Contig-U15457-1
Contig ID Contig-U15457-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15457-1 (Contig-U15457-1Q) /CSM_Contig/Contig-U15457-1Q.Seq.d
ATAACTATTAAAATATATATAAATACATAAAATGTCAAAGAATGGTGTAT
GGCAATTAAAAAAATTAGCAATTAATTATTGCGAATTTTCTGGAAGTAGT
AAATATGTAAGAAATATTTTAAACTCGAAAGTAGAAAAATTTAAAAGTGT
TAACCCACAAATCGAATTTGAATATAAGGTCAATCGTGGATCACACCCAT
ACTTAATAGCAACATATGAATCAGGAGTAACAAAAACTGTACCATTAAGA
GGTAGAACAGAAGAAAAAGTTTTAAAACATATTCAAAATCTTAAAGATAC
TTCAGGTGAAAAACCAAGAAAGTTTGGTGATAGATATATTTCTAAAACAG
AATCAATTCAAGGATTGTGGAATCCATTCATTAATTTTAGTAACAGTGAA
CAATAAATATAAATAAATAAACAAACAGAAAAAAAAAAAAAAAAAAACTT
TAGTAATATTAAAAAAAAAAAAAAAA

Gap no gap
Contig length 476
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 444919
End point 444444
Strand (PLUS/MINUS) MINUS
Number of clones 5
Number of EST 5
Link to clone list U15457
List of clone(s)

est1=VFG822F,1,476
est2=VSB810E,11,476
est3=VSD147F,11,438
est4=VSG474F,14,438
est5=FC-AR16E,44,430
Translated Amino Acid sequence
*llkyi*IHKMSKNGVWQLKKLAINYCEFSGSSKYVRNILNSKVEKFKSVNPQIEFEYKV
NRGSHPYLIATYESGVTKTVPLRGRTEEKVLKHIQNLKDTSGEKPRKFGDRYISKTESIQ
GLWNPFINFSNSEQ*i*inkqtekkkkknfsnikkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
itikiyint*nvkewcmaikkisn*llrifwk**ickkyfklesrki*kc*ptnri*i*g
qswitpilnsni*irsnknctikr*nrrksfktysks*ryfr*ktkkvw**iyf*nrins
rivesih*f**q*tinink*tnrkkkkkkl**y*kkkk


Frame B:
*llkyi*IHKMSKNGVWQLKKLAINYCEFSGSSKYVRNILNSKVEKFKSVNPQIEFEYKV
NRGSHPYLIATYESGVTKTVPLRGRTEEKVLKHIQNLKDTSGEKPRKFGDRYISKTESIQ
GLWNPFINFSNSEQ*i*inkqtekkkkknfsnikkkkk


Frame C:
ny*niykyikcqrmvygn*kn*qliianflevvnm*eif*trk*knlkvlthksnlnirs
ivdhtht**qhmnqe*qklyh*eveqkkkf*nifkilkilqvknqeslvidiflkqnqfk
dcgihslilvtvnnkyk*inkqkkkkkktlvilkkkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15457-1 (Contig-U15457-1Q)
/CSM_Contig/Contig-U15457-1Q.Seq.d
(476 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15457-1 (Contig-U15457-1Q) /CSM_Contig/Conti... 807 0.0
Contig-U04582-1 (Contig-U04582-1Q) /CSM_Contig/Conti... 42 8e-04
Contig-U16142-1 (Contig-U16142-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U15810-1 (Contig-U15810-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U14756-1 (Contig-U14756-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U14680-1 (Contig-U14680-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U14613-1 (Contig-U14613-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U12917-1 (Contig-U12917-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U08954-1 (Contig-U08954-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U06544-1 (Contig-U06544-1Q) /CSM_Contig/Conti... 40 0.003

>Contig-U15457-1 (Contig-U15457-1Q) /CSM_Contig/Contig-U15457-1Q.Seq.d
Length = 476

Score = 807 bits (407), Expect = 0.0
Identities = 421/428 (98%)
Strand = Plus / Plus


Query: 1 ataactattaaaatatatataaatacataaaatgtcaaagaatggtgtatggcaattnnn 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataactattaaaatatatataaatacataaaatgtcaaagaatggtgtatggcaattaaa 60


Query: 61 nnnnttagcaattaattattgcgaattttctggaagtagtaaatatgtaagaaatatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaattagcaattaattattgcgaattttctggaagtagtaaatatgtaagaaatatttt 120


Query: 121 aaactcgaaagtagaaaaatttaaaagtgttaacccacaaatcgaatttgaatataaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaactcgaaagtagaaaaatttaaaagtgttaacccacaaatcgaatttgaatataaggt 180


Query: 181 caatcgtggatcacacccatacttaatagcaacatatgaatcaggagtaacaaaaactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatcgtggatcacacccatacttaatagcaacatatgaatcaggagtaacaaaaactgt 240


Query: 241 accattaagaggtagaacagaagaaaaagttttaaaacatattcaaaatcttaaagatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accattaagaggtagaacagaagaaaaagttttaaaacatattcaaaatcttaaagatac 300


Query: 301 ttcaggtgaaaaaccaagaaagtttggtgatagatatatttctaaaacagaatcaattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaggtgaaaaaccaagaaagtttggtgatagatatatttctaaaacagaatcaattca 360


Query: 361 aggattgtggaatccattcattaattttagtaacagtgaacaataaatataaataaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggattgtggaatccattcattaattttagtaacagtgaacaataaatataaataaataa 420


Query: 421 acaaacag 428
||||||||
Sbjct: 421 acaaacag 428


>Contig-U04582-1 (Contig-U04582-1Q) /CSM_Contig/Contig-U04582-1Q.Seq.d
Length = 644

Score = 42.1 bits (21), Expect = 8e-04
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 15 atatataaatacataaaatgtcaaa 39
||||||| |||||||||||||||||
Sbjct: 190 atatatatatacataaaatgtcaaa 214


>Contig-U16142-1 (Contig-U16142-1Q) /CSM_Contig/Contig-U16142-1Q.Seq.d
Length = 1260

Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 402 aataaatataaataaataaa 421
||||||||||||||||||||
Sbjct: 158 aataaatataaataaataaa 177


Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 402 aataaatataaataaataaa 421
||||||||||||||||||||
Sbjct: 196 aataaatataaataaataaa 215


Score = 32.2 bits (16), Expect = 0.73
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 402 aataaatataaataaataaa 421
||||||||||||| ||||||
Sbjct: 140 aataaatataaatcaataaa 159


Score = 32.2 bits (16), Expect = 0.73
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 402 aataaatataaataaataaa 421
||||||| ||||||||||||
Sbjct: 126 aataaatttaaataaataaa 145


Score = 32.2 bits (16), Expect = 0.73
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 406 aatataaataaataaa 421
||||||||||||||||
Sbjct: 108 aatataaataaataaa 123


