Contig-U15461-1
Contig ID Contig-U15461-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15461-1 (Contig-U15461-1Q) /CSM_Contig/Contig-U15461-1Q.Seq.d
CGCGTCCGATTTTTCAACACACAGACACACAAAATGGGTATTTCTCGTGA
CGCTCTCCACAAACATAGACTTACAGGTGCTGCCCGTAAATGTAACTACA
AAAAGAGAAAGTATGAGTTAGGTAGACAAGCTGCCAAAACAAAGATTTGC
TCTCAAGGTGAAGAAAAGCGTGTTAGATCAATCAGAGTTCGTGGTGGTCA
CCAAAAATTCAGAGCCTTAAGACTCGATACTGGTAATTTCTCATGGGCCA
CCGAAAAGATCACCCGTAAATGTCGTATCCTTAACGTCGTTTACAATGCC
ACCTCTAACGATTTAGTCCGTACCAATACCCTCGTTAAAGGTTCAATCGT
CCAAATTGATGCCACCCCATACAAACAATGGTATGAAACTCACTACGGTG
TTGTTGTTGGTAAAAAGAAATCCGCCAAAAAGGACGGTGAAGCTGAACAA
GTTGTCAAGAAATCCGCTTCTCTCCTTGCCAAACTTGCCTCAAGAGCTAA
GGGTAGAGTTTTAGATTCAGCCATCGAATCACAAATCGGTGAAGGTCGTT
TCTTTGCTCGTATCACCTCAAGACCAGGTCAAGTCGGTAAATGTGATGAA
TGTGATGGTTACATCTTAGAAGCTAAGGAATTAGAATTCTACCAAAGAAG
ACTCCAAAAGAAGAAATCTGCCAAATAAACATACAGATTATTTTATTCAT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 744
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 833598
End point 834313
Strand (PLUS/MINUS) PLUS
Number of clones 26
Number of EST 29
Link to clone list U15461
List of clone(s)

est1=VSF696E,1,698
est2=VFE689E,16,681
est3=VSI445E,18,682
est4=SSF869E,20,702
est5=VFI331Z,20,698
est6=FC-BF17F,23,611
est7=VSH796Z,27,682
est8=SLI851E,28,708
est9=VSG786F,28,541
est10=VSH463E,28,681
est11=VSH796F,28,522
est12=VSI495E,28,693
est13=VSI552E,28,698
est14=FC-AK23E,29,736
est15=FC-AC15E,30,701
est16=VSI837E,30,697
est17=VSJ694E,31,694
est18=VSB514Z,102,704
est19=VSB194Z,123,703
est20=VSI140F,127,705
est21=FC-BK22Z,165,703
est22=FC-BJ12Z,187,720
est23=VSI807Z,196,695
est24=VSA295Z,219,716
est25=VSA362Z,220,703
est26=VSA823Z,223,701
est27=VSI807F,233,713
est28=VSI140Z,462,676
est29=VSA210Z,524,704
Translated Amino Acid sequence
RVRFFNTQTHKMGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRS
IRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQID
ATPYKQWYETHYGVVVGKKKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIG
EGRFFARITSRPGQVGKCDECDGYILEAKELEFYQRRLQKKKSAK*tyrlfys*kkkkkk
kkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
RVRFFNTQTHKMGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRS
IRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQID
ATPYKQWYETHYGVVVGKKKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIG
EGRFFARITSRPGQVGKCDECDGYILEAKELEFYQRRLQKKKSAK*tyrlfys*kkkkkk
kkkkkkkk


Frame B:
asdfsthrhtkwvflvtlstnidlqvlpvnvttkresms*vdklpkqrfalkvkksvldq
sefvvvtknsep*dsilvishgppkrspvnvvsltsftmpplti*svpipslkvqssklm
pphtnngmklttvlllvkrnppkrtvklnklsrnpllslpnlpqelrvef*iqpsnhksv
kvvsllvspqdqvksvnvmnvmvts*klrn*nstkedskrrnlpnkhtdyfihkkkkkkk
kkkkkkk


Frame C:
rpifqhtdtqngyfs*rspqt*tyrccp*m*lqkekv*vr*tscqnkdllsr*rkac*in
qsswwspkiqslktryw*flmghrkdhp*msyp*rrlqchl*rfspyqypr*rfnrpn*c
hpiqtmv*nslrcccw*keirqkgr*s*tscqeirfspcqtclks*g*sfrfshritnr*
rsflcsyhlktrssr*m**m*wlhlrs*girilpkktpkeeicqiniqiilfikkkkkkk
kkkkkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15461-1 (Contig-U15461-1Q)
/CSM_Contig/Contig-U15461-1Q.Seq.d
(744 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15461-1 (Contig-U15461-1Q) /CSM_Contig/Conti... 1388 0.0
Contig-U14349-1 (Contig-U14349-1Q) /CSM_Contig/Conti... 34 0.29
Contig-U11259-1 (Contig-U11259-1Q) /CSM_Contig/Conti... 34 0.29
Contig-U16447-1 (Contig-U16447-1Q) /CSM_Contig/Conti... 32 1.2
Contig-U16188-1 (Contig-U16188-1Q) /CSM_Contig/Conti... 32 1.2
Contig-U13027-1 (Contig-U13027-1Q) /CSM_Contig/Conti... 32 1.2
Contig-U13021-1 (Contig-U13021-1Q) /CSM_Contig/Conti... 32 1.2
Contig-U12419-1 (Contig-U12419-1Q) /CSM_Contig/Conti... 32 1.2
Contig-U12395-1 (Contig-U12395-1Q) /CSM_Contig/Conti... 32 1.2
Contig-U11414-1 (Contig-U11414-1Q) /CSM_Contig/Conti... 32 1.2

>Contig-U15461-1 (Contig-U15461-1Q) /CSM_Contig/Contig-U15461-1Q.Seq.d
Length = 744

Score = 1388 bits (700), Expect = 0.0
Identities = 700/700 (100%)
Strand = Plus / Plus


Query: 1 cgcgtccgatttttcaacacacagacacacaaaatgggtatttctcgtgacgctctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcgtccgatttttcaacacacagacacacaaaatgggtatttctcgtgacgctctccac 60


Query: 61 aaacatagacttacaggtgctgcccgtaaatgtaactacaaaaagagaaagtatgagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacatagacttacaggtgctgcccgtaaatgtaactacaaaaagagaaagtatgagtta 120


Query: 121 ggtagacaagctgccaaaacaaagatttgctctcaaggtgaagaaaagcgtgttagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtagacaagctgccaaaacaaagatttgctctcaaggtgaagaaaagcgtgttagatca 180


Query: 181 atcagagttcgtggtggtcaccaaaaattcagagccttaagactcgatactggtaatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcagagttcgtggtggtcaccaaaaattcagagccttaagactcgatactggtaatttc 240


Query: 241 tcatgggccaccgaaaagatcacccgtaaatgtcgtatccttaacgtcgtttacaatgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatgggccaccgaaaagatcacccgtaaatgtcgtatccttaacgtcgtttacaatgcc 300


Query: 301 acctctaacgatttagtccgtaccaataccctcgttaaaggttcaatcgtccaaattgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acctctaacgatttagtccgtaccaataccctcgttaaaggttcaatcgtccaaattgat 360


Query: 361 gccaccccatacaaacaatggtatgaaactcactacggtgttgttgttggtaaaaagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccaccccatacaaacaatggtatgaaactcactacggtgttgttgttggtaaaaagaaa 420


Query: 421 tccgccaaaaaggacggtgaagctgaacaagttgtcaagaaatccgcttctctccttgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccgccaaaaaggacggtgaagctgaacaagttgtcaagaaatccgcttctctccttgcc 480


Query: 481 aaacttgcctcaagagctaagggtagagttttagattcagccatcgaatcacaaatcggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaacttgcctcaagagctaagggtagagttttagattcagccatcgaatcacaaatcggt 540


Query: 541 gaaggtcgtttctttgctcgtatcacctcaagaccaggtcaagtcggtaaatgtgatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaaggtcgtttctttgctcgtatcacctcaagaccaggtcaagtcggtaaatgtgatgaa 600


Query: 601 tgtgatggttacatcttagaagctaaggaattagaattctaccaaagaagactccaaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtgatggttacatcttagaagctaaggaattagaattctaccaaagaagactccaaaag 660


Query: 661 aagaaatctgccaaataaacatacagattattttattcat 700
||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagaaatctgccaaataaacatacagattattttattcat 700


>Contig-U14349-1 (Contig-U14349-1Q) /CSM_Contig/Contig-U14349-1Q.Seq.d
Length = 1015

Score = 34.2 bits (17), Expect = 0.29
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 681 atacagattattttatt 697
|||||||||||||||||
Sbjct: 960 atacagattattttatt 944


>Contig-U11259-1 (Contig-U11259-1Q) /CSM_Contig/Contig-U11259-1Q.Seq.d
Length = 1029

Score = 34.2 bits (17), Expect = 0.29
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 651 actccaaaagaagaaat 667
|||||||||||||||||
Sbjct: 685 actccaaaagaagaaat 701


