Contig-U15405-1
Contig ID Contig-U15405-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15405-1 (Contig-U15405-1Q) /CSM_Contig/Contig-U15405-1Q.Seq.d
ANATTTAAAAAAAAAANTTTTTTAATTTATAAANAAAAAAAAAAAAATAA
AATAAAAAAATAAAAAAAAAAATTAATAAATTTATATATATAATTTATAT

Gap no gap
Contig length 100
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 1
Number of EST 1
Link to clone list U15405
List of clone(s)

est1=SFJ785Z,1,100
Translated Amino Acid sequence
XFKKKXFLIYKXKKKNKIKK*kkklinlyi*fi


Translated Amino Acid sequence (All Frames)
Frame A:
XFKKKXFLIYKXKKKNKIKK*kkklinlyi*fi


Frame B:
xlkkkxf*fixkkkkik*knkkkn**iyiynly


Frame C:
i*kkxffnl*xkkkk*nkkikkkinkfiyiiy


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15405-1 (Contig-U15405-1Q)
/CSM_Contig/Contig-U15405-1Q.Seq.d
(100 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15405-1 (Contig-U15405-1Q) /CSM_Contig/Conti... 56 1e-08
Contig-U07916-1 (Contig-U07916-1Q) /CSM_Contig/Conti... 52 1e-07
Contig-U15110-1 (Contig-U15110-1Q) /CSM_Contig/Conti... 42 1e-04
Contig-U11094-1 (Contig-U11094-1Q) /CSM_Contig/Conti... 40 6e-04
Contig-U02289-1 (Contig-U02289-1Q) /CSM_Contig/Conti... 40 6e-04
Contig-U15478-1 (Contig-U15478-1Q) /CSM_Contig/Conti... 38 0.002
Contig-U15192-1 (Contig-U15192-1Q) /CSM_Contig/Conti... 38 0.002
Contig-U12626-1 (Contig-U12626-1Q) /CSM_Contig/Conti... 38 0.002
Contig-U14348-1 (Contig-U14348-1Q) /CSM_Contig/Conti... 36 0.009
Contig-U04708-1 (Contig-U04708-1Q) /CSM_Contig/Conti... 36 0.009

>Contig-U15405-1 (Contig-U15405-1Q) /CSM_Contig/Contig-U15405-1Q.Seq.d
Length = 100

Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 73 ttaataaatttatatatataatttatat 100
||||||||||||||||||||||||||||
Sbjct: 73 ttaataaatttatatatataatttatat 100


>Contig-U07916-1 (Contig-U07916-1Q) /CSM_Contig/Contig-U07916-1Q.Seq.d
Length = 490

Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 74 taataaatttatatatataatttata 99
||||||||||||||||||||||||||
Sbjct: 465 taataaatttatatatataatttata 490


>Contig-U15110-1 (Contig-U15110-1Q) /CSM_Contig/Contig-U15110-1Q.Seq.d
Length = 1169

Score = 42.1 bits (21), Expect = 1e-04
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus


Query: 73 ttaataaatttatatatata-atttatat 100
|||||||||||||||||||| ||||||||
Sbjct: 1120 ttaataaatttatatatatatatttatat 1148


Score = 28.2 bits (14), Expect = 2.2
Identities = 17/18 (94%)
Strand = Plus / Minus


Query: 76 ataaatttatatatataa 93
|||||| |||||||||||
Sbjct: 1146 ataaatatatatatataa 1129


