Contig-U15440-1
Contig ID Contig-U15440-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15440-1 (Contig-U15440-1Q) /CSM_Contig/Contig-U15440-1Q.Seq.d
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAACAACAATAAAAATGGA
AGAAGTATTAAAATATTTTAGACGTATTTCATCAATTATTATACTTTTAG
TTTCATCAGTGTATGCAGCAACATTTTTAATGTTTCCTGTGATTGCATTG
ATTGAACCATTTTATAAAAAGTTAGCATTCAAATTACAAGCTAAAATCGC
ATCGGGATGGTTTAGATTGGTTTTATTTGTTTTCGAAGTTCTCAATGGTA
TAGAAATTAGATATTATGGTGAAGATGATATTCAAGAAGGTGAATCAATC
ATTATGATGATGAATCATCCATCAGAAATTGATTGGTTATTCTCTTTTAG
TATTGCACAAAGAAAGAAAGCTTTATCAAATATTAAGGTTTTATTGAAAA
ATGAAGTAAGATTTGTACCAGGTGTTGGTTGGGGATGTGATAATTTAGAT
TACATCTTTTTAACAAGAGATTGGACATTCGATGAAAATCATATTGAATA
TAAAATTAATAAATATAAAGAAAGTGAATGTAAACCATGGTTAGTTATTT
TCCCAGAGGGTACCGATATTGATGATGTTAAATTAAAAAAAAGTTGGGAT
TTTGCAGAAAAGAATGGATTCCCAAAATTTAATAATGTACTTTTACCAAG
ACATAAAGGTTTACATGCATGTGTTGAACCATTAAGAGATACAATTGATT
GTGTATATGATTTAACAATCGGTTATGAAGGTAAACCAACCATTTTATCA
TGTATTAGTGGAACAAGTCCAAGAGTTGTAAATATTCATATTAAGAGATA
TTCACTTGATGAAATTCCAAAGGATGAAAACCAACTTCAAAAATGGTTAT
TTAATCGTTATCATGAAAAAGATCAAATGTTACAATACTTAAAAGAAAAT
AAAACTTATTCAATGCCATATAGAATTCATAAACCTTCATTATCAATTTA
TGCATCAGCATTTTTATGGTTTTATTACTTTATGTTACCAATCACCAATT
TACTTTTAATTTCTTCATTTACAAGAGTGTACTTTATCATAGCATTTGTT
TATCACATTTTAAATTCAAAATATGAACCACTTCGTAAATTAAGAGGATT
ACAAAATGCAATTTATTCAAAAAAAGAAAAATCTCATTAAATAAATAAAT
ATTGATTTGGAAATTAGGATTTTGTTTAGATAAAAAAAAAAAAAATAAAA
ATAAAAATCAAACCTTATCACTACCGATAATTAAATTAAAAAAAAAAA

Gap no gap
Contig length 1248
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3707086
End point 3708326
Strand (PLUS/MINUS) PLUS
Number of clones 9
Number of EST 8
Link to clone list U15440
List of clone(s)

est1=SSD862F,1,244
est2=SLB151E,35,1240
est3=VFE395Z,443,1000
est4=VFM709Z,465,1039
est5=VFH691Z,473,1055
est6=FCL-AD10Z,609,1248
est7=SFJ528Z,738,985
est8=SSD878Z,859,1241
Translated Amino Acid sequence
IKKKKKKKKKSTTIKMEEVLKYFRRISSIIILLVSSVYAATFLMFPVIALIEPFYKKLAF
KLQAKIASGWFRLVLFVFEVLNGIEIRYYGEDDIQEGESIIMMMNHPSEIDWLFSFSIAQ
RKKALSNIKVLLKNEVRFVPGVGWGCDNLDYIFLTRDWTFDENHIEYKINKYKESECKPW
LVIFPEGTDIDDVKLKKSWDFAEKNGFPKFNNVLLPRHKGLHACVEPLRDTIDCVYDLTI
GYEGKPTILSCISGTSPRVVNIHIKRYSLDEIPKDENQLQKWLFNRYHEKDQMLQYLKEN
KTYSMPYRIHKPSLSIYASAFLWFYYFMLPITNLLLISSFTRVYFIIAFVYHILNSKYEP
LRKLRGLQNAIYSKKEKSH*inky*fgn*dfv*ikkkkikikikpyhyr*ln*kkk


Translated Amino Acid sequence (All Frames)
Frame A:
IKKKKKKKKKSTTIKMEEVLKYFRRISSIIILLVSSVYAATFLMFPVIALIEPFYKKLAF
KLQAKIASGWFRLVLFVFEVLNGIEIRYYGEDDIQEGESIIMMMNHPSEIDWLFSFSIAQ
RKKALSNIKVLLKNEVRFVPGVGWGCDNLDYIFLTRDWTFDENHIEYKINKYKESECKPW
LVIFPEGTDIDDVKLKKSWDFAEKNGFPKFNNVLLPRHKGLHACVEPLRDTIDCVYDLTI
GYEGKPTILSCISGTSPRVVNIHIKRYSLDEIPKDENQLQKWLFNRYHEKDQMLQYLKEN
KTYSMPYRIHKPSLSIYASAFLWFYYFMLPITNLLLISSFTRVYFIIAFVYHILNSKYEP
LRKLRGLQNAIYSKKEKSH*inky*fgn*dfv*ikkkkikikikpyhyr*ln*kkk


Frame B:
*kkkkkkkknqqq*kwkky*nildvfhqllyf*fhqcmqqhf*cfl*lh*lnhfiks*hs
nyklkshrdgldwfylfskfsmv*kldimvkmifkkvnqsl***iihqkligysllvlhk
erklyqilrfy*kmk*dlyqvlvgdvii*itsf*qeighsmkiilniklinikkvnvnhg
*lfsqrvpilmmln*kkvgilqkrmdsqnlimyfyqdikvymhvlnh*eiqlivymi*qs
vmkvnqpfyhvlveqvqel*ifilrdihlmkfqrmktnfkngylivimkkikcynt*kki
kliqchiefinlhyqfmhqhfygfitlcyqspiyf*flhlqectls*hlfitf*iqnmnh
fvn*edykmqfiqkkknlik*inidleirilfr*kkkk*k*ksnlittdn*ikkk


Frame C:
kkkkkkkkkinnnkngrsikif*tyfinyytfsfisvcsnifnvscdcid*til*kvsiq
its*nrigmv*igficfrssqwyrn*ilw*r*ysrr*inhyddessirn*lvilf*yctk
kesfiky*gfiek*skictrcwlgm**frlhlfnkrldir*ksy*i*n**i*rk*m*tmv
syfprgyry**c*ikkklgfcrkewipki**ctftkt*rftcmc*tikryn*lci*fnnr
l*r*tnhfimy*wnksksckysy*eift**nskg*kptskmvi*sls*krsnvtilkrk*
nlfnai*ns*tfiinlcisifmvlllyvtnhqftfnffiyksvlyhsiclshfkfki*tt
s*ikritkcnlfkkrkislnk*iliwklgfcldkkkknknknqtlslpiiklkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15440-1 (Contig-U15440-1Q)
/CSM_Contig/Contig-U15440-1Q.Seq.d
(1248 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15440-1 (Contig-U15440-1Q) /CSM_Contig/Conti... 2109 0.0
Contig-U16157-1 (Contig-U16157-1Q) /CSM_Contig/Conti... 38 0.032
Contig-U15008-1 (Contig-U15008-1Q) /CSM_Contig/Conti... 38 0.032
Contig-U12065-1 (Contig-U12065-1Q) /CSM_Contig/Conti... 38 0.032
Contig-U11176-1 (Contig-U11176-1Q) /CSM_Contig/Conti... 38 0.032
Contig-U10449-1 (Contig-U10449-1Q) /CSM_Contig/Conti... 38 0.032
Contig-U09357-1 (Contig-U09357-1Q) /CSM_Contig/Conti... 38 0.032
Contig-U09041-1 (Contig-U09041-1Q) /CSM_Contig/Conti... 38 0.032
Contig-U16320-1 (Contig-U16320-1Q) /CSM_Contig/Conti... 36 0.13
Contig-U13029-1 (Contig-U13029-1Q) /CSM_Contig/Conti... 32 2.0

>Contig-U15440-1 (Contig-U15440-1Q) /CSM_Contig/Contig-U15440-1Q.Seq.d
Length = 1248

Score = 2109 bits (1064), Expect = 0.0
Identities = 1080/1088 (99%)
Strand = Plus / Plus


Query: 31 tcaacaacaataaaaatggaagaagtattaaaatattttagacgtatttcatcaattatt 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 tcaacaacaataaaaatggaagaagtattaaaatattttagacgtatttcatcaattatt 90


Query: 91 atacttttagtttcatcagtgtatgcagcaacatttttaatgtttcctgtgattgcattg 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atacttttagtttcatcagtgtatgcagcaacatttttaatgtttcctgtgattgcattg 150


Query: 151 attgaaccattttataaaaagttagcattcaaattacaagctaaaatcgcatcgggatgg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 attgaaccattttataaaaagttagcattcaaattacaagctaaaatcgcatcgggatgg 210


Query: 211 tttagattggttttatttgttttcgaagttctcaatggtatagaaattagatattatggt 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tttagattggttttatttgttttcgaagttctcaatggtatagaaattagatattatggt 270


Query: 271 gaagatgatattcaagaaggtgaatcaatcattatgatgatgaatcatccatcagaaatt 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gaagatgatattcaagaaggtgaatcaatcattatgatgatgaatcatccatcagaaatt 330


Query: 331 gattggttattctcttttagtattgcacaaagaaagaaagctttatcaaatattaaggtt 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gattggttattctcttttagtattgcacaaagaaagaaagctttatcaaatattaaggtt 390