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,006
Number of Sequences: 8402
Number of extensions: 15006
Number of successful extensions: 790
Number of sequences better than 10.0: 66
length of query: 744
length of database: 8,075,542
effective HSP length: 16
effective length of query: 728
effective length of database: 7,941,110
effective search space: 5781128080
effective search space used: 5781128080
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.27
Homology vs DNA
Query= Contig-U15461-1 (Contig-U15461-1Q) /CSM_Contig/Contig-U15461-1Q.Seq.d
(744 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ432042) Dictyostelium discoideum cDNA clone:ddv17n07, 3' ... 1144 0.0 2
(AU268706) Dictyostelium discoideum vegetative cDNA clone:VS... 1138 0.0 2
(AU284319) Dictyostelium discoideum gamete cDNA clone:FC-AK2... 1130 0.0 2
(AU269312) Dictyostelium discoideum vegetative cDNA clone:VS... 1128 0.0 3
(C23647) Dictyostelium discoideum gamete cDNA, clone FC-AC15. 1128 0.0 2
(AU270333) Dictyostelium discoideum vegetative cDNA clone:VS... 1122 0.0 2
(AU284634) Dictyostelium discoideum gamete cDNA clone:FC-BF1... 1106 0.0 2
(AU265637) Dictyostelium discoideum vegetative cDNA clone:VS... 1102 0.0 2
(C92698) Dictyostelium discoideum slug cDNA, clone SSF869. 1102 0.0 2
(AU268875) Dictyostelium discoideum vegetative cDNA clone:VS... 1061 0.0 4
(AU267489) Dictyostelium discoideum vegetative cDNA clone:VS... 1053 0.0 3
(BJ428095) Dictyostelium discoideum cDNA clone:ddv10a24, 3' ... 1019 0.0 2
(AU262062) Dictyostelium discoideum vegetative cDNA clone:VS... 987 0.0 2
(AU261883) Dictyostelium discoideum vegetative cDNA clone:VS... 946 0.0 2
(AU268214) Dictyostelium discoideum vegetative cDNA clone:VS... 938 0.0 2
(AU268707) Dictyostelium discoideum vegetative cDNA clone:VS... 918 0.0 3
(AU267989) Dictyostelium discoideum vegetative cDNA clone:VS... 785 0.0 4
(BJ445593) Dictyostelium discoideum cDNA clone:ddv60a05, 3' ... 632 0.0 3
(AU268786) Dictyostelium discoideum vegetative cDNA clone:VS... 886 0.0 2
(AU268874) Dictyostelium discoideum vegetative cDNA clone:VS... 1027 0.0 1
(AU268785) Dictyostelium discoideum vegetative cDNA clone:VS... 1023 0.0 1
(AU265638) Dictyostelium discoideum vegetative cDNA clone:VS... 848 0.0 2
(AU266813) Dictyostelium discoideum vegetative cDNA clone:VS... 1013 0.0 1
(AU267488) Dictyostelium discoideum vegetative cDNA clone:VS... 1011 0.0 1
(AU270332) Dictyostelium discoideum vegetative cDNA clone:VS... 1003 0.0 1
(AU267988) Dictyostelium discoideum vegetative cDNA clone:VS... 975 0.0 1
(AU053532) Dictyostelium discoideum slug cDNA, clone SLI851. 783 0.0 2
(AU269258) Dictyostelium discoideum vegetative cDNA clone:VS... 803 0.0 3
(AU284787) Dictyostelium discoideum gamete cDNA clone:FC-BK2... 823 0.0 2
(AU261405) Dictyostelium discoideum vegetative cDNA clone:VS... 759 0.0 2
(AU261763) Dictyostelium discoideum vegetative cDNA clone:VS... 751 0.0 2
(AU261449) Dictyostelium discoideum vegetative cDNA clone:VS... 745 0.0 2
(AU269257) Dictyostelium discoideum vegetative cDNA clone:VS... 731 0.0 2
(AU284748) Dictyostelium discoideum gamete cDNA clone:FC-BJ1... 769 0.0 4
(BJ409969) Dictyostelium discoideum cDNA clone:ddv10a24, 5' ... 793 0.0 1
(AU269311) Dictyostelium discoideum vegetative cDNA clone:VS... 777 0.0 1
(AU062274) Dictyostelium discoideum slug cDNA, clone SLI851. 531 e-146 1
(AU073072) Dictyostelium discoideum slug cDNA, clone SSF869. 476 e-130 1
(AU268215) Dictyostelium discoideum vegetative cDNA clone:VS... 276 e-111 2
(AU261353) Dictyostelium discoideum vegetative cDNA clone:VS... 202 3e-83 2
(EC761332) PSE00001357 rw_mgpallid Polysphondylium pallidum ... 101 2e-40 5
(EC760806) PSE00002911 rw_mgpallid Polysphondylium pallidum ... 101 2e-24 4
(AR550438) Sequence 5569 from patent US 6747137. 42 2e-21 6
(AU265022) Dictyostelium discoideum vegetative cDNA clone:VS... 105 5e-21 2
(AX073226) Sequence 337 from Patent WO0102550. 42 4e-20 6
(DL131139) Bax-responsive genes for drug target identificati... 42 4e-18 5
(AX536988) Sequence 589 from Patent WO02064766. 42 4e-18 5
(AR941699) Sequence 589 from patent US 7101990. 42 4e-18 5
(DB655715) Saccharomyces cerevisiae mRNA, clone: Y029_N21_F.... 48 9e-18 4
(DB661149) Saccharomyces cerevisiae mRNA, clone: Y067_M11_F.... 48 9e-18 4
(DB651089) Saccharomyces cerevisiae mRNA, clone: S03052-80_K... 48 9e-18 4
(DB658230) Saccharomyces cerevisiae mRNA, clone: Y046_A11_F.... 48 1e-17 4
(DB657820) Saccharomyces cerevisiae mRNA, clone: Y043_J12_F.... 48 1e-17 4
(DB659917) Saccharomyces cerevisiae mRNA, clone: Y057_M11_F.... 48 1e-17 4
(DB656105) Saccharomyces cerevisiae mRNA, clone: Y032_P21_F.... 48 1e-17 4
(DB655707) Saccharomyces cerevisiae mRNA, clone: Y029_M21_F.... 48 1e-17 4
(DB662180) Saccharomyces cerevisiae mRNA, clone: Y076_P17_F.... 48 1e-17 4
(DL130858) Bax-responsive genes for drug target identificati... 48 4e-17 4
(AX536426) Sequence 27 from Patent WO02064766. 48 4e-17 4
(AR941418) Sequence 27 from patent US 7101990. 48 4e-17 4
(DB652632) Saccharomyces cerevisiae mRNA, clone: Y003_N10_F.... 48 1e-16 4
(DB654795) Saccharomyces cerevisiae mRNA, clone: Y022_G17_F.... 48 1e-16 4
(DB662709) Saccharomyces cerevisiae mRNA, clone: Y080_L01_F.... 48 1e-16 4
(DB658078) Saccharomyces cerevisiae mRNA, clone: Y045_C10_F.... 48 1e-16 4
(DB663432) Saccharomyces cerevisiae mRNA, clone: Y085_M08_F.... 48 1e-16 4
(DB653559) Saccharomyces cerevisiae mRNA, clone: Y013_E01_F.... 48 1e-16 4
(DB665669) Saccharomyces cerevisiae mRNA, clone: Y100_E13_F.... 48 2e-16 4
(Z35833) S.cerevisiae chromosome II reading frame ORF YBL072c. 48 3e-16 4
(AX072968) Sequence 79 from Patent WO0102550. 48 6e-16 4
(EF058765) Synthetic construct Saccharomyces cerevisiae clon... 48 5e-15 4
(AY692824) Saccharomyces cerevisiae clone FLH158406.01X YER1... 48 5e-15 4
(DJ204794) Method for identification of useful proteins deri... 48 5e-15 4
(AX831522) Sequence 2242 from Patent WO03072602. 48 5e-15 4
(AX831520) Sequence 2240 from Patent WO03072602. 48 5e-15 4
(AX820492) Sequence 2242 from Patent EP1338608. 48 5e-15 4
(AX820490) Sequence 2240 from Patent EP1338608. 48 5e-15 4
(Z26879) S.cerevisiae genes for small subunit ribosomal prot... 48 1e-14 4
(DB641369) Saccharomyces cerevisiae mRNA, clone: S03052-18_E... 46 2e-14 4
(DB640124) Saccharomyces cerevisiae mRNA, clone: S03052-12_O... 46 3e-14 4
(DB655774) Saccharomyces cerevisiae mRNA, clone: Y030_F03_F.... 48 3e-14 3
(DB655065) Saccharomyces cerevisiae mRNA, clone: Y024_O18_F.... 48 3e-14 3
(DB658252) Saccharomyces cerevisiae mRNA, clone: Y046_B23_F.... 46 3e-14 4
(DB660120) Saccharomyces cerevisiae mRNA, clone: Y059_H21_F.... 46 4e-13 4
(U18839) Saccharomyces cerevisiae chromosome V cosmids 9747,... 48 8e-13 5
(DB659638) Saccharomyces cerevisiae mRNA, clone: Y055_P16_F.... 46 2e-11 3
(CU614625) Theobroma cacao, mRNA sequence (KZ0AAN11YI20FM1). 46 7e-11 3
(DJ129460) Method for identification of useful proteins deri... 48 6e-10 4
(FE846476) CAFI755.rev CAFI Pichia stipitis aerobic dextrose... 42 1e-09 4
(J05637) Yeast (S.cerevisiae) 70 kDa heat shock protein (SSA... 48 2e-09 3
(DJ025873) Genome-wide DNA marker of Saccharomyces cerevisiae. 48 2e-09 5
(AZ930867) 474.dhz59e04.s1 Saccharomyces unisporus NRRL Y-15... 46 2e-09 3
(DJ025870) Genome-wide DNA marker of Saccharomyces cerevisiae. 48 4e-09 4
(DB645589) Saccharomyces cerevisiae mRNA, clone: S03052-40_A... 46 1e-08 3
(AU268895) Dictyostelium discoideum vegetative cDNA clone:VS... 70 1e-07 1
(EL777946) PUNEG29TVB Pythium ultimum ESTs Pythium ultimum D... 52 2e-07 3
(EX613269) 255383409 Pea aphid whole body normalized full le... 44 2e-07 3
(EL780864) PUNEG29TP Pythium ultimum ESTs Pythium ultimum DA... 52 2e-07 3
(CK149983) CsmgEST00693 Culicoides sonorensis female serum-f... 56 5e-07 3
(FE850425) CAFP1172.rev CAFP Pichia stipitis aerobic xylose ... 42 5e-07 3
(CK150735) CsmgEST02033 Culicoides sonorensis female serum-f... 56 7e-07 3
(AY752839) Culicoides sonorensis clone CsRPS8 ribosomal prot... 56 7e-07 3
(EX602770) 255335104 Pea aphid whole body normalized full le... 44 7e-07 3
(CK150315) CsmgEST01298 Culicoides sonorensis female serum-f... 56 8e-07 3
(FF326129) 280429214 Pea aphid whole body normalized full le... 44 8e-07 3
(DY223534) ID0AAI10YJ13RM1 ID0AEE Acyrthosiphon pisum cDNA c... 44 9e-07 3
(EX614180) 255388341 Pea aphid whole body normalized full le... 44 9e-07 3
(CV848415) ID0AEE5CB11RM1 ID0AEE Acyrthosiphon pisum cDNA cl... 44 9e-07 3
(CV834920) ID0ACC27AB01RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 9e-07 3
(CV829976) ID0ACC14BA05RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 9e-07 3
(CV829996) ID0ACC14BC02RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 9e-07 3
(CV833065) ID0ACC21DD05RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 9e-07 3
(FF307751) 279369185 Pea aphid whole body normalized full le... 42 9e-07 3
(CN585341) USDA-FP_128412 Acyrthosiphon pisum, Pea Aphid Acy... 44 9e-07 3
(CV829360) ID0ACC12CA10RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 9e-07 3
(CN755488) ID0AAA16AA02RM1 ApMS Acyrthosiphon pisum cDNA clo... 44 9e-07 3
(FF334759) 280457717 Pea aphid whole body normalized full le... 44 9e-07 3
(FF315191) 279398091 Pea aphid whole body normalized full le... 44 9e-07 3
(EX625923) 255434010 Pea aphid whole body normalized full le... 44 9e-07 3
(FF334722) 280457720 Pea aphid whole body normalized full le... 44 1e-06 3
(FF304702) 279361314 Pea aphid whole body normalized full le... 44 1e-06 3