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2685
Number of Sequences: 8402
Number of extensions: 2685
Number of successful extensions: 1161
Number of sequences better than 10.0: 443
length of query: 100
length of database: 8,075,542
effective HSP length: 14
effective length of query: 86
effective length of database: 7,957,914
effective search space: 684380604
effective search space used: 684380604
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 13 (26.3 bits)
dna update 2009. 1.25
Homology vs DNA
Query= Contig-U15405-1 (Contig-U15405-1Q) /CSM_Contig/Contig-U15405-1Q.Seq.d
(100 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ402219) Dictyostelium discoideum cDNA clone:dds20j21, 3' ... 56 2e-04 1
(DQ012456) Amorphophallus scutatus tRNA-Leu (trnL) gene, par... 54 8e-04 1
(BJ402657) Dictyostelium discoideum cDNA clone:dds17j13, 3' ... 54 8e-04 1
(CU550687) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.003 1
(CU463871) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.003 1
(AL607077) Human DNA sequence from clone RP11-374I15 on chro... 50 0.013 1
(AL390789) Human DNA sequence from clone RP11-572N15 on chro... 50 0.013 1
(AL390335) Human chromosome 14 DNA sequence BAC R-757K12 of ... 50 0.013 1
(AC144500) Canis lupus familiaris clone RP81-387G21, WORKING... 50 0.013 1
(AC109957) Rattus norvegicus clone CH230-311O19, WORKING DRA... 50 0.013 1
(AC095596) Rattus norvegicus clone CH230-8M1, *** SEQUENCING... 50 0.013 1
(AC186095) Microcebus murinus clone CH257-203E5, WORKING DRA... 50 0.013 1
(AC011032) Homo sapiens clone RP11-4E8, WORKING DRAFT SEQUENCE. 50 0.013 1
(CL502362) SAIL_711_E10.v2 SAIL Collection Arabidopsis thali... 50 0.013 1
(CE522235) tigr-gss-dog-17000365659800 Dog Library Canis lup... 50 0.013 1
(BS000101) Pan troglodytes chromosome 22 clone:PTB-115B20, m... 44 0.032 2
(AL592077) Zebrafish DNA sequence from clone XX-DZ35C18. 48 0.051 1
(AX458578) Sequence 124 from Patent WO0246454. 48 0.051 1
(AX458577) Sequence 123 from Patent WO0246454. 48 0.051 1
(AL078595) Human DNA sequence from clone RP3-399J4 on chromo... 48 0.051 1
(AC007681) Homo sapiens BAC clone RP11-355F16 from 2, comple... 48 0.051 1
(AC007110) Homo sapiens chromosome 6, clone hRPK.472_J_18, c... 48 0.051 1
(DC204584) Plasmodium berghei strain ANKA cDNA clone:MG00400... 48 0.051 1
(BF295861) 029PbC09 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 48 0.051 1
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 42 0.10 2
(BX469928) Zebrafish DNA sequence from clone DKEYP-47C5 in l... 46 0.20 1
(AC212917) Pan troglodytes BAC clone CH251-483F6 from chromo... 46 0.20 1
(AC188687) Pan troglodytes BAC clone CH251-721E1 from chromo... 46 0.20 1
(AM439045) Vitis vinifera contig VV78X078311.2, whole genome... 46 0.20 1
(DJ051008) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 46 0.20 1
(DI106870) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 46 0.20 1
(CS083866) Sequence 49 from Patent WO2005040377. 46 0.20 1
(EU019100) Nomada stigma isolate 42 NADH dehydrogenase subun... 46 0.20 1
(EU019099) Nomada stigma isolate 25 NADH dehydrogenase subun... 46 0.20 1
(EU019098) Nomada stigma isolate 9 NADH dehydrogenase subuni... 46 0.20 1
(AB178317) Phelotrupes laevistriatus mitochondrial gene for ... 46 0.20 1
(AL593856) Human DNA sequence from clone RP11-8J9 on chromos... 46 0.20 1
(AC092441) Homo sapiens BAC clone RP11-455K24 from 7, comple... 46 0.20 1
(CT027544) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.20 1
(AC233018) Monodelphis domestica clone VMRC18-633P20, WORKIN... 46 0.20 1
(AC225953) Callithrix jacchus clone CH259-335C5, WORKING DRA... 46 0.20 1
(AC013593) Homo sapiens clone RP11-8J9, WORKING DRAFT SEQUEN... 46 0.20 1
(EJ970680) 1093022078606 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.20 1
(EI837452) POTI744TR Solanum tuberosum RHPOTKEY BAC ends Sol... 46 0.20 1
(DX564728) MUGQ_CH252P039I05Sp6_AV845_023 CHORI-252 Vervet M... 46 0.20 1
(AG350139) Mus musculus molossinus DNA, clone:MSMg01-146K14.... 46 0.20 1
(DB919795) Idiosepius paradoxus cDNA, clone:Ip_aB_036_D18, 5... 46 0.20 1
(DV798470) Hw_loin_8_050812_A06 Bos taurus CF-24-HW loin cDN... 36 0.39 2
(AC231013) Bos taurus clone CH240-493O22, WORKING DRAFT SEQU... 32 0.43 2
(AC208381) Pan troglodytes BAC clone CH251-707A4 from chromo... 34 0.44 2
(AC113899) Rattus norvegicus clone CH230-329K9, *** SEQUENCI... 34 0.44 2
(AC188555) Pan troglodytes BAC clone CH251-349E22 from chrom... 34 0.44 2
(AL133330) Human DNA sequence from clone RP1-68D18 on chromo... 32 0.44 2
(AC164861) Bos taurus clone CH240-151F15, *** SEQUENCING IN ... 32 0.44 2
(AC009408) Homo sapiens BAC clone RP11-227I18 from 2, comple... 36 0.44 2
(AC158996) Mus musculus BAC clone RP24-137I10 from chromosom... 32 0.44 2
(AL589986) Human DNA sequence from clone RP11-107M16 on chro... 32 0.45 2
(EA333138) Sequence 5630 from patent US 7306913. 32 0.45 2
(CS741912) Sequence 9908 from Patent WO2005083127. 32 0.45 2
(EA427609) Sequence 88 from patent US 7332281. 32 0.46 2
(DL007628) NOVEL THERAPEUTIC TARGETS IN CANCER. 32 0.46 2
(AK078635) Mus musculus adult male adrenal gland cDNA, RIKEN... 32 0.56 2
(AF293659) Anopheles anthropophagus 12S ribosomal RNA gene, ... 32 0.57 2
(AF293660) Anopheles yatsushiroensis 12S ribosomal RNA gene,... 32 0.57 2
(AF293658) Anopheles anthropophagus 12S ribosomal RNA gene, ... 32 0.57 2
(AG062500) Pan troglodytes DNA, clone: PTB-050N22.R. 32 0.58 2
(AV355474) Mus musculus adult male adrenal gland cDNA, RIKEN... 32 0.58 2