Query: 391 ttattgaaaaatgaagtaagatttgtaccaggtgttggttggggatgtgataatttagat 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttattgaaaaatgaagtaagatttgtaccaggtgttggttggggatgtgataatttagat 450


Query: 451 tacatctttttaacaagagattggacattcgatgaaaatcatattgaatataaaattaat 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tacatctttttaacaagagattggacattcgatgaaaatcatattgaatataaaattaat 510


Query: 511 aaatataaagaaagtgaatgtaaaccatggttagttattttcccagagggtaccgatatt 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaatataaagaaagtgaatgtaaaccatggttagttattttcccagagggtaccgatatt 570


Query: 571 gatgatgttaaattnnnnnnnngttgggattttgcagaaaagaatggattcccaaaattt 630
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gatgatgttaaattaaaaaaaagttgggattttgcagaaaagaatggattcccaaaattt 630


Query: 631 aataatgtacttttaccaagacataaaggtttacatgcatgtgttgaaccattaagagat 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aataatgtacttttaccaagacataaaggtttacatgcatgtgttgaaccattaagagat 690


Query: 691 acaattgattgtgtatatgatttaacaatcggttatgaaggtaaaccaaccattttatca 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 acaattgattgtgtatatgatttaacaatcggttatgaaggtaaaccaaccattttatca 750


Query: 751 tgtattagtggaacaagtccaagagttgtaaatattcatattaagagatattcacttgat 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tgtattagtggaacaagtccaagagttgtaaatattcatattaagagatattcacttgat 810


Query: 811 gaaattccaaaggatgaaaaccaacttcaaaaatggttatttaatcgttatcatgaaaaa 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 gaaattccaaaggatgaaaaccaacttcaaaaatggttatttaatcgttatcatgaaaaa 870


Query: 871 gatcaaatgttacaatacttaaaagaaaataaaacttattcaatgccatatagaattcat 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gatcaaatgttacaatacttaaaagaaaataaaacttattcaatgccatatagaattcat 930


Query: 931 aaaccttcattatcaatttatgcatcagcatttttatggttttattactttatgttacca 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 aaaccttcattatcaatttatgcatcagcatttttatggttttattactttatgttacca 990


Query: 991 atcaccaatttacttttaatttcttcatttacaagagtgtactttatcatagcatttgtt 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 atcaccaatttacttttaatttcttcatttacaagagtgtactttatcatagcatttgtt 1050


Query: 1051 tatcacattttaaattcaaaatatgaaccacttcgtaaattaagaggattacaaaatgca 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 tatcacattttaaattcaaaatatgaaccacttcgtaaattaagaggattacaaaatgca 1110


Query: 1111 atttattc 1118
||||||||
Sbjct: 1111 atttattc 1118


Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Plus


Query: 1132 tctcattaaataaataaatattgatttggaaattaggattttgtttagat 1181
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 tctcattaaataaataaatattgatttggaaattaggattttgtttagat 1181


Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 1208 tcaaaccttatcactaccgataattaaatt 1237
||||||||||||||||||||||||||||||
Sbjct: 1208 tcaaaccttatcactaccgataattaaatt 1237


>Contig-U16157-1 (Contig-U16157-1Q) /CSM_Contig/Contig-U16157-1Q.Seq.d
Length = 1674

Score = 38.2 bits (19), Expect = 0.032
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 827 aaaaccaacttcaaaaatg 845
|||||||||||||||||||
Sbjct: 1522 aaaaccaacttcaaaaatg 1540


>Contig-U15008-1 (Contig-U15008-1Q) /CSM_Contig/Contig-U15008-1Q.Seq.d
Length = 2201

Score = 38.2 bits (19), Expect = 0.032
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 497 aatataaaattaataaata 515
|||||||||||||||||||
Sbjct: 2136 aatataaaattaataaata 2154


Score = 30.2 bits (15), Expect = 7.8
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1136 attaaataaataaat 1150
|||||||||||||||
Sbjct: 2119 attaaataaataaat 2133