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,223
Number of Sequences: 8402
Number of extensions: 16223
Number of successful extensions: 3974
Number of sequences better than 10.0: 358
length of query: 476
length of database: 8,075,542
effective HSP length: 16
effective length of query: 460
effective length of database: 7,941,110
effective search space: 3652910600
effective search space used: 3652910600
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.27
Homology vs DNA
Query= Contig-U15457-1 (Contig-U15457-1Q) /CSM_Contig/Contig-U15457-1Q.Seq.d
(476 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ413094) Dictyostelium discoideum cDNA clone:ddv14l06, 5' ... 722 0.0 2
(AU262260) Dictyostelium discoideum vegetative cDNA clone:VS... 722 0.0 2
(AU263551) Dictyostelium discoideum vegetative cDNA clone:VS... 722 0.0 2
(AU266541) Dictyostelium discoideum vegetative cDNA clone:VS... 722 0.0 2
(C24331) Dictyostelium discoideum gamete cDNA, clone FC-AR16. 722 0.0 2
(AU266542) Dictyostelium discoideum vegetative cDNA clone:VS... 125 2e-24 1
(CT027742) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 4e-04 2
(AP001942) Homo sapiens genomic DNA, chromosome 4q22-q24, cl... 46 4e-04 6
(BX322643) Zebrafish DNA sequence from clone CH211-281E1 in ... 46 4e-04 2
(CV897533) PA054D6 mycelium, non-sporulating growth Phytopht... 40 6e-04 2
(CT025633) Pan troglodytes chromosome X clone RP43-007L03 ma... 40 8e-04 4
(CR926887) Zebrafish DNA sequence from clone DKEY-147L14 in ... 42 0.002 5
(AC154715) Mus musculus BAC clone RP24-361A22 from chromosom... 40 0.002 7
(BX530078) Zebrafish DNA sequence from clone DKEYP-88A5 in l... 40 0.003 6
(AU270309) Dictyostelium discoideum vegetative cDNA clone:VS... 40 0.003 3
(AU263240) Dictyostelium discoideum vegetative cDNA clone:VS... 40 0.003 3
(AU270308) Dictyostelium discoideum vegetative cDNA clone:VS... 40 0.003 3
(BX085194) Zebrafish DNA sequence from clone DKEY-242M13 in ... 46 0.004 5
(FC684396) CAXX17615.rev CAXX Lottia gigantea from male gona... 54 0.005 1
(AL929176) Zebrafish DNA sequence from clone XX-187G17 in li... 42 0.005 4
(CR931815) Zebrafish DNA sequence from clone DKEY-225L23 in ... 42 0.006 5
(CR759968) Zebrafish DNA sequence from clone CH211-198N5 in ... 44 0.007 2
(ED066473) AUAC-aax05c09.g1 Ascaris suum whole genome shotgu... 38 0.009 2
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 42 0.010 9
(C92396) Dictyostelium discoideum slug cDNA, clone SSE751. 40 0.010 3
(AL035476) Plasmodium falciparum MAL4P3. 42 0.010 6
(AC204341) Rhesus Macaque BAC CH250-480G14 () complete sequ... 34 0.011 8
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 44 0.013 8
(AC176123) Strongylocentrotus purpuratus clone R3-3023C18, W... 44 0.014 3
(DE617201) Bombyx mori genomic DNA, Fosmid clone:GBMFno355_f... 38 0.014 2
(AC163918) Bos taurus clone CH240-149O21, *** SEQUENCING IN ... 48 0.016 4
(AC114787) Homo sapiens BAC clone RP11-642C3 from 4, complet... 46 0.016 3
(CU207276) Zebrafish DNA sequence from clone DKEY-18H3. 40 0.017 7
(CU582959) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.017 9
(BX294444) Zebrafish DNA sequence from clone CH211-281E15 in... 44 0.018 3
(CT954280) Mouse DNA sequence from clone RP23-312K1 on chrom... 52 0.019 1
(AC157353) Mus musculus BAC clone RP24-236H23 from chromosom... 52 0.019 1
(AC149248) Otolemur garnettii clone CH256-551N12, WORKING DR... 52 0.019 1
(AC126993) Rattus norvegicus clone CH230-296M11, *** SEQUENC... 52 0.019 1
(AC112301) Rattus norvegicus clone CH230-63O15, *** SEQUENCI... 52 0.019 1
(CU694224) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.019 1
(CU407024) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.019 1
(AC220863) Bos taurus clone CH240-343B6, WORKING DRAFT SEQUE... 52 0.019 1
(DN057549) JGI_CABA10492.fwd NIH_XGC_tropKid1 Xenopus (Silur... 52 0.019 1
(FE092452) LV_GL_RA44D06r Litopenaeus vannamei gills cDNA li... 38 0.020 3
(DE616419) Bombyx mori genomic DNA, Fosmid clone:GBMFno354_e... 38 0.020 2
(CT009676) Zebrafish DNA sequence from clone CH73-390A17 in ... 44 0.022 3
(AM486964) Vitis vinifera contig VV78X180381.19, whole genom... 42 0.023 4
(FE161647) LV_LO_RA030C17r Litopenaeus vannamei lymphoid org... 38 0.023 3
(FE161609) LV_LO_RA030E09r Litopenaeus vannamei lymphoid org... 38 0.023 3
(AC204239) Macaca mulatta clone CH250-490F20, WORKING DRAFT ... 50 0.024 2
(CU274314) Equus caballus GSS, BAC clone CH241-430M13, SP6 e... 46 0.024 2
(AC224366) Bos taurus clone CH240-486L5, WORKING DRAFT SEQUE... 42 0.026 4
(AL034558) Plasmodium falciparum MAL3P2. 40 0.027 8
(AL844507) Plasmodium falciparum chromosome 8. 40 0.030 5
(AL844509) Plasmodium falciparum chromosome 13. 42 0.030 5
(AP005360) Homo sapiens genomic DNA, chromosome 8q23, clone:... 38 0.032 6
(AC112567) Rattus norvegicus clone CH230-7M6, *** SEQUENCING... 44 0.032 3
(AM669062) Entamoeba terrapinae GSS, clone terra150c04.q1k. 38 0.033 2
(AC095564) Rattus norvegicus clone CH230-7G15, WORKING DRAFT... 44 0.033 3
(CR354603) Zebrafish DNA sequence from clone CH211-106J11 in... 40 0.034 5
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 34 0.036 6
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35... 32 0.037 8
(CR936327) Medicago truncatula chromosome 5 clone mte1-68g1,... 38 0.039 5
(CR931958) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 0.041 6
(AC117410) Homo sapiens chromosome 3 clone RP11-57O17, *** S... 40 0.048 5
(CU896634) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 0.049 5
(AP003038) Homo sapiens genomic DNA, chromosome 11 clone:CTD... 42 0.051 5
(AC191976) Rhesus Macaque BAC CH250-555A20 () complete sequ... 36 0.057 4
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 34 0.059 9
(BX511251) Zebrafish DNA sequence from clone CH211-222O13 in... 44 0.062 3
(EY338841) CAWY9282.rev CAWY Helobdella robusta Subtracted E... 38 0.064 2
(BX284691) Zebrafish DNA sequence from clone CH211-224J19 in... 44 0.066 3
(AX281160) Sequence 25 from Patent WO0177377. 42 0.066 2
(AR453048) Sequence 25 from patent US 6677731. 42 0.066 2
(CR631124) Zebrafish DNA sequence from clone DKEY-52E24 in l... 36 0.066 6
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 34 0.070 5
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 0.071 9
(AX344565) Sequence 16 from Patent WO0200932. 38 0.073 9
(AC005081) Homo sapiens BAC clone CTA-270D13 from 7, complet... 50 0.075 1
(AC005015) Homo sapiens BAC clone GS1-166C5 from 7q11.23-q21... 50 0.075 1
(AC004089) Homo sapiens Chromosome 7 BAC Clone 155b01, compl... 50 0.075 1
(AC002347) Homo sapiens chromosome 17, clone CTC-297N7, comp... 50 0.075 1
(AC122946) Rattus norvegicus clone CH230-280K6, WORKING DRAF... 50 0.075 1
(CU467762) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.075 1
(CE836908) tigr-gss-dog-17000332592860 Dog Library Canis lup... 50 0.075 1
(AL666833) Ciona intestinalis; larval mRNA; EST 5PRIM end of... 50 0.075 1
(EX641339) 256637947 Pea aphid whole body normalized full le... 50 0.075 1
(AF292384) Plasmodium falciparum cAMP-dependent protein kina... 38 0.079 2
(AC192313) Atelerix albiventris clone LB4-505D4, WORKING DRA... 44 0.082 2
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 40 0.083 6
(AC183115) Bos taurus clone CH240-245J18, WORKING DRAFT SEQU... 44 0.083 2