(CK336914) C0276C04-3 NIA Mouse 7.5-dpc Whole Embryo cDNA Li... 32 0.58 2
(BQ558232) H4051A02-3 NIA Mouse 7.4K cDNA Clone Set Mus musc... 32 0.58 2
(CR855323) Zebrafish DNA sequence from clone DKEY-147H17. 44 0.80 1
(CR385047) Zebrafish DNA sequence from clone DKEY-221N16 in ... 44 0.80 1
(CR318626) Zebrafish DNA sequence from clone DKEY-29L7 in li... 44 0.80 1
(BX510338) Zebrafish DNA sequence from clone CH211-202F5 in ... 44 0.80 1
(BX470164) Zebrafish DNA sequence from clone DKEY-24L11 in l... 44 0.80 1
(BX323829) Zebrafish DNA sequence from clone RP71-14B1 in li... 44 0.80 1
(BX119314) Zebrafish DNA sequence from clone DKEY-18H19 in l... 44 0.80 1
(BV933351) pRRL2:Newb:20080411:313323 USMARC Pig Breed SNP D... 44 0.80 1
(BV496567) S217P61297FA3.T0 Noemie Pan troglodytes troglodyt... 44 0.80 1
(BV495481) S217P61918FE2.T0 Noemie Pan troglodytes troglodyt... 44 0.80 1
(BV436248) S237P6495RF5.T0 PortugueseWaterDog Canis familiar... 44 0.80 1
(BV312740) S236P6251RE11.T0 AlaskanMalamute Canis familiaris... 44 0.80 1
(AL672300) Mouse DNA sequence from clone RP23-446K8 on chrom... 44 0.80 1
(AC160633) Mus musculus chromosome 8, clone RP23-407P24, com... 44 0.80 1
(AC116895) Mus musculus chromosome 8, clone RP24-531C8, comp... 44 0.80 1
(AC198908) Rhesus Macaque BAC CH250-180D24 () complete sequ... 44 0.80 1
(AC192811) Pan troglodytes BAC clone CH251-58D14 from chromo... 44 0.80 1
(AC191648) Pongo abelii BAC clone CH276-55H12 from chromosom... 44 0.80 1
(AC183989) Pan troglodytes BAC clone CH251-207E6 from chromo... 44 0.80 1
(AC147065) Pan troglodytes BAC clone RP43-163G7 from chromos... 44 0.80 1
(X95973) S.douglasii mitochondrial OXI1 & RF1 genes. 44 0.80 1
(AC189568) Brassica rapa subsp. pekinensis clone KBrH009I04,... 44 0.80 1
(DJ051174) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 44 0.80 1
(DJ051156) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 44 0.80 1
(DI107157) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 44 0.80 1
(DI107061) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 44 0.80 1
(CS084032) Sequence 215 from Patent WO2005040377. 44 0.80 1
(CS084014) Sequence 197 from Patent WO2005040377. 44 0.80 1
(AL031744) Plasmodium falciparum DNA from MAL1P1. 44 0.80 1
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 44 0.80 1
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 44 0.80 1
(Z98750) Human DNA sequence from clone RP3-454G6 on chromoso... 44 0.80 1
(AL358292) Human chromosome 14 DNA sequence BAC R-736P16 of ... 44 0.80 1
(AL356032) Human chromosome 14 DNA sequence BAC R-802A16 of ... 44 0.80 1
(AL161786) Human DNA sequence from clone RP11-344L17 on chro... 44 0.80 1
(AL161618) Human DNA sequence from clone RP11-268F1 on chrom... 44 0.80 1
(AF282854) Homo sapiens chromosome X clone RP11-157E12 map q... 44 0.80 1
(AC127383) Homo sapiens BAC clone RP11-1388F24 from 2, compl... 44 0.80 1
(AC117421) Homo sapiens 3 BAC RP11-147F23 (Roswell Park Canc... 44 0.80 1
(AC112485) Homo sapiens 3 BAC RP11-776B11 (Roswell Park Canc... 44 0.80 1
(AC109587) Homo sapiens chromosome 3 clone CTD-2013N24, comp... 44 0.80 1
(AC107979) Homo sapiens chromosome 15, clone CTD-3049M7, com... 44 0.80 1
(AC105398) Homo sapiens BAC clone RP11-656O12 from 2, comple... 44 0.80 1
(AC104788) Homo sapiens BAC clone RP11-128I4 from 2, complet... 44 0.80 1
(AC104647) Homo sapiens BAC clone RP11-38D12 from 4, complet... 44 0.80 1
(AC103996) Homo sapiens chromosome 15, clone RP11-76E17, com... 44 0.80 1
(AC083863) Homo sapiens chromosome 7 clone RP11-162O1, compl... 44 0.80 1
(AC078788) Homo sapiens 3 BAC RP11-292E2 (Roswell Park Cance... 44 0.80 1
(AC074338) Human Chromosome 7 clone RP11-81O10, complete seq... 44 0.80 1
(AC068733) Homo sapiens chromosome 11, clone RP11-304C12, co... 44 0.80 1
(AC067990) Homo sapiens chromosome 11, clone RP11-682M10, co... 44 0.80 1
(AC022150) Homo sapiens chromosome 19 clone CTD-3099C6, comp... 44 0.80 1
(AC020589) Homo sapiens BAC clone RP11-143G24 from 4, comple... 44 0.80 1
(AC018647) Homo sapiens chromosome 7 clone RP11-379H18, comp... 44 0.80 1
(AC010595) Homo sapiens chromosome 5 clone CTC-480C2, comple... 44 0.80 1
(AC006369) Homo sapiens BAC clone RP11-278G12 from 2, comple... 44 0.80 1
(AC005968) Homo sapiens chromosome 18, clone hRPK.24_A_23, c... 44 0.80 1
(AC154949) Bos taurus clone CH240-42J19, WORKING DRAFT SEQUE... 44 0.80 1
(AC152874) Bos taurus clone CH240-17H9, WORKING DRAFT SEQUEN... 44 0.80 1
(AC140973) Papio hamadryas clone RP41-171E5, WORKING DRAFT S... 44 0.80 1
(AC136933) Homo sapiens chromosome 16 clone CTD-2524M11, WOR... 44 0.80 1
(AC136589) Homo sapiens chromosome 16 clone CTD-2054F13, WOR... 44 0.80 1
(AC099151) Rattus norvegicus clone CH230-64J24, WORKING DRAF... 44 0.80 1
(AC098108) Rattus norvegicus clone CH230-121A23, WORKING DRA... 44 0.80 1
(AC097814) Rattus norvegicus clone CH230-34J6, *** SEQUENCIN... 44 0.80 1
(CU929368) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.80 1
(CU694987) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.80 1
(AC093125) Papio anubis clone RP41-223G23, WORKING DRAFT SEQ... 44 0.80 1
(AC068833) Homo sapiens chromosome 2 clone RP11-128I4 map 2,... 44 0.80 1
(AC067985) Homo sapiens chromosome 11 clone RP11-568G13 map ... 44 0.80 1
(AC046179) Homo sapiens chromosome X clone RP11-789M2 map X,... 44 0.80 1
(AC027095) Homo sapiens chromosome 3 clone RP11-776B11 map 3... 44 0.80 1
(CU463087) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.80 1
