Contig-U03011-1
Contig ID Contig-U03011-1
Contig update 2001. 8.29
Contig sequence
>Contig-U03011-1 (Contig-U03011-1Q) /CSM_Contig/Contig-U03011-1Q.Seq.d
CAAATTTCAATTTTTAATATCAAACAAAACTTAAATTTTTTAAACATCAA
AACAAACTCAAATTTAAATGCCAATTATGTCAACAGAAATTTTTAACGAA
GCAGATGCAGGATTTGTATATCAATCCAACTCAAATGATTATTCAGATGG
ATTTGAAGGACCAGAAAAGAAATTAGATATTAGATTCGGTCCAATTAGTA
AAGGTAGCGTTAAATCAATTGCAGGTAGCCCAAGTAAGGTTGGATTACGT
ACAATTGATAAGGAGAAATGGCAAACAGTATTAGATTCAGCAAGATGTAC
AATCATTAGTCAAACCAGTAATGATCATATGGATAGCTATGTTTTATCAG
AATCAAGTTTATTCGTTTATCCACGTCGTGCAATGATTAAAACCTGTGGT
ACCACCACTTTGTTACACTTGATCGCTAAAATGGTTCAAGTAGGTAAAGA
ATGTGGTCTTGAAGTTGAGATGGTTGTTTTCTCTAGAAAGAATTTAAATC
AACCATCCAAACAAGTCTTTCCACATTGTTCATTCTCTGATGAAGTAAAC
TTTCTCAACAAGATTTTCGATGGTCAAGCCTATGTTATGGGTGACGTCAA
CAAGGACCACTGGAATTTGTATATCGCCGATTTCAGAAAGAATCCAACCC
TCCAAAGAACTGAACAAACCTTTGAGGTTATGATGCACGATCTCGATGAA
ACTGTTATGAAACAATTTTTCAAGCGTGAAGGTGTATCAGCTTGGGATAC
AACCGTCAACAGTGGTATTGCCGACCTTTTGCCAGGTTCAATGATTGATG
ATTTCCAATTTGATCCTTGTGGTTACTCAATGAATGGTCTTCTCAATGAA
TTTTATTGGACTATTCATATCACACCAGAATCACATTGTAGCTATGTATC
ATTTGACACCAATGTAGCTCTCGCAGATTACAATCAATTGTTGGCAAAGG
TTTTAAATGTTTTCAAACCAGGTCGTTTCACAGCTGCACTCTATGCCGAA
GATGGTGCTCCATGTGGAGATCCTTACACTGCTTTCGATGTCAATGTCCC
TTCCTATGCAATTCAAAATAAAACTGTACATGGTTTTGATGGTGGTTATG
ATGTTGTTGTTTCAAATTATCAACAATTGGATAAAAAAGTGAATTTTTCA
AATGATGATTTAATTCAATCAATCGAATCAACTAATATTGATTTAATTCA
AGTTTAAAAAATAATTAATAATAATAATAATTAATAATAATAATATATAA
TAATATCAATAATTCATATAATTTAGTTTTAGAGATATAGTTAATATATA
CAAATATTTTATTATCATTCACTTTCAAAATTTATAAAAAAAAA

Gap no gap
Contig length 1344
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 5490289
End point 5491633
Strand (PLUS/MINUS) PLUS
Number of clones 3
Number of EST 5
Link to clone list U03011
List of clone(s)

est1=AFO151F,1,605
est2=SLE633F,329,947
est3=AFO151Z,676,1277
est4=VSH861F,972,1345
est5=VSH861Z,1006,1281
Translated Amino Acid sequence
kfqflisnkt*if*tskqtqi*MPIMSTEIFNEADAGFVYQSNSNDYSDGFEGPEKKLDI
RFGPISKGSVKSIAGSPSKVGLRTIDKEKWQTVLDSARCTIISQTSNDHMDSYVLSESSL
FVYPRRAMIKTCGTTTLLHLIAKMVQVGKECGLEVEMVVFSRKNLNQPSKQVFPHCSFSD
EVNFLNKIFDGQAYVMGDVNKDHWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFF
KREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVS
FDTNVALADYNQLLAKVLNVFKPGRFTAALYAEDGAPCGDPYTAFDVNVPSYAIQNKTVH
GFDGGYDVVVSNYQQLDKKVNFSNDDLIQSIESTNIDLIQV*kiinnnnn****yiiisi
ihii*f*rys*yiqifyyhslskfikk


Translated Amino Acid sequence (All Frames)
Frame A:
qisifnikqnlnflniktnsnlnanyvnrnf*rsrcricisiqlk*lfrwi*rtrkeiry
*irsn**r*r*incr*pk*gwityn**gemansirfskmynh*snq**syg*lcfirikf
irlstscnd*nlwyhhfvtldr*ngssr*rmws*s*dgcfl*kefkstiqtslstlfil*
*sklsqqdfrwsslcyg*rqqgplefvyrrfqkesnppkn*tnl*gydarsr*ncyetif
qa*rcislgynrqqwycrpfarfnd**fpi*slwllnewssq*illdysyhtritl*lci
i*hqcssrrlqsivgkgfkcfqtrsfhsctlcrrwcsmwrslhcfrcqcpflcnsk*nct
wf*wwl*cccfklstig*kseffk**fnsinrin*y*fnsslknn*****liiiiynnin
nsynlvlei*liytnillsftfkiykkk


Frame B:
kfqflisnkt*if*tskqtqi*MPIMSTEIFNEADAGFVYQSNSNDYSDGFEGPEKKLDI
RFGPISKGSVKSIAGSPSKVGLRTIDKEKWQTVLDSARCTIISQTSNDHMDSYVLSESSL
FVYPRRAMIKTCGTTTLLHLIAKMVQVGKECGLEVEMVVFSRKNLNQPSKQVFPHCSFSD
EVNFLNKIFDGQAYVMGDVNKDHWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFF
KREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVS
FDTNVALADYNQLLAKVLNVFKPGRFTAALYAEDGAPCGDPYTAFDVNVPSYAIQNKTVH
GFDGGYDVVVSNYQQLDKKVNFSNDDLIQSIESTNIDLIQV*kiinnnnn****yiiisi
ihii*f*rys*yiqifyyhslskfikk


Frame C:
nfnf*yqtklkffkhqnklkfkcqlcqqkfltkqmqdlyinptqmiiqmdlkdqkrn*il
dsvqlvkvalnqlqvaqvrldyvqlirrngkqy*iqqdvqslvkpvmiiwiamfyqnqvy
sfihvvq*lkpvvpplcyt*slkwfk*vknvvlklrwlfsleri*inhpnksfhivhslm
k*tfstrfsmvkpmlwvtstrttgicispiseriqpskelnkplrl*ctismkll*nnfs
svkvyqlgiqpstvvlptfcqvq*lmisnlilvvtq*mvfsmnfiglfishqnhivamyh
ltpm*lsqitincwqrf*mfsnqvvsqlhsmpkmvlhveiltllsmsmslpmqfkiklym
vlmvvmmllfqiinnwikk*ifqmmi*fnqsnqlili*fkfkk*liiiiinnnni**yq*
fi*fsfrdivniykyfiiihfqnl*kk


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U03011-1 (Contig-U03011-1Q)
/CSM_Contig/Contig-U03011-1Q.Seq.d
(1344 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U03011-1 (Contig-U03011-1Q) /CSM_Contig/Conti... 2274 0.0
Contig-U10911-1 (Contig-U10911-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U03923-1 (Contig-U03923-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U10902-1 (Contig-U10902-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U10713-1 (Contig-U10713-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U08800-1 (Contig-U08800-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U02012-1 (Contig-U02012-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U13916-1 (Contig-U13916-1Q) /CSM_Contig/Conti... 34 0.38
Contig-U13872-1 (Contig-U13872-1Q) /CSM_Contig/Conti... 34 0.38
Contig-U12453-1 (Contig-U12453-1Q) /CSM_Contig/Conti... 34 0.38

>Contig-U03011-1 (Contig-U03011-1Q) /CSM_Contig/Contig-U03011-1Q.Seq.d
Length = 1344

Score = 2274 bits (1147), Expect = 0.0
Identities = 1147/1147 (100%)
Strand = Plus / Plus


Query: 63 tttaaatgccaattatgtcaacagaaatttttaacgaagcagatgcaggatttgtatatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tttaaatgccaattatgtcaacagaaatttttaacgaagcagatgcaggatttgtatatc 122


Query: 123 aatccaactcaaatgattattcagatggatttgaaggaccagaaaagaaattagatatta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aatccaactcaaatgattattcagatggatttgaaggaccagaaaagaaattagatatta 182


Query: 183 gattcggtccaattagtaaaggtagcgttaaatcaattgcaggtagcccaagtaaggttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gattcggtccaattagtaaaggtagcgttaaatcaattgcaggtagcccaagtaaggttg 242


Query: 243 gattacgtacaattgataaggagaaatggcaaacagtattagattcagcaagatgtacaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gattacgtacaattgataaggagaaatggcaaacagtattagattcagcaagatgtacaa 302