(AC200519) Pongo abelii BAC clone CH276-316G22 from chromoso... 36 0.083 5
(CU633173) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.084 3
(AC091563) Homo sapiens chromosome 8, clone RP11-760H22, com... 38 0.087 3
(AY252742) Anischys sp. WCW-2003 16S ribosomal RNA gene, par... 46 0.088 2
(AC111825) Rattus norvegicus clone CH230-272C3, *** SEQUENCI... 38 0.089 3
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 34 0.093 6
(AL453157) T. brucei sheared genomic DNA clone 23f04, forwar... 42 0.093 2
(EY336642) CAWY7820.rev CAWY Helobdella robusta Subtracted E... 38 0.094 2
(CV946518) PV020C5 zoospores, purified Phytophthora infestan... 40 0.094 2
(AC140306) Mus musculus BAC clone RP23-386L13 from 8, comple... 46 0.098 3
(CT025880) Mouse DNA sequence from clone RP23-266N10 on chro... 40 0.100 6
(AC104561) Homo sapiens chromosome 8, clone CTC-756D1, compl... 44 0.100 5
(CT978957) Zebrafish DNA sequence from clone DKEY-204G14 in ... 38 0.10 4
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 42 0.11 7
(CE721106) tigr-gss-dog-17000315144723 Dog Library Canis lup... 46 0.11 2
(CR556713) Zebrafish DNA sequence from clone DKEY-28O14 in l... 36 0.11 5
(AC103015) Rattus norvegicus clone CH230-85M7, *** SEQUENCIN... 42 0.11 3
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 42 0.11 7
(BX127100) Danio rerio genomic clone DKEY-74E17, genomic sur... 46 0.11 2
(CU571376) Zebrafish DNA sequence from clone CH211-253P14 in... 44 0.11 3
(AL035475) Plasmodium falciparum MAL4P2. 40 0.12 5
(AC004710) Plasmodium falciparum chromosome 12, *** SEQUENCI... 44 0.12 5
(CT734023) Danio rerio EST, clone ZF_mu_215k15 3'. 40 0.12 2
(BX511014) Zebrafish DNA sequence from clone CH211-143E20 in... 44 0.12 6
(CV949020) PVrpvb_12975 zoospores, purified Phytophthora inf... 40 0.12 2
(AM636933) Entamoeba dispar GSS, clone dispar42a11.q1k. 36 0.13 2
(BX510305) Zebrafish DNA sequence from clone CH211-107P11 in... 44 0.13 6
(CS468876) Sequence 67 from Patent EP1748080. 40 0.13 4
(CS419353) Sequence 67 from Patent WO2006094836. 40 0.13 4
(AL844899) Zebrafish DNA sequence from clone CH211-287K8 in ... 38 0.13 5
(DY888249) CeleSEQ5052 Cunninghamella elegans pBluescript (E... 40 0.13 2
(AC115444) Rattus norvegicus clone CH230-81E1, *** SEQUENCIN... 40 0.13 2
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 36 0.13 5
(BX649314) Zebrafish DNA sequence from clone DKEYP-111A3 in ... 38 0.13 5
(BX248513) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.14 4
(AF126719) Plasmodium falciparum cAMP-dependent protein kina... 38 0.14 2
(AC011059) Homo sapiens chromosome 18, clone RP11-11F23, com... 38 0.15 4
(CR854887) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 0.15 6
(AM467611) Vitis vinifera contig VV78X044653.4, whole genome... 44 0.16 2
(AM461349) Vitis vinifera contig VV78X244708.13, whole genom... 42 0.17 3
(AC137295) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 38 0.17 3
(CU694384) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.18 2
(CR932078) Zebrafish DNA sequence from clone DKEY-16O23 in l... 38 0.18 5
(DQ366716) Uncultured Prochlorococcus marinus clone ASNC2388... 44 0.20 3
(AY894835) Phytophthora infestans haplotype Ia mitochondrion... 40 0.20 3
(U17009) Phytophthora infestans mitochondrion, complete genome. 40 0.20 3
(CU928189) Zebrafish DNA sequence from clone CH1073-432A18 i... 36 0.20 3
(BX927101) Zebrafish DNA sequence from clone CH211-120F16 in... 44 0.20 3
(CU694269) Zebrafish DNA sequence from clone CH73-169F6 in l... 40 0.20 4
(AY898628) Phytophthora infestans haplotype IIb mitochondrio... 40 0.22 3
(AY898627) Phytophthora infestans haplotype IIa mitochondrio... 40 0.22 3
(AL031746) Plasmodium falciparum DNA from MAL1P3. 40 0.23 5
(AX346142) Sequence 1213 from Patent WO0200928. 42 0.23 3
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 42 0.24 12
(BX936334) Zebrafish DNA sequence from clone DKEY-117L19 in ... 42 0.24 4
(AC135683) Rattus norvegicus clone CH230-333A12, *** SEQUENC... 38 0.25 3
(BX296527) Zebrafish DNA sequence from clone DKEYP-32C3 in l... 44 0.25 3
(AC137466) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 38 0.26 3
(CE522024) tigr-gss-dog-17000365656723 Dog Library Canis lup... 40 0.27 2
(AY895830) Homo sapiens flavin containing monooxygenase 3 (F... 40 0.27 2
(AC160136) Mus musculus BAC clone RP23-125E11 from chromosom... 42 0.27 3
(CR936260) Zebrafish DNA sequence from clone DKEY-16H22 in l... 40 0.27 5
(AC188018) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 40 0.28 3
(AL008631) Human DNA sequence from clone RP1-292F10 on chrom... 38 0.29 4
(AJ298660) Pemphigus spyrothecae mitochondrial ATP6 gene for... 34 0.29 3
(CU138554) Zebrafish DNA sequence from clone DKEY-201H12. 48 0.30 1
(CR847540) Zebrafish DNA sequence from clone CH211-59K6 in l... 48 0.30 1
(CR759424) Zebrafish DNA sequence from clone DKEY-100G2 in l... 48 0.30 1
(BX664626) Zebrafish DNA sequence from clone CH211-266O3 in ... 48 0.30 1
(BX511256) Zebrafish DNA sequence from clone DKEY-58M10 in l... 48 0.30 1
(AL731678) Mouse DNA sequence from clone RP23-39H12 on chrom... 48 0.30 1
(AC153647) Mus musculus BAC clone RP24-396E16 from chromosom... 48 0.30 1
(AC126024) Mus musculus BAC clone RP24-423I20 from chromosom... 48 0.30 1
(AC152893) Saimiri boliviensis boliviensis clone CH254-211C3... 48 0.30 1
(AP006130) Lotus japonicus genomic DNA, chromosome 3, clone:... 48 0.30 1
(AM428028) Vitis vinifera contig VV78X180553.3, whole genome... 48 0.30 1
(AL390239) Human DNA sequence from clone RP11-58J3 on chromo... 48 0.30 1
(AC073572) Homo sapiens 12 BAC RP5-901N10 (Roswell Park Canc... 48 0.30 1
(AC005844) Homo sapiens 12 BAC RP11-350L7 (Roswell Park Canc... 48 0.30 1
(AC157842) Meleagris gallopavo clone CH260-59P6, WORKING DRA... 48 0.30 1
(AC152897) Meleagris gallopavo clone CH260-25G16, WORKING DR... 48 0.30 1
(AC149437) Saimiri boliviensis boliviensis clone CH254-443I1... 48 0.30 1
(AC128287) Rattus norvegicus clone CH230-387K4, WORKING DRAF... 48 0.30 1
(CU928559) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.30 1
(AC091314) Mus musculus clone RP23-57B2, WORKING DRAFT SEQUE... 48 0.30 1
(CU466465) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.30 1
(CU302440) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.30 1
(CU302438) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.30 1
(CT737153) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.30 1
(AC224919) Bos taurus clone CH240-473A16, WORKING DRAFT SEQU... 48 0.30 1
(AC171764) Atelerix albiventris clone LB4-493J1, WORKING DRA... 48 0.30 1
(AC167060) Bos taurus clone CH240-178F24, WORKING DRAFT SEQU... 48 0.30 1
(DX956140) CHORI105-3O1.TJ CHORI105.pTARBAC1.3 Trypanosoma c... 48 0.30 1
(DE350251) Bombyx mori genomic DNA, BAC clone:BET_063_M09. 48 0.30 1
(CW976974) AIAA-aab88h02.b1 Ancylostoma caninum whole genome... 48 0.30 1
(BG561701) EtESTed99a09.y1 Eimeria tenella S5-2 cDNA Neg Sel... 48 0.30 1
(FP015899) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.30 6
(CT027741) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.30 3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 40 0.30 6
(AC068762) Homo sapiens 3 BAC RP11-215N17 (Roswell Park Canc... 38 0.30 5
(BX000447) Zebrafish DNA sequence from clone DKEY-157O17 in ... 34 0.30 4