(CU442757) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.80 1
(CT583674) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.80 1
(CR759965) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.80 1
(AC223544) Bos taurus clone CH240-466I8, WORKING DRAFT SEQUE... 44 0.80 1
(AC219480) Bos taurus clone CH240-333E7, WORKING DRAFT SEQUE... 44 0.80 1
(AC218566) Bos taurus clone CH240-311F23, WORKING DRAFT SEQU... 44 0.80 1
(AC205926) Pongo abelii chromosome UNKNOWN clone CH276-36H14... 44 0.80 1
(AC194176) Zea mays chromosome 1 clone CH201-331N11; ZMMBBc0... 44 0.80 1
(AC193211) Pan troglodytes chromosome 1 clone CH251-646O21, ... 44 0.80 1
(AC171301) Bos taurus clone CH240-257A23, WORKING DRAFT SEQU... 44 0.80 1
(AC019019) Homo sapiens clone RP11-463O15, WORKING DRAFT SEQ... 44 0.80 1
(AC016796) Homo sapiens clone RP11-131D6, WORKING DRAFT SEQU... 44 0.80 1
(AC012521) Homo sapiens chromosome 3 clone RP1-444J24, WORKI... 44 0.80 1
(AC012232) Homo sapiens clone RP11-113C18, WORKING DRAFT SEQ... 44 0.80 1
(BH034343) RPCI-24-369F24.TJ RPCI-24 Mus musculus genomic cl... 44 0.80 1
(AQ614694) HS_5131_B2_G06_T7A RPCI-11 Human Male BAC Library... 44 0.80 1
(FI061320) CHO_OF6649xd21f1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 0.80 1
(FH657167) CHO_OF4405xh03r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.80 1
(FH434808) CHO_OF4980xh15f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.80 1
(FH434027) CHO_OF4979xo14f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.80 1
(FH332764) CHO_OF4580xb04r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.80 1
(FH028883) CHO_OF3167xl02r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 0.80 1
(ET777682) CHO_OF865xh09r1.ab1 CHO_OF Nicotiana tabacum geno... 44 0.80 1
(EI395726) MUGQ_CH252P210C06T7_CN330_029 CHORI-252 Vervet Mo... 44 0.80 1
(ED257929) AUAC-aai28h08.b1 Ascaris suum whole genome shotgu... 44 0.80 1
(DH222005) Oryzias latipes Fosmid clone:GOLWFno551_a03, reve... 44 0.80 1
(CU115777) Equus caballus GSS, BAC clone CH241-227D17, SP6 e... 44 0.80 1
(CG034019) PUJGQ79TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 0.80 1
(CE106920) tigr-gss-dog-17000371169755 Dog Library Canis lup... 44 0.80 1
(CE106919) tigr-gss-dog-17000371169754 Dog Library Canis lup... 44 0.80 1
(CC185255) CH261-142G8_RM1.1 CH261 Gallus gallus genomic clo... 44 0.80 1
(BZ386593) EINDN42TF EI_10_12_KB Entamoeba invadens genomic ... 44 0.80 1
(BH924534) odi60e06.g1 B.oleracea002 Brassica oleracea genom... 44 0.80 1
(EL500733) 040_PFLAB1-S-PLATE12B.AB1 Blood stage Plasmodium ... 44 0.80 1
(EL494742) D06_PFBAMHI-M-T3-PLATE27A.AB1 Blood stage Plasmod... 44 0.80 1
(EL492906) A04_PFBAMHI-M-T7-PLATE8A.AB1 Blood stage Plasmodi... 44 0.80 1
(DW254088) UI-S-GB1-aam-f-05-0-UI.s1 UI-S-GB1 Euprymna scolo... 44 0.80 1
(AU086925) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 44 0.80 1
(CV875684) PDUts1142E06 Porcine testis cDNA library I Sus sc... 44 0.80 1
(FG196235) AGN_PNL224bf1_e12.trimmed.seq AGN_PNL Nicotiana t... 44 0.80 1
(FC806458) CBGC7889.fwd CBGC Lottia gigantea 15h 18h embryos... 44 0.80 1
(BU520897) AGENCOURT_10156803 NIH_MGC_71 Homo sapiens cDNA c... 40 0.97 2
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 40 1.1 2
(CL043983) CH216-59I24_Sp6.1 CH216 Xenopus (Silurana) tropic... 40 1.3 2
(AF267914) Saccharomyces bayanus tRNA-Thr gene, partial sequ... 34 1.3 2
(AL034560) Plasmodium falciparum MAL3P8. 38 1.5 2
(CP000224) Drosophila melanogaster genomic scaffold 21100002... 32 1.5 2
(AC027292) Homo sapiens chromosome 12 clone RP11-327B18, WOR... 32 1.6 2
(AC023584) Homo sapiens chromosome 12 clone RP11-301A17 map ... 32 1.6 2
(AC098548) Rattus norvegicus clone CH230-104F8, *** SEQUENCI... 34 1.6 2
(AC096151) Rattus norvegicus clone CH230-10H21, *** SEQUENCI... 32 1.6 2
(AC108723) Homo sapiens chromosome 12 clone RP11-301A17, WOR... 32 1.6 2
(AC154392) Mus musculus chromosome 1, clone RP23-413K6, comp... 34 1.6 2
(AC118817) Rattus norvegicus clone CH230-447P6, WORKING DRAF... 34 1.6 2
(CU457400) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 1.6 2
(AC134939) Rattus norvegicus clone CH230-375A21, WORKING DRA... 34 1.6 2
(AC068787) Homo sapiens 12 BAC RP11-483I24 (Roswell Park Can... 32 1.6 2
(AG386976) Mus musculus molossinus DNA, clone:MSMg01-201G08.... 32 2.1 2
(DX557032) GH_MBb0077K21r GH_MBb Gossypium hirsutum genomic ... 32 2.1 2
(AG754113) Macaca fuscata fuscata DNA, clone: MSB2-220B04_R,... 32 2.1 2
(CE822503) tigr-gss-dog-17000331929205 Dog Library Canis lup... 34 2.1 2
(CT345729) Sus scrofa genomic clone CH242-5J5, genomic surve... 32 2.1 2
(BG603476) EST502566 Plasmodium yoelii sporozoite cDNA Plasm... 38 2.4 2
(BG603611) EST502701 Plasmodium yoelii sporozoite cDNA Plasm... 38 2.5 2
(BG603475) EST502565 Plasmodium yoelii sporozoite cDNA Plasm... 38 2.5 2
(BZ474220) BONAL20TF BO_1.6_2_KB_tot Brassica oleracea genom... 36 2.8 2
(CU302200) Zebrafish DNA sequence from clone CH211-262E22 in... 42 3.1 1
(CU181911) Zebrafish DNA sequence from clone CH73-220M18 in ... 42 3.1 1
(CU075731) Zebrafish DNA sequence from clone CH73-6D17 in li... 42 3.1 1
(CT009597) Zebrafish DNA sequence from clone CH211-206N3 in ... 42 3.1 1
(CR382295) Zebrafish DNA sequence from clone DKEYP-15G12 in ... 42 3.1 1
(BX571777) Zebrafish DNA sequence from clone CH211-260F1 in ... 42 3.1 1
(BX511183) Zebrafish DNA sequence from clone CH211-51F18 in ... 42 3.1 1
(BX088712) Zebrafish DNA sequence from clone CH211-199H2 in ... 42 3.1 1