(CV836672) ID0ACC30DH10RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(FF313963) 279391224 Pea aphid whole body normalized full le... 44 1e-06 3
(CV838372) ID0ACC7DB11RM1 ID0ACC Acyrthosiphon pisum cDNA cl... 44 1e-06 3
(CV834676) ID0ACC26BC12RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(EX632066) 256341487 Pea aphid whole body normalized full le... 44 1e-06 3
(FF295212) 279306687 Pea aphid whole body normalized full le... 44 1e-06 3
(CV837612) ID0ACC5CF01RM1 ID0ACC Acyrthosiphon pisum cDNA cl... 44 1e-06 3
(CV830685) ID0ACC16AH05RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(CV830442) ID0ACC15CB11RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(CV837949) ID0ACC6CD07RM1 ID0ACC Acyrthosiphon pisum cDNA cl... 44 1e-06 3
(CV837680) ID0ACC5DD03RM1 ID0ACC Acyrthosiphon pisum cDNA cl... 44 1e-06 3
(CV836644) ID0ACC30DF03RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(CV835300) ID0ACC28AD01RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(CV833881) ID0ACC24AC11RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(CV833111) ID0ACC21DH07RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(CV829640) ID0ACC13BB08RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 1e-06 3
(FF314502) 279397334 Pea aphid whole body normalized full le... 44 1e-06 3
(FF324024) 280419868 Pea aphid whole body normalized full le... 44 1e-06 3
(EX610907) 255374481 Pea aphid whole body normalized full le... 44 1e-06 3
(FF315367) 279400902 Pea aphid whole body normalized full le... 44 1e-06 3
(FF313947) 279391995 Pea aphid whole body normalized full le... 44 1e-06 3
(CN762393) ID0AAA4AA09RM1 ApMS Acyrthosiphon pisum cDNA clon... 44 1e-06 3
(DB641002) Saccharomyces cerevisiae mRNA, clone: S03052-16_G... 46 1e-06 2
(AQ874238) V105C2 mTn-3xHA/lacZ Insertion Library, strain Y2... 46 2e-06 2
(FE845664) CAFI1090.rev CAFI Pichia stipitis aerobic dextros... 42 3e-06 3
(FE852872) CAFP2470.rev CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE851161) CAFP1571.rev CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE845665) CAFI1090.fwd CAFI Pichia stipitis aerobic dextros... 42 3e-06 3
(FE846494) CAFI764.rev CAFI Pichia stipitis aerobic dextrose... 42 3e-06 3
(FE850903) CAFP1429.rev CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE852873) CAFP2470.fwd CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE851162) CAFP1571.fwd CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE850652) CAFP1294.rev CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE846495) CAFI764.fwd CAFI Pichia stipitis aerobic dextrose... 42 3e-06 3
(FE856826) CAFU837.rev CAFU Pichia stipitis oxygen limited d... 42 3e-06 3
(EX609506) 255370831 Pea aphid whole body normalized full le... 42 3e-06 3
(FE850904) CAFP1429.fwd CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE846477) CAFI755.fwd CAFI Pichia stipitis aerobic dextrose... 42 3e-06 3
(FF325577) 280426615 Pea aphid whole body normalized full le... 44 3e-06 3
(FE850653) CAFP1294.fwd CAFP Pichia stipitis aerobic xylose ... 42 3e-06 3
(FE856827) CAFU837.fwd CAFU Pichia stipitis oxygen limited d... 42 3e-06 3
(FE855982) CAFU391.fwd CAFU Pichia stipitis oxygen limited d... 42 4e-06 3
(FE856977) CAFU919.rev CAFU Pichia stipitis oxygen limited d... 42 4e-06 3
(FE856748) CAFU795.fwd CAFU Pichia stipitis oxygen limited d... 42 4e-06 3
(FE856828) CAFU838.rev CAFU Pichia stipitis oxygen limited d... 42 4e-06 3
(FE856747) CAFU795.rev CAFU Pichia stipitis oxygen limited d... 42 4e-06 3
(FE851529) CAFP1762.fwd CAFP Pichia stipitis aerobic xylose ... 42 4e-06 3
(FE851018) CAFP1493.rev CAFP Pichia stipitis aerobic xylose ... 42 4e-06 3
(FE856978) CAFU919.fwd CAFU Pichia stipitis oxygen limited d... 42 4e-06 3
(FE856829) CAFU838.fwd CAFU Pichia stipitis oxygen limited d... 42 4e-06 3
(FE851019) CAFP1493.fwd CAFP Pichia stipitis aerobic xylose ... 42 4e-06 3
(CR382135) Debaryomyces hansenii strain CBS767 chromosome C ... 58 4e-06 6
(DY902112) 6H-7 Developing seed from A. thaliana (C24) x A. ... 44 8e-06 4
(DN312085) PL06011B2H05 cDNA from juvenile hermaphodites Sch... 46 8e-06 4
(EC827889) TDE00002256 Advantage polymerase (lib1_td_adv) Ta... 50 9e-06 2
(AU007934) Schizosaccharomyces pombe cDNA, clone spc02670. 42 9e-06 2
(EX628748) 255456077 Pea aphid whole body normalized full le... 40 1e-05 3
(CN587620) USDA-FP_130695 Acyrthosiphon pisum, Pea Aphid Acy... 40 1e-05 3
(BJ865264) Marchantia polymorpha cDNA clone:lwb32j09, 5' end. 36 1e-05 5
(BI095910) PIP2C_D6 Sugar Beet germination cDNA library Beta... 40 1e-05 3
(EX604723) 255344526 Pea aphid whole body normalized full le... 44 1e-05 3
(FF294640) 279302404 Pea aphid whole body normalized full le... 40 1e-05 3
(BF011068) SB274 Sugar Beet germination cDNA library Beta vu... 40 1e-05 3
(EX626747) 255441936 Pea aphid whole body normalized full le... 44 1e-05 3
(DR332341) 68485 CERES-147 Arabidopsis thaliana cDNA clone 3... 44 2e-05 3
(ES806182) UFL_626_90 Cotton fiber 0-10 day post anthesis Go... 42 2e-05 4
(DB659416) Saccharomyces cerevisiae mRNA, clone: Y054_J12_F.... 46 2e-05 2
(DB661617) Saccharomyces cerevisiae mRNA, clone: Y072_B18_F.... 46 2e-05 2
(DB664067) Saccharomyces cerevisiae mRNA, clone: Y090_B01_F.... 46 2e-05 2
(CN731831) 24RDBNH_UP_023_F02_12JAN2004_006 Brassica napus 2... 36 3e-05 4
(DN314942) PL06019B1G11 cDNA from juvenile hermaphodites Sch... 44 3e-05 4
(T37481) EST102614 S. cerevisiae strain X2180-1A Saccharomyc... 48 3e-05 2
(T37185) EST102263 S. cerevisiae strain X2180-1A Saccharomyc... 48 3e-05 2
(T37113) EST102181 S. cerevisiae strain X2180-1A Saccharomyc... 48 3e-05 2
(T38708) EST104243 S. cerevisiae strain X2180-1A Saccharomyc... 48 3e-05 2
(EG549763) MM02D18_RP Sugar Beet germination cDNA library Be... 40 3e-05 3
(EG550631) MM05B23_RP Sugar Beet germination cDNA library Be... 40 4e-05 3
(DN304990) PL05007A2D12 cDNA from sexually mature hermaphodi... 46 4e-05 3
(FE860604) CAFY720.rev CAFY Pichia stipitis oxygen limited x... 42 4e-05 3
(FE851887) CAFP1956.rev CAFP Pichia stipitis aerobic xylose ... 42 4e-05 3
(FE851888) CAFP1956.fwd CAFP Pichia stipitis aerobic xylose ... 42 4e-05 3
(FE860605) CAFY720.fwd CAFY Pichia stipitis oxygen limited x... 42 4e-05 3
(DN314501) PL06018B1A10 cDNA from juvenile hermaphodites Sch... 46 4e-05 3
(DN295260) PL03019A2F11 cDNA from sexually mature hermaphodi... 46 4e-05 3
(ES821105) UFL_384_66 Cotton fiber 0-10 day post anthesis Go... 42 4e-05 4
(BP818203) Arabidopsis thaliana cDNA clone:RAFL22-47-F22, 5'... 48 5e-05 3
(EX654071) 256822244 Pea aphid whole body normalized full le... 44 5e-05 3
(FF317323) 280391312 Pea aphid whole body normalized full le... 38 5e-05 3
(ES809022) UFL_222_11 Cotton fiber 0-10 day post anthesis Go... 42 5e-05 4
(BP856611) Arabidopsis thaliana cDNA clone:RAFL25-30-K23, 5'... 48 6e-05 3
(DY493209) sh2P0008I17_F.ab1 adult sheep fracture callus 7d ... 46 7e-05 2
(CR380947) Candida glabrata strain CBS138 chromosome A compl... 42 7e-05 5
(CU329670) Schizosaccharomyces pombe chromosome I. 42 9e-05 2
(DI137060) Target gene of anti-cancer drugs and screening ki... 42 1e-04 2
(DI130994) Target gene of anti-cancer drugs and screening ki... 42 1e-04 2
(AU009281) Schizosaccharomyces pombe cDNA, clone spc04713. 42 1e-04 2
(AU009187) Schizosaccharomyces pombe cDNA, clone spc04588. 42 1e-04 2
(AU008209) Schizosaccharomyces pombe cDNA, clone spc03051. 42 1e-04 2
(AU007020) Schizosaccharomyces pombe cDNA, clone spc01336. 42 1e-04 2
(AU008132) Schizosaccharomyces pombe cDNA, clone spc02909. 42 1e-04 2
(AU010990) Schizosaccharomyces pombe cDNA, clone spc10623. 42 1e-04 2
(AU006870) Schizosaccharomyces pombe cDNA, clone spc01058. 42 1e-04 2
(CN763600) ID0AAA7CB03RM1 ApMS Acyrthosiphon pisum cDNA clon... 36 2e-04 3
(CN756893) ID0AAA19DG10RM1 ApMS Acyrthosiphon pisum cDNA clo... 36 2e-04 3
(EX618061) 255402141 Pea aphid whole body normalized full le... 44 2e-04 3
(EX625479) 255434435 Pea aphid whole body normalized full le... 36 2e-04 3
(FF296039) 279307836 Pea aphid whole body normalized full le... 44 2e-04 3
(EX635534) 256604819 Pea aphid whole body normalized full le... 36 2e-04 3
(BE529456) M74B12STM Arabidopsis developing seed Arabidopsis... 44 2e-04 3
(BE529371) M74O12STM Arabidopsis developing seed Arabidopsis... 44 3e-04 3
(CV178140) DYSDERA45PCR_H08_1_064 Dysdera erythrina cDNA Dys... 52 3e-04 2
(CV178485) DYSDERA4POLYT_H08_1_064 Dysdera erythrina cDNA Dy... 52 4e-04 2
(EG515772) AYBJW62TR pooled cDNA populations Arabidopsis tha... 44 4e-04 3
(EG515771) AYBJW62TF pooled cDNA populations Arabidopsis tha... 44 4e-04 3
(CV177854) DYSDERA15PCR_C11_1_082 Dysdera erythrina cDNA Dys... 52 4e-04 2
(AU009013) Schizosaccharomyces pombe cDNA, clone spc04347. 40 5e-04 2
(EA366099) Sequence 950 from patent US 7309815. 44 5e-04 3
(DR332282) 135374 CERES-149 Arabidopsis thaliana cDNA clone ... 44 5e-04 3
(AV822637) Arabidopsis thaliana cDNA clone:RAFL05-09-L23, 5'... 44 5e-04 3
(EX642364) 256643047 Pea aphid whole body normalized full le... 34 5e-04 3
(BP802437) Arabidopsis thaliana cDNA clone:RAFL23-24-N06, 5'... 44 5e-04 3
(DR332307) 64282 CERES-148 Arabidopsis thaliana cDNA clone 2... 44 6e-04 3
(BP857879) Arabidopsis thaliana cDNA clone:RAFL25-35-B11, 5'... 44 6e-04 3
(BP865307) Arabidopsis thaliana cDNA clone:RAFL21-73-K22, 5'... 44 6e-04 3
(BP825215) Arabidopsis thaliana cDNA clone:RAFL22-67-N11, 5'... 44 6e-04 3
(DR332311) 968310 CERES-149 Arabidopsis thaliana cDNA clone ... 44 6e-04 3
(EG493398) AYAYN67TRB pooled cDNA populations Arabidopsis th... 44 6e-04 3