(BX296519) Zebrafish DNA sequence from clone CH211-278N7 in ... 46 0.30 3
(CR936542) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.30 7
(AC152182) Mus musculus chromosome 16 clone RP23-122E6, WORK... 38 0.31 5
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 44 0.31 6
(EY326884) CAWY11885.rev CAWY Helobdella robusta Subtracted ... 38 0.31 2
(AC012137) Homo sapiens clone RP11-10J5, WORKING DRAFT SEQUE... 44 0.32 2
(AM426904) Vitis vinifera contig VV78X251901.13, whole genom... 32 0.32 5
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 44 0.32 7
(FP016180) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.33 5
(AC131224) Rattus norvegicus clone CH230-154I12, *** SEQUENC... 36 0.33 6
(AC124430) Mus musculus BAC clone RP24-239O11 from chromosom... 46 0.34 2
(BX927322) Zebrafish DNA sequence from clone CH211-101J8 in ... 38 0.34 5
(ET917963) CHO_OF319xo19r1.ab1 CHO_OF Nicotiana tabacum geno... 32 0.35 3
(AC190068) Cavia porcellus clone CH234-118A4, WORKING DRAFT ... 38 0.36 6
(CB887337) Lice_03_P16_T3 Body louse cDNA library Pediculus ... 36 0.37 2
(AC110856) Rattus norvegicus clone CH230-172A6, *** SEQUENCI... 44 0.37 4
(AC182531) Oryctolagus cuniculus clone LB1-89F2, WORKING DRA... 42 0.37 4
(CU024872) Zebrafish DNA sequence from clone DKEY-58J5 in li... 38 0.38 3
(CT027703) Zebrafish DNA sequence from clone CH211-268L2 in ... 34 0.39 7
(BX218216) Danio rerio genomic clone DKEY-263E17, genomic su... 38 0.39 2
(AM489401) Vitis vinifera contig VV78X143723.2, whole genome... 38 0.40 2
(D31785) Pichia canadensis mitochondrial genomic DNA, comple... 38 0.40 3
(BJ097040) Xenopus laevis cDNA clone:XL173b03, 5' end, singl... 42 0.41 2
(CU929133) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.41 3
(AC093260) Homo sapiens chromosome 5 clone RP11-237B16, comp... 40 0.41 5
(AC128311) Rattus norvegicus clone CH230-254L18, WORKING DRA... 44 0.42 2
(AM477786) Vitis vinifera contig VV78X271727.4, whole genome... 42 0.42 2
(AE001399) Plasmodium falciparum 3D7 chromosome 2 section 36... 40 0.42 2
(BX890567) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.43 4
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 40 0.43 8
(AL109814) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 40 0.43 5
(AP006241) Homo sapiens genomic DNA, chromosome 3, clone:RP1... 34 0.44 5
(AC092804) Homo sapiens chromosome 1 clone RP11-81E23, compl... 34 0.44 6
(AC128371) Rattus norvegicus clone CH230-159L10, WORKING DRA... 44 0.44 2
(AC189376) Brassica rapa subsp. pekinensis clone KBrB048M01,... 42 0.44 3
(CU862014) Zebrafish DNA sequence from clone CH211-242K17 in... 36 0.44 4
(CT990570) Zebrafish DNA sequence from clone DKEY-13A11 in l... 40 0.44 3
(CR382341) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.46 4
(AC102973) Rattus norvegicus clone CH230-75L22, WORKING DRAF... 40 0.46 2
(CR762410) Zebrafish DNA sequence from clone DKEYP-86A11 in ... 36 0.46 5
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2... 40 0.46 5
(DT113650) JGI_ANNO2721.rev ANNO Pimephales promelas Whole (... 40 0.46 2
(DT168031) JGI_ANNO40620.rev ANNO Pimephales promelas Whole ... 40 0.47 2
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 44 0.47 5
(CU582850) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.47 5
(AM454280) Vitis vinifera contig VV78X038260.4, whole genome... 42 0.48 2
(AM022043) Bos sp. 5' EST, clone C0007398i13. 36 0.48 2
(AC095800) Rattus norvegicus clone CH230-9G4, *** SEQUENCING... 40 0.49 2
(AC114298) Homo sapiens chromosome 5 clone RP11-12C2, comple... 42 0.49 4
(DT290048) JGI_CAAW2860.rev CAAW Pimephales promelas testis ... 40 0.52 2
(CR627485) Zebrafish DNA sequence from clone DKEY-203E10 in ... 40 0.52 5
(BX640579) Zebrafish DNA sequence from clone CH211-266K5 in ... 44 0.52 6
(CS468875) Sequence 66 from Patent EP1748080. 40 0.52 3
(CS419352) Sequence 66 from Patent WO2006094836. 40 0.52 3
(BX293540) Zebrafish DNA sequence from clone DKEY-255N2 in l... 38 0.52 5
(AC124017) Homo sapiens BAC clone RP11-317M11 from 4, comple... 42 0.53 3
(CR848664) Zebrafish DNA sequence from clone CH211-169I9 in ... 42 0.54 3
(BX890603) Zebrafish DNA sequence from clone DKEYP-19G9 in l... 34 0.56 5
(AC180622) Strongylocentrotus purpuratus clone R3-3092H10, W... 40 0.56 3
(BX511196) Zebrafish DNA sequence from clone RP71-14I8 in li... 40 0.57 3
(AC020713) Homo sapiens BAC clone RP11-439B18 from 4, comple... 38 0.58 5
(AC187573) Rhesus macaque BAC clone CH250-29H12 from chromos... 40 0.58 4
(BX936364) Zebrafish DNA sequence from clone CH211-247G11 in... 38 0.59 3
(AE001384) Plasmodium falciparum 3D7 chromosome 2 section 21... 38 0.61 2
(AC021985) Homo sapiens clone RP11-3H20, WORKING DRAFT SEQUE... 42 0.61 3
(AC102454) Mus musculus chromosome 5, clone RP24-296L13, com... 44 0.61 3
(BX649308) Zebrafish DNA sequence from clone CH211-223K15 in... 32 0.62 7
(AC135813) Rattus norvegicus clone CH230-337P15, WORKING DRA... 46 0.63 3
(AC213916) Populus trichocarpa clone ACSB1929-M19, complete ... 44 0.63 3
(AE001383) Plasmodium falciparum 3D7 chromosome 2 section 20... 38 0.64 4
(AC004911) Homo sapiens PAC clone RP5-870F17 from 7, complet... 40 0.65 3
(AC147679) Canis Familiaris, clone XX-10F3, complete sequence. 40 0.65 5
(CU694812) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.66 3
(AL844506) Plasmodium falciparum chromosome 7. 38 0.66 6
(CR354554) Zebrafish DNA sequence from clone CH211-207B16 in... 32 0.66 2
(CU856560) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 0.67 6
(CU929409) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.68 2
(FP085556) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.68 5
(CR846083) Zebrafish DNA sequence from clone DKEYP-34A6 in l... 44 0.70 3
(CR762483) Zebrafish DNA sequence from clone DKEY-112K13 in ... 38 0.71 3
(CU041344) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 0.73 6
(AC158455) Rhinolophus ferrumequinum clone VMRC7-126A9, WORK... 42 0.73 3
(AL806519) Mouse DNA sequence from clone RP23-172A2 on chrom... 40 0.73 5
(AX345526) Sequence 597 from Patent WO0200928. 32 0.73 5
(AC149594) Xenopus (Silurana) tropicalis chromosome CH216-62... 44 0.74 3
(CT868700) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.74 3
(BV814214) pRRL2:Newb:20080411:190816 USMARC Pig Breed SNP D... 38 0.74 2
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 32 0.75 9
(AL807376) Mouse DNA sequence from clone RP23-436K3 on chrom... 38 0.75 5
(AE001375) Plasmodium falciparum 3D7 chromosome 2 section 12... 38 0.76 3
(AC123981) Pan troglodytes clone rp43-130h22, complete seque... 44 0.76 4
(B89771) CIT-HSP-2170F8.TR CIT-HSP Homo sapiens genomic clon... 34 0.76 2
(AC010206) Homo sapiens 12 BAC RP11-13G14 (Roswell Park Canc... 38 0.77 3
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 40 0.78 6
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 38 0.78 6
(BX322792) Zebrafish DNA sequence from clone CH211-261I17. 38 0.79 3
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 40 0.79 6
(AC073065) Homo sapiens BAC clone RP11-149O3 from 2, complet... 36 0.79 4
(AP002421) Homo sapiens genomic DNA, chromosome 18q22 clone:... 40 0.81 4
(AC156683) Bos taurus clone CH240-61A20, WORKING DRAFT SEQUE... 40 0.81 5
(AC118072) Rattus norvegicus clone CH230-350A21, *** SEQUENC... 38 0.82 2
(AC023884) Homo sapiens chromosome 5 clone RP11-370B10, WORK... 40 0.82 4