Query: 303 tcattagtcaaaccagtaatgatcatatggatagctatgttttatcagaatcaagtttat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tcattagtcaaaccagtaatgatcatatggatagctatgttttatcagaatcaagtttat 362


Query: 363 tcgtttatccacgtcgtgcaatgattaaaacctgtggtaccaccactttgttacacttga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcgtttatccacgtcgtgcaatgattaaaacctgtggtaccaccactttgttacacttga 422


Query: 423 tcgctaaaatggttcaagtaggtaaagaatgtggtcttgaagttgagatggttgttttct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tcgctaaaatggttcaagtaggtaaagaatgtggtcttgaagttgagatggttgttttct 482


Query: 483 ctagaaagaatttaaatcaaccatccaaacaagtctttccacattgttcattctctgatg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctagaaagaatttaaatcaaccatccaaacaagtctttccacattgttcattctctgatg 542


Query: 543 aagtaaactttctcaacaagattttcgatggtcaagcctatgttatgggtgacgtcaaca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagtaaactttctcaacaagattttcgatggtcaagcctatgttatgggtgacgtcaaca 602


Query: 603 aggaccactggaatttgtatatcgccgatttcagaaagaatccaaccctccaaagaactg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aggaccactggaatttgtatatcgccgatttcagaaagaatccaaccctccaaagaactg 662


Query: 663 aacaaacctttgaggttatgatgcacgatctcgatgaaactgttatgaaacaatttttca 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aacaaacctttgaggttatgatgcacgatctcgatgaaactgttatgaaacaatttttca 722


Query: 723 agcgtgaaggtgtatcagcttgggatacaaccgtcaacagtggtattgccgaccttttgc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 agcgtgaaggtgtatcagcttgggatacaaccgtcaacagtggtattgccgaccttttgc 782


Query: 783 caggttcaatgattgatgatttccaatttgatccttgtggttactcaatgaatggtcttc 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 caggttcaatgattgatgatttccaatttgatccttgtggttactcaatgaatggtcttc 842


Query: 843 tcaatgaattttattggactattcatatcacaccagaatcacattgtagctatgtatcat 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 tcaatgaattttattggactattcatatcacaccagaatcacattgtagctatgtatcat 902


Query: 903 ttgacaccaatgtagctctcgcagattacaatcaattgttggcaaaggttttaaatgttt 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ttgacaccaatgtagctctcgcagattacaatcaattgttggcaaaggttttaaatgttt 962


Query: 963 tcaaaccaggtcgtttcacagctgcactctatgccgaagatggtgctccatgtggagatc 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 tcaaaccaggtcgtttcacagctgcactctatgccgaagatggtgctccatgtggagatc 1022


Query: 1023 cttacactgctttcgatgtcaatgtcccttcctatgcaattcaaaataaaactgtacatg 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 cttacactgctttcgatgtcaatgtcccttcctatgcaattcaaaataaaactgtacatg 1082


Query: 1083 gttttgatggtggttatgatgttgttgtttcaaattatcaacaattggataaaaaagtga 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 gttttgatggtggttatgatgttgttgtttcaaattatcaacaattggataaaaaagtga 1142


Query: 1143 atttttcaaatgatgatttaattcaatcaatcgaatcaactaatattgatttaattcaag 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 atttttcaaatgatgatttaattcaatcaatcgaatcaactaatattgatttaattcaag 1202


Query: 1203 tttaaaa 1209
|||||||
Sbjct: 1203 tttaaaa 1209


Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1313 tatcattcactttcaaaatttat 1335
|||||||||||||||||||||||
Sbjct: 1313 tatcattcactttcaaaatttat 1335


>Contig-U10911-1 (Contig-U10911-1Q) /CSM_Contig/Contig-U10911-1Q.Seq.d
Length = 2463

Score = 38.2 bits (19), Expect = 0.024
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 124 atccaactcaaatgattat 142
|||||||||||||||||||
Sbjct: 588 atccaactcaaatgattat 606


>Contig-U03923-1 (Contig-U03923-1Q) /CSM_Contig/Contig-U03923-1Q.Seq.d
Length = 1770

Score = 38.2 bits (19), Expect = 0.024
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 1118 tatcaacaattggataaaa 1136
|||||||||||||||||||
Sbjct: 74 tatcaacaattggataaaa 56