(AL935299) Zebrafish DNA sequence from clone DKEY-38M5. 42 3.1 1
(AC147597) Gallus gallus BAC clone CH261-100D18 from chromos... 42 3.1 1
(AC146801) Xenopus (Silurana) tropicalis clone CH216-59H14, ... 42 3.1 1
(BV948462) pRRL2:Newb:20080411:328332 USMARC Pig Breed SNP D... 42 3.1 1
(BV294449) S232P6240FH2.T0 Beagle Canis familiaris STS genom... 42 3.1 1
(AB131914) Homo sapiens DNA, STS on chromosome 6, D6S0292i, ... 42 3.1 1
(AC166749) Mus musculus chromosome 1, clone RP23-463A15, com... 42 3.1 1
(AC108773) Mus musculus chromosome 5, clone RP23-118L1, comp... 42 3.1 1
(AC107674) Mus musculus chromosome 1, clone RP24-302H24, com... 42 3.1 1
(CT005237) Pan troglodytes chromosome X clone RP43-058P20 ma... 42 3.1 1
(AC210852) Pongo abelii BAC clone CH276-368O12 from chromoso... 42 3.1 1
(AC206054) Pan troglodytes BAC clone CH251-172N23 from chrom... 42 3.1 1
(AC191698) Pan troglodytes BAC clone CH251-641G7 from chromo... 42 3.1 1
(AC190221) Pan troglodytes BAC clone CH251-697F15 from chrom... 42 3.1 1
(AC190187) Pan troglodytes BAC clone CH251-582J15 from chrom... 42 3.1 1
(AC183769) Pan troglodytes BAC clone CH251-341N5 from chromo... 42 3.1 1
(AC160569) Pan troglodytes BAC clone CH251-279A4 from chromo... 42 3.1 1
(AC147974) Pan troglodytes BAC clone RP43-67J16 from chromos... 42 3.1 1
(AC146411) Pan troglodytes BAC clone RP43-36G22 from chromos... 42 3.1 1
(AC146149) Pan troglodytes BAC clone RP43-37G13 from chromos... 42 3.1 1
(AC145817) Pan troglodytes BAC clone RP43-6C4 from chromosom... 42 3.1 1
(S66876) Solanum tuberosum apoprotein 2 (Lhca3.St.1) gene, p... 42 3.1 1
(EU124736) Solanum lycopersicum chromosome 3 clone C03HBa014... 42 3.1 1
(AP010258) Solanum lycopersicum DNA, chromosome 8, clone: C0... 42 3.1 1
(AP009520) Solanum lycopersicum DNA, chromosome 8, clone: C0... 42 3.1 1
(AP009516) Solanum lycopersicum DNA, chromosome 8, clone: C0... 42 3.1 1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN... 42 3.1 1
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN... 42 3.1 1
(AP005826) Oryza sativa Japonica Group genomic DNA, chromoso... 42 3.1 1
(AM460139) Vitis vinifera, whole genome shotgun sequence, co... 42 3.1 1
(AM455312) Vitis vinifera contig VV78X045408.8, whole genome... 42 3.1 1
(AM444592) Vitis vinifera contig VV78X086829.6, whole genome... 42 3.1 1
(AM430907) Vitis vinifera contig VV78X124040.8, whole genome... 42 3.1 1
(AC184082) Populus trichocarpa clone Pop1-55P2, complete seq... 42 3.1 1
(AC137634) Oryza sativa Japonica Group chromosome 3 clone OS... 42 3.1 1
(AC137072) Genomic sequence for Oryza sativa, Nipponbare str... 42 3.1 1
(EA697955) Sequence 76834 from patent US 7365185. 42 3.1 1
(EA667936) Sequence 46815 from patent US 7365185. 42 3.1 1
(DJ457570) Method for analysing genome using microsatellite ... 42 3.1 1
(DJ386614) Diagnosis of Diseases Associated with Metastasis. 42 3.1 1
(DJ051103) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 42 3.1 1
(DI106819) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 42 3.1 1
(CS083961) Sequence 144 from Patent WO2005040377. 42 3.1 1
(BD452618) Diagnosis of Diseases Associated with tumor suppr... 42 3.1 1
(AX348678) Sequence 136 from Patent WO0202807. 42 3.1 1
(AX345871) Sequence 942 from Patent WO0200928. 42 3.1 1
(AX344246) Sequence 93 from Patent WO0200926. 42 3.1 1
(AX281410) Sequence 74 from Patent WO0177376. 42 3.1 1
(AX251097) Sequence 65 from Patent WO0168912. 42 3.1 1
(AC186998) Canis Familiaris chromosome 11, clone XX-402C16, ... 42 3.1 1
(AC144403) Felis catus clone RP86-60G24, complete sequence. 42 3.1 1
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 42 3.1 1
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 42 3.1 1
(AE001391) Plasmodium falciparum 3D7 chromosome 2 section 28... 42 3.1 1
(Z82203) Human DNA sequence from clone RP3-360E18 on chromos... 42 3.1 1
(EU368948) Homo sapiens glutamate receptor, metabotropic 8 (... 42 3.1 1
(AP003306) Homo sapiens genomic DNA, chromosome 11q clone:RP... 42 3.1 1
(AP003064) Homo sapiens genomic DNA, chromosome 11q, clone:C... 42 3.1 1
(AL391728) Human DNA sequence from clone RP11-423A18 on chro... 42 3.1 1
(AL356235) Human DNA sequence from clone RP11-142K4 on chrom... 42 3.1 1
(AL354866) Human DNA sequence from clone RP11-69I8 on chromo... 42 3.1 1
(AL354771) Human DNA sequence from clone RP11-545P21 on chro... 42 3.1 1
(AL158074) Human DNA sequence from clone RP11-330J23 on chro... 42 3.1 1
(AL157783) Human DNA sequence from clone RP11-134A8 on chrom... 42 3.1 1
(AL136179) Human DNA sequence from clone RP3-322L4 on chromo... 42 3.1 1
(AC216026) Homo sapiens FOSMID clone ABC11-47190600L19 from ... 42 3.1 1
(AC137494) Homo sapiens chromosome 16 clone LA16c-491E3, com... 42 3.1 1
(AC119675) Homo sapiens chromosome 1 clone RP4-731G4, comple... 42 3.1 1
(AC109592) Homo sapiens BAC clone RP11-750O22 from 4, comple... 42 3.1 1
(AC093847) Homo sapiens BAC clone RP11-484F3 from 4, complet... 42 3.1 1
(AC092079) Homo sapiens chromosome 15 clone RP11-568G20 map ... 42 3.1 1
(AC091700) Homo sapiens chromosome 15 clone CTD-2173F13 map ... 42 3.1 1
(AC090354) Homo sapiens chromosome 18, clone RP11-735P10, co... 42 3.1 1
(AC084128) Homo sapiens chromosome 8, clone CTD-3118D11, com... 42 3.1 1
(AC073951) Homo sapiens BAC clone RP11-38H6 from 2, complete... 42 3.1 1
(AC022168) Homo sapiens chromosome 16 clone RP11-89D3, compl... 42 3.1 1
(AC011631) Homo sapiens, clone RP11-1I20, complete sequence. 42 3.1 1