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 35,710
Number of Sequences: 8402
Number of extensions: 35710
Number of successful extensions: 6254
Number of sequences better than 10.0: 584
length of query: 1248
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1232
effective length of database: 7,941,110
effective search space: 9783447520
effective search space used: 9783447520
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.26
Homology vs DNA
Query= Contig-U15440-1 (Contig-U15440-1Q) /CSM_Contig/Contig-U15440-1Q.Seq.d
(1248 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU033544) Dictyostelium discoideum slug cDNA, clone SLB151. 1021 0.0 2
(AU060695) Dictyostelium discoideum slug cDNA, clone SLB151. 954 0.0 4
(BJ434417) Dictyostelium discoideum cDNA clone:ddv16e24, 3' ... 918 0.0 2
(BJ435078) Dictyostelium discoideum cDNA clone:ddv26b03, 3' ... 886 0.0 2
(BJ431120) Dictyostelium discoideum cDNA clone:ddv9n23, 3' e... 809 0.0 2
(C92337) Dictyostelium discoideum slug cDNA, clone SSD878. 513 e-164 2
(AU072263) Dictyostelium discoideum slug cDNA, clone SSD862. 416 e-112 1
(BJ402058) Dictyostelium discoideum cDNA clone:dds20g07, 3' ... 264 7e-66 1
(CJ454901) Macaca fascicularis mRNA, clone: QflA-20661, 5' e... 44 0.001 3
(AL844506) Plasmodium falciparum chromosome 7. 34 0.002 13
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 32 0.006 24
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 36 0.009 14
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 0.021 13
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 0.022 19
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 42 0.028 18
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 40 0.035 12
(CP000312) Clostridium perfringens SM101, complete genome. 38 0.036 18
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 38 0.036 19
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 36 0.045 13
(AC192127) Pan troglodytes BAC clone CH251-643H13 from chrom... 52 0.051 1
(AC187737) Pan troglodytes BAC clone CH251-508L18 from chrom... 52 0.051 1
(AC232399) Brassica rapa subsp. pekinensis clone KBrH028K09,... 52 0.051 1
(AC098654) Homo sapiens chromosome 1 clone RP11-475O6, compl... 52 0.051 1
(AC022459) Homo sapiens BAC clone RP11-28I21 from 1, complet... 52 0.051 1
(AC232116) Solanum tuberosum strain Diploid genotype RH89-03... 52 0.051 1
(AC166639) Solanum demissum chromosome 11 clone PGEC10I24, *... 52 0.051 1
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 42 0.055 18
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 42 0.058 17
(EU938374) Troglophilus neglectus mitochondrion, complete ge... 32 0.058 6
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 36 0.077 14
(AM442698) Vitis vinifera contig VV78X209056.6, whole genome... 48 0.088 3
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 30 0.097 12
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 0.12 12
(AC093876) Homo sapiens BAC clone RP11-631I21 from 4, comple... 42 0.14 8
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 42 0.15 18
(CU929740) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.15 5
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 0.17 12
(AC160591) Sorex araneus clone SA_Ba-191B3, WORKING DRAFT SE... 40 0.18 5
(AC108136) Homo sapiens chromosome 8, clone RP11-96B2, compl... 36 0.19 7
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 34 0.20 21
(CP000727) Clostridium botulinum A str. Hall, complete genome. 42 0.20 17
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 0.21 18
(AY686475) Mus musculus strain 129S6/SvEvTac chromosome 6 cl... 34 0.21 10
(AY842725) Chrysomya nigripes voucher ABTC78496 NADH dehydro... 36 0.25 4
(AL034559) Plasmodium falciparum MAL3P7. 32 0.25 11
(AE000783) Borrelia burgdorferi B31, complete genome. 32 0.25 18
(AC108733) Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cance... 38 0.26 6
(AM477374) Vitis vinifera contig VV78X250688.11, whole genom... 40 0.28 5
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.28 14
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 34 0.30 22
(AC107468) Rattus norvegicus clone CH230-138D19, *** SEQUENC... 38 0.31 6
(CU695041) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 0.33 9
(AC171500) Mus musculus BAC clone RP24-67A10 from chromosome... 36 0.36 6
(AC124314) Mus musculus chromosome 10, clone RP23-193B6, com... 40 0.38 11
(CR376754) Zebrafish DNA sequence from clone CH211-254O14 in... 36 0.38 4
(AF029366) Entamoeba histolytica chaperonin 60 (cpn60) gene,... 34 0.40 3
(BX950229) Methanococcus maripaludis strain S2, complete seq... 32 0.42 23
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49... 36 0.43 11
(CP000743) Methanococcus aeolicus Nankai-3, complete genome. 34 0.44 20
(AC208256) Chlorocebus aethiops clone CH252-517H5, WORKING D... 38 0.44 2
(AC108941) Homo sapiens BAC clone RP11-736K12 from 4, comple... 34 0.45 11
(AC151040) Callithrix jacchus clone CH259-508H16, WORKING DR... 34 0.46 6
(AC184074) Populus trichocarpa clone Pop1-51H15, complete se... 34 0.46 2
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 36 0.49 14
(DQ394808) Lactococcus phage ul36.t1, complete genome. 44 0.50 4
(AC130833) Mus musculus BAC clone RP24-91H16 from chromosome... 40 0.56 6
(AY449462) Oikopleura dioica clone BACOIKO006 3xn11, complet... 44 0.61 4
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.63 12
(CU928292) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.63 9
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 42 0.65 21
(BU408583) 602955170F1 CSEQRBL03 Gallus gallus cDNA clone Ch... 42 0.67 3
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 36 0.68 11
(AE015450) Mycoplasma gallisepticum strain R complete genome. 36 0.68 18
(AM285309) Spiroplasma citri GII3-3X chromosome, contig Cont... 42 0.70 5
(AL121576) Human chromosome 14 DNA sequence BAC R-476J6 of l... 38 0.71 6
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 0.74 11
(DE120338) Oryzias latipes DNA, reverse end of BAC clone: Md... 40 0.76 2
(AC134981) Homo sapiens chromosome 15, clone RP11-361C13, co... 38 0.76 9
(AC213077) Pan troglodytes BAC clone CH251-76L4 from chromos... 32 0.78 10
(AC158342) Mus musculus chromosome 1, clone RP23-12H12, comp... 48 0.80 1
(AC134788) Mus musculus chromosome 1, clone RP24-482A14, com... 48 0.80 1
(AM440596) Vitis vinifera contig VV78X027473.20, whole genom... 48 0.80 1
(AB210286) Sus scrofa TLR6, TLR1, TLR10 genes for Toll-like ... 48 0.80 1
(AL513209) Human DNA sequence from clone RP11-177F15 on chro... 48 0.80 1
(AC090505) Homo sapiens 3 BAC RP11-152D21 (Roswell Park Canc... 48 0.80 1
(AC104636) Homo sapiens chromosome 3 clone RP11-726K18, WORK... 48 0.80 1
(AC102522) Mus musculus chromosome 1 clone RP24-141M1 map 1,... 48 0.80 1
(CU694791) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.80 1
(AC060774) Homo sapiens clone RP11-587E20, LOW-PASS SEQUENCE... 48 0.80 1
(EJ443767) 1093015314886 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.80 1
(DC226702) Plasmodium berghei strain ANKA cDNA clone:SG00671... 48 0.80 1
(DC226613) Plasmodium berghei strain ANKA cDNA clone:SG00644... 48 0.80 1
(BB973245) Plasmodium berghei str. ANKA cDNA clone: OK003020... 48 0.80 1
(AE017143) Haemophilus ducreyi strain 35000HP complete genome. 48 0.80 1
(CP000233) Lactobacillus salivarius UCC118, complete genome. 34 0.85 24
(EU677193) Oedogonium cardiacum strain SAG 575-1b chloroplas... 34 0.86 11
(ED825374) MUGQ_CH252P155J09T7_CN180_039 CHORI-252 Vervet Mo... 46 0.86 2
(AL671991) Mouse DNA sequence from clone RP23-343L7 on chrom... 44 0.87 8
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 0.90 10
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.92 13
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont... 40 0.93 7
(EJ235832) 1092405945133 Global-Ocean-Sampling_GS-27-01-01-1... 38 0.97 2
(AL929330) Zebrafish DNA sequence from clone CH211-26A17. 38 0.98 5
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 30 0.99 10
(AC141474) Mus musculus BAC clone RP24-192L11 from chromosom... 40 1.0 5
(AC026228) Homo sapiens chromosome 10 clone RP11-95G14, comp... 38 1.0 5
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 1.1 14
(AC024603) Homo sapiens chromosome 10 clone RP11-325D15, com... 40 1.1 5
(AC107498) Rattus norvegicus clone CH230-104K23, *** SEQUENC... 36 1.2 6
(AC188200) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 32 1.2 9
(AL844509) Plasmodium falciparum chromosome 13. 36 1.3 11
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 34 1.4 9
(AM285311) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 1.4 9
(CE667735) tigr-gss-dog-17000329257278 Dog Library Canis lup... 38 1.5 3
(EF568108) Glossina pallidipes salivary gland hypertrophy vi... 34 1.5 12
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 40 1.5 11
(AC136196) Papio anubis clone RP41-180M2, WORKING DRAFT SEQU... 40 1.6 7
(AC024895) Homo sapiens chromosome 3 clone RP11-368C9, WORKI... 34 1.6 8
(AC139190) Pan troglodytes BAC clone RP43-12I19 from chromos... 32 1.7 8
(EE090705) S7B06403 Berries 14mm with GA3 (VvS7) Vitis vinif... 34 1.7 3
(AC179104) Strongylocentrotus purpuratus clone R3-4011E17, W... 34 1.7 7
(BX242271) Danio rerio genomic clone DKEY-245H3, genomic sur... 30 1.7 4
(AC131942) Mus musculus BAC clone RP24-478A20 from 3, comple... 40 1.7 6
(AM466269) Vitis vinifera, whole genome shotgun sequence, co... 32 1.8 2
(AX458489) Sequence 35 from Patent WO0246454. 36 1.8 7
(AC097500) Homo sapiens BAC clone RP11-335G13 from 2, comple... 30 1.9 13
(DR418434) gPGC_EST08276 Embryonic gonadal PGC cDNA Library ... 46 1.9 2
(CU469560) Medicago truncatula chromosome 5 clone mth4-3g17,... 36 2.0 10
(EK022835) 1092955342457 Global-Ocean-Sampling_GS-31-01-01-1... 30 2.1 4
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 32 2.1 21
(CT491606) A BAC library has been constructed from cultivar ... 34 2.1 2
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 32 2.1 13
(DX067308) KBrB075K17R KBrB, Brassica rapa BamHI BAC library... 32 2.2 2
(AU270911) Dictyostelium discoideum vegetative cDNA clone:VS... 34 2.2 2
(DX037377) KBrB036C21F KBrB, Brassica rapa BamHI BAC library... 32 2.2 2
(AL132666) Human chromosome 14 DNA sequence BAC R-16N22 of l... 32 2.3 7
(CU929867) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.3 5
(AE017263) Mesoplasma florum L1 complete genome. 36 2.3 19
(CU927964) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 2.3 8
(AC189357) Brassica rapa subsp. pekinensis clone KBrB044D19,... 42 2.3 6
(AC138084) Mus musculus BAC clone RP23-353F23 from chromosom... 38 2.4 7
(CS374521) Sequence 624 from Patent WO2006034879. 34 2.4 4
(CS374249) Sequence 352 from Patent WO2006034879. 34 2.4 4
(AE001410) Plasmodium falciparum 3D7 chromosome 2 section 47... 34 2.4 4
(DQ394810) Lactococcus phage phismq86, complete genome. 44 2.4 3
(BD428978) Method and nucleic acids for pharmacogenomic meth... 38 2.4 3
(AX348457) Sequence 152 from Patent WO0202806. 38 2.4 3
(AX347041) Sequence 2112 from Patent WO0200928. 38 2.4 3
(AX344574) Sequence 25 from Patent WO0200932. 36 2.4 11
(AC146571) Medicago truncatula clone mth2-104a2, complete se... 34 2.5 8
(AC060232) Homo sapiens chromosome 10 clone RP11-458D17, com... 38 2.5 10
(AL157906) Human DNA sequence from clone RP5-896C23 on chrom... 36 2.5 5
(DR557916) WS02612.B21_J14 WS-PP-N-A-12 Picea glauca cDNA cl... 44 2.5 2
(CU179635) M.truncatula DNA sequence from clone MTH2-20H1 on... 40 2.5 6
(DQ394809) Lactococcus phage ul36.t1k1, complete genome. 44 2.6 3
(AJ493124) Varroa destructor complete mitochondrial genome. 32 2.6 4
(EJ512455) 1095407109274 Global-Ocean-Sampling_GS-28-01-01-1... 38 2.6 2
(AM432926) Vitis vinifera contig VV78X100432.9, whole genome... 42 2.7 2
(AL161730) Human DNA sequence from clone RP11-441I5 on chrom... 38 2.7 10
(AC006529) Homo sapiens clone SCb-20L24 from 7q31, complete ... 40 2.8 6
(EJ285568) 1095368019339 Global-Ocean-Sampling_GS-27-01-01-1... 38 2.9 2
(ET680931) CHO_OF344xh12f1.ab1 CHO_OF Nicotiana tabacum geno... 42 2.9 2
(AM464192) Vitis vinifera contig VV78X272352.9, whole genome... 34 3.0 4
(DY733341) EST_ssal_rgb2_89080 ssalrgb2 mixed_tissue Salmo s... 40 3.1 2
(AX344564) Sequence 15 from Patent WO0200932. 34 3.1 14
(AX344565) Sequence 16 from Patent WO0200932. 32 3.1 14
(AC018704) Homo sapiens chromosome 8 clone RP11-87N16, WORKI... 36 3.1 6
(Z67753) Odontella sinensis complete chloroplast genome. 36 3.2 8
(AC119968) Mus musculus chromosome 8, clone RP24-473C10, com... 46 3.2 1
(AM433361) Vitis vinifera contig VV78X163354.4, whole genome... 46 3.2 1
(AR394964) Sequence 979 from patent US 6617156. 46 3.2 1
(AC171386) Sorex araneus clone SA_Ba-429O4, complete sequence. 46 3.2 1
(EF050389) Anelosimus dubiosus voucher 017A NADH dehydrogena... 46 3.2 1
(EF050388) Anelosimus dubiosus voucher 078A NADH dehydrogena... 46 3.2 1
(DQ884662) Chilicola rostrata voucher EA0137 elongation fact... 46 3.2 1
(AC225120) Solanum lycopersicum chromosome 05 clone C05SLe00... 46 3.2 1
(AC211081) Solanum lycopersicum chromosome 6 clone C06SLe000... 46 3.2 1
(AC175803) Sorex araneus clone SA_Ba-273G1, WORKING DRAFT SE... 46 3.2 1
(AM635448) Entamoeba dispar GSS, clone dispar13h03.p1k. 46 3.2 1
(AM633106) Entamoeba dispar GSS, clone dispar98a10.q1k. 46 3.2 1
(CU165395) Equus caballus GSS, BAC clone CH241-288P11, T7 en... 46 3.2 1
(CU077846) Equus caballus GSS, BAC clone CH241-170H3, SP6 en... 46 3.2 1
(EB635548) AGENCOURT_55023997 D. mojavensis EST Drosophila m... 46 3.2 1
(EB585223) AGENCOURT_51918789 D. ananassae EST Drosophila an... 46 3.2 1
(DY677298) TT1AR43TH Tetrahymena thermophila EST library str... 46 3.2 1
(DW091058) CLPY2327.b1_M05.ab1 CLP(XYZ) lettuce perennis Lac... 46 3.2 1
