Contig-U15388-1
Contig ID Contig-U15388-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15388-1 (Contig-U15388-1Q) /CSM_Contig/Contig-U15388-1Q.Seq.d
ACAGAATGAAAATAATAAGAAAAAATAAAAAAGATAAAGAAAGAAGAGAA
ATATATAAACAAGCAGAAAAAATGAAAAACATGTATAAAATGTTACGACG
TAATGAATTATTAGATCAAGAAACACGAAATTATTTTAATATGAAAGTAA
CAAGTAGTGAAAAAAATAGTTCAATCAGTAGAATAAAAAATCGATGTGTG
GAAACAGGCAGATCACGAGGAATAATAAGTGCATATAGAATATCACGTTT
ACGATTTAGAGAATATATGAAAATGGGATTAATAAGTGGAGTAAAAAAAA
TAAGTTATTAATGAAAAAATTACAAAACGTATTTGCAGCAATAAAAACAG
GCTTATTAGCAAAAGCGACAAGTGTAACCGTTATAGGATCAAAACGTGTA
TTTGAAATATTATCAAGATTTGAAAATGAAGGGCTAATTAGAGGATTTCA
AATAATAGATATAAGTAAAAATAAAGTAAGTATATATTTAAAATATAAAC
AAGATATGACAAGTTTATTATCAAAAATTAAAGTAGTATCTGTAAATAAA
GAAAAATTATATATAAAAGGAAAATTATTGAAAAAATTAAACACTGGAGT
AAATATGTATTTTGTAGAAAGTAAATTTGGTTTACAAACATTACCTCAAT
TAAAAATAAGAAATAAAAGGTTATATGCGCCATTAGGAGGTGAAATAAAA
TATATAGTTGAAATAAATAAAGTAAATCCAAAAATACAAGAACTAATAAA
AAAAAAACATGAAATATAGTCAAAATAAAAGTCTAAATACATTTGAAATA
GAATATAAAATAGCGAATAAATCGGTAAAAATAAAAAGTAGTGGAAAAAT
GGGAGTAATAACACAAAGAATTAAAATTAAAAGAACCCGCAATCCAATCA
AATAATATATATTATTTAAAAAATCATGGCAGATAGTAGAATAATAATAG
GAACAATGAAACAACAAATTCAAGGGGTATTATGCTGGTTTTTGTATTGA
ATTAAAATTAGTCGGATTAGGATTTGTTGTACATAAAGTCGGAAATACAT
TAGTACTAGATGTAGGATATAGTCATTATCGAAGTTGTTTAATTACCGAA
AAGCAGGTTGTAGTAAAATTAGAAGGATCACAAATCATCTTATATAGTAT
AAATAAAGAAAAAGTAACCACATTTGCAAGTTTATTAAAAACGTTTAAGA
AAATAAATATGTATAAAGGTACTGGAATATTAGGTATCAATGAAAAAATT
AAATTAAAAAAAGGAAAAGTGAAGATAAGATGGGAATAGTAATTGGAAAA
ATTGAATTAAATAATGAGAAGCAAATAATAGGAGAATTAAAGAAAAAAAT
TAAAGGAGTGAATTTTCATATTGCTCAAAAAGTAATAATGTTAAGTGGAA
ATGTCGCAAGTATAAAAGGAAACAAATTAATACAAAGTGAGGAAAAGCAA
ATAGTAGATATACTGCAAAGATTTAAAGGCTTATATTCACATAACTATGG
ATTAAAAGAAGAAGCATTAGCAAAAATAAGACGAATAGAAAATGTTTATA
GATATATTAGAGTAAGACAAGGATATCCTGTAAGAGGACGAACAAAAAGT
AATGCAAATACAGTAAAACGACAACGAAACGTAAGTACAGGTGTGAAAAC
AAAACGAAAAAAAATGTATTTATTAAAGGTAAACCAACAAATCGAAAAGA
GAGAAAAAT