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,052
Number of Sequences: 6905
Number of extensions: 13052
Number of successful extensions: 1445
Number of sequences better than 10.0: 147
length of query: 1344
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1328
effective length of database: 5,564,391
effective search space: 7389511248
effective search space used: 7389511248
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.24
Homology vs DNA
Query= Contig-U03011-1 (Contig-U03011-1Q) /CSM_Contig/Contig-U03011-1Q.Seq.d
(1344 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116960) Dictyostelium discoideum chromosome 2 map complem... 2153 0.0 1
(AU061558) Dictyostelium discoideum slug cDNA, clone SLE633. 1221 0.0 1
(BJ328800) Dictyostelium discoideum cDNA clone:dda29e13, 5' ... 1063 0.0 1
(BJ345930) Dictyostelium discoideum cDNA clone:dda29e13, 3' ... 963 0.0 1
(AU268086) Dictyostelium discoideum vegetative cDNA clone:VS... 383 e-105 2
(AU268087) Dictyostelium discoideum vegetative cDNA clone:VS... 315 2e-81 1
(BC061532) Rattus norvegicus S-adenosylmethionine decarboxyl... 42 6e-05 2
(M34464) Rat S-adenosylmethionine decarboxylase mRNA, comple... 42 6e-05 2
(GC671622) Sequence 2214 from patent US 7447594. 42 6e-05 2
(DJ007588) Primary rat hepatocyte toxicity modeling. 42 6e-05 2
(DD317020) Primary Rat Hepatocyte Toxicity Modeling. 42 6e-05 2
(DD270170) Molecular Hepatotoxicology Modeling. 42 6e-05 2
(GP049081) Sequence 3710 from patent US 7469185. 42 6e-05 2
(AY724509) Rattus norvegicus clone UI-R-FJ0-cpx-l-10-0-UI un... 42 6e-05 2
(EV773103) AGENCOURT_112365066 NIH_MGC_429 Rattus norvegicus... 42 6e-05 2
(CO556803) AGENCOURT_28542813 NIH_MGC_248 Rattus norvegicus ... 42 6e-05 2
(CV107119) AGENCOURT_31527990 NIH_MGC_238 Rattus norvegicus ... 42 6e-05 2
(EV773864) AGENCOURT_112359365 NIH_MGC_429 Rattus norvegicus... 42 6e-05 2
(CV126778) AGENCOURT_31913917 NIH_MGC_238 Rattus norvegicus ... 42 6e-05 2
(CK839427) UI-R-BJ1-aua-b-12-0-UI.s10 UI-R-BJ1 Rattus norveg... 42 6e-05 2
(CO560979) AGENCOURT_28455986 NIH_MGC_247 Rattus norvegicus ... 42 6e-05 2
(FM123317) Rattus norvegicus EST, 5'-end sequence, clone etn... 42 6e-05 2
(BQ780903) UI-R-FF0-coz-c-23-0-UI.s1 NCI_CGAP_FF0 Rattus nor... 42 6e-05 2
(FG516254) 030604KAZB004451HT (KAZB) Actinidia chinensis you... 44 6e-05 2
(BQ193071) UI-R-DY0-cmi-f-02-0-UI.s1 NCI_CGAP_DY0 Rattus nor... 42 6e-05 2
(CN716850) E0733E03-5 NIA Mouse four-cell-Embryo cDNA librar... 42 6e-05 2
(CN717752) E0751G10-5 NIA Mouse four-cell-Embryo cDNA librar... 42 6e-05 2
(AI237603) EST234165 Normalized rat placenta, Bento Soares R... 42 6e-05 2
(BE126886) DEPA0634 Rat Lambda ZAP Express Library Rattus no... 42 6e-05 2
(CA334072) NISC_ls05c04.y1 NCI_CGAP_Pr50 Rattus norvegicus c... 42 6e-05 2
(FM029547) Rattus norvegicus EST, 5'-end sequence, clone etc... 42 6e-05 2
(BE101198) UI-R-BJ1-aua-b-12-0-UI.s1 UI-R-BJ1 Rattus norvegi... 42 6e-05 2
(CB742397) AMGNNUC:NRPI3-00072-D6-A W Rat pituitary (10477) ... 42 6e-05 2
(BP477457) Rattus norvegicus mRNA, clone:RBC14765, 3' end, e... 42 6e-05 2
(FM115996) Rattus norvegicus EST, 5'-end sequence, clone etn... 42 6e-05 2
(CB802248) AMGNNUC:SRPB2-00220-C11-A srpb2 (10220) Rattus no... 42 6e-05 2
(CA512146) UI-R-FJ0-cpx-l-10-0-UI.r1 UI-R-FJ0 Rattus norvegi... 40 2e-04 2
(FG522095) 030702KAZB017422HT (KAZB) Actinidia chinensis you... 44 2e-04 2
(CB720822) AMGNNUC:NRHY4-00121-B3-A W Rat hypothalamus (1046... 42 2e-04 2
(DY523056) Pr_hyd_03F10_XL_TOPO_SEQ Philodina roseola hydrat... 60 2e-04 1
(DR947872) EST1139411 Aquilegia cDNA library Aquilegia formo... 60 2e-04 1
(DR947871) EST1139410 Aquilegia cDNA library Aquilegia formo... 60 2e-04 1
(DR914745) EST1106284 Aquilegia cDNA library Aquilegia formo... 60 2e-04 1
(ES560057) est_e_glacialis2335 RightWhaleSkin Eubalaena glac... 42 9e-04 2
(AC173267) Bos taurus clone CH240-226J14, WORKING DRAFT SEQU... 40 0.003 2
(BC123795) Bos taurus adenosylmethionine decarboxylase 1, mR... 40 0.003 2
(AB170433) Macaca fascicularis brain cDNA clone: QmoA-10874,... 40 0.003 2
(M95605) Bos taurus S-adenosylmethionine decarboxylase (AdoM... 40 0.003 2
(CO645928) ILLUMIGEN_MCQ_37015 Katze_MMBR Macaca mulatta cDN... 40 0.003 2
(EC339500) KIDNEYF089524A22 POSSUM_01-POSSUM-KIDNEY-2KB Tric... 40 0.003 2
(CO888478) BovGen_16803 normal cattle brain Bos taurus cDNA ... 40 0.003 2
(CJ463291) Macaca fascicularis mRNA, clone: QnpA-11471, 5' e... 40 0.003 2
(CF763479) CES005686 Bos taurus skin cDNA library Bos taurus... 40 0.003 2
(BQ807702) NISC_kk09b08.y1 NCI_CGAP_Brn72 Macaca mulatta cDN... 40 0.003 2
(EB172548) EST007447 injuried spinal cord cDNA library in Ge... 40 0.003 2
(DY150267) 991121BOVA999084HT BOVA Bos taurus cDNA 5', mRNA ... 40 0.003 2
(DN504743) HL01013A1F08 Equine lymphocyte cDNA Library Equus... 40 0.003 2
(M14289) Bovine S-Adenosylmethionine (AdoMet) decarboxylase ... 40 0.003 2
(DR914746) EST1106285 Aquilegia cDNA library Aquilegia formo... 56 0.004 1
(AC166287) Medicago truncatula clone mth2-71m16, complete se... 44 0.006 5
(AC096337) Rattus norvegicus clone CH230-95F24, *** SEQUENCI... 38 0.010 2
(AC129995) Rattus norvegicus clone CH230-422L10, *** SEQUENC... 38 0.010 2
(U40719) Rattus norvegicus S-adenosylmethionine decarboxylas... 38 0.011 2
(X63861) M.auratus mRNA for S-adenosylmethionine decarboxylase. 38 0.012 2
(CS394070) Sequence 3345 from Patent WO2006025879. 38 0.012 2
(CS214026) Sequence 3345 from Patent WO2005111246. 38 0.012 2
(CB165400) NBL602699891.R1 CSEQFXL18 hypothalamus Bos taurus... 40 0.012 2
(CS397712) Sequence 6987 from Patent WO2006025879. 38 0.012 2
(CS217668) Sequence 6987 from Patent WO2005111246. 38 0.012 2
(BF559070) UI-R-E0-cd-c-07-0-UI.r1 UI-R-E0 Rattus norvegicus... 38 0.012 2
(BI817657) G2-N3 Axolotl Lambda Zap Library Ambystoma mexica... 40 0.012 2
(FE148528) LV_LO_RA003L20r Litopenaeus vannamei lymphoid org... 54 0.014 1
(Z15123) R.norvegicus S-adenosylmethionine decarboxylase gen... 42 0.036 2
(BC042281) Xenopus laevis S-Adenosylmethionine decarboxylase... 38 0.043 2
(S82621) S-adenosylmethionine decarboxylase [Xenopus laevis=... 38 0.045 2
(BQ731222) AGENCOURT_8226805 NICHD_XGC_Emb4 Xenopus laevis c... 38 0.045 2
(CF282952) AGENCOURT_15208069 NICHD_XGC_Sp1 Xenopus laevis c... 38 0.046 2
(BJ066665) Xenopus laevis cDNA clone:XL086n12, 5' end, singl... 38 0.046 2
(BJ061482) Xenopus laevis cDNA clone:XL073b16, 5' end, singl... 38 0.046 2
(FK079156) XABT135525.g1 Gateway compatible cien cDNA librar... 52 0.057 1
(ET839812) CHO_OF440xf17f1.ab1 CHO_OF Nicotiana tabacum geno... 50 0.067 2
(FH958343) CHO_OF6768xn03f1.ab1 CHO_OF6 Nicotiana tabacum ge... 50 0.071 2
(FH861997) OSB_181005xc11f1.ab1 OSB_181 Nicotiana tabacum ge... 48 0.074 2
(FH861973) OSB_181004xn08f1.ab1 OSB_181 Nicotiana tabacum ge... 48 0.076 2
(M64274) Rat AdoMetDC gene, complete CDS. 42 0.091 2
(BI506273) BB170018A20C08.5 Bee Brain Normalized/Subtracted ... 36 0.17 2
(BQ784289) SnEST4a86b06.y1 cSn 1 3 S neurona subtracted cDNA... 40 0.18 2
(FH351828) CHO_OF4663xj07f1.ab1 CHO_OF4 Nicotiana tabacum ge... 50 0.22 1
(FH323254) CHO_OF4261xn06f1.ab1 CHO_OF4 Nicotiana tabacum ge... 50 0.22 1
(FH170845) CHO_OF3385xn20f1.ab1 CHO_OF3 Nicotiana tabacum ge... 50 0.22 1
(ET755350) CHO_OF207xe24f1.ab1 CHO_OF Nicotiana tabacum geno... 50 0.22 1
(ET730712) CHO_OF152xc18f1.ab1 CHO_OF Nicotiana tabacum geno... 50 0.22 1
(EC822947) SME00001215 esmbsro2 Sawyeria marylandensis cDNA,... 50 0.22 1
(EC820218) SME00005132 esmbsro2 Sawyeria marylandensis cDNA,... 50 0.22 1
(FK115903) XABT159353.g1 Gateway compatible cien cDNA librar... 50 0.22 1
(FH255404) CHO_OF3009xk23r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 0.28 2
(AJ851416) Gallus gallus mRNA for hypothetical protein, clon... 34 0.60 2