(EG493397) AYAYN67TR pooled cDNA populations Arabidopsis tha... 44 6e-04 3
(DR332323) 968067 CERES-149 Arabidopsis thaliana cDNA clone ... 44 6e-04 3
(BP835831) Arabidopsis thaliana cDNA clone:RAFL22-14-J24, 5'... 44 6e-04 3
(EG493395) AYAYN67TFB pooled cDNA populations Arabidopsis th... 44 6e-04 3
(EG493394) AYAYN67TF pooled cDNA populations Arabidopsis tha... 44 6e-04 3
(AV553783) Arabidopsis thaliana cDNA clone:RZ72b04R, 5' end. 44 6e-04 3
(EX652339) 256764306 Pea aphid whole body normalized full le... 34 6e-04 3
(DR332267) 59087 CERES-149 Arabidopsis thaliana cDNA clone 2... 44 6e-04 3
(BP839113) Arabidopsis thaliana cDNA clone:RAFL22-26-A19, 5'... 44 6e-04 3
(BP822682) Arabidopsis thaliana cDNA clone:RAFL22-62-H22, 5'... 44 6e-04 3
(BP803067) Arabidopsis thaliana cDNA clone:RAFL23-27-I21, 5'... 44 6e-04 3
(DR332316) 38226 CERES-149 Arabidopsis thaliana cDNA clone 3... 44 6e-04 3
(BP828398) Arabidopsis thaliana cDNA clone:RAFL22-78-L16, 5'... 44 6e-04 3
(DR332343) 139030 CERES-149 Arabidopsis thaliana cDNA clone ... 44 6e-04 3
(DR332325) 991785 CERES-149 Arabidopsis thaliana cDNA clone ... 44 6e-04 3
(DR332301) 161870 CERES-149 Arabidopsis thaliana cDNA clone ... 44 6e-04 3
(DR332297) 1264946 CERES-149 Arabidopsis thaliana cDNA clone... 44 6e-04 3
(BP835727) Arabidopsis thaliana cDNA clone:RAFL22-14-E24, 5'... 44 6e-04 3
(BP837848) Arabidopsis thaliana cDNA clone:RAFL22-22-A22, 5'... 44 6e-04 3
(BP863981) Arabidopsis thaliana cDNA clone:RAFL21-68-L18, 5'... 44 6e-04 3
(BP835834) Arabidopsis thaliana cDNA clone:RAFL22-14-K03, 5'... 44 6e-04 3
(BP829697) Arabidopsis thaliana cDNA clone:RAFL22-82-N17, 5'... 44 6e-04 3
(BP818136) Arabidopsis thaliana cDNA clone:RAFL22-47-C13, 5'... 44 6e-04 3
(BP818350) Arabidopsis thaliana cDNA clone:RAFL22-47-N11, 5'... 44 6e-04 3
(BP823995) Arabidopsis thaliana cDNA clone:RAFL22-08-D12, 5'... 44 6e-04 3
(BP852979) Arabidopsis thaliana cDNA clone:RAFL25-21-L12, 5'... 44 6e-04 3
(BP844078) Arabidopsis thaliana cDNA clone:RAFL21-88-P19, 5'... 44 6e-04 3
(BP811947) Arabidopsis thaliana cDNA clone:RAFL22-01-M11, 5'... 44 6e-04 3
(BP808312) Arabidopsis thaliana cDNA clone:RAFL24-17-E09, 5'... 44 6e-04 3
(BP832879) Arabidopsis thaliana cDNA clone:RAFL22-94-B08, 5'... 44 6e-04 3
(BP868703) Arabidopsis thaliana cDNA clone:RAFL21-85-D24, 5'... 44 6e-04 3
(BP847751) Arabidopsis thaliana cDNA clone:RAFL25-03-A04, 5'... 44 6e-04 3
(BP829080) Arabidopsis thaliana cDNA clone:RAFL22-80-O16, 5'... 44 6e-04 3
(BP813538) Arabidopsis thaliana cDNA clone:RAFL22-06-L20, 5'... 44 6e-04 3
(DR332335) 968256 CERES-149 Arabidopsis thaliana cDNA clone ... 44 7e-04 3
(DR332329) 4523274 CERES-149 Arabidopsis thaliana cDNA clone... 44 7e-04 3
(DR332281) 4514268 CERES-149 Arabidopsis thaliana cDNA clone... 44 7e-04 3
(DR332322) 56022 CERES-149 Arabidopsis thaliana cDNA clone 2... 44 7e-04 3
(BP821574) Arabidopsis thaliana cDNA clone:RAFL22-58-I07, 5'... 44 7e-04 3
(BP844108) Arabidopsis thaliana cDNA clone:RAFL21-89-B11, 5'... 44 7e-04 3
(BP840761) Arabidopsis thaliana cDNA clone:RAFL22-31-C11, 5'... 44 7e-04 3
(BP830700) Arabidopsis thaliana cDNA clone:RAFL22-86-F06, 5'... 44 7e-04 3
(BP813899) Arabidopsis thaliana cDNA clone:RAFL22-34-A07, 5'... 44 7e-04 3
(T04738) 785 Lambda-PRL2 Arabidopsis thaliana cDNA clone 31D... 44 7e-04 3
(BP863647) Arabidopsis thaliana cDNA clone:RAFL21-67-I06, 5'... 44 7e-04 3
(BP820166) Arabidopsis thaliana cDNA clone:RAFL22-53-K12, 5'... 44 7e-04 3
(DR332340) 59552 CERES-147 Arabidopsis thaliana cDNA clone 2... 44 7e-04 3
(DR332290) 74883 CERES-148 Arabidopsis thaliana cDNA clone 4... 44 7e-04 3
(BP832014) Arabidopsis thaliana cDNA clone:RAFL22-91-C19, 5'... 44 7e-04 3
(BP855249) Arabidopsis thaliana cDNA clone:RAFL25-26-A14, 5'... 44 7e-04 3
(BP816376) Arabidopsis thaliana cDNA clone:RAFL22-41-L07, 5'... 44 7e-04 3
(DR332313) 963001 CERES-148 Arabidopsis thaliana cDNA clone ... 44 7e-04 3
(BP811405) Arabidopsis thaliana cDNA clone:RAFL24-30-I15, 5'... 44 7e-04 3
(BP856955) Arabidopsis thaliana cDNA clone:RAFL25-31-N19, 5'... 44 7e-04 3
(DR332294) 43100 CERES-147 Arabidopsis thaliana cDNA clone 8... 44 7e-04 3
(DJ211377) Method for identification of useful proteins deri... 46 7e-04 2
(DR332321) 1131221 CERES-148 Arabidopsis thaliana cDNA clone... 44 7e-04 3
(DR332305) 4515541 CERES-149 Arabidopsis thaliana cDNA clone... 44 8e-04 3
(DR332271) 4514312 CERES-149 Arabidopsis thaliana cDNA clone... 44 8e-04 3
(CB254851) 58-E010741-019-001-D08-T7R MPIZ-ADIS-019 Arabidop... 44 8e-04 3
(DR332273) 1142187 CERES-147 Arabidopsis thaliana cDNA clone... 44 8e-04 3
(DR332295) 1147208 CERES-147 Arabidopsis thaliana cDNA clone... 44 8e-04 3
(EG502021) AYBGC51TR pooled cDNA populations Arabidopsis tha... 44 8e-04 3
(EG502019) AYBGC51TF pooled cDNA populations Arabidopsis tha... 44 8e-04 3
(DR332344) 968182 CERES-149 Arabidopsis thaliana cDNA clone ... 44 8e-04 3
(DR332334) 67534 CERES-147 Arabidopsis thaliana cDNA clone 3... 44 8e-04 3
(DR332308) 1144238 CERES-148 Arabidopsis thaliana cDNA clone... 44 8e-04 3
(DR332279) 53973 CERES-147 Arabidopsis thaliana cDNA clone 1... 44 8e-04 3
(DR332338) 1150357 CERES-147 Arabidopsis thaliana cDNA clone... 44 8e-04 3
(DR332291) 43930 CERES-147 Arabidopsis thaliana cDNA clone 9... 44 9e-04 3
(DR332320) 5742562 CERES-AL46 Arabidopsis thaliana cDNA clon... 44 9e-04 3
(DR332314) 142185 CERES-149 Arabidopsis thaliana cDNA clone ... 44 9e-04 3
(DR332339) 67824 CERES-147 Arabidopsis thaliana cDNA clone 3... 44 9e-04 3
(T45825) 9088 Lambda-PRL2 Arabidopsis thaliana cDNA clone 13... 44 9e-04 3
(DR332287) 143670 CERES-148 Arabidopsis thaliana cDNA clone ... 44 9e-04 3
(DR332302) 142984 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332288) 158775 CERES-149 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332269) 52826 CERES-147 Arabidopsis thaliana cDNA clone 1... 44 0.001 3
(DR332327) 4523899 CERES-149 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332299) 1146145 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332326) 4500085 CERES-148 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332317) 38973 CERES-149 Arabidopsis thaliana cDNA clone 4... 44 0.001 3
(DR331855) 59917 CERES-148 Arabidopsis thaliana cDNA clone 2... 44 0.001 3
(DR332345) 114762 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332303) 4500008 CERES-148 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332284) 140124 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332272) 66102 CERES-147 Arabidopsis thaliana cDNA clone 3... 44 0.001 3
(DR332331) 1145534 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332318) 158280 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332306) 34668 CERES-129 Arabidopsis thaliana cDNA clone 4... 44 0.001 3
(DR332283) 1105406 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR331854) 1081820 CERES-148 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332332) 1138716 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332315) 113208 CERES-147 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR331856) 44319 CERES-147 Arabidopsis thaliana cDNA clone 9... 44 0.001 3
(CB263403) 23-E8976-008-017-N05-pBl2 MPIZ-ADIS-008 Arabidops... 44 0.001 3
(DR332333) 1134361 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332296) 1147885 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332289) 131164 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332319) 1135251 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332278) 1134404 CERES-147 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332324) 960087 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332298) 961411 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332330) 1135754 CERES-148 Arabidopsis thaliana cDNA clone... 44 0.001 3
(DR332292) 40992 CERES-148 Arabidopsis thaliana cDNA clone 6... 44 0.001 3
(DR332286) 143293 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332300) 162332 CERES-149 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332285) 4250575 CERES-149 Arabidopsis thaliana cDNA clone... 44 0.001 3
(AZ931217) 474.dhz63d07.s1 Saccharomyces unisporus NRRL Y-15... 42 0.001 2
(DR332280) 141613 CERES-149 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR331853) 51136 CERES-148 Arabidopsis thaliana cDNA clone 1... 44 0.001 3
(DR332270) 165893 CERES-149 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(DR332336) 141374 CERES-148 Arabidopsis thaliana cDNA clone ... 44 0.001 3
(EG493409) AYAYN70TRB pooled cDNA populations Arabidopsis th... 44 0.001 3
(T45503) 8766 Lambda-PRL2 Arabidopsis thaliana cDNA clone 13... 44 0.001 3
(T44611) 7874 Lambda-PRL2 Arabidopsis thaliana cDNA clone 12... 44 0.001 3
(EG493406) AYAYN70TFB pooled cDNA populations Arabidopsis th... 44 0.001 3
(AV826287) Arabidopsis thaliana cDNA clone:RAFL08-12-D04, 5'... 44 0.001 3
(DR460526) CM087G07 Cotton Lambda Zap Express Library Gossyp... 42 0.001 3
(CK119016) 215a09.p1 AtM1 Arabidopsis thaliana cDNA clone MP... 44 0.001 3
(FG344216) SF_16-198R Bv_T0 Beta vulgaris subsp. vulgaris cD... 40 0.001 3
(FE852520) CAFP2289.rev CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE851744) CAFP1881.rev CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE852542) CAFP2300.rev CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE852397) CAFP2222.rev CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE845880) CAFI436.rev CAFI Pichia stipitis aerobic dextrose... 42 0.001 2