(FC754909) CBBI8349.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 46 3.2 1
(FC681454) CAXX15442.fwd CAXX Lottia gigantea from male gona... 46 3.2 1
(FC639785) CAXU4418.fwd CAXU Lottia gigantea from female gon... 46 3.2 1
(FC639784) CAXU4418.rev CAXU Lottia gigantea from female gon... 46 3.2 1
(CP000885) Clostridium phytofermentans ISDg, complete genome. 46 3.2 1
(AC151399) Dasypus novemcinctus clone VMRC5-157N21, WORKING ... 40 3.2 4
(EJ002069) 1091120912671 Global-Ocean-Sampling_GS-26-01-01-1... 36 3.2 2
(AC214850) Pan troglodytes BAC clone CH251-618D4 from chromo... 34 3.2 7
(AC178250) Strongylocentrotus purpuratus clone R3-3086L3, WO... 36 3.3 6
(CU570859) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.4 8
(CS468878) Sequence 69 from Patent EP1748080. 36 3.6 12
(CS419355) Sequence 69 from Patent WO2006094836. 36 3.6 12
(ER588187) 1093016179233 Global-Ocean-Sampling_GS-36-01-01-2... 36 3.6 2
(BX511248) Zebrafish DNA sequence from clone CH211-173N20 in... 40 3.6 6
(BH162280) ENTTD60TR Entamoeba histolytica Sheared DNA Entam... 36 3.7 2
(AP008992) Bombyx mori genomic DNA, chromosome 27, BAC clone... 32 3.7 8
(AC154371) Mus musculus BAC clone RP23-102A13 from chromosom... 34 3.7 7
(AC026827) Homo sapiens chromosome 8, clone RP11-678C14, com... 34 3.7 8
(CP000883) Hemiselmis andersenii chromosome 3, complete sequ... 36 3.8 9
(EF622512) Fusarium proliferatum strain ITEM-2336 plasmid pF... 42 3.8 3
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 32 3.8 11
(EJ044232) 1095454111577 Global-Ocean-Sampling_GS-26-01-01-1... 36 3.9 2
(EK428257) 1095516059201 Global-Ocean-Sampling_GS-31-01-01-1... 38 3.9 2
(AL928641) Mouse DNA sequence from clone RP23-272N6 on chrom... 32 3.9 8
(AC143166) Macaca mulatta clone CH250-269E3, WORKING DRAFT S... 34 4.0 10
(CS468864) Sequence 55 from Patent EP1748080. 40 4.1 9
(CS419341) Sequence 55 from Patent WO2006094836. 40 4.1 9
(AC149004) Otolemur garnettii clone CH256-41B21, WORKING DRA... 34 4.1 8
(AC198305) Macaca mulatta clone CH250-15B13, WORKING DRAFT S... 34 4.1 9
(AC117623) Mus musculus chromosome 1, clone RP23-114L12, com... 34 4.2 7
(AC123808) Mus musculus BAC clone RP24-165O16 from chromosom... 36 4.2 6
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 30 4.3 13
(FP067386) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 4.3 9
(AP010802) Solanum lycopersicum DNA, chromosome 8, clone: C0... 34 4.3 7
(AC044786) Homo sapiens chromosome 10 clone RP11-56P5, compl... 34 4.3 6
(FB332198) Sequence 5 from Patent WO2007115213. 40 4.3 9
(CS448321) Sequence 5 from Patent WO2006117381. 40 4.3 9
(AM434971) Vitis vinifera, whole genome shotgun sequence, co... 42 4.4 2
(DE587389) Bombyx mori genomic DNA, Fosmid clone:GBMFno239_o... 32 4.5 3
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 34 4.5 12
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 32 4.5 12
(FB676003) Sequence 6 from Patent WO2007118704. 40 4.6 9
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 34 4.6 11
(ED851475) OA_CBa0002N23.r OA_CBa Oryza australiensis genomi... 34 4.7 3
(AX344553) Sequence 4 from Patent WO0200932. 32 4.7 10
(AC190479) Glycine tomentella clone gtd1-83o8, WORKING DRAFT... 32 4.7 8
(AC141733) Apis mellifera clone CH224-58F20, WORKING DRAFT S... 36 4.8 9
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 34 4.8 8
(AL034558) Plasmodium falciparum MAL3P2. 30 4.8 10
(AF301238) Homo sapiens chromosome 8 clone RP11-96B2 map 8q,... 36 4.9 7
(AC020639) Homo sapiens chromosome 3 clone RP11-32L10, WORKI... 36 4.9 10
(AC216315) Tupaia belangeri clone CH275-495D13, WORKING DRAF... 40 4.9 4
(AC171152) Atelerix albiventris clone LB4-128O5, WORKING DRA... 34 5.0 6
(X70810) Euglena gracilis chloroplast complete genome. 32 5.1 11
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 32 5.1 9
(CU606919) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 5.3 9
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g... 32 5.4 24
(AC011848) Homo sapiens chromosome 17, clone RP11-354C22, co... 36 5.4 8
(AC178877) Strongylocentrotus purpuratus clone R3-27F2, WORK... 38 5.4 9
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 34 5.5 12
(AC098915) Rattus norvegicus clone CH230-6A7, *** SEQUENCING... 40 5.6 7
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 5.7 12
(AC099504) Homo sapiens chromosome 5 clone RP11-219L6, compl... 32 5.7 10
(CT573507) Medicago truncatula chromosome 5 clone mth2-72p17... 34 5.7 8
(BX470163) Zebrafish DNA sequence from clone DKEY-27A9 in li... 34 5.8 2
(AC146058) Pan troglodytes BAC clone RP43-92A10 from chromos... 36 5.8 8
(AY842683) Calliphora augur voucher ABTC3187 NADH dehydrogen... 36 5.8 3
(AC185106) Canis Familiaris chromosome 7, clone XX-39N16, co... 34 5.8 2
(CT030124) Mouse DNA sequence from clone RP23-100B15 on chro... 36 5.8 8
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 36 5.8 11
(BX511140) Zebrafish DNA sequence from clone DKEY-264G21 in ... 36 5.9 8
(AY842728) Chrysomya rufifacies voucher ABTC3426 NADH dehydr... 36 5.9 3
(BX649525) Zebrafish DNA sequence from clone CH211-85E10 in ... 38 6.0 7
(AY842685) Calliphora centralis voucher ABTC78508 NADH dehyd... 36 6.0 3
(AC154904) Mus musculus BAC clone RP23-416C3 from chromosome... 34 6.0 9
(AY842693) Calliphora fulvicoxa voucher ABTC78480 NADH dehyd... 36 6.0 3
(CU651678) Zebrafish DNA sequence from clone CH73-47C13 in l... 36 6.0 5
(CQ594731) Sequence 22489 from Patent WO0171042. 38 6.0 3
(AY842701) Calliphora nigrithorax voucher ABTC78445 NADH deh... 36 6.0 3
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 32 6.0 12
(BX784024) Zebrafish DNA sequence from clone CH211-239J19 in... 34 6.1 2
(AY842708) Calliphora vicina voucher ABTC71190 NADH dehydrog... 36 6.1 3
(CT573146) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 6.1 2
(CU179751) Zebrafish DNA sequence from clone CH73-83K14 in l... 34 6.1 2
(AY842695) Calliphora gilesi voucher ABTC78482 NADH dehydrog... 36 6.1 3
(AY842694) Calliphora fuscofemorata voucher ABTC78504 NADH d... 36 6.1 3
(AR584244) Sequence 1 from patent US 6797466. 34 6.1 23
(AR271569) Sequence 1 from patent US 6503729. 34 6.1 23
(AY842727) Chrysomya rufifacies voucher ABTC78516 NADH dehyd... 36 6.1 3
(AY842682) Calliphora augur voucher ABTC78509 NADH dehydroge... 36 6.1 3
(AP004526) Lotus japonicus genomic DNA, chromosome 6, clone:... 34 6.1 2
(AC189234) Brassica rapa subsp. pekinensis clone KBrB014C24,... 34 6.1 7
(AC079348) Homo sapiens chromosome 8 clone RP11-353O11, WORK... 36 6.2 7
(AC134608) Mus musculus BAC clone RP23-68H13 from 13, comple... 36 6.2 8
(AL355612) Human DNA sequence from clone RP11-343P23 on chro... 38 6.3 6
(AM469979) Vitis vinifera contig VV78X005817.10, whole genom... 38 6.3 2
(AC210117) Macaca mulatta BAC CH250-162E11 (Children's Hosp... 32 6.3 8
(AM481091) Vitis vinifera, whole genome shotgun sequence, co... 34 6.4 2
(DQ855265) Glycine max clone BAC GM-WBb0040I14, *** SEQUENCI... 34 6.5 7
(AL035476) Plasmodium falciparum MAL4P3. 34 6.5 11
(AM445589) Vitis vinifera contig VV78X150427.15, whole genom... 32 6.5 2
(BX004756) Zebrafish DNA sequence from clone CH211-59A4 in l... 44 6.5 8
(DQ302100) Vanhornia eucnemidarum mitochondrion, complete ge... 30 6.6 6
(EI447371) PV_GBa0045I17.r PV_GBa Phaseolus vulgaris genomic... 38 6.7 3
(AC102481) Mus musculus chromosome 1, clone RP24-427A3, comp... 34 6.7 7
(AC079471) Mus musculus clone RP23-117M19, WORKING DRAFT SEQ... 36 6.7 5
(AP010783) Solanum lycopersicum DNA, chromosome 8, clone: C0... 36 6.7 8
(AM486091) Vitis vinifera contig VV78X219486.4, whole genome... 32 6.8 2
(AC110259) Mus musculus chromosome 5, clone RP23-287A8, comp... 32 6.9 10
(AC225451) Medicago truncatula clone mth2-154e9, WORKING DRA... 32 6.9 11
(AM489226) Vitis vinifera contig VV78X193224.8, whole genome... 32 6.9 2
(AM451719) Vitis vinifera contig VV78X012288.10, whole genom... 32 6.9 2
(AE001375) Plasmodium falciparum 3D7 chromosome 2 section 12... 30 6.9 6
(AM443706) Vitis vinifera contig VV78X199497.6, whole genome... 32 6.9 2
(AC079005) Homo sapiens chromosome 17, clone RP11-153K8, com... 32 7.0 6
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 32 7.0 23
(AY163547) Varroa destructor mitochondrion, complete genome. 32 7.0 4
(AM463117) Vitis vinifera contig VV78X048670.15, whole genom... 32 7.0 2
(AC026264) Homo sapiens chromosome 15 clone RP11-399O4 map 1... 40 7.1 9
(AC124237) Mus musculus chromosome 17, clone RP23-281A8, com... 30 7.1 9
(AC005916) Arabidopsis thaliana chromosome 1 BAC T17H3 seque... 34 7.1 4
(DE606712) Bombyx mori genomic DNA, Fosmid clone:GBMFno269_i... 32 7.1 3
(AM478001) Vitis vinifera contig VV78X092094.4, whole genome... 32 7.2 2
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 30 7.3 14
(AP007523) Lotus japonicus genomic DNA, chromosome 2, clone:... 32 7.4 6
(AL596262) Human DNA sequence from clone RP11-493O12 on chro... 36 7.4 4
(AC097524) Homo sapiens BAC clone RP11-604B8 from 4, complet... 42 7.4 5
(AM483945) Vitis vinifera contig VV78X048670.4, whole genome... 32 7.4 2
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 30 7.4 10
(BX119988) Zebrafish DNA sequence from clone CH211-184L6 in ... 34 7.5 8
(AC215469) Solanum lycopersicum chromosome 2 clone C02SLm000... 38 7.6 4
(EA074183) Sequence 1541 from patent US 7183083. 38 7.6 2
(AR887880) Sequence 1541 from patent US 7060458. 38 7.6 2
(CX572281) TTE00031700 Amplicon Express - Conjugative Form T... 38 7.6 2
(AL844507) Plasmodium falciparum chromosome 8. 38 7.6 6
(BF045873) BP250024A10H9 Soares normalized bovine placenta B... 38 7.7 2
(AC158350) Mus musculus chromosome 8, clone RP24-250A3, comp... 32 7.7 8
(AM485231) Vitis vinifera contig VV78X273371.4, whole genome... 34 7.7 2
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 7.7 11
(AX356494) Sequence 128 from Patent WO0181622. 36 7.8 7
(AX347027) Sequence 2098 from Patent WO0200928. 36 7.8 7
(AC213151) Populus trichocarpa clone POP014-H20, complete se... 34 7.9 6
(BX046121) Single read from an extremity of a full-length cD... 34 7.9 2
(AL035475) Plasmodium falciparum MAL4P2. 34 7.9 11
(ER499866) 1093015394258 Global-Ocean-Sampling_GS-35-01-01-1... 34 7.9 2
(FH335889) CHO_OF4273xd09r1.ab1 CHO_OF4 Nicotiana tabacum ge... 32 7.9 2
(BX053012) Single read from an extremity of a full-length cD... 34 7.9 2
(BX069164) Single read from an extremity of a full-length cD... 34 7.9 2
(CU459104) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 7.9 10
(BX039544) Single read from an extremity of a full-length cD... 34 7.9 2
(ER454547) 1092963863211 Global-Ocean-Sampling_GS-35-01-01-1... 34 7.9 2
(AL353072) Human DNA sequence from clone RP11-489C13 on chro... 32 8.0 10
(CT827815) Pan troglodytes chromosome X clone CH251-259D22 m... 34 8.0 8
(CT542293) A BAC library has been constructed from cultivar ... 32 8.0 2
(AL450164) Human DNA sequence from clone RP11-550L8 on chrom... 36 8.0 10
(BD428980) Method and nucleic acids for pharmacogenomic meth... 38 8.1 4
(AX348459) Sequence 154 from Patent WO0202806. 38 8.1 4
(BX538353) Cryptosporidium parvum chromosome 6, complete seq... 34 8.1 10
(ET687477) CHO_OF381xa13r1.ab1 CHO_OF Nicotiana tabacum geno... 42 8.3 2
(AA695144) GM02310.5prime GM Drosophila melanogaster ovary B... 38 8.3 2
(AC212381) Nomascus leucogenys chromosome UNK clone CH271-49... 36 8.3 8
(AC103670) Mus musculus clone RP24-283M24, WORKING DRAFT SEQ... 40 8.3 8
(AM645353) Entamoeba moshkovskii FIC GSS, clone mosh023e06.q1k. 36 8.4 2
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 34 8.4 10
(CE400409) tigr-gss-dog-17000334672604 Dog Library Canis lup... 40 8.4 2
(AL031745) Plasmodium falciparum DNA from MAL1P2. 36 8.5 10
(DY057838) 000801BAPA001077HT BAPA Bos taurus cDNA 5', mRNA ... 38 8.5 2
(AC153490) Mus musculus BAC RP23-210M12 (Roswell Park Cance... 34 8.7 9
(AC198579) Spermophilus tridecemlineatus clone VMRC20-604D19... 34 8.8 7
(CR524823) Zebrafish DNA sequence from clone CH211-150A18 in... 36 8.9 7
(BI606701) RH73335.5prime RH Drosophila melanogaster normali... 38 9.0 2
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 34 9.0 9
(AC180601) Strongylocentrotus purpuratus clone R3-3092M11, W... 34 9.0 7
(AJ505588) Dyscia simplicaria mitochondrion 16S rRNA gene (p... 28 9.0 4
(BI606297) RH72591.5prime RH Drosophila melanogaster normali... 38 9.1 2
(AC129238) Rattus norvegicus clone CH230-459A13, *** SEQUENC... 36 9.1 10
(BI617770) RH48206.5prime RH Drosophila melanogaster normali... 38 9.1 2
(BI481907) RE64529.5prime RE Drosophila melanogaster normali... 38 9.2 2
(AC103993) Homo sapiens chromosome 8, clone RP11-67H2, compl... 32 9.2 8
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 32 9.2 17
(AC058788) Mus musculus strain C57BL/6J clone rp23-284a9 map... 36 9.3 7
(BG637359) SD15296.5prime SD Drosophila melanogaster Schneid... 38 9.3 2
(CU914193) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 9.3 8
(AL671983) Mouse DNA sequence from clone RP23-232B3 on chrom... 40 9.4 5
(AP006417) Lotus japonicus genomic DNA, chromosome 4, clone:... 32 9.4 7
(CS468877) Sequence 68 from Patent EP1748080. 36 9.5 10
(CS419354) Sequence 68 from Patent WO2006094836. 36 9.5 10
(CK564383) rswpb0_009324.y1 swp Bombyx mori cDNA, mRNA seque... 32 9.5 3
(ET687416) CHO_OF381xa13f2.ab1 CHO_OF Nicotiana tabacum geno... 42 9.7 2
(ET687352) CHO_OF381xa13f1.ab1 CHO_OF Nicotiana tabacum geno... 42 9.7 2
(AL772331) Human DNA sequence *** SEQUENCING CANCELLED *** f... 32 9.7 10
(AL133327) Human DNA sequence from clone RP11-77F13 on chrom... 32 9.7 7
(FP086610) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 9.9 8
(AC193252) Pan troglodytes BAC clone CH251-638O14 from chrom... 40 9.9 7
(AL732368) Mouse DNA sequence from clone RP23-417N12 on chro... 38 9.9 9
(CU570703) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 10.0 9