(BX950282) Gallus gallus finished cDNA, clone ChEST332o22. 34 0.62 2
(DR413746) gPGC_EST03588 Embryonic gonadal PGC cDNA Library ... 34 0.62 2
(BU110413) 603127913F1 CSEQCHL13 Gallus gallus cDNA clone Ch... 34 0.63 2
(BU248064) 603591541F1 CSEQCHN34 Gallus gallus cDNA clone Ch... 34 0.64 2
(AJ725775) Gallus gallus EST, clone 2e16r3. 34 0.64 2
(BF723937) EST00835 DT40subNB Gallus gallus cDNA clone 16D9,... 34 0.64 2
(CV853607) gonad_EST01083 Embryonic gonad cDNA Library Gallu... 34 0.64 2
(AJ725785) Gallus gallus EST, clone 2e16s5. 34 0.64 2
(BU336207) 603498596F1 CSEQCHN65 Gallus gallus cDNA clone Ch... 34 0.64 2
(CN221377) RJA075G01.ab1 RJbrain Gallus gallus cDNA 5', mRNA... 34 0.64 2
(FH170916) CHO_OF3385xn20r1.ab1 CHO_OF3 Nicotiana tabacum ge... 42 0.72 3
(AL807393) Mouse DNA sequence from clone RP23-142A9 on chrom... 34 0.77 5
(AM425654) Vitis vinifera contig VV78X003292.4, whole genome... 48 0.89 1
(AL353790) Human DNA sequence from clone RP11-337N19 on chro... 48 0.89 1
(AC180482) Strongylocentrotus purpuratus clone R3-3100O20, W... 48 0.89 1
(AY496095) Capsicum annuum S-adenosylmethionine decarboxylas... 48 0.89 1
(FH862231) OSB_181005xl12f1.ab1 OSB_181 Nicotiana tabacum ge... 48 0.89 1
(FH861798) OSB_181004xe18f1.ab1 OSB_181 Nicotiana tabacum ge... 48 0.89 1
(FH861564) OSB_181003xo04f1.ab1 OSB_181 Nicotiana tabacum ge... 48 0.89 1
(FH861203) OSB_181006xc17f1.ab1 OSB_181 Nicotiana tabacum ge... 48 0.89 1
(FH028941) CHO_OF3170xk01r1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.89 1
(EE108712) SCB07486 Inflorescence with GA3 (VvS12) Vitis vin... 48 0.89 1
(EE108004) SCB02230 Inflorescence with GA3 (VvS12) Vitis vin... 48 0.89 1
(EE105220) SBB07727 Inflorescence (VvS11) Vitis vinifera cDN... 48 0.89 1
(EE104008) SBB05447 Inflorescence (VvS11) Vitis vinifera cDN... 48 0.89 1
(EE103765) SBB04738 Inflorescence (VvS11) Vitis vinifera cDN... 48 0.89 1
(EE103016) SBB02191 Inflorescence (VvS11) Vitis vinifera cDN... 48 0.89 1
(EE102622) SBB01894 Inflorescence (VvS11) Vitis vinifera cDN... 48 0.89 1
(EE095721) S8B02824 Fruits Veraison (VvS8) Vitis vinifera cD... 48 0.89 1
(EE092918) S7B04504 Berries 14mm with GA3 (VvS7) Vitis vinif... 48 0.89 1
(EE091282) S7B06911 Berries 14mm with GA3 (VvS7) Vitis vinif... 48 0.89 1
(EE081831) S4B02365 Fruits 2-3 mm (VvS4) Vitis vinifera cDNA... 48 0.89 1
(EE079640) S2B21778 Buds (VvS2) Vitis vinifera cDNA clone S2... 48 0.89 1
(EE076569) S1G02409 Fruits and flowers treated with GA3 (VvS... 48 0.89 1
(EC993009) WIN1147.C21_B23 Muscat Hamburg pre-veraison berry... 48 0.89 1
(EC984609) WIN1122.C21_G17 Muscat Hamburg pre-veraison berry... 48 0.89 1
(EC974458) WIN1019.C21_B06 Muscat Hamburg post-veraison peri... 48 0.89 1
(EC965042) WIN089.C21_P14 Cab Sauv seed normalized (WIN08) V... 48 0.89 1
(EC939114) WIN058.C21_K04 Cab Sauv flower, leaf and root nor... 48 0.89 1
(EC937463) WIN0515.C21_J05 Cab Sauv flower, leaf and root no... 48 0.89 1
(EB690710) NecGex_156D05 Ornamental tobacco (LxS8) Stage 6 F... 48 0.89 1
(EB431215) KL5B.112H12F.060215T7 KL5B Nicotiana tabacum cDNA... 48 0.89 1
(CX017008) EST 717 'Fleshless' Ugni blanc SSH Library Vitis ... 48 0.89 1
(CV098808) FAMU_USDA_FP_6831 Vitis shuttleworthii L., grape ... 48 0.89 1
(CV098573) FAMU_USDA_FP_6596 Vitis shuttleworthii L., grape ... 48 0.89 1
(CV094806) FAMU_USDA_FP_2829 Vitis shuttleworthii L., grape ... 48 0.89 1
(CO819307) CSECS127F01_PREn0028 CabSau Normalised Berry Frui... 48 0.89 1
(AJ805876) Antirrhinum majus EST, clone 018_6_02_f03. 48 0.89 1
(AJ803707) Antirrhinum majus EST, clone 018_5_07_n12. 48 0.89 1
(AJ802044) Antirrhinum majus EST, clone 018_5_02_p17. 48 0.89 1
(AJ793940) Antirrhinum majus EST, clone 018_3_03_n17. 48 0.89 1
(AJ791460) Antirrhinum majus EST, clone 018_2_08_m20. 48 0.89 1
(CF210497) CAB20006_IIa_Ra_G04 Cabernet Sauvignon Flower blo... 48 0.89 1
(CF210265) CAB20006_IIIa_Fa_H11 Cabernet Sauvignon Flower bl... 48 0.89 1
(CF208985) CAB20004_IIIb_Rb_B12 Cabernet Sauvignon Flower bl... 48 0.89 1
(CF208910) CAB20004_IIIa_Fa_B12 Cabernet Sauvignon Flower bl... 48 0.89 1
(CF208554) CAB20003_IVa_Fa_B07 Cabernet Sauvignon Flower blo... 48 0.89 1
(CF206160) RR890915I0006_IIIa_Ra_H11 Vitis sp. RR890915I Vit... 48 0.89 1
(CF202154) RR890915N0004_Ia_Ra_E12 Vitis sp. RR890915N Vitis... 48 0.89 1
(CB982889) CAB70007_IIaR_F04 Cabernet Sauvignon Berry Post-V... 48 0.89 1
(CB982834) CAB70007_IIaF_F04 Cabernet Sauvignon Berry Post-V... 48 0.89 1
(CB918848) VVD038D04_348329 An expressed sequence tag databa... 48 0.89 1
(CB341247) CA32EN0001_IIIbR_A08 Cabernet Sauvignon Leaf - CA... 48 0.89 1
(CB341192) CA32EN0001_IIIaF_A08 Cabernet Sauvignon Leaf - CA... 48 0.89 1
(BQ798995) EST 1164 Green Grape berries Lambda Zap II Librar... 48 0.89 1
(BQ798994) EST 1163 Green Grape berries Lambda Zap II Librar... 48 0.89 1
(BQ798260) EST 429 Green Grape berries Lambda Zap II Library... 48 0.89 1
(BM060946) KS01022D10 KS01 Capsicum annuum cDNA, mRNA sequence. 48 0.89 1
(FG635807) TT-07_F16 Samsun trichome library Nicotiana tabac... 48 0.89 1
(FG518800) 030629KAZB014855HT (KAZB) Actinidia chinensis you... 48 0.89 1
(FG492594) 030610KAWC012612HT (KAWC) Actinidia chinensis - a... 48 0.89 1
(FG491547) 030213KAWC005109HT (KAWC) Actinidia chinensis - a... 48 0.89 1
(FG185170) AGN_PNL209ar1_c6.trimmed.seq AGN_PNL Nicotiana ta... 48 0.89 1
(FG183701) AGN_PNL207ar1_c4.trimmed.seq AGN_PNL Nicotiana ta... 48 0.89 1
(EV241456) VV_PEd0017h09.b1 Vitis vinifera cv. perlette LibD... 48 0.89 1
(EV230638) VV_PEa13a11.g1 Vitis vinifera cv. perlette LibA V... 48 0.89 1
(AC162030) Medicago truncatula clone mth2-178b21, complete s... 44 1.7 4
(FH964414) CHO_OF6779xh11r1.ab1 CHO_OF6 Nicotiana tabacum ge... 36 2.4 2
(FH555807) CHO_OF4498xn08f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 2.6 2
(AC149951) Strongylocentrotus purpuratus clone R3-32B19, WOR... 40 2.6 4
(AC159715) Mus musculus 6 BAC RP23-367A13 (Roswell Park Canc... 46 3.5 1
(AC158672) Mus musculus 6 BAC RP23-64J23 (Roswell Park Cance... 46 3.5 1
(AC155332) Mus musculus 6 BAC RP24-140J8 (Roswell Park Cance... 46 3.5 1
(AC102519) Mus musculus chromosome 18, clone RP24-560I9, com... 46 3.5 1
(BT050792) Medicago truncatula clone MTYF5_F6_F7_F81G-J-9 un... 46 3.5 1
(AP010345) Lotus japonicus genomic DNA, chromosome 2, clone:... 46 3.5 1
(AP006372) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 3.5 1
(AJ704800) Prunus persica partial samdc gene for S-adenosylm... 46 3.5 1
(AB194104) Prunus persica pPpSAMDC mRNA for S-adenosylmethio... 46 3.5 1
(AY657027) Mus musculus chromosome 6 clone GA_x54KRFPKN04:12... 46 3.5 1
(AC231572) Choloepus hoffmanni clone CH281-68N6, WORKING DRA... 46 3.5 1
(AZ236310) RPCI-23-98B1.TV RPCI-23 Mus musculus genomic clon... 46 3.5 1
(FH255333) CHO_OF3009xk23f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 3.5 1
(ED972671) OA_CBa0191P08.f OA_CBa Oryza australiensis genomi... 46 3.5 1
(AG607095) Mus musculus molossinus DNA, clone:MSMg01-540P12.... 46 3.5 1
(CE237999) tigr-gss-dog-17000333404211 Dog Library Canis lup... 46 3.5 1
(AG470429) Mus musculus molossinus DNA, clone:MSMg01-361I08.... 46 3.5 1
(AG252356) Lotus japonicus DNA, clone:LjT31m20_not. 46 3.5 1
(AV423326) Lotus japonicus cDNA clone:MWM025b08_r, 5' end. 46 3.5 1
(AV416510) Lotus japonicus cDNA clone:MWM127b08_r, 5' end. 46 3.5 1
(AV411956) Lotus japonicus cDNA clone:MWM213d01_r, 5' end. 46 3.5 1
(DW359162) PU2_plate51_D23 PU2 Prunus persica cDNA clone PU2... 46 3.5 1
(DW357822) PU2_plate36_N15 PU2 Prunus persica cDNA clone PU2... 46 3.5 1
(DW356986) PU2_plate23_E19 PU2 Prunus persica cDNA clone PU2... 46 3.5 1
(DW354598) PU2_plate15_D10 PU2 Prunus persica cDNA clone PU2... 46 3.5 1
(DW351221) PU1_plate39_K10 PU1 Prunus persica cDNA clone PU1... 46 3.5 1