(CU929426) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.82 2
(BX173731) Danio rerio genomic clone DKEY-179J21, genomic su... 32 0.83 2
(AC219434) Bos taurus clone CH240-340D10, WORKING DRAFT SEQU... 40 0.84 4
(AC200457) Pan troglodytes BAC clone CH251-388C2 from chromo... 40 0.85 3
(ET686833) CHO_OF356xe07f1.ab1 CHO_OF Nicotiana tabacum geno... 32 0.85 2
(AL158160) Human DNA sequence from clone RP11-165O3 on chrom... 40 0.86 2
(CT027780) Zebrafish DNA sequence from clone CH211-253P11 in... 38 0.86 4
(AL049180) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 38 0.87 6
(AC186685) Canis Familiaris chromosome 14, clone XX-296J21, ... 38 0.87 6
(AC132522) Rattus norvegicus clone CH230-514H5, *** SEQUENCI... 38 0.87 3
(BD453066) Diagnosis of Diseases Associated with tumor suppr... 34 0.88 6
(AX251545) Sequence 513 from Patent WO0168912. 34 0.88 6
(BX088553) Mouse DNA sequence from clone RP23-115D24 on chro... 38 0.88 5
(AC154615) Mus musculus BAC clone RP23-257K8 from chromosome... 38 0.88 4
(CU640411) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.88 3
(CU929259) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.88 3
(CU041382) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.88 4
(DJ050980) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 36 0.88 2
(DI106032) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 36 0.88 2
(CS083838) Sequence 21 from Patent WO2005040377. 36 0.88 2
(BD221854) Nucleic sequence and deduced protein sequence fam... 46 0.90 3
(AX008040) Sequence 63 from Patent WO9967395. 46 0.90 3
(AR699803) Sequence 63 from patent US 6919438. 46 0.90 3
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 40 0.90 8
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 44 0.92 5
(AC126407) Homo sapiens chromosome 15, clone RP11-73C9, comp... 42 0.93 5
(AC192321) Spermophilus tridecemlineatus clone VMRC20-323G1,... 38 0.93 5
(CT573024) Mouse DNA sequence from clone RP23-366F9 on chrom... 38 0.94 4
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.94 9
(CU633479) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.94 3
(AC231206) Tupaia belangeri clone CH275-39O11, WORKING DRAFT... 42 0.96 2
(CU927970) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 0.96 6
(CR293518) Zebrafish DNA sequence from clone CH211-129L10 in... 40 0.96 3
(CU468249) S.lycopersicum DNA sequence from clone LE_HBa-94K... 42 0.98 4
(BX927062) Zebrafish DNA sequence from clone CH211-227N20 in... 40 0.99 5
(CT025604) Mouse DNA sequence from clone RP23-332P8 on chrom... 38 1.00 3
(AC208381) Pan troglodytes BAC clone CH251-707A4 from chromo... 34 1.0 6
(AL034559) Plasmodium falciparum MAL3P7. 40 1.0 7
(C93244) Dictyostelium discoideum slug cDNA, clone SSM868. 38 1.0 2
(AC120867) Mus musculus chromosome 5, clone RP23-91O14, comp... 44 1.0 3
(CR376801) Zebrafish DNA sequence from clone CH211-13K18 in ... 38 1.0 7
(CR759738) Human DNA sequence from clone XX-NCIH2171_16J17. 34 1.0 5
(EU877950) Sphaerius sp. BT0074 mitochondrion, complete genome. 28 1.0 6
(AL034560) Plasmodium falciparum MAL3P8. 38 1.0 5
(AC125028) Mus musculus chromosome 16, clone RP24-85G10, com... 40 1.0 6
(AC141894) Mus musculus chromosome UNK clone RP23-273G12, WO... 36 1.0 4
(CT027567) Zebrafish DNA sequence from clone DKEY-31E3 in li... 34 1.1 7
(AL008970) Plasmodium falciparum MAL3P4. 40 1.1 6
(BD428843) Method and nucleic acids for pharmacogenomic meth... 38 1.1 3
(AX348322) Sequence 17 from Patent WO0202806. 38 1.1 3
(AX345120) Sequence 191 from Patent WO0200928. 38 1.1 3
(CT025647) Zebrafish DNA sequence from clone CH211-173P13 in... 36 1.1 6
(CU655988) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.1 4
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 40 1.1 6
(AC154216) Mus musculus BAC clone RP24-354I21 from 13, compl... 40 1.1 3
(CU856657) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 1.1 4
(AC025566) Homo sapiens 3 BAC RP11-501O2 (Roswell Park Cance... 40 1.1 4
(AC216419) Populus trichocarpa clone POP072-N07, complete se... 36 1.1 5
(BX248240) Zebrafish DNA sequence from clone CH211-162I19 in... 36 1.1 6
(AZ377019) 1M0131G08F Mouse 10kb plasmid UUGC1M library Mus ... 40 1.1 2
(AC214253) Macaca mulatta clone CH250-541O8, *** SEQUENCING ... 38 1.1 2
(BX323994) Zebrafish DNA sequence from clone CH211-273A5 in ... 38 1.1 6
(AC099414) Mus musculus BAC clone RP23-122C18 from 3, comple... 40 1.1 4
(FD059737) CBPO6061.b1 CBPO: Normalized channel catfish cDNA... 34 1.1 2
(AC136457) Mus musculus BAC clone RP23-76G19 from chromosome... 38 1.1 4
(AC175229) Atelerix albiventris clone LB4-96D8, WORKING DRAF... 44 1.1 2
(BX508528) Homo sapiens mRNA; EST DKFZp686C14271_r1 (from c... 34 1.2 2
(BK000438) TPA_exp: Homo sapiens RING finger protein COP1 ge... 36 1.2 7
(AL390039) Human DNA sequence from clone RP13-383K5 on chrom... 42 1.2 5
(AC170584) Mus musculus chromosome 1, clone RP24-360E22, com... 38 1.2 5
(AL355988) Human DNA sequence from clone RP5-1182H6 on chrom... 40 1.2 3
(CU861508) Zebrafish DNA sequence from clone CH73-132F6 in l... 46 1.2 1
(CT990606) Zebrafish DNA sequence from clone CH211-271L9 in ... 46 1.2 1
(CT737151) Zebrafish DNA sequence from clone CH211-253B1 in ... 46 1.2 1
(CR927479) Zebrafish DNA sequence from clone CH73-111B21. 46 1.2 1
(CR847945) Zebrafish DNA sequence from clone DKEY-52L1. 46 1.2 1
(CR407592) Zebrafish DNA sequence from clone DKEY-166N5. 46 1.2 1
(CR392004) Zebrafish DNA sequence from clone CH211-165H11 in... 46 1.2 1
(BX649494) Zebrafish DNA sequence from clone DKEY-173J18 in ... 46 1.2 1
(BX649250) Zebrafish DNA sequence from clone DKEY-53B2 in li... 46 1.2 1
(BX572619) Zebrafish DNA sequence from clone DKEY-167J6 in l... 46 1.2 1
(BX571880) Zebrafish DNA sequence from clone DKEY-29L4 in li... 46 1.2 1
(BX546474) Zebrafish DNA sequence from clone DKEY-120L3 in l... 46 1.2 1
(BX322795) Zebrafish DNA sequence from clone CH211-106E12 in... 46 1.2 1
(BX004834) Zebrafish DNA sequence from clone CH211-42E22 in ... 46 1.2 1
(AL929518) Zebrafish DNA sequence from clone CH211-163F10 in... 46 1.2 1
(BV535956) G591P630754FG11.T0 Clint Pan troglodytes verus ST... 46 1.2 1
(BV527264) G591P611541RC11.T0 Clint Pan troglodytes verus ST... 46 1.2 1
(BV523124) G591P600688FA12.T0 Clint Pan troglodytes verus ST... 46 1.2 1
(BV520472) G591P64507RC2.T0 Clint Pan troglodytes verus STS ... 46 1.2 1
(AL844855) Mouse DNA sequence from clone RP23-113K9 on chrom... 46 1.2 1
(AL596386) Mouse DNA sequence from clone RP23-331I21 on chro... 46 1.2 1
(AC162613) Mus musculus chromosome 19, clone RP24-270E10, co... 46 1.2 1
(AC156290) Mus musculus 6 BAC RP24-267I24 (Roswell Park Canc... 46 1.2 1
(AC152454) Mus musculus BAC clone RP24-100N16 from 18, compl... 46 1.2 1
(AC147184) Mus musculus BAC clone RP24-286F20 from 1, comple... 46 1.2 1
(AC139351) Mus musculus BAC clone RP24-156K15 from 8, comple... 46 1.2 1
(AC132410) Mus musculus BAC clone RP23-348E10 from 8, comple... 46 1.2 1
(AC111048) Mus musculus chromosome 19, clone RP23-355N22, co... 46 1.2 1
(AC044805) Mus musculus strain C57BL6/J chromosome 5 clone R... 46 1.2 1
(BS000111) Pan troglodytes chromosome 22 clone:PTB-093K04, m... 46 1.2 1
(AC192012) Rhesus Macaque BAC CH250-325M9 () complete seque... 46 1.2 1
(AC190188) Pan troglodytes BAC clone CH251-584O14 from chrom... 46 1.2 1