(FE852837) CAFP2452.fwd CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE852836) CAFP2452.rev CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(CB253627) 93-E010696-019-002-I23-T7R MPIZ-ADIS-019 Arabidop... 44 0.001 3
(FE851745) CAFP1881.fwd CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE852521) CAFP2289.fwd CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE852543) CAFP2300.fwd CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE852398) CAFP2222.fwd CAFP Pichia stipitis aerobic xylose ... 42 0.001 2
(FE845881) CAFI436.fwd CAFI Pichia stipitis aerobic dextrose... 42 0.001 2
(EG508513) AYBJY69TR pooled cDNA populations Arabidopsis tha... 44 0.001 3
(EG508512) AYBJY69TF pooled cDNA populations Arabidopsis tha... 44 0.001 3
(EG508524) AYBJY74TR pooled cDNA populations Arabidopsis tha... 44 0.001 3
(EG508523) AYBJY74TF pooled cDNA populations Arabidopsis tha... 44 0.001 3
(EG508528) AYBJY76TR pooled cDNA populations Arabidopsis tha... 44 0.001 3
(EG508527) AYBJY76TF pooled cDNA populations Arabidopsis tha... 44 0.001 3
(EG508521) AYBJY73TF pooled cDNA populations Arabidopsis tha... 44 0.001 3
(DR332277) 11071725 CERES-AN65 Arabidopsis thaliana cDNA clo... 44 0.001 3
(FE846473) CAFI753.fwd CAFI Pichia stipitis aerobic dextrose... 42 0.001 2
(CA781664) 005A03AF Infected Arabidopsis Leaf Arabidopsis th... 44 0.001 3
(H36400) 14922 Lambda-PRL2 Arabidopsis thaliana cDNA clone 1... 44 0.001 3
(FE846597) CAFI817.fwd CAFI Pichia stipitis aerobic dextrose... 42 0.001 2
(FE846596) CAFI817.rev CAFI Pichia stipitis aerobic dextrose... 42 0.001 2
(DN779360) CFUS8.1C04 Cotton Root and Hypocotyl tissues infe... 42 0.002 3
(BP561241) Arabidopsis thaliana cDNA clone:RAFL06-69-K08, 5'... 44 0.002 3
(FE851528) CAFP1762.rev CAFP Pichia stipitis aerobic xylose ... 42 0.002 2
(FE852487) CAFP2272.rev CAFP Pichia stipitis aerobic xylose ... 42 0.002 2
(FE853000) CAFP2537.fwd CAFP Pichia stipitis aerobic xylose ... 42 0.002 2
(FE852999) CAFP2537.rev CAFP Pichia stipitis aerobic xylose ... 42 0.002 2
(CB264108) 91-E014660-035-002-F23-T7R MPIZ-ADIS-035 Arabidop... 44 0.002 3
(BQ403047) GA__Ed0053C08f Gossypium arboreum 7-10 dpa fiber ... 42 0.002 3
(CK119259) 213f16.p1 AtM1 Arabidopsis thaliana cDNA clone MP... 44 0.002 3
(FE852488) CAFP2272.fwd CAFP Pichia stipitis aerobic xylose ... 42 0.002 2
(AW587482) IPPGHZ0069 Cotton fiber and embryo Lambda Zap Exp... 42 0.002 3
(CF587986) USDA-FP_121100-067 Acyrthosiphon pisum, Pea Aphid... 34 0.002 3
(EG508522) AYBJY73TR pooled cDNA populations Arabidopsis tha... 44 0.002 3
(AU014352) Schizosaccharomyces pombe cDNA, clone spc09619. 42 0.002 2
(T38233) EST103650 S. cerevisiae strain X2180-1A Saccharomyc... 42 0.002 2
(T37794) EST103047 S. cerevisiae strain X2180-1A Saccharomyc... 42 0.002 2
(BF270508) GA__Eb0008O05f Gossypium arboreum 7-10 dpa fiber ... 42 0.002 3
(BQ406245) GA__Ed0092D07f Gossypium arboreum 7-10 dpa fiber ... 42 0.002 3
(DR332275) 12838181 CERES-AN65 Arabidopsis thaliana cDNA clo... 44 0.002 3
(DR332312) 11058872 CERES-AN65 Arabidopsis thaliana cDNA clo... 44 0.002 3
(BI096009) PIP2D_A9 Sugar Beet germination cDNA library Beta... 40 0.002 3
(BE037738) AA03E03 AA Arabidopsis thaliana cDNA 5' similar t... 44 0.002 3
(EG518170) AYBIZ15TR pooled cDNA populations Arabidopsis tha... 44 0.002 3
(EG518169) AYBIZ15TF pooled cDNA populations Arabidopsis tha... 44 0.002 3
(EX654110) 256815541 Pea aphid whole body normalized full le... 34 0.002 3
(CK117678) 214m04.p1 AtM1 Arabidopsis thaliana cDNA clone MP... 44 0.002 3
(DR332274) 1081834 CERES-148 Arabidopsis thaliana cDNA clone... 44 0.002 3
(EG449420) AYARI41TF pooled cDNA populations Arabidopsis tha... 44 0.003 3
(EG457298) AYAVW36TF pooled cDNA populations Arabidopsis tha... 44 0.003 3
(ES838563) UFL_044_64 Cotton fiber 0-10 day post anthesis Go... 42 0.003 3
(EG457283) AYAVW27TF pooled cDNA populations Arabidopsis tha... 44 0.003 3
(BX831734) Arabidopsis thaliana Full-length cDNA Complete se... 44 0.003 3
(EG457290) AYAVW30TF pooled cDNA populations Arabidopsis tha... 44 0.003 3
(EG457280) AYAVW26TF pooled cDNA populations Arabidopsis tha... 44 0.003 3
(BX829978) Arabidopsis thaliana Full-length cDNA Complete se... 44 0.003 3
(EL775233) PUNAK19TV Pythium ultimum ESTs Pythium ultimum DA... 52 0.003 2
(BX829620) Arabidopsis thaliana Full-length cDNA Complete se... 44 0.003 3
(EL782284) PUNCG30TV Pythium ultimum ESTs Pythium ultimum DA... 52 0.003 2
(AY086963) Arabidopsis thaliana clone 29997 mRNA, complete s... 44 0.003 3
(AY052338) Arabidopsis thaliana AT5g20290/F5O24_180 mRNA, co... 44 0.003 3
(AK226280) Arabidopsis thaliana mRNA for hypothetical protei... 44 0.003 3
(ES798617) UFL_617_48 Cotton fiber 0-10 day post anthesis Go... 42 0.003 3
(AY050937) Arabidopsis thaliana unknown protein (At5g20290) ... 44 0.003 3
(AC152116) Pichia stipitis clone JGIAHYZ-21P24, complete seq... 42 0.004 3
(EL777303) PUNCO85TV Pythium ultimum ESTs Pythium ultimum DA... 52 0.004 2
(ES799508) UFL_583_69 Cotton fiber 0-10 day post anthesis Go... 42 0.004 3
(ES841636) UFL_079_25 Cotton fiber 0-10 day post anthesis Go... 42 0.004 3
(EL780262) PUNAA94TV Pythium ultimum ESTs Pythium ultimum DA... 52 0.004 2
(FD559800) RR4FN56TF RR4(PB) Raphanus raphanistrum subsp. la... 36 0.004 4
(EL774317) PUNCZ25TV Pythium ultimum ESTs Pythium ultimum DA... 52 0.005 2
(CF587531) USDA-FP_120500-052 Acyrthosiphon pisum, Pea Aphid... 44 0.005 2
(CN586509) USDA-FP_129581 Acyrthosiphon pisum, Pea Aphid Acy... 44 0.005 2
(CF546514) DS0065 Pea aphid, whole body Acyrthosiphon pisum ... 44 0.005 2
(CN764059) ID0AAA8DD11RM1 ApMS Acyrthosiphon pisum cDNA clon... 44 0.005 2
(CN760552) ID0AAA28DB02RM1 ApMS Acyrthosiphon pisum cDNA clo... 44 0.005 2
(CV828742) ID0ACC10DC02RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 0.005 2
(DY226362) ID0AAI8YD10RM1 ID0AEE Acyrthosiphon pisum cDNA cl... 44 0.005 2
(DJ130145) Method for identification of useful proteins deri... 36 0.005 3
(FF328120) 280435474 Pea aphid whole body normalized full le... 44 0.005 2
(EH788747) CNSS28785.b1_B22.ab1 CNS(LMS) yellow starthistle ... 44 0.005 2
(CV831063) ID0ACC17BB04RM1 ID0ACC Acyrthosiphon pisum cDNA c... 44 0.005 2
(CN583038) USDA-FP_126102 Acyrthosiphon pisum, Pea Aphid Acy... 44 0.005 2
(FF300519) 279337701 Pea aphid whole body normalized full le... 44 0.005 2
(EX609399) 255369043 Pea aphid whole body normalized full le... 44 0.006 2
(FF301021) 279343650 Pea aphid whole body normalized full le... 44 0.006 2
(EC387639) E08_E08g2k15_pDNRf_455612 Myzus persicae, tobacco... 44 0.006 2
(EX646014) 256699796 Pea aphid whole body normalized full le... 44 0.006 2
(EC387728) G08_G08g2l15_pDNRf_455614 Myzus persicae, tobacco... 44 0.006 2
(CN586880) USDA-FP_129952 Acyrthosiphon pisum, Pea Aphid Acy... 44 0.006 2
(FF305750) 279364426 Pea aphid whole body normalized full le... 44 0.006 2
(FF299111) 279327409 Pea aphid whole body normalized full le... 44 0.006 2
(FF314050) 279392438 Pea aphid whole body normalized full le... 44 0.006 2
(EX615359) 255390821 Pea aphid whole body normalized full le... 44 0.006 2
(EX611474) 255375965 Pea aphid whole body normalized full le... 44 0.006 2
(FF336708) 280462904 Pea aphid whole body normalized full le... 44 0.006 2
(EX632379) 256353170 Pea aphid whole body normalized full le... 44 0.006 2
(FF331570) 280447298 Pea aphid whole body normalized full le... 44 0.006 2
(FF312000) 279384484 Pea aphid whole body normalized full le... 44 0.006 2
(FF310625) 279378916 Pea aphid whole body normalized full le... 44 0.006 2
(FF314900) 279397532 Pea aphid whole body normalized full le... 44 0.006 2
(FF297606) 279317329 Pea aphid whole body normalized full le... 44 0.006 2
(EX609031) 255368498 Pea aphid whole body normalized full le... 44 0.006 2
(FF328466) 280436731 Pea aphid whole body normalized full le... 44 0.006 2
(ES791608) UFL_530_29 Cotton fiber 0-10 day post anthesis Go... 42 0.006 3
(FF314928) 279397906 Pea aphid whole body normalized full le... 44 0.006 2
(FF297060) 279316049 Pea aphid whole body normalized full le... 44 0.006 2
(FF330447) 280443650 Pea aphid whole body normalized full le... 44 0.006 2
(EE264110) E10_E10gf3o19_pDNRf_505568 Myzus persicae, line G... 44 0.006 2
(ES807851) UFL_630_57 Cotton fiber 0-10 day post anthesis Go... 42 0.006 3
(AY061909) Arabidopsis thaliana AT5g20290/F5O24_180 mRNA, co... 42 0.007 3
(ES807302) UFL_644_63 Cotton fiber 0-10 day post anthesis Go... 42 0.007 3
(AY091172) Arabidopsis thaliana unknown protein (At5g20290) ... 42 0.007 3
(CD451000) USDA-FP_103038 Adult Alate Brown Citrus Aphid Tox... 46 0.007 3
(AM096331) Lutzomyia longipalpis EST clone NSFM-87d10, seque... 38 0.007 3
(FF048566) 429414_1044_3725 Pythium ultimum ESTs Pythium ult... 54 0.008 1
(AM096330) Lutzomyia longipalpis EST clone NSFM-137b08, sequ... 38 0.008 3
(AM096329) Lutzomyia longipalpis EST clone NSFM-137b08, sequ... 38 0.008 3
(EX625826) 255434821 Pea aphid whole body normalized full le... 36 0.009 3
(CV274887) WS0174.B21.1_L08 PTxD-NR-A-8 Populus trichocarpa ... 50 0.012 2
(ES832050) UFL_372_93 Cotton fiber 0-10 day post anthesis Go... 42 0.013 3
(DR332310) 111349 CERES-147 Arabidopsis thaliana cDNA clone ... 40 0.014 3
(EW750423) sb_006_10D02_m13reverselong Onychiurus arcticus d... 44 0.015 2
(DR394353) USDA-FP_154287 Adult Alate Aphis gossypii (WHAGA)... 44 0.017 3
(EC829745) TDE00003417 Advantage polymerase (lib1_td_adv) Ta... 50 0.018 2
(DR393380) USDA-FP_153312 Adult Alate Aphis gossypii (WHAGA)... 44 0.021 3
(DR393790) USDA-FP_153724 Adult Alate Aphis gossypii (WHAGA)... 44 0.021 3