Gap no gap
Contig length 1709
Chromosome number (1..6, M) M
Chromosome length 55569
Start point 43948
End point 45657
Strand (PLUS/MINUS) PLUS
Number of clones 15
Number of EST 14
Link to clone list U15388
List of clone(s)

est1=VSG525F,1,467
est2=VSG366F,246,799
est3=FC-IC1560E,740,1030
est4=VSG366Z,763,1196
est5=VSG771F,868,1352
est6=VSD545F,909,1164
est7=VSD545Z,909,1140
est8=VSB454Z,1009,1660
est9=SLH593E,1113,1325
est10=FC-IC0701F,1132,1599
est11=FC-IC0701Z,1132,1549
est12=FC-IC1621E,1132,1549
est13=VSD266E,1162,1709
est14=FCL-AC07F,1420,1638
Translated Amino Acid sequence
qnennkkk*kr*rkkrni*tsrknekhv*nvtt**iirsrntklf*yesnk**kk*fnq*
nkksmcgnrqitrnnkci*nitfti*RIYENGINKWSKKNKLLMKKLQNVFAAIKTGLLA
KATSVTVIGSKRVFEILSRFENEGLIRGFQIIDISKNKVSIYLKYKQDMTSLLSKIKVVS
VNKEKLYIKGKLLKKLNTGVNMYFVESKFGLQTLPQLKIRNKRLYAPLGGEIKYIVEINK
VNPKIQELIKKKHEI*sk*kskyi*nri*nse*igknkk*wkngsnntkn*n*knpqsnq
iiyii*kimadsriiigtmkqqiqgvlcwfly*ikisriricct*srkyistrcri*sls
klfnyrkagcskirritnhli*yk*rksnhickfiknv*enkyv*rywniryq*kn*ikk
rksedkmgivigkielnnekqiigelkkkikgvnfhiaqkvimlsgnvasikgnkliqse
ekqivdilqrfkglyshnyglkeealakirrienvyryirvrqgypvrgrtksnantvkr
qrnvstgvktkrkkmyllkvnqqiekrek


Translated Amino Acid sequence (All Frames)
Frame A:
te*k**ekikkikkeekyinkqkk*ktcikcydvmny*ikkheiili*k*qvvkkivqsv
e*kidvwkqadhee**vhieyhvydleni*kwd**ve*kk*vinekitkricsnknrlis
ksdkcnryriktci*niiki*k*ran*risnnryk*k*skyifki*trydkfiikn*ssi
ck*rkiiykrkiiekikhwskyvfcrk*iwftnitsiknkk*kvicairr*nkiys*nk*
skskntrtnkkkt*nivkikv*ihlk*nik*rinr*k*kvvekwe**hkelklkepaiqs
nniyylknhgr**nnnrnnettnsrgimlvfvln*n*sd*dllyikseih*y*m*divii
evv*lpksrl**n*kdhkssyiv*ikkk*phlqvy*krlrk*icikvley*vsmkkln*k
kek*r*dgnsnwkn*ik**eannrrikekn*rsefsycsksnnvkwkcrkykrkqintk*
gkansrytaki*rlift*lwikrrsisknktnrkcl*iy*sktrisckrtnkk*ckyskt
ttkrkyrcenktkknvfikgkptnrkerk


Frame B:
qnennkkk*kr*rkkrni*tsrknekhv*nvtt**iirsrntklf*yesnk**kk*fnq*
nkksmcgnrqitrnnkci*nitfti*RIYENGINKWSKKNKLLMKKLQNVFAAIKTGLLA
KATSVTVIGSKRVFEILSRFENEGLIRGFQIIDISKNKVSIYLKYKQDMTSLLSKIKVVS
VNKEKLYIKGKLLKKLNTGVNMYFVESKFGLQTLPQLKIRNKRLYAPLGGEIKYIVEINK
VNPKIQELIKKKHEI*sk*kskyi*nri*nse*igknkk*wkngsnntkn*n*knpqsnq
iiyii*kimadsriiigtmkqqiqgvlcwfly*ikisriricct*srkyistrcri*sls
klfnyrkagcskirritnhli*yk*rksnhickfiknv*enkyv*rywniryq*kn*ikk
rksedkmgivigkielnnekqiigelkkkikgvnfhiaqkvimlsgnvasikgnkliqse
ekqivdilqrfkglyshnyglkeealakirrienvyryirvrqgypvrgrtksnantvkr
qrnvstgvktkrkkmyllkvnqqiekrek