>(AU033544) Dictyostelium discoideum slug cDNA, clone SLB151.
Length = 654

Score = 1021 bits (515), Expect(2) = 0.0
Identities = 523/526 (99%)
Strand = Plus / Plus


Query: 593 gttgggattttgcagaaaagaatggattcccaaaatttaataatgtacttttaccaagac 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6 gttgggattttgcagaaaagaatggattcccaaaatttaataatgtacttttaccaaggc 65


Query: 653 ataaaggtttacatgcatgtgttgaaccattaagagatacaattgattgtgtatatgatt 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ataaaggtttacatgcatgtgttgaaccattaagagatacaattgattgtgtatatgatt 125


Query: 713 taacaatcggttatgaaggtaaaccaaccattttatcatgtattagtggaacaagtccaa 772
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tcacaatcggttatgaaggtaaaccaaccattttatcatgtattagtggaacaagtccaa 185


Query: 773 gagttgtaaatattcatattaagagatattcacttgatgaaattccaaaggatgaaaacc 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gagttgtaaatattcatattaagagatattcacttgatgaaattccaaaggatgaaaacc 245


Query: 833 aacttcaaaaatggttatttaatcgttatcatgaaaaagatcaaatgttacaatacttaa 892
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 246 aacttcaaaaatggttatttaatcgttatcatgaaaaagntcaaatgttacaatacttaa 305


Query: 893 aagaaaataaaacttattcaatgccatatagaattcataaaccttcattatcaatttatg 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aagaaaataaaacttattcaatgccatatagaattcataaaccttcattatcaatttatg 365


Query: 953 catcagcatttttatggttttattactttatgttaccaatcaccaatttacttttaattt 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 catcagcatttttatggttttattactttatgttaccaatcaccaatttacttttaattt 425


Query: 1013 cttcatttacaagagtgtactttatcatagcatttgtttatcacattttaaattcaaaat 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cttcatttacaagagtgtactttatcatagcatttgtttatcacattttaaattcaaaat 485


Query: 1073 atgaaccacttcgtaaattaagaggattacaaaatgcaatttattc 1118
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atgaaccacttcgtaaattaagaggattacaaaatgcaatttattc 531

Score = 99.6 bits (50), Expect(2) = 0.0
Identities = 50/50 (100%)
Strand = Plus / Plus