(AC009435) Homo sapiens chromosome , clone RP11-124B13, comp... 42 3.1 1
(AC009166) Homo sapiens chromosome 16 clone RP11-80B1, compl... 42 3.1 1
(AC008501) Homo sapiens chromosome 5 clone CTC-439N6, comple... 42 3.1 1
(AC007317) Homo sapiens BAC clone RP11-414K7 from 2, complet... 42 3.1 1
(AC002497) Human Cosmid g1940a142 from 7q31.3, complete sequ... 42 3.1 1
(AC158420) Callithrix jacchus clone CH259-40F15, WORKING DRA... 42 3.1 1
(AC157006) Bos taurus clone CH240-65C11, WORKING DRAFT SEQUE... 42 3.1 1
(AC156117) Bos taurus clone CH240-48H11, WORKING DRAFT SEQUE... 42 3.1 1
(AC155377) Zea mays strain B73 clone ZMMBBb0129I15, *** SEQU... 42 3.1 1
(AC150462) Callithrix jacchus clone CH259-461D15, WORKING DR... 42 3.1 1
(AC146628) Papio anubis clone RP41-368N20, WORKING DRAFT SEQ... 42 3.1 1
(AC146124) Pan troglodytes chromosome 7 clone RP43-4J7, WORK... 42 3.1 1
(AC141766) Apis mellifera clone CH224-60D6, WORKING DRAFT SE... 42 3.1 1
(AC135284) Rattus norvegicus clone CH230-145J2, *** SEQUENCI... 42 3.1 1
(AC131170) Rattus norvegicus clone CH230-90B11, *** SEQUENCI... 42 3.1 1
(AC130873) Rattus norvegicus clone CH230-335K5, *** SEQUENCI... 42 3.1 1
(AC123384) Homo sapiens, *** SEQUENCING IN PROGRESS ***, 18 ... 42 3.1 1
(AC121394) Rattus norvegicus clone CH230-526P19, WORKING DRA... 42 3.1 1
(AC119601) Rattus norvegicus clone CH230-387C23, WORKING DRA... 42 3.1 1
(AC116290) Rattus norvegicus clone CH230-100A13, *** SEQUENC... 42 3.1 1
(AC114344) Rattus norvegicus clone CH230-219A5, *** SEQUENCI... 42 3.1 1
(AC113625) Rattus norvegicus clone CH230-64C10, WORKING DRAF... 42 3.1 1
(AC112318) Rattus norvegicus clone CH230-111J6, *** SEQUENCI... 42 3.1 1
(AC098661) Rattus norvegicus clone CH230-121A10, *** SEQUENC... 42 3.1 1
(FP101886) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 3.1 1
(CU915444) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.1 1
(CU914806) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.1 1
(CU855958) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.1 1
(CU695121) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.1 1
(CU571402) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 3.1 1
(AC094162) Rattus norvegicus clone CH230-2O20, WORKING DRAFT... 42 3.1 1
(AC092770) Homo sapiens chromosome 15 clone CTD-2173F13 map ... 42 3.1 1
(AC091101) Homo sapiens chromosome 11 clone RP11-191P12 map ... 42 3.1 1
(AC087484) Homo sapiens chromosome 15 clone RP11-568G20 map ... 42 3.1 1
(AC079189) Homo sapiens chromosome 11 clone RP11-414K17 map ... 42 3.1 1
(AC074200) Homo sapiens chromosome 11 clone RP11-703H8, WORK... 42 3.1 1
(AC073634) Homo sapiens chromosome 1 clone RP11-237B14, WORK... 42 3.1 1
(AC067924) Homo sapiens clone RP11-218L8, WORKING DRAFT SEQU... 42 3.1 1
(AC060230) Homo sapiens chromosome 10 clone RP11-428E24, WOR... 42 3.1 1
(AC034182) Homo sapiens chromosome 3p clone RP11-351l22, WOR... 42 3.1 1
(AC027399) Homo sapiens chromosome 2 clone RP11-659P8 map 2,... 42 3.1 1
(CU468616) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.1 1
(CU467821) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 3.1 1
(CU302235) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 3.1 1
(CU179712) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.1 1
(CT737310) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.1 1
(CT027667) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 3.1 1
(CR940348) Theileria annulata genomic DNA chromosome 2. 42 3.1 1
(BX276116) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 42 3.1 1
(AP007982) Lotus japonicus genomic DNA, chromosome 2, clone:... 42 3.1 1
(AP005539) Oryza sativa Japonica Group genomic DNA, chromoso... 42 3.1 1
(AL606518) Human DNA sequence *** SEQUENCING CANCELLED *** f... 42 3.1 1
(AL592485) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 42 3.1 1
(AL591118) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 42 3.1 1
(AL139261) Human DNA sequence *** SEQUENCING CANCELLED *** f... 42 3.1 1
(AL117346) Human DNA sequence *** SEQUENCING CANCELLED *** f... 42 3.1 1
(AC231974) Zea mays chromosome 3 clone ZMMBBb-390G11; ZMMBBb... 42 3.1 1
(AC230216) Bos taurus clone CH240-518J10, WORKING DRAFT SEQU... 42 3.1 1
(AC218553) Bos taurus clone CH240-311O4, WORKING DRAFT SEQUE... 42 3.1 1
(AC217558) Zea mays chromosome 2 clone CH201-200D16; ZMMBBc0... 42 3.1 1
(AC210311) Zea mays chromosome 1 clone CH201-229L2; ZMMBBc02... 42 3.1 1
(AC204187) Colobus guereza clone CH272-101L10, WORKING DRAFT... 42 3.1 1
(AC202766) Nomascus leucogenys leucogenys clone CH271-55C4, ... 42 3.1 1
(AC197794) Macaca mulatta chromosome UNK clone CH250-414J22,... 42 3.1 1
(AC192892) Echinops telfairi clone CH238-294F6, WORKING DRAF... 42 3.1 1
(AC191501) Sorex araneus clone SA_Ba-395A18, WORKING DRAFT S... 42 3.1 1
(AC189654) Brassica rapa subsp. pekinensis clone KBrS012H18,... 42 3.1 1
(AC186552) Pan troglodytes chromosome 15 clone CH251-734H8, ... 42 3.1 1
(AC185196) Felis catus clone RP86-86E21, WORKING DRAFT SEQUE... 42 3.1 1
(AC175276) Bos taurus clone CH240-473J24, WORKING DRAFT SEQU... 42 3.1 1
(AC173463) Sorex araneus clone SA_Ba-37F6, WORKING DRAFT SEQ... 42 3.1 1
(AC171150) Callithrix jacchus clone CH259-286F6, WORKING DRA... 42 3.1 1
(AC170950) Bos taurus clone CH240-263J23, WORKING DRAFT SEQU... 42 3.1 1
(AC170855) Bos taurus clone CH240-243N24, WORKING DRAFT SEQU... 42 3.1 1
(AC169824) Macaca mulatta clone CH250-207F16, WORKING DRAFT ... 42 3.1 1
(AC169139) Oryctolagus cuniculus clone LB1-237P21, WORKING D... 42 3.1 1