Frame C:
rmkiirknkkdkerreiykqaekmknmykmlrrnelldqetrnyfnmkvtsseknssisr
iknrcvetgrsrgiisayrisrlrfreymkmglisgvkkisy**knyktylqq*kqay*q
krqv*pl*dqnvylkyyqdlkmkg*ledfk**i*vkik*vyi*ninki*qvyyqklk*yl
*ikknyi*keny*kn*tle*icil*kvnlvykhyln*k*eikgymrh*evk*ni*lk*ik
*iqkykn**kknmkysqnkslntfeieykianksvkikssgkmgvitqrikikrtrnpik
*yilfkkswqive***eq*nnkfkgyyagfcielklvglgfvvhkvgntlvldvgyshyr
sclitekqvvvklegsqiilysinkekvttfasllktfkkinmykgtgilginekiklkk
gkvkirwe**lekln*imrsk**en*rkklke*ifillkk**c*vemsqv*ketn*ykvr
ksk**iyckdlkayihitmd*kkkh*qk*de*kmfidile*dkdil*edeqkvmqiq*nd
net*vqv*kqnekkciy*r*tnkskrekn


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15388-1 (Contig-U15388-1Q)
/CSM_Contig/Contig-U15388-1Q.Seq.d
(1709 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15388-1 (Contig-U15388-1Q) /CSM_Contig/Conti... 791 0.0
Contig-U04925-1 (Contig-U04925-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U15598-1 (Contig-U15598-1Q) /CSM_Contig/Conti... 40 0.011
Contig-U15442-1 (Contig-U15442-1Q) /CSM_Contig/Conti... 38 0.044
Contig-U14356-1 (Contig-U14356-1Q) /CSM_Contig/Conti... 38 0.044
Contig-U12134-1 (Contig-U12134-1Q) /CSM_Contig/Conti... 38 0.044
Contig-U09598-1 (Contig-U09598-1Q) /CSM_Contig/Conti... 38 0.044
Contig-U05266-1 (Contig-U05266-1Q) /CSM_Contig/Conti... 38 0.044
Contig-U15678-1 (Contig-U15678-1Q) /CSM_Contig/Conti... 36 0.17
Contig-U11869-1 (Contig-U11869-1Q) /CSM_Contig/Conti... 36 0.17

>Contig-U15388-1 (Contig-U15388-1Q) /CSM_Contig/Contig-U15388-1Q.Seq.d
Length = 1709

Score = 791 bits (399), Expect = 0.0
Identities = 429/444 (96%)
Strand = Plus / Plus


Query: 80 catgtataaaatgttacgacgtaatgaattattagatcaagaaacacgaaattattttaa 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 catgtataaaatgttacgacgtaatgaattattagatcaagaaacacgaaattattttaa 139


Query: 140 tatgaaagtaacaagtagtgnnnnnnntagttcaatcagtagaataaaaaatcgatgtgt 199
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 140 tatgaaagtaacaagtagtgaaaaaaatagttcaatcagtagaataaaaaatcgatgtgt 199


Query: 200 ggaaacaggcagatcacgaggaataataagtgcatatagaatatcacgtttacgatttag 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaaacaggcagatcacgaggaataataagtgcatatagaatatcacgtttacgatttag 259


Query: 260 agaatatatgaaaatgggattaataagtggagtnnnnnnnntaagttattaatgaaaaaa 319
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 260 agaatatatgaaaatgggattaataagtggagtaaaaaaaataagttattaatgaaaaaa 319


Query: 320 ttacaaaacgtatttgcagcaataaaaacaggcttattagcaaaagcgacaagtgtaacc 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttacaaaacgtatttgcagcaataaaaacaggcttattagcaaaagcgacaagtgtaacc 379


Query: 380 gttataggatcaaaacgtgtatttgaaatattatcaagatttgaaaatgaagggctaatt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gttataggatcaaaacgtgtatttgaaatattatcaagatttgaaaatgaagggctaatt 439


Query: 440 agaggatttcaaataatagatataagtaaaaataaagtaagtatatatttaaaatataaa 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaggatttcaaataatagatataagtaaaaataaagtaagtatatatttaaaatataaa 499


Query: 500 caagatatgacaagtttattatca 523
||||||||||||||||||||||||
Sbjct: 500 caagatatgacaagtttattatca 523


Score = 785 bits (396), Expect = 0.0
Identities = 426/441 (96%)
Strand = Plus / Plus