(DW350908) PU1_plate32_G16 PU1 Prunus persica cDNA clone PU1... 46 3.5 1
(DW348578) PU1_plate2_H11 PU1 Prunus persica cDNA clone PU1_... 46 3.5 1
(DN677119) PP_YEa0022E05 Peach developing fruit mesocarp Sta... 46 3.5 1
(DN677041) PP_YEa0020H09 Peach developing fruit mesocarp Sta... 46 3.5 1
(DN676982) PP_YEa0019G06 Peach developing fruit mesocarp Sta... 46 3.5 1
(AU089388) Lotus japonicus cDNA: Ljfb-r52, 5' end, expressed... 46 3.5 1
(AU089046) Lotus japonicus cDNA: Ljfb-j12, 5' end, expressed... 46 3.5 1
(CX642986) UCRPT02_64C07_b Poncirus trifoliata Roots with Ir... 46 3.5 1
(CX640622) UCRPT02_48E08_g Poncirus trifoliata Roots with Ir... 46 3.5 1
(CX638797) UCRPT02_37C07_g Poncirus trifoliata Roots with Ir... 46 3.5 1
(CX638796) UCRPT02_37C07_b Poncirus trifoliata Roots with Ir... 46 3.5 1
(CX545713) UCRPT01_5_024_E12_T7 Poncirus trifoliata CTV-chal... 46 3.5 1
(CX544394) UCRPT01_5_013_C01_T7 Poncirus trifoliata CTV-chal... 46 3.5 1
(CX543851) UCRPT01_5_009_F02_T7 Poncirus trifoliata CTV-chal... 46 3.5 1
(CX543830) UCRPT01_5_009_D10_T7 Poncirus trifoliata CTV-chal... 46 3.5 1
(CV711069) UCRPT01_0015F09_f Poncirus trifoliata CTV-challen... 46 3.5 1
(CV709804) UCRPT01_0013G23_f Poncirus trifoliata CTV-challen... 46 3.5 1
(CV707331) UCRPT01_0009K17_r Poncirus trifoliata CTV-challen... 46 3.5 1
(CV706252) UCRPT01_0008B06_f Poncirus trifoliata CTV-challen... 46 3.5 1
(CV705937) UCRPT01_0007J20_f Poncirus trifoliata CTV-challen... 46 3.5 1
(CV704246) UCRPT01_0005B23_f Poncirus trifoliata CTV-challen... 46 3.5 1
(CV052251) EST 11699 Half-Ripe Apricot Fruit Lambda Zap II L... 46 3.5 1
(CU684923) summer mortality gills (fw+rv) Crassostrea gigas ... 46 3.5 1
(AM288767) Prunus persica EST, clone Skin47H04. 46 3.5 1
(CN825167) LjPEST3f12 Lotus japonicus seed and seed pod libr... 46 3.5 1
(AJ824817) Prunus persica EST, clone S38D2. 46 3.5 1
(CF420665) USDA-FP_118000-667 Immature Ovaries from field co... 46 3.5 1
(CF419424) USDA-FP_117000-365 Immature Ovaries from field co... 46 3.5 1
(CD575549) UCRPT01_04cd06_b1 Poncirus trifoliata CTV-challen... 46 3.5 1
(CD575537) UCRPT01_04cb09_b1 Poncirus trifoliata CTV-challen... 46 3.5 1
(CD574029) UCRPT01_03_F09_T7 Poncirus trifoliata CTV-challen... 46 3.5 1
(CB821118) EST 1969 Half-Ripe Apricot Fruit Lambda Zap II Li... 46 3.5 1
(CB087231) hj97f12.g1 Hedyotis centranthoides flower - Stage... 46 3.5 1
(BU574186) PA__Ea0006I11f Almond developing seed Prunus dulc... 46 3.5 1
(BU048825) PP_LEa0037D23f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU046723) PP_LEa0027G01f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU044181) PP_LEa0018H04f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU043711) PP_LEa0016P05f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU043539) PP_LEa0016G01f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU041754) PP_LEa0010G03f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU040761) PP_LEa0007D09f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU039886) PP_LEa0004C21f Peach developing fruit mesocarp Pr... 46 3.5 1
(BU039464) PP_LEa0002M14f Peach developing fruit mesocarp Pr... 46 3.5 1
(BP077696) Lotus japonicus cDNA, clone:MR022f10_f, 3' end. 46 3.5 1
(BP047554) Lotus japonicus cDNA, clone:SPD045a03_f, 3' end. 46 3.5 1
(BP029168) Lotus japonicus cDNA, clone:MF017h03_f, 3' end. 46 3.5 1
(GO016284) LJGB028TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA ... 46 3.5 1
(GO014686) LJGAG91TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA ... 46 3.5 1
(GO005802) LJGAG91TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA ... 46 3.5 1
(FE969323) EST149 Subtraction suppressive hybridization libr... 46 3.5 1
(AW720518) LjNEST18e4r Lotus japonicus nodule library 5 and ... 46 3.5 1
(EY840169) PT11-C9-005-024-C11-CT.F Poncirus trifoliata seed... 46 3.5 1
(EY839883) PT11-C9-005-019-E07-CT.F Poncirus trifoliata seed... 46 3.5 1
(EY834044) PT11-C2-301-024-E07-CT.F Poncirus trifoliata bark... 46 3.5 1
(EY831813) PT11-C2-300-067-F06-CT.F Poncirus trifoliata bark... 46 3.5 1
(EY827081) PT11-C1-901-092-G01-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY825651) PT11-C1-901-078-G05-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY820054) PT11-C1-901-016-H08-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY818662) PT11-C1-900-100-E11-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY817637) PT11-C1-900-087-F06-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY817066) PT11-C1-900-081-D01-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY816507) PT11-C1-900-078-B05-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY816296) PT11-C1-900-068-F07-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY815202) PT11-C1-900-061-C07-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY810894) PT11-C1-900-012-E06-CT.F Poncirus trifoliata leaf... 46 3.5 1
(EY810040) PT11-C1-900-003-B02-CT.F Poncirus trifoliata leaf... 46 3.5 1
(FH630497) CHO_OF4556xb12f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 3.8 2
(AC133228) Rattus norvegicus clone CH230-218A17, WORKING DRA... 42 4.6 5
(AC135479) Rattus norvegicus clone CH230-217M5, *** SEQUENCI... 42 4.6 5
(AC169126) Medicago truncatula chromosome 2 BAC clone mth2-7... 44 6.2 4
(AC127129) Rattus norvegicus clone CH230-229H22, WORKING DRA... 42 6.5 3
(BC135371) Xenopus tropicalis cDNA clone IMAGE:7615867, cont... 32 8.2 2
(BC161042) Xenopus tropicalis adenosylmethionine decarboxyla... 32 8.3 2
(CR760978) Xenopus tropicalis finished cDNA, clone TEgg032m17. 32 8.4 2
(DT425082) JGI_CABJ5226.fwd NIH_XGC_tropSki1 Xenopus (Silura... 32 8.7 2
(BX744775) Xenopus tropicalis EST, clone TTpA059i08 5'. 32 8.7 2
(DT415959) JGI_CABI13290.rev NIH_XGC_tropOvi1 Xenopus (Silur... 32 8.7 2
(CX325300) JGI_XZT14111.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 8.7 2
(BX736724) Xenopus tropicalis EST, clone TTpA069i12 5'. 32 8.7 2
(DN013556) JGI_CAAQ10948.fwd NIH_XGC_tropHrt1 Xenopus (Silur... 32 8.7 2
(CX924522) JGI_CAAN9950.fwd NIH_XGC_tropTe4 Xenopus (Siluran... 32 8.7 2
(DN062462) JGI_CABD735.fwd NIH_XGC_tropLun1 Xenopus (Siluran... 32 8.8 2
(CR439280) Xenopus tropicalis EST, clone TTbA039g08 5'. 32 8.8 2
(DN096725) JGI_CABE7027.fwd NIH_XGC_tropOva1 Xenopus (Silura... 32 8.8 2
(DN001108) JGI_CAAQ3330.fwd NIH_XGC_tropHrt1 Xenopus (Silura... 32 8.8 2
(CX411658) JGI_XZT28503.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 8.8 2
(DT387484) JGI_CABH6649.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 32 8.8 2
(DR850352) JGI_CABE12962.fwd NIH_XGC_tropOva1 Xenopus (Silur... 32 8.8 2
(DN014566) JGI_CAAQ11534.rev NIH_XGC_tropHrt1 Xenopus (Silur... 32 8.8 2
(CX999955) JGI_CAAQ2673.fwd NIH_XGC_tropHrt1 Xenopus (Silura... 32 8.8 2
(CX381636) JGI_XZT53183.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 8.8 2
(CR582558) Xenopus tropicalis EST, clone THdA053c01 5'. 32 8.8 2
(DN000272) JGI_CAAQ2851.rev NIH_XGC_tropHrt1 Xenopus (Silura... 32 8.8 2
(DN004828) JGI_CAAQ5461.fwd NIH_XGC_tropHrt1 Xenopus (Silura... 32 8.8 2
(CX343593) JGI_XZT22965.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 8.8 2
(CX312340) JGI_XZT11882.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 8.8 2
(CX439797) JGI_XZG7899.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 32 8.8 2
(CX314667) JGI_XZT10007.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 8.8 2
(EL717066) CBSS1563.rev NICHD_XGC_tropSp1 Xenopus (Silurana)... 32 8.8 2
(CX312552) JGI_XZT8622.fwd NIH_XGC_tropTad5 Xenopus (Siluran... 32 8.8 2
(AL652543) Xenopus tropicalis EST, clone TGas028l02 5'. 32 8.8 2
(AL861167) Xenopus tropicalis EST, clone TEgg069l01 5'. 32 8.9 2
(AC225525) Medicago truncatula clone mth2-143e6, WORKING DRA... 44 9.8 3
(EG409272) SAAH-aaa30h11.b1 Agen 0058 Schmidtea mediterranea... 38 9.9 2

