none) Leishmania braziliensis chromoso...    54   2e-06
AM494955_142(AM494955|pid:none) Leishmania braziliensis chromoso...    54   2e-06
(A3DND2) RecName: Full=50S ribosomal protein L34e;  &CP000575_10...    54   3e-06
(Q5JJF7) RecName: Full=50S ribosomal protein L34e;  &AP006878_15...    53   3e-06
CP000102_850(CP000102|pid:none) Methanosphaera stadtmanae DSM 30...    53   3e-06
CP000816_1189(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, c...    53   3e-06
CP001398_1977(CP001398|pid:none) Thermococcus gammatolerans EJ3,...    53   4e-06
CR954204_435(CR954204|pid:none) Ostreococcus tauri strain OTTH05...    53   4e-06
AE017199_289(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co...    52   6e-06
BA000002_688(BA000002|pid:none) Aeropyrum pernix K1 DNA, complet...    52   7e-06
(O74006) RecName: Full=50S ribosomal protein L34e;                     52   1e-05
CP000867_259(CP000867|pid:none) Methanococcus maripaludis C6, co...    51   2e-05
CP000505_621(CP000505|pid:none) Thermofilum pendens Hrk 5, compl...    50   3e-05
AP008215_617(AP008215|pid:none) Oryza sativa (japonica cultivar-...    48   1e-04
EU116870_1(EU116870|pid:none) Sipunculus nudus putative ribosoma...    46   5e-04
(O05981) RecName: Full=50S ribosomal protein L34e;  &CP000077_53...    42   0.006
EU441821_1(EU441821|pid:none) Xenopus borealis clone RPL34.a rib...    40   0.038
(A3MV68) RecName: Full=50S ribosomal protein L34e;  &CP000561_10...    37   0.24
EU999598_1(EU999598|pid:none) Pinus sylvestris isolate Poland_25...    37   0.32
AB007181_1(AB007181|pid:none) Homo sapiens gene for ribosomal pr...    37   0.32
CP000852_1296(CP000852|pid:none) Caldivirga maquilingensis IC-16...    35   0.93
(Q975K6) RecName: Full=50S ribosomal protein L34e;  &BA000023_45...    35   1.2
(Q8ZTJ2) RecName: Full=50S ribosomal protein L34e;  &AE009441_22...    33   3.5
CP000384_3672(CP000384|pid:none) Mycobacterium sp. MCS, complete...    33   4.6
CP000504_392(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,...    33   4.6
CP001323_618(CP001323|pid:none) Micromonas sp. RCC299 chromosome...    32   7.8

>AY857448_1(AY857448|pid:none) Suberites domuncula L34 mRNA,
           complete cds.
          Length = 112

 Score =  119 bits (299), Expect = 3e-26
 Identities = 53/82 (64%), Positives = 67/82 (81%)
 Frame = +1

Query: 94  NATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYKNLPKSRRTVSRAYG 273
           N T++ KTPGGRLVY YI K G VPRCG+C   L+G+PA+RP + KNL K ++TVSRAYG
Sbjct: 18  NRTRVSKTPGGRLVYLYIKKRGSVPRCGDCKTKLSGLPAVRPIKLKNLSKPKKTVSRAYG 77

Query: 274 GSKCAKCVRNRIVRAFLIEEQK 339
           G++C +C+R RI+RAFLIEEQK
Sbjct: 78  GARCHQCLRQRIIRAFLIEEQK 99

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 680,591,331
Number of extensions: 13135942
Number of successful extensions: 33088
Number of sequences better than 10.0: 123
Number of HSP's gapped: 33035
Number of HSP's successfully gapped: 123
Length of query: 162
Length of database: 1,051,180,864
Length adjustment: 118
Effective length of query: 44
Effective length of database: 669,266,902
Effective search space: 29447743688
Effective search space used: 29447743688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.55  gvh: 0.25  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.45  mip: 0.17
 nuc: 0.24  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.50  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 80.0 %: cytoplasmic
	 20.0 %: mitochondrial

>> prediction for Contig-U15494-1 is cyt
VS (DIR, S) 44
VH (FL, L) 4
VF (FL, S) 7
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 6
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 6
FC-IC (SUB) 4