Query: 1269 gtgaagataagatgggaatagtaattggaaaaattgaattaaataatgagaagcaaataa 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 gtgaagataagatgggaatagtaattggaaaaattgaattaaataatgagaagcaaataa 1328


Query: 1329 taggagaattaaagnnnnnnnttaaaggagtgaattttcatattgctcaaaaagtaataa 1388
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 taggagaattaaagaaaaaaattaaaggagtgaattttcatattgctcaaaaagtaataa 1388


Query: 1389 tgttaagtggaaatgtcgcaagtataaaaggaaacaaattaatacaaagtgaggaaaagc 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 tgttaagtggaaatgtcgcaagtataaaaggaaacaaattaatacaaagtgaggaaaagc 1448


Query: 1449 aaatagtagatatactgcaaagatttaaaggcttatattcacataactatggattaaaag 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 aaatagtagatatactgcaaagatttaaaggcttatattcacataactatggattaaaag 1508


Query: 1509 aagaagcattagcaaaaataagacgaatagaaaatgtttatagatatattagagtaagac 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 aagaagcattagcaaaaataagacgaatagaaaatgtttatagatatattagagtaagac 1568


Query: 1569 aaggatatcctgtaagaggacgaacaaaaagtaatgcaaatacagtaaaacgacaacgaa 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1569 aaggatatcctgtaagaggacgaacaaaaagtaatgcaaatacagtaaaacgacaacgaa 1628


Query: 1629 acgtaagtacaggtgtgaaaacaaaacgnnnnnnnntgtatttattaaaggtaaaccaac 1688
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1629 acgtaagtacaggtgtgaaaacaaaacgaaaaaaaatgtatttattaaaggtaaaccaac 1688


Query: 1689 aaatcgaaaagagagaaaaat 1709
|||||||||||||||||||||
Sbjct: 1689 aaatcgaaaagagagaaaaat 1709


Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus


Query: 883 gaacccgcaatccaatcaaataatatatattatttaaaaaatcatggcagatagtagaat 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gaacccgcaatccaatcaaataatatatattatttaaaaaatcatggcagatagtagaat 942


Query: 943 aataataggaacaatgaaacaacaaattcaaggggtattatgctggtttttgtattgaat 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 aataataggaacaatgaaacaacaaattcaaggggtattatgctggtttttgtattgaat 1002


Query: 1003 taaaattagtcggattaggatttgttgtacataaagtcggaaatacattagtactagatg 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 taaaattagtcggattaggatttgttgtacataaagtcggaaatacattagtactagatg 1062


Query: 1063 taggatatagtcattatcgaagttgtttaattaccgaaaagcaggttgtagtaaaattag 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 taggatatagtcattatcgaagttgtttaattaccgaaaagcaggttgtagtaaaattag 1122


Query: 1123 aaggatcacaaatcatcttatatagtataaataaagaaaaagtaaccacatttgcaagtt 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 aaggatcacaaatcatcttatatagtataaataaagaaaaagtaaccacatttgcaagtt 1182


Query: 1183 tattaaaaacgtttaagaaaataaatatgtataaaggtactggaatattaggtatcaatg 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 tattaaaaacgtttaagaaaataaatatgtataaaggtactggaatattaggtatcaatg 1242


Score = 204 bits (103), Expect = 3e-52
Identities = 103/103 (100%)
Strand = Plus / Plus


Query: 588 taaacactggagtaaatatgtattttgtagaaagtaaatttggtttacaaacattacctc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 taaacactggagtaaatatgtattttgtagaaagtaaatttggtttacaaacattacctc 647


Query: 648 aattaaaaataagaaataaaaggttatatgcgccattaggagg 690
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aattaaaaataagaaataaaaggttatatgcgccattaggagg 690


Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus


Query: 758 catgaaatatagtcaaaataaaagtctaaatacatt 793
||||||||||||||||||||||||||||||||||||
Sbjct: 758 catgaaatatagtcaaaataaaagtctaaatacatt 793


Score = 36.2 bits (18), Expect = 0.17
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 900 aaataatatatattattt 917
||||||||||||||||||
Sbjct: 917 aaataatatatattattt 900


>Contig-U04925-1 (Contig-U04925-1Q) /CSM_Contig/Contig-U04925-1Q.Seq.d
Length = 871