Query: 1132 tctcattaaataaataaatattgatttggaaattaggattttgtttagat 1181
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tctcattaaataaataaatattgatttggaaattaggattttgtttagat 594

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,718,903,176
Number of extensions: 122095436
Number of successful extensions: 13649023
Number of sequences better than 10.0: 384
Length of query: 1248
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1224
Effective length of database: 96,409,374,237
Effective search space: 118005074066088
Effective search space used: 118005074066088
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15440-1 (Contig-U15440-1Q) /CSM_Contig/Contig-U15440-1Q.Seq.d
(1248 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q9LHN4) RecName: Full=Probable 1-acyl-sn-glycerol-3-phosphate a... 179 2e-43
EU591535_1(EU591535|pid:none) Ricinus communis 1-acyl-sn-glycero... 179 2e-43
AM451880_2(AM451880|pid:none) Vitis vinifera contig VV78X180097.... 176 2e-42
AK103516_1(AK103516|pid:none) Oryza sativa Japonica Group cDNA c... 169 2e-40
AP003368_18(AP003368|pid:none) Oryza sativa Japonica Group genom... 169 2e-40
(Q8L4Y2) RecName: Full=Probable 1-acyl-sn-glycerol-3-phosphate a... 165 3e-39
AC008263_2(AC008263|pid:none) Arabidopsis thaliana chromosome 1 ... 165 3e-39
BT043042_1(BT043042|pid:none) Zea mays full-length cDNA clone ZM... 165 4e-39
EU963283_1(EU963283|pid:none) Zea mays clone 260373 unknown mRNA. 165 4e-39
EU972993_1(EU972993|pid:none) Zea mays clone 391363 1-acyl-sn-gl... 165 4e-39
BT060863_1(BT060863|pid:none) Zea mays full-length cDNA clone ZM... 165 4e-39
AC130597_11(AC130597|pid:none) Oryza sativa (japonica cultivar-g... 164 6e-39
(Q6UWP7) RecName: Full=Lysocardiolipin acyltransferase 1; ... 153 1e-35
BC146817_1(BC146817|pid:none) Homo sapiens lysocardiolipin acylt... 153 1e-35
AK302562_1(AK302562|pid:none) Homo sapiens cDNA FLJ61482 complet... 153 1e-35
AX356164_1(AX356164|pid:none) Sequence 1 from Patent WO0200857. 151 5e-35
FJ424708_1(FJ424708|pid:none) Sus scrofa 1-acylglycerol-3-phosph... 148 3e-34
AK144580_1(AK144580|pid:none) Mus musculus lung RCB-0558 LLC cDN... 146 1e-33
BC049474_1(BC049474|pid:none) Danio rerio 1-acylglycerol-3-phosp... 144 7e-33
AK296965_1(AK296965|pid:none) Homo sapiens cDNA FLJ50983 complet... 144 7e-33
(Q6NYV8) RecName: Full=Lysocardiolipin acyltransferase; ... 142 2e-32
BT063406_1(BT063406|pid:none) Zea mays full-length cDNA clone ZM... 142 3e-32
EU960140_1(EU960140|pid:none) Zea mays clone 222110 1-acyl-sn-gl... 142 3e-32
AF016452_18(AF016452|pid:none) Caenorhabditis elegans cosmid T05... 140 1e-31
(Q9XFW4) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 140 1e-31
BC056788_1(BC056788|pid:none) Danio rerio 1-acylglycerol-3-phosp... 140 1e-31
BC124532_1(BC124532|pid:none) Danio rerio zgc:154071, mRNA (cDNA... 139 2e-31
S60478(S60478) probable 1-acyl-sn-glycerol-3-phosphate acyltrans... 139 2e-31
AC143341_13(AC143341|pid:none) Medicago truncatula clone mth2-7a... 139 3e-31
AM920435_97(AM920435|pid:none) Penicillium chrysogenum Wisconsin... 139 3e-31
EF208088_1(EF208088|pid:none) Crambe hispanica subsp. abyssinica... 137 1e-30
AM458513_1(AM458513|pid:none) Vitis vinifera contig VV78X127444.... 136 2e-30
DQ213353_1(DQ213353|pid:none) Taeniopygia guttata clone 0063P001... 135 3e-30
BT026036_1(BT026036|pid:none) Arabidopsis thaliana At3g57650 mRN... 135 3e-30
(Q9SYC8) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 135 3e-30
EU960209_1(EU960209|pid:none) Zea mays clone 222571 unknown mRNA. 134 9e-30
AP007150_567(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 133 1e-29
CR848431_1(CR848431|pid:none) Xenopus tropicalis finished cDNA, ... 133 2e-29
CQ891252_1(CQ891252|pid:none) Sequence 18 from Patent WO20040879... 132 3e-29
EF514399_1(EF514399|pid:none) Helianthus annuus lysophosphatidyl... 131 6e-29
CR857180_1(CR857180|pid:none) Pongo abelii mRNA; cDNA DKFZp469J1... 130 8e-29
BC068519_1(BC068519|pid:none) Homo sapiens 1-acylglycerol-3-phos... 130 1e-28
(Q9NUQ2) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 130 1e-28
BT059719_1(BT059719|pid:none) Salmo salar clone ssal-rgf-541-077... 130 1e-28
BC122693_1(BC122693|pid:none) Bos taurus 1-acylglycerol-3-phosph... 129 2e-28
BC081323_1(BC081323|pid:none) Xenopus tropicalis agpat3 protein,... 129 3e-28
EU591533_1(EU591533|pid:none) Ricinus communis 1-acyl-sn-glycero... 128 5e-28
Z72511_4(Z72511|pid:none) Caenorhabditis elegans Cosmid F55A11, ... 128 5e-28
CR380955_190(CR380955|pid:none) Candida glabrata strain CBS138 c... 128 5e-28
(Q9D1E8) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 127 6e-28
AE014296_2883(AE014296|pid:none) Drosophila melanogaster chromos... 126 1e-27
AF213937_1(AF213937|pid:none) Prunus dulcis 1-acyl-sn-glycerol-3... 125 3e-27
FJ439668_1(FJ439668|pid:none) Sus scrofa 1-acylglycerol-3-phosph... 125 3e-27
AF479037_1(AF479037|pid:none) Triticum aestivum 1-acy1-glycerol-... 124 5e-27
(Q8K4X7) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 124 5e-27
BC087973_1(BC087973|pid:none) Xenopus tropicalis 1-acylglycerol-... 124 7e-27
BT020709_1(BT020709|pid:none) Bos taurus 1-acylglycerol-3-phosph... 124 9e-27
FJ439667_1(FJ439667|pid:none) Sus scrofa 1-acylglycerol-3-phosph... 124 9e-27
BT020691_1(BT020691|pid:none) Bos taurus 1-acylglycerol-3-phosph... 124 9e-27
BC071000_1(BC071000|pid:none) Xenopus laevis hypothetical protei... 124 9e-27
FN392319_847(FN392319|pid:none) Pichia pastoris GS115 chromosome... 123 2e-26
FJ439666_1(FJ439666|pid:none) Sus scrofa 1-acylglycerol-3-phosph... 122 3e-26
(O94361) RecName: Full=Uncharacterized acyltransferase C428.14; ... 120 8e-26
AM494954_93(AM494954|pid:none) Leishmania braziliensis chromosom... 120 1e-25
BC158873_1(BC158873|pid:none) Rattus norvegicus 1-acylglycerol-3... 120 1e-25
BT080278_1(BT080278|pid:none) Caligus clemensi clone ccle-evs-51... 120 1e-25
AE016816_33(AE016816|pid:none) Ashbya gossypii (= Eremothecium g... 119 2e-25
AY358704_1(AY358704|pid:none) Homo sapiens clone DNA71213 AGPAT3... 119 2e-25
(Q5RA57) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 119 2e-25
AK030607_1(AK030607|pid:none) Mus musculus adult male pituitary ... 118 4e-25
(Q9D517) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 118 4e-25
(Q4R581) RecName: Full=1-acyl-sn-glycerol-3-phosphate acyltransf... 118 5e-25
U64839_1(U64839|pid:none) Caenorhabditis elegans cosmid ZK40, co... 117 9e-25
AF156775_1(AF156775|pid:none) Homo sapiens lysophosphatidic acid... 117 1e-24
AL832919_1(AL832919|pid:none) Homo sapiens mRNA; cDNA DKFZp762M1... 117 1e-24
T34057(T34057)hypothetical protein F28B3.5 - Caenorhabditis eleg... 116 1e-24
T25998(T25998)hypothetical protein ZK40.1 - Caenorhabditis elegans 116 1e-24
CU928167_337(CU928167|pid:none) Kluyveromyces thermotolerans str... 115 3e-24
CR382122_274(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 114 6e-24
CU928173_144(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 114 7e-24
T22689(T22689)hypothetical protein F55A11.5 - Caenorhabditis ele... 113 1e-23
T07936(T07936) probable glycerol-3-phosphate O-acyltransferase (... 112 3e-23
CP001326_39(CP001326|pid:none) Micromonas sp. RCC299 chromosome ... 110 1e-22
BT051949_1(BT051949|pid:none) Medicago truncatula clone MTYF9_FA... 110 1e-22
(P38226) RecName: Full=Uncharacterized acyltransferase CST26; ... 110 1e-22
AL049660_16(AL049660|pid:none) Arabidopsis thaliana DNA chromoso... 108 4e-22
AK297262_1(AK297262|pid:none) Homo sapiens cDNA FLJ57322 complet... 108 5e-22
AK095284_1(AK095284|pid:none) Homo sapiens cDNA FLJ37965 fis, cl... 106 2e-21
AY811417_1(AY811417|pid:none) Schistosoma japonicum SJCHGC05680 ... 105 3e-21
AC091655_15(AC091655|pid:none) Trypanosoma brucei chromosome 5 c... 105 3e-21
AM428744_3(AM428744|pid:none) Vitis vinifera contig VV78X081005.... 93 2e-17
FM992693_114(FM992693|pid:none) Candida dubliniensis CD36 chromo... 93 2e-17
EF585918_1(EF585918|pid:none) Sonneratia ovata isolate Sonn498_3... 91 7e-17
BT048835_1(BT048835|pid:none) Salmo salar clone ssal-plnb-512-37... 91 9e-17
EF585916_1(EF585916|pid:none) Sonneratia alba isolate Sonn498_1 ... 91 1e-16
AL590444_128(AL590444|pid:none) chromosome IV of strain GB-M1 of... 89 4e-16
CQ891238_1(CQ891238|pid:none) Sequence 4 from Patent WO2004087902. 88 6e-16
BX294171_2(BX294171|pid:none) Zebrafish DNA sequence from clone ... 88 7e-16
AB172391_1(AB172391|pid:none) Macaca fascicularis brain cDNA clo... 80 1e-13
FN357350_31(FN357350|pid:none) Schistosoma mansoni genome sequen... 76 2e-12
CP001139_2566(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 70 1e-10
AL590449_125(AL590449|pid:none) chromosome X of strain GB-M1 of ... 69 4e-10
AF003384_1(AF003384|pid:none) Caenorhabditis elegans cosmid K07B... 66 2e-09
(Q11087) RecName: Full=Putative 1-acyl-sn-glycerol-3-phosphate a... 64 9e-09
(Q92604) RecName: Full=Acyl-CoA:lysophosphatidylglycerol acyltra... 64 1e-08
D86960_1(D86960|pid:none) Homo sapiens mRNA for KIAA0205 gene, p... 64 1e-08
CP001322_3165(CP001322|pid:none) Desulfatibacillum alkenivorans ... 63 2e-08
FM954973_150(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 63 2e-08
BT025436_1(BT025436|pid:none) Bos taurus 1-acylglycerol-3-phosph... 63 3e-08
FN392322_747(FN392322|pid:none) Pichia pastoris GS115 chromosome... 61 7e-08
AJ720154_1(AJ720154|pid:none) Gallus gallus mRNA for hypothetica... 61 1e-07
CR382136_858(CR382136|pid:none) Debaryomyces hansenii chromosome... 60 2e-07
CP000777_2494(CP000777|pid:none) Leptospira biflexa serovar Pato... 60 2e-07
BC098616_1(BC098616|pid:none) Danio rerio si:dkey-30h14.2, mRNA ... 60 2e-07
BX248403_2(BX248403|pid:none) Zebrafish DNA sequence from clone ... 60 2e-07
FM178379_43(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ch... 59 3e-07
FM992690_194(FM992690|pid:none) Candida dubliniensis CD36 chromo... 59 4e-07
AK172914_1(AK172914|pid:none) Mus musculus mRNA for mKIAA0205 pr... 58 8e-07
BC024750_1(BC024750|pid:none) Mus musculus lysophosphatidylglyce... 58 8e-07
BC060749_1(BC060749|pid:none) Xenopus laevis hypothetical protei... 58 8e-07
CP000444_317(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 57 1e-06
CR382128_472(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 56 2e-06
CP000931_3925(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 56 3e-06
CP001252_3873(CP001252|pid:none) Shewanella baltica OS223, compl... 55 4e-06
CP000388_4021(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 55 5e-06
AE003852_33(AE003852|pid:none) Vibrio cholerae O1 biovar eltor s... 55 7e-06
AY383668_1(AY383668|pid:none) Rattus norvegicus LRRGT00013 mRNA,... 55 7e-06
AM181176_5524(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 55 7e-06
CP000503_3732(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 55 7e-06
CP000753_3964(CP000753|pid:none) Shewanella baltica OS185, compl... 54 9e-06
CP001103_3600(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 54 9e-06
AK295025_1(AK295025|pid:none) Homo sapiens cDNA FLJ58844 complet... 54 2e-05
CP000961_407(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 54 2e-05
AE004091_463(AE004091|pid:none) Pseudomonas aeruginosa PAO1, com... 53 2e-05
CP000447_416(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 53 2e-05
CP000462_4048(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 53 2e-05
CP000821_4164(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 53 3e-05
CP000644_99(CP000644|pid:none) Aeromonas salmonicida subsp. salm... 53 3e-05
CP001087_3149(CP001087|pid:none) Desulfobacterium autotrophicum ... 52 3e-05