>(AC116960) Dictyostelium discoideum chromosome 2 map
complement(1004496-821614) strain AX4, complete sequence.
Length = 182870

Score = 2153 bits (1086), Expect = 0.0
Identities = 1086/1086 (100%)
Strand = Plus / Plus


Query: 79 gtcaacagaaatttttaacgaagcagatgcaggatttgtatatcaatccaactcaaatga 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14487 gtcaacagaaatttttaacgaagcagatgcaggatttgtatatcaatccaactcaaatga 14546


Query: 139 ttattcagatggatttgaaggaccagaaaagaaattagatattagattcggtccaattag 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14547 ttattcagatggatttgaaggaccagaaaagaaattagatattagattcggtccaattag 14606


Query: 199 taaaggtagcgttaaatcaattgcaggtagcccaagtaaggttggattacgtacaattga 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14607 taaaggtagcgttaaatcaattgcaggtagcccaagtaaggttggattacgtacaattga 14666


Query: 259 taaggagaaatggcaaacagtattagattcagcaagatgtacaatcattagtcaaaccag 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14667 taaggagaaatggcaaacagtattagattcagcaagatgtacaatcattagtcaaaccag 14726


Query: 319 taatgatcatatggatagctatgttttatcagaatcaagtttattcgtttatccacgtcg 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14727 taatgatcatatggatagctatgttttatcagaatcaagtttattcgtttatccacgtcg 14786


Query: 379 tgcaatgattaaaacctgtggtaccaccactttgttacacttgatcgctaaaatggttca 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14787 tgcaatgattaaaacctgtggtaccaccactttgttacacttgatcgctaaaatggttca 14846


Query: 439 agtaggtaaagaatgtggtcttgaagttgagatggttgttttctctagaaagaatttaaa 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14847 agtaggtaaagaatgtggtcttgaagttgagatggttgttttctctagaaagaatttaaa 14906


Query: 499 tcaaccatccaaacaagtctttccacattgttcattctctgatgaagtaaactttctcaa 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14907 tcaaccatccaaacaagtctttccacattgttcattctctgatgaagtaaactttctcaa 14966


Query: 559 caagattttcgatggtcaagcctatgttatgggtgacgtcaacaaggaccactggaattt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14967 caagattttcgatggtcaagcctatgttatgggtgacgtcaacaaggaccactggaattt 15026


Query: 619 gtatatcgccgatttcagaaagaatccaaccctccaaagaactgaacaaacctttgaggt 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15027 gtatatcgccgatttcagaaagaatccaaccctccaaagaactgaacaaacctttgaggt 15086


Query: 679 tatgatgcacgatctcgatgaaactgttatgaaacaatttttcaagcgtgaaggtgtatc 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15087 tatgatgcacgatctcgatgaaactgttatgaaacaatttttcaagcgtgaaggtgtatc 15146


Query: 739 agcttgggatacaaccgtcaacagtggtattgccgaccttttgccaggttcaatgattga 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15147 agcttgggatacaaccgtcaacagtggtattgccgaccttttgccaggttcaatgattga 15206


Query: 799 tgatttccaatttgatccttgtggttactcaatgaatggtcttctcaatgaattttattg 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15207 tgatttccaatttgatccttgtggttactcaatgaatggtcttctcaatgaattttattg 15266


Query: 859 gactattcatatcacaccagaatcacattgtagctatgtatcatttgacaccaatgtagc 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15267 gactattcatatcacaccagaatcacattgtagctatgtatcatttgacaccaatgtagc 15326


Query: 919 tctcgcagattacaatcaattgttggcaaaggttttaaatgttttcaaaccaggtcgttt 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15327 tctcgcagattacaatcaattgttggcaaaggttttaaatgttttcaaaccaggtcgttt 15386


Query: 979 cacagctgcactctatgccgaagatggtgctccatgtggagatccttacactgctttcga 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15387 cacagctgcactctatgccgaagatggtgctccatgtggagatccttacactgctttcga 15446


Query: 1039 tgtcaatgtcccttcctatgcaattcaaaataaaactgtacatggttttgatggtggtta 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15447 tgtcaatgtcccttcctatgcaattcaaaataaaactgtacatggttttgatggtggtta 15506


Query: 1099 tgatgttgttgtttcaaattatcaacaattggataaaaaagtgaatttttcaaatgatga 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15507 tgatgttgttgtttcaaattatcaacaattggataaaaaagtgaatttttcaaatgatga 15566