Score = 42.1 bits (21), Expect = 0.003
Identities = 30/33 (90%)
Strand = Plus / Minus


Query: 895 caatcaaataatatatattatttaaaaaatcat 927
||||| |||||| || |||||||||||||||||
Sbjct: 644 caatccaataatctaaattatttaaaaaatcat 612


>Contig-U15598-1 (Contig-U15598-1Q) /CSM_Contig/Contig-U15598-1Q.Seq.d
Length = 2503

Score = 40.1 bits (20), Expect = 0.011
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 940 aataataataggaacaatga 959
||||||||||||||||||||
Sbjct: 2167 aataataataggaacaatga 2186


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,894
Number of Sequences: 8402
Number of extensions: 28894
Number of successful extensions: 3180
Number of sequences better than 10.0: 110
length of query: 1709
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1693
effective length of database: 7,941,110
effective search space: 13444299230
effective search space used: 13444299230
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1.25
Homology vs DNA
Query= Contig-U15388-1 (Contig-U15388-1Q) /CSM_Contig/Contig-U15388-1Q.Seq.d
(1709 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(D63523) Dictyostelium discoideum mitochondrial rpl16, rpl14... 609 0.0 11
(AB000109) Dictyostelium discoideum mitochondrial DNA, compl... 609 0.0 11
(AU262024) Dictyostelium discoideum vegetative cDNA clone:VS... 609 0.0 3
(DQ336395) Dictyostelium citrinum mitochondrion, complete ge... 182 0.0 11
(AU263745) Dictyostelium discoideum vegetative cDNA clone:VS... 603 0.0 3
(AU263744) Dictyostelium discoideum vegetative cDNA clone:VS... 603 0.0 2
(AU266595) Dictyostelium discoideum vegetative cDNA clone:VS... 295 e-179 3
(AU266799) Dictyostelium discoideum vegetative cDNA clone:VS... 274 e-176 4
(AU275134) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 569 e-162 2
(AU275133) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 569 e-162 2
(AU271783) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 561 e-155 1
(AU271784) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 468 e-133 2
(AU266370) Dictyostelium discoideum vegetative cDNA clone:VS... 295 e-128 3
(AU266371) Dictyostelium discoideum vegetative cDNA clone:VS... 208 e-118 4
(AU264213) Dictyostelium discoideum vegetative cDNA clone:VS... 371 e-113 2
(AU264214) Dictyostelium discoideum vegetative cDNA clone:VS... 283 e-105 3
(AU039342) Dictyostelium discoideum slug cDNA, clone SLH593. 258 6e-64 1
(AU275081) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 103 6e-62 3
(AU275080) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 103 6e-62 3
(AU285047) Dictyostelium discoideum gamete cDNA clone:FCL-AC... 186 2e-44 2
(AM468381) Vitis vinifera contig VV78X246012.6, whole genome... 52 0.070 1
(CU822718) A BAC library has been constructed from PN40024 g... 52 0.070 1
(AL359951) Human chromosome 14 DNA sequence BAC R-196A3 of l... 38 0.15 6
(AC020685) Homo sapiens chromosome 15 clone RP11-414J1 map 1... 40 0.17 4
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 38 0.21 15
(AL935172) Mouse DNA sequence from clone RP23-261J24 on chro... 50 0.28 1
(AC012293) Mus musculus chromosome 11 clone RP23-457K24 map ... 50 0.28 1
(CR066361) Forward strand read from insert in 3'HPRT inserti... 50 0.28 1
(CR029076) Forward strand read from insert in 3'HPRT inserti... 50 0.28 1
(EJ386062) 1092963812692 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.37 3
(AC213540) Populus trichocarpa clone POP053-A08, complete se... 40 0.52 7
(AY700145) Polysphondylium pallidum mitochondrion DNA, compl... 34 0.64 2
(AC149575) Populus trichocarpa clone Pop1-41G18, complete se... 36 0.73 6