(AC168959) Oryctolagus cuniculus clone LB1-274P2, WORKING DR... 42 3.1 1
(AC165191) Colobus guereza clone CH272-451G23, WORKING DRAFT... 42 3.1 1
(AC164924) Callithrix jacchus clone CH259-148B21, WORKING DR... 42 3.1 1
(AC163182) Bos taurus clone CH240-115K23, WORKING DRAFT SEQU... 42 3.1 1
(AC021378) Homo sapiens clone RP11-26G6, WORKING DRAFT SEQUE... 42 3.1 1
(AC018724) Homo sapiens chromosome 12 clone RP11-566H10, WOR... 42 3.1 1
(AC015737) Homo sapiens clone RP11-1D18, WORKING DRAFT SEQUE... 42 3.1 1
(AC015644) Homo sapiens clone RP11-45P24, WORKING DRAFT SEQU... 42 3.1 1
(AC011123) Homo sapiens chromosome 18 clone RP11-43G13 map 1... 42 3.1 1
(BH541666) BOGST55TR BOGS Brassica oleracea genomic clone BO... 42 3.1 1
(BH514838) BOGTS96TR BOGT Brassica oleracea genomic clone BO... 42 3.1 1
(BH485418) BOGUR61TR BOGU Brassica oleracea genomic clone BO... 42 3.1 1
(AZ747067) RPCI-24-146M4.TJ RPCI-24 Mus musculus genomic clo... 42 3.1 1
(AZ523276) 217PbE04 Pb MBN #21 Plasmodium berghei genomic 3'... 42 3.1 1
(AZ522055) 201PbF04 Pb MBN #21 Plasmodium berghei genomic 3'... 42 3.1 1
(AQ965987) LERIG53TRB LERG Arabidopsis thaliana genomic clon... 42 3.1 1
(AQ965986) LERIG53TR LERG Arabidopsis thaliana genomic clone... 42 3.1 1
(AQ965985) LERIG53TF LERG Arabidopsis thaliana genomic clone... 42 3.1 1
(AQ586215) RPCI-11-432H11.TJ RPCI-11 Homo sapiens genomic cl... 42 3.1 1
(AQ512238) HS_5081_A1_F06_SP6E RPCI-11 Human Male BAC Librar... 42 3.1 1
(AQ356861) CITBI-E1-2537D8.TF CITBI-E1 Homo sapiens genomic ... 42 3.1 1
(FI018249) CHO_OF6923xg20r1.ab1 CHO_OF6 Nicotiana tabacum ge... 42 3.1 1
(FI018171) CHO_OF6923xg20f1.ab1 CHO_OF6 Nicotiana tabacum ge... 42 3.1 1
(FH432999) CHO_OF4947xd22f1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 3.1 1
(ET198989) MUGQ_CH252P398H08T7_CP757_026 CHORI-252 Vervet Mo... 42 3.1 1
(ER811355) PPTI572TR Solanum tuberosum RHPOTKEY BAC ends Sol... 42 3.1 1
(AQ321515) RPCI11-92O18.TV RPCI-11 Homo sapiens genomic clon... 42 3.1 1
(AQ254231) CpG0716B CpIOWAgDNA1 Cryptosporidium parvum genom... 42 3.1 1
(EJ459499) 1093018459198 Global-Ocean-Sampling_GS-28-01-01-1... 42 3.1 1
(EI819341) POTI638TR Solanum tuberosum RHPOTKEY BAC ends Sol... 42 3.1 1
(EI806809) MUGQ_CH252P253L24T7_CN516_086 CHORI-252 Vervet Mo... 42 3.1 1
(EI727319) 2B421025A16TF BAC library from breast tumor sampl... 42 3.1 1
(EI213305) OR__Ba0002K08.f OR__Ba Oryza rufipogon genomic cl... 42 3.1 1
(ED483487) MUGQ_CH252P111H02Sp6_CN62_009 CHORI-252 Vervet Mo... 42 3.1 1
(DX889077) KBrH016D14F KBrH, Brassica rapa HindIII BAC libra... 42 3.1 1
(DX822270) MUGQ_CH252P073I10Sp6_CP15_039 CHORI-252 Vervet Mo... 42 3.1 1
(DX549448) GH_MBb0054L17r GH_MBb Gossypium hirsutum genomic ... 42 3.1 1
(DU979178) KBrH065I21F KBrH (HindIII) BAC library Brassica r... 42 3.1 1
(DU522773) 1098609864829 CHORI-243 Ovis aries genomic clone ... 42 3.1 1
(DU110868) JBnY023K06R Brassica napus BAC library JBnY Brass... 42 3.1 1
(AL392575) T3 end of clone AR0AA005F07 of library AR0AA from... 42 3.1 1
(DU069670) 136187 Tomato HindIII BAC Library Solanum lycoper... 42 3.1 1
(DH672286) Rattus norvegicus DNA, BAC clone: RNB1-222I10, 3'... 42 3.1 1
(DH582877) Rattus norvegicus DNA, BAC clone: RNB1-102H10, 3'... 42 3.1 1
(CZ758029) OC__Ba0110H23.r OC__Ba Oryza coarctata genomic cl... 42 3.1 1
(CW986801) KBrH013E14F KBrH, Brassica rapa HindIII BAC libra... 42 3.1 1
(CT391062) Sus scrofa genomic clone PigE-44N6, genomic surve... 42 3.1 1
(CL836670) OR_CBa0061K14.f OR_CBa Oryza rufipogon genomic cl... 42 3.1 1
(AG917693) Drosophila auraria DNA, clone: DAB1-026G03.R.fa, ... 42 3.1 1
(CL609919) CH240_177N06.TJ CHORI-240 Bos taurus genomic clon... 42 3.1 1
(CL505066) SAIL_744_E05.v3 SAIL Collection Arabidopsis thali... 42 3.1 1
(CC496008) CH240_331J16.T7 CHORI-240 Bos taurus genomic clon... 42 3.1 1
(BZ980453) PUFJE27TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 3.1 1
(BZ980451) PUFJE27TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 3.1 1
(BZ884504) CH240_243N24.TV CHORI-240 Bos taurus genomic clon... 42 3.1 1
(BZ786682) PUGCD21TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 3.1 1
(BZ786676) PUGCD21TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 3.1 1
(BZ597726) WHABD68TF Human MCF7 breast cancer cell line libr... 42 3.1 1
(BZ570961) msh2_1632.x1 msh Pseudomonas aeruginosa genomic c... 42 3.1 1
(BZ173807) CH230-268P9.TJ CHORI-230 Segment 2 Rattus norvegi... 42 3.1 1
(BH962128) odd93d11.g1 B.oleracea002 Brassica oleracea genom... 42 3.1 1
(BH692456) BOMOD51TF BO_2_3_KB Brassica oleracea genomic clo... 42 3.1 1
(AG393630) Mus musculus molossinus DNA, clone:MSMg01-212C21.... 42 3.1 1
(EH045040) AS1RN0P1x738.ab1 Healthy Roots (RN) Arachis steno... 42 3.1 1
(EB501225) 1099435315280 12-DrosW-norm-1P5Kb Drosophila will... 42 3.1 1
(EB501094) 1099435314453 12-DrosW-norm-1P5Kb Drosophila will... 42 3.1 1
(EB501042) 1099435305467 12-DrosW-norm-1P5Kb Drosophila will... 42 3.1 1
(EB491349) 1099341392646 12-DrosW-norm-1P5Kb Drosophila will... 42 3.1 1
(EB487620) 1099341207311 12-DrosW-norm-1P5Kb Drosophila will... 42 3.1 1
(EB487152) 1099341204235 12-DrosW-norm-1P5Kb Drosophila will... 42 3.1 1
(EB456942) 1099341410254 12-DrosW-std-1P6Kb Drosophila willi... 42 3.1 1
(EB453633) 1099341209103 12-DrosW-std-1P6Kb Drosophila willi... 42 3.1 1
(EB453586) 1099341209050 12-DrosW-std-1P6Kb Drosophila willi... 42 3.1 1
(DC871970) Samia cynthia ricini cDNA, clone: S06A01NCLL0001_... 42 3.1 1