>(BJ432042) Dictyostelium discoideum cDNA clone:ddv17n07, 3' end,
single read.
Length = 674

Score = 1144 bits (577), Expect(2) = 0.0
Identities = 577/577 (100%)
Strand = Plus / Minus


Query: 22 cagacacacaaaatgggtatttctcgtgacgctctccacaaacatagacttacaggtgct 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cagacacacaaaatgggtatttctcgtgacgctctccacaaacatagacttacaggtgct 613


Query: 82 gcccgtaaatgtaactacaaaaagagaaagtatgagttaggtagacaagctgccaaaaca 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gcccgtaaatgtaactacaaaaagagaaagtatgagttaggtagacaagctgccaaaaca 553


Query: 142 aagatttgctctcaaggtgaagaaaagcgtgttagatcaatcagagttcgtggtggtcac 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aagatttgctctcaaggtgaagaaaagcgtgttagatcaatcagagttcgtggtggtcac 493


Query: 202 caaaaattcagagccttaagactcgatactggtaatttctcatgggccaccgaaaagatc 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 caaaaattcagagccttaagactcgatactggtaatttctcatgggccaccgaaaagatc 433


Query: 262 acccgtaaatgtcgtatccttaacgtcgtttacaatgccacctctaacgatttagtccgt 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acccgtaaatgtcgtatccttaacgtcgtttacaatgccacctctaacgatttagtccgt 373


Query: 322 accaataccctcgttaaaggttcaatcgtccaaattgatgccaccccatacaaacaatgg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 accaataccctcgttaaaggttcaatcgtccaaattgatgccaccccatacaaacaatgg 313


Query: 382 tatgaaactcactacggtgttgttgttggtaaaaagaaatccgccaaaaaggacggtgaa 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tatgaaactcactacggtgttgttgttggtaaaaagaaatccgccaaaaaggacggtgaa 253