Query: 1159 tttaat 1164
||||||
Sbjct: 15567 tttaat 15572

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,324,252,941
Number of extensions: 74185719
Number of successful extensions: 5699129
Number of sequences better than 10.0: 307
Length of query: 1344
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1320
Effective length of database: 99,340,224,878
Effective search space: 131129096838960
Effective search space used: 131129096838960
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.21
Homology vs Protein
Query= Contig-U03011-1 (Contig-U03011-1Q) /CSM_Contig/Contig-U03011-1Q.Seq.d
(1344 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q8T1E3) RecName: Full=S-adenosylmethionine decarboxylase proenz... 774 0.0
AB170433_1(AB170433|pid:none) Macaca fascicularis brain cDNA clo... 258 3e-67
(P31154) RecName: Full=S-adenosylmethionine decarboxylase proenz... 257 6e-67
(P17707) RecName: Full=S-adenosylmethionine decarboxylase proenz... 257 8e-67
(P82184) RecName: Full=S-adenosylmethionine decarboxylase proenz... 257 8e-67
(P50243) RecName: Full=S-adenosylmethionine decarboxylase proenz... 257 8e-67
BT058814_1(BT058814|pid:none) Salmo salar clone ssal-rgf-504-333... 255 3e-66
(P17708) RecName: Full=S-adenosylmethionine decarboxylase proenz... 255 3e-66
DCRTDM(JQ0439;B31786;S18487;A47002) adenosylmethionine decarboxy... 253 8e-66
(P79888) RecName: Full=S-adenosylmethionine decarboxylase proenz... 253 1e-65
Y11820_1(Y11820|pid:none) D.melanogaster mRNA for S-adenosylmeth... 228 3e-58
AE014134_1919(AE014134|pid:none) Drosophila melanogaster chromos... 228 4e-58
AK300330_1(AK300330|pid:none) Homo sapiens cDNA FLJ52754 complet... 219 1e-55
AK304351_1(AK304351|pid:none) Homo sapiens cDNA FLJ59608 complet... 213 1e-53
EF086305_1(EF086305|pid:none) Picea sitchensis clone WS0283_L09 ... 209 2e-52
EU381199_1(EU381199|pid:none) Vigna radiata S-adenosylmethionine... 206 1e-51
(Q39676) RecName: Full=S-adenosylmethionine decarboxylase proenz... 205 3e-51
AY054185_1(AY054185|pid:none) Arabidopsis thaliana AT3g02470/F16... 203 1e-50
AY536644_1(AY536644|pid:none) Brassica juncea S-adenosylmethioni... 203 1e-50
EF408870_1(EF408870|pid:none) Medicago sativa subsp. falcata S-a... 202 2e-50
EU924157_1(EU924157|pid:none) Cicer arietinum S-adenosylmethioni... 201 4e-50
(Q9S7T9) RecName: Full=S-adenosylmethionine decarboxylase proenz... 201 4e-50
AM470991_1(AM470991|pid:none) Vitis vinifera contig VV78X209163.... 201 7e-50
AM425654_4(AM425654|pid:none) Vitis vinifera contig VV78X003292.... 201 7e-50
(Q9SDM8) RecName: Full=S-adenosylmethionine decarboxylase proenz... 200 9e-50
AF420239_1(AF420239|pid:none) Dendrobium crumenatum S-adenosyl-L... 199 1e-49
DQ415922_32(DQ415922|pid:none) Cleome spinosa clone BAC Cs1, com... 199 2e-49
(O65354) RecName: Full=S-adenosylmethionine decarboxylase proenz... 199 2e-49
AY444341_1(AY444341|pid:none) Brassica juncea S-adenosyl-L-methi... 199 2e-49
AJ567368_1(AJ567368|pid:none) Vitis vinifera samdc gene for S-ad... 199 2e-49
AB077442_1(AB077442|pid:none) Malus x domestica SAMDC mRNA for S... 198 3e-49
AB062360_1(AB062360|pid:none) Phaseolus lunatus SAMDC mRNA for S... 198 4e-49
AB039958_1(AB039958|pid:none) Acyrthosiphon pisum mRNA for S-ade... 198 4e-49
(Q42679) RecName: Full=S-adenosylmethionine decarboxylase proenz... 197 6e-49
(O49972) RecName: Full=S-adenosylmethionine decarboxylase proenz... 197 6e-49
CU640366_825(CU640366|pid:none) Podospora anserina genomic DNA c... 197 6e-49
FJ496345_1(FJ496345|pid:none) Citrus sinensis S-adenosylmethioni... 197 7e-49
AB025639_22(AB025639|pid:none) Arabidopsis thaliana genomic DNA,... 197 9e-49
(Q9M4D8) RecName: Full=S-adenosylmethionine decarboxylase proenz... 197 9e-49
(O76240) RecName: Full=S-adenosylmethionine decarboxylase proenz... 196 1e-48
EF467294_1(EF467294|pid:none) Saccharum officinarum S-adenosylme... 196 2e-48
AF488307_1(AF488307|pid:none) Glycine max S-adenosylmethionine d... 196 2e-48
AJ251899_1(AJ251899|pid:none) Oryza sativa mRNA for S-adenosylme... 196 2e-48
CT005267_333(CT005267|pid:none) Leishmania major strain Friedlin... 196 2e-48
EU964292_1(EU964292|pid:none) Zea mays clone 277680 S-adenosylme... 196 2e-48
U63633_1(U63633|pid:none) Arabidopsis thaliana S-adenosylmethion... 196 2e-48
AM494967_310(AM494967|pid:none) Leishmania braziliensis chromoso... 195 4e-48
(Q25264) RecName: Full=S-adenosylmethionine decarboxylase proenz... 194 5e-48
AF512545_1(AF512545|pid:none) X Citrofortunella mitis S-adenosyl... 194 5e-48
(Q9NGA0) RecName: Full=S-adenosylmethionine decarboxylase proenz... 194 5e-48
AJ841703_1(AJ841703|pid:none) Chlamydomonas reinhardtii mRNA for... 194 5e-48
CR382131_831(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 194 6e-48
(Q96555) RecName: Full=S-adenosylmethionine decarboxylase proenz... 193 1e-47
(Q42829) RecName: Full=S-adenosylmethionine decarboxylase proenz... 192 2e-47
(Q43820) RecName: Full=S-adenosylmethionine decarboxylase proenz... 192 2e-47
EU077826_1(EU077826|pid:none) Solanum chilense putative S-adenos... 191 4e-47
AM461265_1(AM461265|pid:none) Vitis vinifera contig VV78X014991.... 191 7e-47
EU077824_1(EU077824|pid:none) Solanum chilense putative S-adenos... 190 9e-47
EU077770_1(EU077770|pid:none) Solanum peruvianum putative S-aden... 190 9e-47
EU077832_1(EU077832|pid:none) Solanum chilense putative S-adenos... 190 1e-46
(O02655) RecName: Full=S-adenosylmethionine decarboxylase proenz... 190 1e-46
EU077805_1(EU077805|pid:none) Solanum chilense putative S-adenos... 189 2e-46
AM270208_14(AM270208|pid:none) Aspergillus niger contig An09c019... 189 2e-46
AF033100_1(AF033100|pid:none) Nicotiana tabacum S-adenosylmethio... 189 2e-46
S52662(S52662;S28047) adenosylmethionine decarboxylase (EC 4.1.1... 189 2e-46
AF117660_1(AF117660|pid:none) Triticum aestivum S-adenosylmethio... 189 2e-46
AY941586_1(AY941586|pid:none) Lycopersicon peruvianum putative S... 189 2e-46
(O80402) RecName: Full=S-adenosylmethionine decarboxylase proenz... 189 2e-46
EU077794_1(EU077794|pid:none) Solanum peruvianum putative S-aden... 189 2e-46
EU077819_1(EU077819|pid:none) Solanum chilense putative S-adenos... 189 2e-46
(Q04694) RecName: Full=S-adenosylmethionine decarboxylase proenz... 189 2e-46
EU077785_1(EU077785|pid:none) Solanum peruvianum putative S-aden... 189 2e-46
DQ103354_1(DQ103354|pid:none) Solanum lycopersicoides putative S... 189 3e-46
AY941605_1(AY941605|pid:none) Solanum habrochaites putative S-ad... 189 3e-46
EU077807_1(EU077807|pid:none) Solanum chilense putative S-adenos... 188 3e-46
AL606594_4(AL606594|pid:none) Oryza sativa genomic DNA, chromoso... 188 3e-46
EU077797_1(EU077797|pid:none) Solanum peruvianum putative S-aden... 188 3e-46
EU077802_1(EU077802|pid:none) Solanum peruvianum putative S-aden... 188 3e-46
(Q0JC10) RecName: Full=S-adenosylmethionine decarboxylase proenz... 188 3e-46
EU077822_1(EU077822|pid:none) Solanum chilense putative S-adenos... 188 4e-46
EU968400_1(EU968400|pid:none) Zea mays clone 320392 S-adenosylme... 187 6e-46
DQ103355_1(DQ103355|pid:none) Lycopersicon chmielewskii putative... 187 6e-46
(A2XV58) RecName: Full=S-adenosylmethionine decarboxylase proenz... 187 7e-46
AY941584_1(AY941584|pid:none) Lycopersicon peruvianum putative S... 187 7e-46
AL442115_2(AL442115|pid:none) Oryza sativa genomic DNA, chromoso... 187 7e-46
EU077792_1(EU077792|pid:none) Solanum peruvianum putative S-aden... 187 7e-46
AP007162_478(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 186 1e-45
EU077783_1(EU077783|pid:none) Solanum peruvianum putative S-aden... 186 2e-45
(O24575) RecName: Full=S-adenosylmethionine decarboxylase proenz... 186 2e-45
AM450267_1(AM450267|pid:none) Vitis vinifera contig VV78X266870.... 184 5e-45
AY966487_1(AY966487|pid:none) Oryza sativa (indica cultivar-grou... 184 8e-45
EF147068_1(EF147068|pid:none) Populus trichocarpa clone WS01227_... 184 8e-45
AY327898_1(AY327898|pid:none) Phaseolus vulgaris S-adenosylmethi... 181 7e-44
EF147784_1(EF147784|pid:none) Populus trichocarpa clone WS0125_A... 180 9e-44
CR954213_89(CR954213|pid:none) Ostreococcus tauri strain OTTH059... 177 1e-42
AJ704800_1(AJ704800|pid:none) Prunus persica partial samdc gene ... 175 3e-42
DQ217414_1(DQ217414|pid:none) Arabidopsis thaliana S-adenosylmet... 172 2e-41
FN392320_210(FN392320|pid:none) Pichia pastoris GS115 chromosome... 172 3e-41
AB293419_1(AB293419|pid:none) Triticum turgidum mRNA for S-adeno... 169 3e-40
DQ173767_1(DQ173767|pid:none) Populus maximowiczii x Populus nig... 168 4e-40
(P21182) RecName: Full=S-adenosylmethionine decarboxylase proenz... 166 1e-39
CP001326_21(CP001326|pid:none) Micromonas sp. RCC299 chromosome ... 161 4e-38
EU823928_1(EU823928|pid:none) Populus tremula isolate swl160-63 ... 159 3e-37
EU823915_1(EU823915|pid:none) Populus tremula isolate swl160-3 S... 158 4e-37
EU823938_1(EU823938|pid:none) Populus tremula isolate swl160-95 ... 158 4e-37
EU823924_1(EU823924|pid:none) Populus tremula isolate swl160-43 ... 157 6e-37
EU823922_1(EU823922|pid:none) Populus tremula isolate swl160-31 ... 157 6e-37
EU823914_1(EU823914|pid:none) Populus tremula isolate swl160-3 S... 157 6e-37
EU823935_1(EU823935|pid:none) Populus tremula isolate swl160-84 ... 157 8e-37
EU823919_1(EU823919|pid:none) Populus tremula isolate swl160-16 ... 157 8e-37
EU823918_1(EU823918|pid:none) Populus tremula isolate swl160-16 ... 157 8e-37
EU823931_1(EU823931|pid:none) Populus tremula isolate swl160-75 ... 157 8e-37
BT075084_1(BT075084|pid:none) Osmerus mordax clone omor-rgc-515-... 157 8e-37
CR382137_513(CR382137|pid:none) Debaryomyces hansenii strain CBS... 156 2e-36
FM992692_70(FM992692|pid:none) Candida dubliniensis CD36 chromos... 155 2e-36
AL357515_3(AL357515|pid:none) Human DNA sequence from clone RP11... 155 3e-36
CR380954_106(CR380954|pid:none) Candida glabrata strain CBS138 c... 152 2e-35
CU928169_596(CU928169|pid:none) Kluyveromyces thermotolerans str... 150 1e-34
AM156953_1(AM156953|pid:none) Plantago major partial mRNA for S-... 149 2e-34
CP000507_1955(CP000507|pid:none) Shewanella amazonensis SB2B, co... 149 2e-34
AK302761_1(AK302761|pid:none) Homo sapiens cDNA FLJ52467 complet... 145 3e-33
CP000753_1732(CP000753|pid:none) Shewanella baltica OS185, compl... 144 7e-33
CP000563_1739(CP000563|pid:none) Shewanella baltica OS155, compl... 142 4e-32
AJ427634_1(AJ427634|pid:none) Vitis vinifera partial mRNA for S-... 139 2e-31
CP000891_1795(CP000891|pid:none) Shewanella baltica OS195, compl... 137 1e-30
CP000447_1687(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 134 1e-29
CP000851_2470(CP000851|pid:none) Shewanella pealeana ATCC 700345... 131 6e-29
CP000302_2262(CP000302|pid:none) Shewanella denitrificans OS217,... 130 1e-28
CP000501_277(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 129 2e-28
CP000446_1554(CP000446|pid:none) Shewanella sp. MR-4, complete g... 126 2e-27
CP000681_1637(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 125 3e-27
CP000469_1613(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 123 1e-26
CP000931_1793(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 122 2e-26
AY651064_1(AY651064|pid:none) Mangifera indica S-adenosylmethion... 121 5e-26
AJ252213_1(AJ252213|pid:none) Oryza sativa partial adometDC1 gen... 120 1e-25
CP000821_2602(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 120 1e-25
CP000961_2041(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 117 9e-25
CP000472_2892(CP000472|pid:none) Shewanella piezotolerans WP3, c... 115 5e-24
AM159097_1(AM159097|pid:none) Plantago major partial mRNA for S-... 102 2e-20
BT051817_1(BT051817|pid:none) Medicago truncatula clone MTYF5_F6... 101 5e-20
AY231894_1(AY231894|pid:none) Drosophila yakuba clone yak-em_Sam... 97 2e-18
DQ173764_1(DQ173764|pid:none) Populus maximowiczii x Populus nig... 93 2e-17
AE014134_1920(AE014134|pid:none) Drosophila melanogaster chromos... 88 8e-16
AF153765_1(AF153765|pid:none) Emericella nidulans S-adenosylmeth... 87 1e-15
CP000510_360(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 84 9e-15
AF321141_1(AF321141|pid:none) Nicotiana tabacum S-adenosylmethio... 82 4e-14
EF576290_1(EF576290|pid:none) Oryza sativa (indica cultivar-grou... 80 2e-13
EU954132_1(EU954132|pid:none) Zea mays clone 1456465 unknown mRNA. 77 1e-12
EF576004_1(EF576004|pid:none) Oryza sativa (indica cultivar-grou... 75 4e-12
AF018285_1(AF018285|pid:none) Ipomoea nil S-adenosylmethionine d... 67 1e-09
AK119012_1(AK119012|pid:none) Arabidopsis thaliana mRNA for unkn... 60 2e-07
AF112367_1(AF112367|pid:none) Plasmodium falciparum S-adenosylme... 55 8e-06
AM910988_177(AM910988|pid:none) Plasmodium knowlesi strain H chr... 50 1e-04
AL365206_4(AL365206|pid:none) Human DNA sequence from clone RP1-... 47 0.002
PDBN(1JEN)B MOL_ID: 1;MOL_ID: 1; MOLECULE: S-ADENOSYLMETHIONINE ... 45 0.005
CP000246_2761(CP000246|pid:none) Clostridium perfringens ATCC 13... 39 0.33
FJ378317_1(FJ378317|pid:none) HIV-1 isolate 3430_029_01 from Bot... 36 2.8
FJ378308_1(FJ378308|pid:none) HIV-1 isolate 3430_00_04 from Bots... 36 3.6
FJ378307_1(FJ378307|pid:none) HIV-1 isolate 3430_00_03 from Bots... 36 3.6
FJ378337_1(FJ378337|pid:none) HIV-1 isolate 3430_120_09 from Bot... 36 3.6
FJ378319_1(FJ378319|pid:none) HIV-1 isolate 3430_029_03 from Bot... 36 3.6
FJ378305_1(FJ378305|pid:none) HIV-1 isolate 3430_00_01 from Bots... 36 3.6
FJ378315_1(FJ378315|pid:none) HIV-1 isolate 3430_00_11 from Bots... 36 3.6
FJ378340_1(FJ378340|pid:none) HIV-1 isolate 3430_120_12 from Bot... 36 3.6
FJ378339_1(FJ378339|pid:none) HIV-1 isolate 3430_120_11 from Bot... 36 3.6
FJ378375_1(FJ378375|pid:none) HIV-1 isolate 3430_374_08 from Bot... 36 3.6
FJ378355_1(FJ378355|pid:none) HIV-1 isolate 3430_275_07 from Bot... 36 3.6
FJ378366_1(FJ378366|pid:none) HIV-1 isolate 3430_309_07 from Bot... 36 3.6
FJ378369_1(FJ378369|pid:none) HIV-1 isolate 3430_374_02 from Bot... 36 3.6
FJ378367_1(FJ378367|pid:none) HIV-1 isolate 3430_309_08 from Bot... 36 3.6
FJ378332_1(FJ378332|pid:none) HIV-1 isolate 3430_120_04 from Bot... 36 3.6
FJ378334_1(FJ378334|pid:none) HIV-1 isolate 3430_120_06 from Bot... 36 3.6
FJ378346_1(FJ378346|pid:none) HIV-1 isolate 3430_244_06 from Bot... 35 4.7
FJ378331_1(FJ378331|pid:none) HIV-1 isolate 3430_120_03 from Bot... 35 4.7
FJ378372_1(FJ378372|pid:none) HIV-1 isolate 3430_374_05 from Bot... 35 8.1
AP003292_14(AP003292|pid:none) Oryza sativa Japonica Group genom... 35 8.1