(AC149133) Pan troglodytes chromosome X clone RP43-010O16 ma... 46 1.2 1
(AM446791) Vitis vinifera contig VV78X113418.7, whole genome... 46 1.2 1
(AM436537) Vitis vinifera contig VV78X219952.8, whole genome... 46 1.2 1
(AM436218) Vitis vinifera contig VV78X236993.3, whole genome... 46 1.2 1
(AC216681) Populus trichocarpa clone POP023-F05, complete se... 46 1.2 1
(AC182682) Populus trichocarpa clone Pop1-33J5, complete seq... 46 1.2 1
(DL063382) Cancer Gene Determination and Therapeutic Screeni... 46 1.2 1
(DL060968) Cancer Gene Determination and Therapeutic Screeni... 46 1.2 1
(CS350756) Sequence 140 from Patent WO2006013561. 46 1.2 1
(AX331986) Sequence 2495 from Patent WO0194629. 46 1.2 1
(AX329572) Sequence 81 from Patent WO0194629. 46 1.2 1
(CT961054) Pig DNA sequence from clone CH242-15K4 on chromos... 46 1.2 1
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 46 1.2 1
(AC206110) Saccoglossus kowalevskii BAC CUGI_SK_BA 001B1 (C... 46 1.2 1
(U07563) Human proto-oncogene tyrosine-protein kinase (ABL) ... 46 1.2 1
(DQ145721) Homo sapiens v-abl Abelson murine leukemia viral ... 46 1.2 1
(AL359633) Human DNA sequence from clone RP11-795J1 on chrom... 46 1.2 1
(AL161733) Human DNA sequence from clone RP11-83J21 on chrom... 46 1.2 1
(AF196779) Homo sapiens chromosome X multiple clones map p11... 46 1.2 1
(AC007566) Homo sapiens BAC clone CTB-10G5 from 7q21-7q22, c... 46 1.2 1
(AC000064) Human BAC clone RG083M05 from 7q21-7q22, complete... 46 1.2 1
(AC159387) Bos taurus clone CH240-73I16, WORKING DRAFT SEQUE... 46 1.2 1
(AC156296) Bos taurus clone CH240-56A23, WORKING DRAFT SEQUE... 46 1.2 1
(AC156254) Xenopus tropicalis clone ISB1-39B6, WORKING DRAFT... 46 1.2 1
(AC148269) Callithrix jacchus clone CH259-528C14, WORKING DR... 46 1.2 1
(AC148267) Callithrix jacchus clone CH259-366L22, WORKING DR... 46 1.2 1
(AC142370) Rattus norvegicus clone CH230-506F12, WORKING DRA... 46 1.2 1
(AC128454) Rattus norvegicus clone CH230-203K18, *** SEQUENC... 46 1.2 1
(AC121692) Rattus norvegicus clone CH230-91K12, *** SEQUENCI... 46 1.2 1
(AC120809) Rattus norvegicus clone CH230-116B19, *** SEQUENC... 46 1.2 1
(AC118507) Rattus norvegicus clone CH230-222G6, WORKING DRAF... 46 1.2 1
(AC118106) Rattus norvegicus clone CH230-324B23, *** SEQUENC... 46 1.2 1
(AC115390) Rattus norvegicus clone CH230-195M21, WORKING DRA... 46 1.2 1
(AC114038) Rattus norvegicus clone CH230-63E24, *** SEQUENCI... 46 1.2 1
(AC113845) Rattus norvegicus clone CH230-134L23, WORKING DRA... 46 1.2 1
(AC112594) Rattus norvegicus clone CH230-34P13, *** SEQUENCI... 46 1.2 1
(AC109978) Rattus norvegicus clone CH230-225F15, *** SEQUENC... 46 1.2 1
(AC109750) Rattus norvegicus clone CH230-272C5, *** SEQUENCI... 46 1.2 1
(AC107000) Rattus norvegicus clone CH230-75M19, WORKING DRAF... 46 1.2 1
(AC106495) Rattus norvegicus clone CH230-184N9, *** SEQUENCI... 46 1.2 1
(AC098545) Rattus norvegicus clone CH230-103C1, WORKING DRAF... 46 1.2 1
(AC098522) Rattus norvegicus clone CH230-69L2, WORKING DRAFT... 46 1.2 1
(AC096173) Rattus norvegicus clone CH230-11I10, *** SEQUENCI... 46 1.2 1
(AC096044) Rattus norvegicus clone CH230-16A20, WORKING DRAF... 46 1.2 1
(AC094725) Rattus norvegicus clone CH230-5K4, *** SEQUENCING... 46 1.2 1
(FP089511) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(FP085412) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(FP074874) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(CU972437) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(CU928502) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(CU627996) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(AC091797) Felis catus clone RP86-5K24, WORKING DRAFT SEQUEN... 46 1.2 1
(AC091761) Felis catus clone RP86-42A8, WORKING DRAFT SEQUEN... 46 1.2 1
(AC084254) Homo sapiens clone RP11-207N5, LOW-PASS SEQUENCE ... 46 1.2 1
(AC073888) Homo sapiens chromosome 6 clone RP11-124N8, WORKI... 46 1.2 1
(AC073495) Mus musculus chromosome 11 clone RP23-345K4, WORK... 46 1.2 1
(CU467007) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(CU463859) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(CT025770) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(CR854944) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(BX640544) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(AC232271) Homo sapiens chromosome X clone RP11-922B14, WORK... 46 1.2 1
(AC231657) Homo sapiens chromosome X clone RP11-641J8, WORKI... 46 1.2 1
(AC223747) Bos taurus clone CH240-458H7, WORKING DRAFT SEQUE... 46 1.2 1
(AC220717) Bos taurus clone CH240-349A1, WORKING DRAFT SEQUE... 46 1.2 1
(AC194570) Macaca mulatta clone CH250-66M14, WORKING DRAFT S... 46 1.2 1
(DX098253) AU_BAC019B2F10_T7 CHORI212 Ictalurus punctatus ge... 46 1.2 1
(AJ861018) Brassica rapa subsp. pekinensis GSS, clone KBrH06... 46 1.2 1
(CZ496800) OA_BBa0143M01.f OA_BBa Oryza alta genomic clone O... 46 1.2 1
(CW921586) EDCAN41TF A. castellanii, 6-8 kb library from tot... 46 1.2 1
(CW920829) EDCAI88TR A. castellanii, 6-8 kb library from tot... 46 1.2 1
(CT131804) Sus scrofa genomic clone CH242-287N17, genomic su... 46 1.2 1
(AG696601) Macaca fuscata fuscata DNA, clone: MSB2-133I07_F,... 46 1.2 1
(AG565890) Mus musculus molossinus DNA, clone:MSMg01-486M05.... 46 1.2 1
(CE143543) tigr-gss-dog-17000371264781 Dog Library Canis lup... 46 1.2 1
(CE009830) tigr-gss-dog-17000320985244 Dog Library Canis lup... 46 1.2 1
(CC109933) NDL.29D17.T7 Notre Dame Liverpool Aedes aegypti g... 46 1.2 1
(BX242774) Danio rerio genomic clone DKEY-234O7, genomic sur... 46 1.2 1
(BX167192) Danio rerio genomic clone DKEY-167J6, genomic sur... 46 1.2 1
(DV776646) Hw_Fat_31_050804_B09 Bos taurus CF-24-HW fat cDNA... 46 1.2 1
(CX589477) TTE00032408 Amplicon Express - Conjugative Form T... 46 1.2 1
(CV944247) PU010D8 mycelium, subtracted infection mimic Phyt... 46 1.2 1
(CV229149) WS01912.B21_F24 PT-DX-N-A-10 Populus trichocarpa ... 46 1.2 1
(AJ824420) Prunus persica EST, clone S36A21. 46 1.2 1
(CF228119) PtaXM0008H6H0616 Poplar cDNA library from mature ... 46 1.2 1
(BM805482) AGENCOURT_6498316 NIH_MGC_124 Homo sapiens cDNA c... 46 1.2 1
(FF574949) TTEF632THB Tetrahymena thermophila conjugation cD... 46 1.2 1
(EV839373) TT1ES38TV Tetrahymena thermophila SB210 cDNA libr... 46 1.2 1
(AC117859) Rattus norvegicus clone CH230-345L6, *** SEQUENCI... 38 1.2 6
(AL731773) Mouse DNA sequence from clone RP23-152G20 on chro... 38 1.2 2
(AC165897) Bos taurus clone CH240-174L17, WORKING DRAFT SEQU... 38 1.2 6
(DB798915) Sus scrofa mRNA, clone:DCI010105G05, 5' end, expr... 38 1.2 2
(DJ051033) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 38 1.2 2
(DI107295) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 38 1.2 2
(CS083891) Sequence 74 from Patent WO2005040377. 38 1.2 2
(AC018735) Homo sapiens BAC clone RP11-372A6 from 2, complet... 36 1.2 4
(BX548028) Zebrafish DNA sequence from clone CH211-260H24 in... 34 1.2 6
(AC021592) Homo sapiens clone RP11-145G22, WORKING DRAFT SEQ... 32 1.2 5
(CU929306) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 1.2 2
(FP003596) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.2 4
(BX927375) Zebrafish DNA sequence from clone CH211-258B24 in... 38 1.3 3
(AE001390) Plasmodium falciparum 3D7 chromosome 2 section 27... 30 1.3 6