Query: 442 gctgaacaagttgtcaagaaatccgcttctctccttgccaaacttgcctcaagagctaag 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gctgaacaagttgtcaagaaatccgcttctctccttgccaaacttgcctcaagagctaag 193


Query: 502 ggtagagttttagattcagccatcgaatcacaaatcggtgaaggtcgtttctttgctcgt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggtagagttttagattcagccatcgaatcacaaatcggtgaaggtcgtttctttgctcgt 133


Query: 562 atcacctcaagaccaggtcaagtcggtaaatgtgatg 598
|||||||||||||||||||||||||||||||||||||
Sbjct: 132 atcacctcaagaccaggtcaagtcggtaaatgtgatg 96

Score = 188 bits (95), Expect(2) = 0.0
Identities = 95/95 (100%)
Strand = Plus / Minus


Query: 599 aatgtgatggttacatcttagaagctaaggaattagaattctaccaaagaagactccaaa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 aatgtgatggttacatcttagaagctaaggaattagaattctaccaaagaagactccaaa 45


Query: 659 agaagaaatctgccaaataaacatacagattattt 693
|||||||||||||||||||||||||||||||||||
Sbjct: 44 agaagaaatctgccaaataaacatacagattattt 10

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 746,216,699
Number of extensions: 43465410
Number of successful extensions: 3356406
Number of sequences better than 10.0: 1248
Length of query: 744
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 720
Effective length of database: 96,409,374,237
Effective search space: 69414749450640
Effective search space used: 69414749450640
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15461-1 (Contig-U15461-1Q) /CSM_Contig/Contig-U15461-1Q.Seq.d
(744 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54E24) RecName: Full=40S ribosomal protein S8; 357 2e-97
BT053433_1(BT053433|pid:none) Medicago truncatula clone MTYFP_FQ... 214 2e-54
DQ122869_1(DQ122869|pid:none) Chlamydomonas incerta 40S ribosoma... 214 2e-54
DQ200362_1(DQ200362|pid:none) Solanum tuberosum clone 054E02 unk... 213 5e-54
(Q08069) RecName: Full=40S ribosomal protein S8; &BT035428_1(BT... 213 7e-54
D38010_1(D38010|pid:none) Oryza sativa Japonica Group mRNA for r... 212 9e-54
(P49199) RecName: Full=40S ribosomal protein S8; &AK102757_1(AK... 212 9e-54
AK068316_1(AK068316|pid:none) Oryza sativa Japonica Group cDNA c... 211 1e-53
(Q9FIF3) RecName: Full=40S ribosomal protein S8-2; &AB016890_14... 209 1e-52
EF082565_1(EF082565|pid:none) Picea sitchensis clone WS02714_P12... 209 1e-52
BT036199_1(BT036199|pid:none) Zea mays full-length cDNA clone ZM... 208 2e-52
EU285008_1(EU285008|pid:none) TSA: Elaeis guineensis EgEfMPOB001... 208 2e-52
DQ268855_1(DQ268855|pid:none) Solanum tuberosum clone 172G07 put... 208 2e-52
EF144435_1(EF144435|pid:none) Populus trichocarpa clone PX0019_H... 207 2e-52
BT051230_1(BT051230|pid:none) Medicago truncatula clone MTYF1_F2... 207 2e-52
CP001331_97(CP001331|pid:none) Micromonas sp. RCC299 chromosome ... 207 3e-52
AM436537_1(AM436537|pid:none) Vitis vinifera contig VV78X219952.... 207 3e-52
(O81361) RecName: Full=40S ribosomal protein S8; &AF071889_1(AF... 206 5e-52
FJ002430_1(FJ002430|pid:none) Picrorhiza kurrooa putative 40S ri... 204 2e-51
CR382125_889(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 204 3e-51
FM992689_507(FM992689|pid:none) Candida dubliniensis CD36 chromo... 204 3e-51
CU928167_275(CU928167|pid:none) Kluyveromyces thermotolerans str... 203 4e-51
BX538353_26(BX538353|pid:none) Cryptosporidium parvum chromosome... 203 4e-51
CR380947_188(CR380947|pid:none) Candida glabrata strain CBS138 c... 202 9e-51
BT066121_1(BT066121|pid:none) Zea mays full-length cDNA clone ZM... 201 3e-50
(P62241) RecName: Full=40S ribosomal protein S8; &(P62242) RecN... 201 3e-50
(P05754) RecName: Full=40S ribosomal protein S8; AltName: Full=S... 201 3e-50
AX882860_1(AX882860|pid:none) Sequence 17765 from Patent EP10746... 199 6e-50
DQ440035_1(DQ440035|pid:none) Aedes aegypti clone AE-266 40S rib... 199 8e-50
BC086899_1(BC086899|pid:none) Mus musculus ribosomal protein S8,... 199 1e-49
EU934297_1(EU934297|pid:none) TSA: Anopheles darlingi AD-242 rib... 199 1e-49
EU124612_1(EU124612|pid:none) Lutzomyia longipalpis 40S ribosoma... 198 1e-49
DQ214431_1(DQ214431|pid:none) Taeniopygia guttata clone 0062P000... 198 1e-49
AK088660_1(AK088660|pid:none) Mus musculus 2 days neonate thymus... 198 2e-49
DQ214433_1(DQ214433|pid:none) Taeniopygia guttata clone 0061P002... 197 2e-49
EF638994_1(EF638994|pid:none) Triatoma infestans clone TI-356 40... 197 4e-49
BC118703_1(BC118703|pid:none) Xenopus tropicalis hypothetical pr... 197 4e-49
BC095780_1(BC095780|pid:none) Danio rerio zgc:112361, mRNA (cDNA... 196 5e-49
FN392319_755(FN392319|pid:none) Pichia pastoris GS115 chromosome... 196 5e-49
DQ214432_1(DQ214432|pid:none) Taeniopygia guttata clone 0064P000... 196 6e-49
AY961559_1(AY961559|pid:none) Lysiphlebus testaceipes ribosomal ... 196 6e-49
EU045337_1(EU045337|pid:none) Phlebotomus papatasi 40S ribosomal... 196 6e-49
(P48156) RecName: Full=40S ribosomal protein S8; &T16343(T16343... 195 1e-48
AM980967_1(AM980967|pid:none) Echinorhynchus truttae partial mRN... 194 2e-48
(Q8WQI5) RecName: Full=40S ribosomal protein S8; &AY072291_1(AY... 194 2e-48
EF634867_1(EF634867|pid:none) Pristionchus sp. 11 RS5228 small s... 194 3e-48
AY752839_1(AY752839|pid:none) Culicoides sonorensis clone CsRPS8... 194 3e-48
EF634866_1(EF634866|pid:none) Pristionchus sp. 10 RS5133 small s... 193 5e-48
AB291561_1(AB291561|pid:none) Solea senegalensis rpS8 mRNA for r... 193 5e-48
AM048935_1(AM048935|pid:none) Agriotes lineatus mRNA for ribosom... 191 2e-47
(Q9ZT56) RecName: Full=40S ribosomal protein S8; &AF078069_1(AF... 191 2e-47
AY857465_1(AY857465|pid:none) Suberites domuncula S8 mRNA, compl... 191 2e-47
(Q8MLY8) RecName: Full=40S ribosomal protein S8; &AE014297_4637... 191 2e-47
BT070732_1(BT070732|pid:none) Picea sitchensis clone WS02747_G07... 191 2e-47
EF634868_1(EF634868|pid:none) Pristionchus americanus small subu... 191 2e-47
BC075199_1(BC075199|pid:none) Xenopus laevis MGC83421 protein, m... 191 3e-47
EF634865_1(EF634865|pid:none) Pristionchus pseudaerivorus small ... 191 3e-47
(Q90YR6) RecName: Full=40S ribosomal protein S8; &AF402816_1(AF... 191 3e-47
AM048938_1(AM048938|pid:none) Mycetophagus quadripustulatus mRNA... 189 6e-47
EF634870_1(EF634870|pid:none) Pristionchus sp. 14 RS5230 small s... 189 6e-47
T49800(T49800)probable ribosomal protein Rps8bp [imported] - Neu... 189 8e-47
EF634863_1(EF634863|pid:none) Pristionchus marianneae small subu... 189 1e-46
BT043766_1(BT043766|pid:none) Salmo salar clone HM6_1184 ribosom... 189 1e-46
EF070599_1(EF070599|pid:none) Maconellicoccus hirsutus clone WHM... 189 1e-46
AL356834_2(AL356834|pid:none) Neurospora crassa DNA linkage grou... 189 1e-46
CU638743_625(CU638743|pid:none) Podospora anserina genomic DNA c... 188 1e-46
AM048937_1(AM048937|pid:none) Georissus sp. APV-2005 mRNA for ri... 188 1e-46
DQ066206_1(DQ066206|pid:none) Ixodes scapularis isolate ISUFL48 ... 188 1e-46
AM048940_1(AM048940|pid:none) Sphaerius sp. APV-2005 mRNA for ri... 188 2e-46
(Q9P7B2) RecName: Full=40S ribosomal protein S8-B; &AL163481_5(... 187 2e-46
CR548612_336(CR548612|pid:none) Paramecium tetraurelia macronucl... 187 3e-46
EF634871_1(EF634871|pid:none) Pristionchus sp. 15 RS5229 small s... 187 3e-46
(O14049) RecName: Full=40S ribosomal protein S8-A; &CU329670_17... 187 3e-46
(Q4UFS9) RecName: Full=40S ribosomal protein S8; &CR940348_12(C... 187 4e-46
AK340156_1(AK340156|pid:none) Acyrthosiphon pisum ACYPI001578 mR... 186 7e-46
CR382132_1036(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 182 7e-45
EZ048832_1(EZ048832|pid:none) TSA: Stomoxys calcitrans SC-4-12-4... 182 1e-44
FN357436_19(FN357436|pid:none) Schistosoma mansoni genome sequen... 182 1e-44
FJ208978_1(FJ208978|pid:none) Gillichthys seta 40S ribosomal pro... 181 2e-44
AM048936_1(AM048936|pid:none) Carabus granulatus partial mRNA fo... 181 2e-44
BT077609_1(BT077609|pid:none) Lepeophtheirus salmonis Pacific fo... 180 4e-44
AY813734_1(AY813734|pid:none) Schistosoma japonicum SJCHGC01952 ... 180 4e-44
EZ000599_1(EZ000599|pid:none) TSA: Culex tarsalis Ctar-73 riboso... 179 8e-44
AM269955_121(AM269955|pid:none) Aspergillus niger contig An01c00... 178 1e-43
AY392169_1(AY392169|pid:none) Scyliorhinus canicula ribosomal pr... 178 1e-43
AP007155_793(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 176 9e-43
AY389954_1(AY389954|pid:none) Protopterus dolloi ribosomal prote... 174 3e-42
AY383664_1(AY383664|pid:none) Rattus norvegicus LRRGT00009 mRNA,... 174 3e-42
AY389953_1(AY389953|pid:none) Latimeria chalumnae ribosomal prot... 173 6e-42
CR954214_271(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 172 1e-41
(P25204) RecName: Full=40S ribosomal protein S8; &CT005263_207(... 172 1e-41
AM494961_216(AM494961|pid:none) Leishmania braziliensis chromoso... 171 3e-41
AY389970_1(AY389970|pid:none) Xenopus laevis ribosomal protein S... 169 9e-41
AC159405_33(AC159405|pid:none) Trypanosoma brucei chromosome 8 c... 167 3e-40
CP000883_79(CP000883|pid:none) Hemiselmis andersenii chromosome ... 164 3e-39
AL592166_7(AL592166|pid:none) Human DNA sequence from clone RP11... 160 4e-38
AK012562_1(AK012562|pid:none) Mus musculus 11 days embryo whole ... 159 1e-37
AB098931_1(AB098931|pid:none) Bos taurus mRNA for similar to rib... 159 1e-37
AX969987_1(AX969987|pid:none) Sequence 790 from Patent EP1104808. 159 1e-37
AK146303_1(AK146303|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 159 1e-37
AX969991_1(AX969991|pid:none) Sequence 794 from Patent EP1104808... 159 1e-37
AE014187_80(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 158 2e-37
AM910995_393(AM910995|pid:none) Plasmodium knowlesi strain H chr... 155 2e-36
AY226986_1(AY226986|pid:none) Schistosoma japonicum ribosomal pr... 153 5e-36
EZ000598_1(EZ000598|pid:none) TSA: Culex tarsalis Ctar-72 riboso... 150 4e-35
AJ315140_1(AJ315140|pid:none) Oncorhynchus mykiss partial mRNA f... 147 3e-34
AX972145_1(AX972145|pid:none) Sequence 2948 from Patent EP1104808. 130 3e-29
AY530951_2(AY530951|pid:none) Zea mays putative growth-regulatin... 126 6e-28
AJ010592_96(AJ010592|pid:none) Guillardia theta DNA for complete... 124 4e-27
EF123123_1(EF123123|pid:none) Saccharomyces cerevisiae strain BY... 120 3e-26
AL590442_86(AL590442|pid:none) chromosome II of strain GB-M1 of ... 119 1e-25
EU558338_1(EU558338|pid:none) Phoronis muelleri putative 40S rib... 116 9e-25
EU952720_1(EU952720|pid:none) Zea mays clone 1287132 unknown mRNA. 110 6e-23
AM048939_1(AM048939|pid:none) Scarabaeus laticollis partial mRNA... 109 8e-23
AY909420_1(AY909420|pid:none) Siniperca chuatsi clone C407 40S r... 95 3e-18
DQ158858_41(DQ158858|pid:none) Bigelowiella natans nucleomorph c... 82 2e-14
AX972128_1(AX972128|pid:none) Sequence 2931 from Patent EP110480... 74 4e-12
AY490756_1(AY490756|pid:none) Chironomus duplex RpS8 mRNA, parti... 69 1e-10
(A5UNB3) RecName: Full=30S ribosomal protein S8e; &CP000678_148... 62 2e-08
(P49402) RecName: Full=30S ribosomal protein S8e; AltName: Full=... 59 2e-07
(A0B8P7) RecName: Full=30S ribosomal protein S8e; &CP000477_126... 58 3e-07
(A6UWP2) RecName: Full=30S ribosomal protein S8e; &CP000743_132... 58 4e-07
AE017261_984(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 57 5e-07
AY810522_1(AY810522|pid:none) Schistosoma japonicum SJCHGC03085 ... 56 1e-06
BC005678_1(BC005678|pid:none) Homo sapiens, Similar to ribosomal... 56 1e-06
(O26309) RecName: Full=30S ribosomal protein S8e; &AE000666_204... 56 1e-06
(P61301) RecName: Full=30S ribosomal protein S8e; &AE017199_457... 55 2e-06
AF266243_1(AF266243|pid:none) Gillichthys mirabilis ribosomal pr... 55 3e-06
CP001398_647(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 54 4e-06
(Q976K3) RecName: Full=30S ribosomal protein S8e; &BA000023_203... 54 5e-06
(Q12UA1) RecName: Full=30S ribosomal protein S8e; &CP000300_195... 53 9e-06
(A3CSQ2) RecName: Full=30S ribosomal protein S8e; &CP000562_467... 53 9e-06
GM016639_205(GM016639|pid:none) Sequence 1469 from Patent EP1923... 52 2e-05
(A3DNX9) RecName: Full=30S ribosomal protein S8e; &CP000575_122... 52 2e-05
AF266170_1(AF266170|pid:none) Gillichthys mirabilis 40S ribosoma... 52 2e-05
(Q5JGF3) RecName: Full=30S ribosomal protein S8e; &AP006878_119... 52 2e-05
(Q465V4) RecName: Full=30S ribosomal protein S8e; &CP000099_334... 52 2e-05
(B6YTF2) RecName: Full=30S ribosomal protein S8e; &CP000855_356... 52 2e-05
CR936257_2387(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 51 4e-05
(Q9YDY0) RecName: Full=30S ribosomal protein S8e; &BA000002_552... 51 4e-05
(Q4JAP5) RecName: Full=30S ribosomal protein S8e; &CP000077_704... 50 6e-05
(Q8U1Y5) RecName: Full=30S ribosomal protein S8e; &AE009950_106... 50 8e-05
(A2BK08) RecName: Full=30S ribosomal protein S8e; &CP000493_438... 50 8e-05
(Q9UZL4) RecName: Full=30S ribosomal protein S8e; &AJ248286_189... 50 8e-05
(O58830) RecName: Full=30S ribosomal protein S8e; &BA000001_113... 49 1e-04
(P61300) RecName: Full=30S ribosomal protein S8e; &BX950229_165... 49 2e-04
(Q8TS82) RecName: Full=30S ribosomal protein S8e; &AE010299_902... 49 2e-04
(O28130) RecName: Full=30S ribosomal protein S8e; &AE000782_212... 48 4e-04
AJ305219_1(AJ305219|pid:none) Platichthys flesus partial mRNA fo... 48 4e-04
(A8AAJ7) RecName: Full=30S ribosomal protein S8e; &CP000816_765... 47 5e-04
(Q0W1L5) RecName: Full=30S ribosomal protein S8e; &AM114193_529... 47 6e-04
(A6VHS1) RecName: Full=30S ribosomal protein S8e; &CP000745_924... 47 6e-04
(Q2FU12) RecName: Full=30S ribosomal protein S8e; &CP000254_240... 47 6e-04
(A9A907) RecName: Full=30S ribosomal protein S8e; &CP000867_100... 47 8e-04
(Q18F55) RecName: Full=30S ribosomal protein S8e; &AM180088_238... 46 0.001
CP001365_1939(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 45 0.002
(A4G0R4) RecName: Full=30S ribosomal protein S8e; &CP000609_173... 44 0.004
CP001399_1975(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 44 0.007
CP001140_923(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 43 0.012
(Q980W3) RecName: Full=30S ribosomal protein S8e; &AE006641_143... 42 0.020
AM706409_1(AM706409|pid:none) Eristalis tenax partial mRNA for h... 41 0.035
(Q8TV55) RecName: Full=30S ribosomal protein S8e; &AE009439_154... 40 0.078
CP000866_516(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 40 0.078
(A4WLM9) RecName: Full=30S ribosomal protein S8e; &CP000660_167... 39 0.13
EU124999_1(EU124999|pid:none) Eurythoe complanata ribosomal prot... 39 0.13
(B1Y9T9) RecName: Full=30S ribosomal protein S8e; &CP001014_153... 39 0.23
BC151483_1(BC151483|pid:none) Bos taurus activating transcriptio... 33 9.4
T16344(T16344)hypothetical protein F42C5.1 - Caenorhabditis eleg... 33 9.4