CP000926_353(CP000926|pid:none) Pseudomonas putida GB-1, complet... 52 3e-05
CP000789_360(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 52 3e-05
CP000472_325(CP000472|pid:none) Shewanella piezotolerans WP3, co... 51 8e-05
CP000712_351(CP000712|pid:none) Pseudomonas putida F1, complete ... 50 1e-04
CP000304_1112(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 50 2e-04
AM286690_2492(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 50 2e-04
CP000926_74(CP000926|pid:none) Pseudomonas putida GB-1, complete... 49 3e-04
BC149950_1(BC149950|pid:none) Bos taurus lysocardiolipin acyltra... 49 3e-04
CP000478_1976(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 49 4e-04
CP000235_1233(CP000235|pid:none) Anaplasma phagocytophilum HZ, c... 49 4e-04
CR954246_2767(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 49 4e-04
T15252(T15252)hypothetical protein K07B1.5 - Caenorhabditis eleg... 49 4e-04
AE015451_58(AE015451|pid:none) Pseudomonas putida KT2440 complet... 49 5e-04
CP000949_77(CP000949|pid:none) Pseudomonas putida W619, complete... 48 8e-04
CP000931_3926(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 48 8e-04
CP001503_2908(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 48 8e-04
AK299721_1(AK299721|pid:none) Homo sapiens cDNA FLJ50644 complet... 47 0.001
CP000151_2842(CP000151|pid:none) Burkholderia sp. 383 chromosome... 47 0.001
CP000103_547(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 47 0.001
CP000958_2710(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 47 0.001
CP000086_579(CP000086|pid:none) Burkholderia thailandensis E264 ... 47 0.002
BA000037_3237(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 46 0.003
AE016795_978(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 46 0.003
CP000614_2768(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 46 0.003
CP000440_2746(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 46 0.003
CP000512_4097(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 46 0.003
CP000378_2077(CP000378|pid:none) Burkholderia cenocepacia AU 105... 46 0.003
CP001025_2595(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 46 0.003
CP000269_423(CP000269|pid:none) Janthinobacterium sp. Marseille,... 45 0.004
CP000851_328(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 45 0.005
CP000352_2725(CP000352|pid:none) Ralstonia metallidurans CH34, c... 45 0.005
AP009385_2611(AP009385|pid:none) Burkholderia multivorans ATCC 1... 45 0.005
CP000075_4723(CP000075|pid:none) Pseudomonas syringae pv. syring... 45 0.005
BX571965_675(BX571965|pid:none) Burkholderia pseudomallei strain... 44 0.009
BX640411_35(BX640411|pid:none) Bordetella pertussis strain Toham... 44 0.009
CP001107_526(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 44 0.009
BX640434_115(BX640434|pid:none) Bordetella parapertussis strain ... 44 0.009
CU914168_562(CU914168|pid:none) Ralstonia solanacearum strain IP... 44 0.012
AE016828_28(AE016828|pid:none) Coxiella burnetii RSA 493, comple... 44 0.012
CU207211_352(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 44 0.012
CR555306_720(CR555306|pid:none) Azoarcus sp. EbN1 complete genome. 44 0.012
CP000890_1887(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 44 0.012
AL954747_1185(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 44 0.012
CP000680_11(CP000680|pid:none) Pseudomonas mendocina ymp, comple... 44 0.012
CP000884_1288(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 43 0.021
CP000075_1005(CP000075|pid:none) Pseudomonas syringae pv. syring... 43 0.027
A83645(A83645) probable acyltransferase PA0005 [imported] - Pseu... 43 0.027
FM209186_5(FM209186|pid:none) Pseudomonas aeruginosa LESB58 comp... 43 0.027
(P32129) RecName: Full=Probable acyltransferase yihG; E... 43 0.027
AP006841_3144(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 42 0.035
CP000243_4352(CP000243|pid:none) Escherichia coli UTI89, complet... 42 0.046
CP000826_4870(CP000826|pid:none) Serratia proteamaculans 568, co... 42 0.046
CP001281_837(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 42 0.046
CP000507_3281(CP000507|pid:none) Shewanella amazonensis SB2B, co... 42 0.046
FM180568_4169(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 42 0.046
CU928161_4125(CU928161|pid:none) Escherichia coli S88 chromosome... 42 0.046
CP000090_505(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 42 0.046
CP000542_2120(CP000542|pid:none) Verminephrobacter eiseniae EF01... 42 0.060
CP000266_3379(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 42 0.060
CP001164_4767(CP001164|pid:none) Escherichia coli O157:H7 str. E... 42 0.060
AE016853_183(AE016853|pid:none) Pseudomonas syringae pv. tomato ... 42 0.060
CU928162_4437(CU928162|pid:none) Escherichia coli ED1a chromosom... 42 0.060
CP001063_3737(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 42 0.060
AE014075_4707(AE014075|pid:none) Escherichia coli CFT073, comple... 42 0.060
CP000038_3755(CP000038|pid:none) Shigella sonnei Ss046, complete... 42 0.060
AE005674_3935(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 42 0.060
CP000800_4173(CP000800|pid:none) Escherichia coli E24377A, compl... 42 0.060
CT573326_12(CT573326|pid:none) Pseudomonas entomophila str. L48 ... 41 0.079
AL109942_4(AL109942|pid:none) Human DNA sequence from clone RP3-... 41 0.079
AC2620(AC2620) 1-acyl-sn-glycerol-3-phosphate acyltransferase pl... 41 0.10
CP000076_11(CP000076|pid:none) Pseudomonas fluorescens Pf-5, com... 41 0.10
CP001010_814(CP001010|pid:none) Polynucleobacter necessarius sub... 41 0.10
CP000058_1012(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 41 0.10
CP000744_5(CP000744|pid:none) Pseudomonas aeruginosa PA7, comple... 40 0.13
CP000107_42(CP000107|pid:none) Ehrlichia canis str. Jake, comple... 40 0.13
CP000030_860(CP000030|pid:none) Anaplasma marginale str. St. Mar... 40 0.13
CP000034_3586(CP000034|pid:none) Shigella dysenteriae Sd197, com... 40 0.13
CP000524_43(CP000524|pid:none) Bartonella bacilliformis KC583, c... 40 0.17
AM260479_517(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 40 0.17
CP000282_11(CP000282|pid:none) Saccharophagus degradans 2-40, co... 40 0.17
CP000284_641(CP000284|pid:none) Methylobacillus flagellatus KT, ... 40 0.17
CU928158_3493(CU928158|pid:none) Escherichia fergusonii ATCC 354... 40 0.23
AE015928_243(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 40 0.23
CP000822_3063(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 39 0.30
AL646052_522(AL646052|pid:none) Ralstonia solanacearum GMI1000 c... 39 0.30
AE016853_1137(AE016853|pid:none) Pseudomonas syringae pv. tomato... 39 0.30
AE017344_223(AE017344|pid:none) Cryptococcus neoformans var. neo... 39 0.30
CP000529_442(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 39 0.39
CU633749_470(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 39 0.39
CP000539_524(CP000539|pid:none) Acidovorax sp. JS42, complete ge... 39 0.39
CR767821_58(CR767821|pid:none) Ehrlichia ruminantium strain Welg... 39 0.39
CP001339_3217(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 39 0.39
(Q9US20) RecName: Full=Uncharacterized acyltransferase C1851.02;... 39 0.39
CP000109_356(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ... 39 0.39
CP000655_1576(CP000655|pid:none) Polynucleobacter necessarius su... 39 0.51
CP000555_3369(CP000555|pid:none) Methylibium petroleiphilum PM1,... 38 0.66
CP001097_2250(CP001097|pid:none) Chlorobium limicola DSM 245, co... 38 0.66
CP001154_747(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 38 0.66
CP001056_3376(CP001056|pid:none) Clostridium botulinum B str. Ek... 38 0.66
CP000155_5048(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 38 0.66
CP001562_1698(CP001562|pid:none) Bartonella grahamii as4aup, com... 38 0.87
CP001078_3156(CP001078|pid:none) Clostridium botulinum E3 str. A... 38 0.87
CP001172_2686(CP001172|pid:none) Acinetobacter baumannii AB307-0... 37 1.1
AJ235271_236(AJ235271|pid:none) Rickettsia prowazekii strain Mad... 37 1.1
CP000075_9(CP000075|pid:none) Pseudomonas syringae pv. syringae ... 37 1.1
AL646053_1366(AL646053|pid:none) Ralstonia solanacearum GMI1000 ... 37 1.1
AM902716_3457(AM902716|pid:none) Bordetella petrii strain DSM 12... 37 1.1
CP000863_834(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 37 1.1
CP000934_54(CP000934|pid:none) Cellvibrio japonicus Ueda107, com... 37 1.1
CP001281_3280(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 37 1.1
CP000521_916(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 37 1.1
CP001104_156(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 37 1.1
CP000453_9(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1, ... 37 1.5
CR925677_45(CR925677|pid:none) Ehrlichia ruminantium str. Gardel... 37 1.5
CR555306_3172(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 37 1.9
CU928175_36(CU928175|pid:none) Zygosaccharomyces rouxii strain C... 37 1.9
CP000090_1444(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 37 1.9
CP000555_484(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 36 2.5
CP000822_4775(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 36 2.5
CQ874850_1(CQ874850|pid:none) Sequence 5 from Patent WO200407661... 36 2.5
AE000512_1666(AE000512|pid:none) Thermotoga maritima MSB8, compl... 36 2.5
(Q22267) RecName: Full=Putative 1-acyl-sn-glycerol-3-phosphate a... 36 2.5
CP000655_1856(CP000655|pid:none) Polynucleobacter necessarius su... 36 3.3
A81957(A81957) 1-acylglycerol-3-phosphate O-acyltransferase (EC ... 36 3.3
CP001635_4683(CP001635|pid:none) Variovorax paradoxus S110 chrom... 36 3.3
CP000325_4094(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 35 4.3
AE004969_1897(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 35 4.3
EF554099_1(EF554099|pid:none) Human rotavirus A strain MG6 NSP1 ... 35 4.3
EF554110_1(EF554110|pid:none) Human rotavirus A strain Hun5 NSP1... 35 4.3
CP001601_2383(CP001601|pid:none) Corynebacterium aurimucosum ATC... 35 5.6
CP001157_8(CP001157|pid:none) Azotobacter vinelandii DJ, complet... 35 5.6
CR378675_119(CR378675|pid:none) Photobacterium profundum SS9 chr... 35 5.6
CP001032_2102(CP001032|pid:none) Opitutus terrae PB90-1, complet... 35 5.6
CP000896_661(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 35 5.6
AM747720_3142(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 35 5.6
CP000812_322(CP000812|pid:none) Thermotoga lettingae TMO, comple... 35 5.6
CP000958_837(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 35 5.6
CP001068_608(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 35 5.6
AE015928_1014(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 35 5.6
DQ415067_1(DQ415067|pid:none) Disa intermedia voucher Bytebier 2... 35 7.3
FJ495130_1(FJ495130|pid:none) Rotavirus A sable antelope/G6P[14]... 35 7.3
CP000821_4165(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 35 7.3
CQ874852_1(CQ874852|pid:none) Sequence 7 from Patent WO200407661... 35 7.3
CP000766_748(CP000766|pid:none) Rickettsia rickettsii str. Iowa,... 35 7.3
DQ415066_1(DQ415066|pid:none) Disa stachyoides voucher Bytebier ... 35 7.3
CP000269_2945(CP000269|pid:none) Janthinobacterium sp. Marseille... 34 9.6
CP000359_1893(CP000359|pid:none) Deinococcus geothermalis DSM 11... 34 9.6
CP000378_383(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 34 9.6
CP000683_577(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 34 9.6
CP000115_578(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,... 34 9.6