>(BJ413094) Dictyostelium discoideum cDNA clone:ddv14l06, 5' end,
single read.
Length = 475

Score = 722 bits (364), Expect(2) = 0.0
Identities = 364/364 (100%)
Strand = Plus / Plus


Query: 65 ttagcaattaattattgcgaattttctggaagtagtaaatatgtaagaaatattttaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ttagcaattaattattgcgaattttctggaagtagtaaatatgtaagaaatattttaaac 124


Query: 125 tcgaaagtagaaaaatttaaaagtgttaacccacaaatcgaatttgaatataaggtcaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tcgaaagtagaaaaatttaaaagtgttaacccacaaatcgaatttgaatataaggtcaat 184


Query: 185 cgtggatcacacccatacttaatagcaacatatgaatcaggagtaacaaaaactgtacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cgtggatcacacccatacttaatagcaacatatgaatcaggagtaacaaaaactgtacca 244


Query: 245 ttaagaggtagaacagaagaaaaagttttaaaacatattcaaaatcttaaagatacttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttaagaggtagaacagaagaaaaagttttaaaacatattcaaaatcttaaagatacttca 304


Query: 305 ggtgaaaaaccaagaaagtttggtgatagatatatttctaaaacagaatcaattcaagga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggtgaaaaaccaagaaagtttggtgatagatatatttctaaaacagaatcaattcaagga 364


Query: 365 ttgtggaatccattcattaattttagtaacagtgaacaataaatataaataaataaacaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttgtggaatccattcattaattttagtaacagtgaacaataaatataaataaataaacaa 424


Query: 425 acag 428
||||
Sbjct: 425 acag 428

Score = 113 bits (57), Expect(2) = 0.0
Identities = 57/57 (100%)
Strand = Plus / Plus


Query: 1 ataactattaaaatatatataaatacataaaatgtcaaagaatggtgtatggcaatt 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataactattaaaatatatataaatacataaaatgtcaaagaatggtgtatggcaatt 57

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 688,007,110
Number of extensions: 54719487
Number of successful extensions: 8194546
Number of sequences better than 10.0: 1703
Length of query: 476
Length of database: 98,766,808,389
Length adjustment: 23
Effective length of query: 453
Effective length of database: 96,507,600,660
Effective search space: 43717943098980
Effective search space used: 43717943098980
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15457-1 (Contig-U15457-1Q) /CSM_Contig/Contig-U15457-1Q.Seq.d
(476 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