>(Q54E24) RecName: Full=40S ribosomal protein S8;
Length = 211

Score = 357 bits (917), Expect = 2e-97
Identities = 185/214 (86%), Positives = 185/214 (86%)
Frame = +1

Query: 34 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFR 213
MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFR
Sbjct: 1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFR 60

Query: 214 ALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETH 393
ALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETH
Sbjct: 61 ALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETH 120

Query: 394 YXXXXXXXXXXXXXXEAEQVVXXXXXXXXXXXXRAKGRVLDSAIESQIGEGRFFARITSR 573
Y EAEQVV RAKGRVLDSAIESQIGEGRFFARITSR
Sbjct: 121 YGVVVGKKKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIGEGRFFARITSR 180

Query: 574 PGQVGKCDECDGYILEAKELEFYQRRLQKKKSAK 675
PGQVGK CDGYILEAKELEFYQRRLQKKKSAK
Sbjct: 181 PGQVGK---CDGYILEAKELEFYQRRLQKKKSAK 211

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,178,632,042
Number of extensions: 23635057
Number of successful extensions: 52014
Number of sequences better than 10.0: 168
Number of HSP's gapped: 51733
Number of HSP's successfully gapped: 193
Length of query: 248
Length of database: 1,051,180,864
Length adjustment: 125
Effective length of query: 123
Effective length of database: 646,610,989
Effective search space: 79533151647
Effective search space used: 79533151647
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.66 gvh: 0.28 alm: 0.52 top: 0.53 tms: 0.00 mit: 0.39 mip: 0.08
nuc: 0.23 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

68.0 %: nuclear
16.0 %: cytoplasmic
12.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U15461-1 is nuc

VS (DIR, S) 17
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 5
FC-IC (SUB) 0