>(Q9LHN4) RecName: Full=Probable 1-acyl-sn-glycerol-3-phosphate
acyltransferase 5; EC=2.3.1.51; AltName:
Full=Lysophosphatidyl acyltransferase 5;
&AP002039_2(AP002039|pid:none)
&AY099849_1(AY099849|pid:none)
&BT008462_1(BT008462|pid:none)
Length = 375

Score = 179 bits (454), Expect = 2e-43
Identities = 103/313 (32%), Positives = 166/313 (53%), Gaps = 3/313 (0%)
Frame = +1

Query: 124 FLMFPVIALIEPFYKKLAFKLQAKIASGWFRLVLFVFEVLNGIEIRYYGEDDIQEGESII 303
FL V+ L Y + K + W L F+FE +N ++ + G D + + ++
Sbjct: 40 FLSAVVLRLFSIRYSR---KCVSFFFGSWLALWPFLFEKINKTKVIFSG-DKVPCEDRVL 95

Query: 304 MMMNHPSEIDWLFSFSIAQRKKALSNIKVLLKNEVRFVPGVGWGCDNLDYIFLTRDWTFD 483
++ NH +E+DW++ + +A RK + NIK +LK+ + +P GW ++I + R W D
Sbjct: 96 LIANHRTEVDWMYFWDLALRKGQIGNIKYVLKSSLMKLPLFGWAFHLFEFIPVERRWEVD 155

Query: 484 ENHIEYKINKYKESECKPWLVIFPEGTDIDDVKLKKSWDFAEKNGFPKFNNVLLPRHKGL 663
E ++ ++ +K+ WL +FPEGTD + K ++S FA +NG P NNVLLPR KG
Sbjct: 156 EANLRQIVSSFKDPRDALWLALFPEGTDYTEAKCQRSKKFAAENGLPILNNVLLPRTKGF 215

Query: 664 HACVEPLRDTIDCVYDLTIGYEGK-PTILSCISGTSPRVVNIHIKRYSLDEIPKDENQLQ 840
+C++ L ++D VYD+TIGY+ + P+ L + G P V+IHI+R +L +IP E +
Sbjct: 216 VSCLQELSCSLDAVYDVTIGYKTRCPSFLDNVYGIEPSEVHIHIRRINLTQIPNQEKDIN 275

Query: 841 KWLFNRYHEKDQMLQYLKENKTYSMPYRIHKPSLSIYASAFLWFYYFMLPITNLLLISS- 1017
WL N + KDQ+L N + + + Y L F T+L SS
Sbjct: 276 AWLMNTFQLKDQLLNDFYSNGHFPNEGTEKEFNTKKYLINCLAVIAFTTICTHLTFFSSM 335

Query: 1018 -FTRVYFIIAFVY 1053
+ R+Y +A VY
Sbjct: 336 IWFRIYVSLACVY 348

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,815,603,605
Number of extensions: 36185331
Number of successful extensions: 93068
Number of sequences better than 10.0: 289
Number of HSP's gapped: 92724
Number of HSP's successfully gapped: 302
Length of query: 416
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 285
Effective length of database: 627,191,635
Effective search space: 178749615975
Effective search space used: 178749615975
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.59 gvh: 0.67 alm: 0.23 top: 0.60 tms: 0.13 mit: 0.32 mip: 0.00
nuc: 0.41 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 1.00 m_ : 0.00

32.0 %: endoplasmic reticulum
24.0 %: plasma membrane
16.0 %: nuclear
8.0 %: vacuolar
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: cytoplasmic

>> prediction for Contig-U15440-1 is end

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 3
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 1
FC (DIR, S) 1
FC-IC (SUB) 0