(DC235157) Plasmodium berghei strain ANKA cDNA clone:SG03214... 42 3.1 1
(DC208660) Plasmodium berghei strain ANKA cDNA clone:MG00898... 42 3.1 1
(CX899079) JGI_CAAM8377.rev NIH_XGC_tropTe3 Xenopus (Siluran... 42 3.1 1
(CV119563) AGENCOURT_31519105 NICHD_XGC_Te2 Xenopus laevis c... 42 3.1 1
(CO364065) RTK1_13_B01.g1_A029 Roots minus potassium Pinus t... 42 3.1 1
(CN897119) 010630AAZA004619HT (AAZA) M9 xylem Malus x domest... 42 3.1 1
(AJ933600) Theileria annulata EST, clone ta0053G05_3_b. 42 3.1 1
(AJ932573) Theileria annulata EST, clone ta0053G05_2_b. 42 3.1 1
(AJ930881) Theileria annulata EST, clone ta0099C10_b. 42 3.1 1
(CB859153) HI09I10w HI Hordeum vulgare subsp. vulgare cDNA c... 42 3.1 1
(CA775267) io86h07.x1 HR85 islet Homo sapiens cDNA clone IMA... 42 3.1 1
(BW571065) Ciona savignyi cDNA, clone:cscl036o16, 3'end, sin... 42 3.1 1
(BU496665) PfESToab53b12.y1 Plasmodium falciparum 3D7 asexua... 42 3.1 1
(BU496222) PfESToac05d03.y1 Plasmodium falciparum 3D7 asexua... 42 3.1 1
(BU035954) QHJ8H16.yg.ab1 QH_EFGHJ sunflower RHA280 Helianth... 42 3.1 1
(BQ656465) HA04F24u HA Hordeum vulgare subsp. vulgare cDNA c... 42 3.1 1
(BQ632504) il28a04.x1 HR85 islet Homo sapiens cDNA clone IMA... 42 3.1 1
(BM610691) 17000687112101 A.Gam.ad.cDNA.blood1 Anopheles gam... 42 3.1 1
(BM169785) EST572308 PyBS Plasmodium yoelii yoelii cDNA clon... 42 3.1 1
(BM161219) EST563742 PyBS Plasmodium yoelii yoelii cDNA clon... 42 3.1 1
(FM249019) Caenorhabditis elegans EST, clone F08_ce4.trans.... 42 3.1 1
(FK906883) EST_lsal_evj_961817 lsalevj mixed_tissue_mixed_st... 42 3.1 1
(FD521741) RUS04G11w HA Hordeum vulgare subsp. vulgare cDNA ... 42 3.1 1
(EX609440) 255366741 Pea aphid whole body normalized full le... 42 3.1 1
(EW480383) rova032_g21.y1 ova Sus scrofa cDNA 5', mRNA seque... 42 3.1 1
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete... 42 3.1 1
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 42 3.1 1
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 30 4.5 2
(CW952936) TcB38.4_E07_SP6 Tribolium BAC library Tribolium c... 38 4.7 2
(FP085483) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 5.8 2
(AC097108) Homo sapiens BAC clone RP11-745K4 from 4, complet... 32 5.8 2
(AC109822) Homo sapiens BAC clone RP11-633J12 from 2, comple... 32 5.8 2
(AC040996) Homo sapiens chromosome 4 clone RP11-347K3 map 4,... 32 5.8 2
(AC212676) Pongo abelii chromosome 12 clone CH276-320G5, WOR... 32 5.8 2
(AC026892) Homo sapiens chromosome 1 clone RP11-286E4, WORKI... 32 5.8 2
(AC155017) Bos taurus clone CH240-35A6, WORKING DRAFT SEQUEN... 32 5.9 2
(AC040890) Homo sapiens chromosome 1 clone RP11-362I13 map 1... 32 5.9 2
(AC187502) MACACA MULATTA BAC clone CH250-44H12 from chromos... 32 5.9 2
(AC221233) Bos taurus clone CH240-400G15, WORKING DRAFT SEQU... 32 5.9 2
(AL121757) Human DNA sequence from clone RP5-828H9 on chromo... 32 5.9 2
(AC098870) Homo sapiens BAC clone RP11-651C19 from 4, comple... 32 5.9 2
(AC018983) Homo sapiens clone RP11-28E11, WORKING DRAFT SEQU... 32 5.9 2
(AC175506) Bos taurus clone CH240-400H14, WORKING DRAFT SEQU... 30 5.9 2
(AC019001) Homo sapiens clone RP11-206H3, WORKING DRAFT SEQU... 32 5.9 2
(AL391869) Human DNA sequence from clone RP11-168C9 on chrom... 32 5.9 2
(AC145879) Pan troglodytes BAC clone RP43-20K4 from chromoso... 30 5.9 2
(AL445526) Human DNA sequence from clone RP11-32I2 on chromo... 32 6.0 2
(AC073081) Homo sapiens BAC clone RP11-310H21 from 2, comple... 32 6.0 2
(DJ051047) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 32 6.0 2
(DI106274) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 32 6.0 2
(CS083905) Sequence 88 from Patent WO2005040377. 32 6.0 2
(AC091062) Homo sapiens chromosome 17, clone RP11-506D12, co... 32 6.2 2
(AL161796) Human DNA sequence from clone RP11-487O23 on chro... 32 6.3 2
(CU914811) Zebrafish DNA sequence from clone CH1073-238A17 i... 30 6.4 2
(AC160343) Bos taurus clone CH240-94N22, WORKING DRAFT SEQUE... 40 7.5 2
(DJ051159) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 32 7.8 2
(DI107405) HIGH EFFICIENCY GENE TRANSFER AND EXPRESSION IN M... 32 7.8 2

>(BJ402219) Dictyostelium discoideum cDNA clone:dds20j21, 3' end,
single read.
Length = 100

Score = 56.0 bits (28), Expect = 2e-04
Identities = 28/28 (100%)
Strand = Plus / Minus


Query: 73 ttaataaatttatatatataatttatat 100
||||||||||||||||||||||||||||
Sbjct: 28 ttaataaatttatatatataatttatat 1

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 93,204,202
Number of extensions: 8031938
Number of successful extensions: 2901170
Number of sequences better than 10.0: 516
Length of query: 100
Length of database: 98,766,808,389
Length adjustment: 22
Effective length of query: 78
Effective length of database: 96,605,827,083
Effective search space: 7535254512474
Effective search space used: 7535254512474
X1: 11 (21.8 bits)
S2: 20 (40.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15405-1 (Contig-U15405-1Q) /CSM_Contig/Contig-U15405-1Q.Seq.d
(100 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 13,553,459
Number of extensions: 23853
Number of sequences better than 10.0: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 33
Length of database: 1,051,180,864
Length adjustment: 0
Effective length of query: 33
Effective length of database: 1,051,180,864
Effective search space: 0
Effective search space used: 0
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 24 (13.9 bits)

PSORT -
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0