EF145491_1(EF145491|pid:none) Populus trichocarpa clone WS01125_... 95 7e-19
AK227646_1(AK227646|pid:none) Arabidopsis thaliana mRNA for hypo... 93 3e-18
AC151460_2(AC151460|pid:none) Medicago truncatula clone mth2-6f1... 91 1e-17
AM484004_1(AM484004|pid:none) Vitis vinifera contig VV78X217648.... 88 8e-17
EU960743_1(EU960743|pid:none) Zea mays clone 228174 mitochondria... 86 3e-16
AC105928_7(AC105928|pid:none) Oryza sativa (japonica cultivar-gr... 86 4e-16
EU968107_1(EU968107|pid:none) Zea mays clone 314426 mitochondria... 83 4e-15
BT071538_1(BT071538|pid:none) Picea sitchensis clone WS02921_H03... 81 1e-14
CR548612_53(CR548612|pid:none) Paramecium tetraurelia macronucle... 73 3e-12
AP007166_421(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 69 5e-11
(Q5A3J1) RecName: Full=54S ribosomal protein L51, mitochondrial; 67 2e-10
CR380953_71(CR380953|pid:none) Candida glabrata strain CBS138 ch... 67 2e-10
(Q9UUC8) RecName: Full=60S ribosomal protein L51, mitochondrial;... 65 6e-10
(Q758S3) RecName: Full=54S ribosomal protein L51, mitochondrial;... 65 8e-10
FN392319_943(FN392319|pid:none) Pichia pastoris GS115 chromosome... 65 1e-09
CP000581_561(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 63 3e-09
CU928170_458(CU928170|pid:none) Kluyveromyces thermotolerans str... 63 4e-09
(Q06090) RecName: Full=54S ribosomal protein L51, mitochondrial;... 62 6e-09
CR940348_667(CR940348|pid:none) Theileria annulata strain Ankara... 59 4e-08
T19441(T19441) hypothetical protein C25A1.13 - Caenorhabditis el... 59 4e-08
CR382126_362(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 58 1e-07
CR382135_133(CR382135|pid:none) Debaryomyces hansenii strain CBS... 55 8e-07
AM910990_96(AM910990|pid:none) Plasmodium knowlesi strain H chro... 55 1e-06
FN319748_1(FN319748|pid:none) Schistosoma japonicum isolate Anhu... 54 1e-06
AY223251_1(AY223251|pid:none) Schistosoma japonicum SJCHGC04526 ... 54 1e-06
BC158935_1(BC158935|pid:none) Xenopus tropicalis mitochondrial r... 54 2e-06
BT081514_1(BT081514|pid:none) Rana catesbeiana clone rcat-evr-52... 52 5e-06
EU967219_1(EU967219|pid:none) Zea mays clone 300454 unknown mRNA. 51 1e-05
BC065812_1(BC065812|pid:none) Mus musculus mitochondrial ribosom... 50 2e-05
BC027676_1(BC027676|pid:none) Mus musculus, mitochondrial riboso... 50 2e-05
AB016886_23(AB016886|pid:none) Arabidopsis thaliana genomic DNA,... 50 2e-05
(Q95KE5) RecName: Full=39S ribosomal protein L43, mitochondrial;... 49 4e-05
AB062594_1(AB062594|pid:none) Bos taurus mRNA, complete cds, sim... 48 1e-04
AL133215_6(AL133215|pid:none) Human DNA sequence from clone RP11... 47 2e-04
AK300237_1(AK300237|pid:none) Homo sapiens cDNA FLJ61386 complet... 47 2e-04
AL133215_12(AL133215|pid:none) Human DNA sequence from clone RP1... 47 2e-04
AL133215_9(AL133215|pid:none) Human DNA sequence from clone RP11... 47 2e-04
BT079508_1(BT079508|pid:none) Esox lucius clone eluc-evq-532-304... 47 2e-04
(Q8N983) RecName: Full=39S ribosomal protein L43, mitochondrial;... 47 2e-04
AL133215_10(AL133215|pid:none) Human DNA sequence from clone RP1... 47 2e-04
AC087327_24(AC087327|pid:none) Trypanosoma brucei chromosome 4 c... 47 2e-04
BT074576_1(BT074576|pid:none) Osmerus mordax clone omor-eva-510-... 46 5e-04
EU971334_1(EU971334|pid:none) Zea mays clone 362326 unknown mRNA. 45 6e-04
EU965985_1(EU965985|pid:none) Zea mays clone 290586 NADH-ubiquin... 45 8e-04
AK291069_1(AK291069|pid:none) Homo sapiens cDNA FLJ76392 complet... 44 0.001
BC076139_1(BC076139|pid:none) Danio rerio zgc:92655, mRNA (cDNA ... 44 0.002
BT073463_1(BT073463|pid:none) Oncorhynchus mykiss clone omyk-evn... 44 0.002
EU963095_1(EU963095|pid:none) Zea mays clone 257497 NADH-ubiquin... 44 0.002
AE017348_288(AE017348|pid:none) Cryptococcus neoformans var. neo... 42 0.005
AC116963_90(AC116963|pid:none) Dictyostelium discoideum chromoso... 42 0.007
DQ066277_1(DQ066277|pid:none) Ixodes scapularis isolate is-all-6... 42 0.007
AM502249_194(AM502249|pid:none) Leishmania infantum chromosome 31. 41 0.012
AB168234_1(AB168234|pid:none) Macaca fascicularis testis cDNA cl... 40 0.020
AK342087_1(AK342087|pid:none) Acyrthosiphon pisum ACYPI004785 mR... 40 0.034
BC031287_1(BC031287|pid:none) Homo sapiens mitochondrial ribosom... 39 0.045
DQ214584_1(DQ214584|pid:none) Taeniopygia guttata clone 0063P001... 39 0.045
DQ885741_1(DQ885741|pid:none) Pongo pygmaeus mitochondrial compl... 39 0.045
AM494968_176(AM494968|pid:none) Leishmania braziliensis chromoso... 39 0.076
AJ721049_1(AJ721049|pid:none) Gallus gallus mRNA for hypothetica... 37 0.17
AF124786_1(AF124786|pid:none) Mus musculus NADH-ubiquinone oxido... 37 0.22
(Q9CQ75) RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha s... 37 0.22
AM270279_15(AM270279|pid:none) Aspergillus niger contig An12c023... 36 0.49
EF613026_1(EF613026|pid:none) Uncultured bacterium clone YSK-G3 ... 33 2.5
M33228_1(M33228|pid:none) T.brucei kinetoplast ATPase 6 edited m... 33 3.2
AP009608_346(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 33 3.2
AM460524_2(AM460524|pid:none) Vitis vinifera contig VV78X219651.... 33 4.2
CP001616_2236(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 32 5.5
(Q859W7) RecName: Full=Protein ycf2; &AB086179_21(AB086179|pid:... 32 7.1
CP001325_135(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 32 7.1
AL929356_23(AL929356|pid:none) Plasmodium falciparum strain 3D7,... 32 7.1
AP009178_466(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 32 7.1
CR382138_820(CR382138|pid:none) Debaryomyces hansenii strain CBS... 32 7.1
CP000393_3351(CP000393|pid:none) Trichodesmium erythraeum IMS101... 32 9.3
AE017226_1045(AE017226|pid:none) Treponema denticola ATCC 35405,... 32 9.3

>EF145491_1(EF145491|pid:none) Populus trichocarpa clone WS01125_E09
unknown mRNA.
Length = 119

Score = 95.1 bits (235), Expect = 7e-19
Identities = 43/119 (36%), Positives = 71/119 (59%)
Frame = +2

Query: 32 MSKNGVWQLKKLAINYCEFSGSSKYVRNILNSKVEKFKSVNPQIEFEYKVNRGSHPYLIA 211
M+ G+WQLKKL ++YC++ GSS+ +R + S + +K NPQ+E +++RG HP L A
Sbjct: 1 MAWKGIWQLKKLVVSYCDWGGSSRGIRAFIESNLPAYKDSNPQLEVITELSRGQHPCLKA 60

Query: 212 TYESGVTKTVPLRGRTEEKVLKHIQNLKDTSGEKPRKFGDRYISKTESIQGLWNPFINF 388
Y++ + V ++ E VL H L++ G K +K R+++K S+QG W + F
Sbjct: 61 FYKNKNERVVCVKNLVSEDVLLHATKLRNALGRKVKKLPTRHVTKHPSVQGTWTTDVRF 119

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 660,533,055
Number of extensions: 12119073
Number of successful extensions: 28801
Number of sequences better than 10.0: 74
Number of HSP's gapped: 28783
Number of HSP's successfully gapped: 74
Length of query: 158
Length of database: 1,051,180,864
Length adjustment: 118
Effective length of query: 40
Effective length of database: 669,266,902
Effective search space: 26770676080
Effective search space used: 26770676080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)

PSORT

psg: 0.57 gvh: 0.26 alm: 0.55 top: 0.53 tms: 0.00 mit: 0.32 mip: 0.06
nuc: 0.03 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
28.0 %: mitochondrial
12.0 %: cytoplasmic
8.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for Contig-U15457-1 is nuc

VS (DIR, S) 3
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0