>(Q8T1E3) RecName: Full=S-adenosylmethionine decarboxylase proenzyme;
Short=AdoMetDC; Short=SAMDC;
EC=4.1.1.50; Contains: RecName:
Full=S-adenosylmethionine decarboxylase alpha chain;
Contains: RecName: Full=S-adenosylmethionine
decarboxylase beta chain; Flags: Precursor;
Length = 379

Score = 774 bits (1999), Expect = 0.0
Identities = 378/379 (99%), Positives = 379/379 (100%)
Frame = +2

Query: 68 MPIMSTEIFNEADAGFVYQSNSNDYSDGFEGPEKKLDIRFGPISKGSVKSIAGSPSKVGL 247
MPI+STEIFNEADAGFVYQSNSNDYSDGFEGPEKKLDIRFGPISKGSVKSIAGSPSKVGL
Sbjct: 1 MPILSTEIFNEADAGFVYQSNSNDYSDGFEGPEKKLDIRFGPISKGSVKSIAGSPSKVGL 60

Query: 248 RTIDKEKWQTVLDSARCTIISQTSNDHMDSYVLSESSLFVYPRRAMIKTCGTTTLLHLIA 427
RTIDKEKWQTVLDSARCTIISQTSNDHMDSYVLSESSLFVYPRRAMIKTCGTTTLLHLIA
Sbjct: 61 RTIDKEKWQTVLDSARCTIISQTSNDHMDSYVLSESSLFVYPRRAMIKTCGTTTLLHLIA 120

Query: 428 KMVQVGKECGLEVEMVVFSRKNLNQPSKQVFPHCSFSDEVNFLNKIFDGQAYVMGDVNKD 607
KMVQVGKECGLEVEMVVFSRKNLNQPSKQVFPHCSFSDEVNFLNKIFDGQAYVMGDVNKD
Sbjct: 121 KMVQVGKECGLEVEMVVFSRKNLNQPSKQVFPHCSFSDEVNFLNKIFDGQAYVMGDVNKD 180

Query: 608 HWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPG 787
HWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPG
Sbjct: 181 HWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPG 240

Query: 788 SMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDTNVALADYNQLLAKVLNVFK 967
SMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDTNVALADYNQLLAKVLNVFK
Sbjct: 241 SMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDTNVALADYNQLLAKVLNVFK 300

Query: 968 PGRFTAALYAEDGAPCGDPYTAFDVNVPSYAIQNKTVHGFDGGYDVVVSNYQQLDKKVNF 1147
PGRFTAALYAEDGAPCGDPYTAFDVNVPSYAIQNKTVHGFDGGYDVVVSNYQQLDKKVNF
Sbjct: 301 PGRFTAALYAEDGAPCGDPYTAFDVNVPSYAIQNKTVHGFDGGYDVVVSNYQQLDKKVNF 360

Query: 1148 SNDDLIQSIESTNIDLIQV 1204
SNDDLIQSIESTNIDLIQV
Sbjct: 361 SNDDLIQSIESTNIDLIQV 379

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,131,099,683
Number of extensions: 43244860
Number of successful extensions: 109058
Number of sequences better than 10.0: 176
Number of HSP's gapped: 108586
Number of HSP's successfully gapped: 188
Length of query: 448
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 316
Effective length of database: 623,955,076
Effective search space: 197169804016
Effective search space used: 197169804016
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.36 alm: 0.45 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
36.0 %: nuclear
8.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: vesicles of secretory system

>> prediction for Contig-U03011-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0