(AC187861) Populus trichocarpa clone Pop1-1A4, complete sequ... 48 1.1 1
(AC222199) Bos taurus clone CH240-411P21, WORKING DRAFT SEQU... 48 1.1 1
(AC219539) Bos taurus clone CH240-330H4, WORKING DRAFT SEQUE... 48 1.1 1
(DX525550) GH_MBb0069B17r GH_MBb Gossypium hirsutum genomic ... 48 1.1 1
(DR123015) 49215416 Drosophila pseudoobscura embryonic cDNA ... 48 1.1 1
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 48 1.1 1
(BX571943) Zebrafish DNA sequence from clone DKEY-159C24 in ... 40 1.1 10
(EJ490636) 1095403534375 Global-Ocean-Sampling_GS-28-01-01-1... 34 1.3 3
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 40 1.5 14
(EJ371445) 1092963725759 Global-Ocean-Sampling_GS-28-01-01-1... 36 1.7 3
(AC179707) Strongylocentrotus purpuratus clone R3-1021I1, WO... 38 1.7 6
(EK163235) 1095458040588 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.8 3
(CZ969030) 169133 Tomato MboI BAC Library Solanum lycopersic... 44 2.1 2
(AP006428) Lotus japonicus genomic DNA, chromosome 5, clone:... 36 2.2 2
(CU062504) Zebrafish DNA sequence from clone CH73-373E20 in ... 42 2.4 5
(CL025676) CH216-22A7_RM1.1 CH216 Xenopus (Silurana) tropica... 34 2.5 3
(AC155290) Medicago truncatula chromosome 6 clone mth2-106k1... 44 2.6 2
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 32 3.0 10
(AQ942440) Sheared DNA-45G11.TF Sheared DNA Trypanosoma bruc... 34 3.0 2
(AM460843) Vitis vinifera contig VV78X208558.3, whole genome... 44 3.2 2
(DV789578) Hw_liver_53_050812_A02 Bos taurus CF-24-HW liver ... 38 3.3 3
(EI380035) POTDD36TF Solanum tuberosum RHPOTKEY BAC ends Sol... 40 3.4 3
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 40 3.6 12
(AM479581) Vitis vinifera, whole genome shotgun sequence, co... 36 3.7 4
(AC200080) Macaca mulatta clone CH250-216F15, WORKING DRAFT ... 36 3.7 6
(AC069026) Homo sapiens chromosome 10 clone RP11-561F6, comp... 46 3.8 6
(AX392737) Sequence 27 from Patent WO0212526. 42 3.8 4
(AR707084) Sequence 27 from patent US 6933145. 42 3.8 4
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 32 3.9 12
(CT010515) M.truncatula DNA sequence from clone MTH2-146B21 ... 40 4.0 6
(AC110071) Homo sapiens chromosome UNK clone RP13-875O11, WO... 36 4.1 6
(AE001423) Plasmodium falciparum 3D7 chromosome 2 section 60... 34 4.2 5
(CU638869) Zebrafish DNA sequence from clone CH73-369D14 in ... 46 4.3 1
(CR762424) Zebrafish DNA sequence from clone RP71-52E8 in li... 46 4.3 1
(BX005351) Zebrafish DNA sequence from clone CH211-266A16 in... 46 4.3 1
(BX004885) Zebrafish DNA sequence from clone CH211-103L6. 46 4.3 1
(AL928723) Zebrafish DNA sequence from clone DKEY-252I9 in l... 46 4.3 1
(AM481403) Vitis vinifera contig VV78X216982.3, whole genome... 46 4.3 1
(AM448189) Vitis vinifera contig VV78X242969.8, whole genome... 46 4.3 1
(Z12017) Caenorhabditis elegans Cosmid R08D7. 46 4.3 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 46 4.3 1
(AC105264) Drosophila melanogaster 3L BAC RP98-17K18 (Roswel... 46 4.3 1
(AC010038) Drosophila melanogaster 3L BAC RP98-14O14 (Roswel... 46 4.3 1
(AC005557) Drosophila melanogaster, chromosome 3L, region 62... 46 4.3 1
(AL646103) Human DNA sequence from clone RP11-165L6 on chrom... 46 4.3 1
(AC107463) Homo sapiens BAC clone RP11-553P9 from 4, complet... 46 4.3 1
(AC027094) Homo sapiens chromosome 10 clone RP11-528F18 map ... 46 4.3 1
(CR925701) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 4.3 1
(AL391377) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 4.3 1
(AC231012) Bos taurus clone CH240-493O21, WORKING DRAFT SEQU... 46 4.3 1
(AC180297) Strongylocentrotus purpuratus clone R3-3119J08, W... 46 4.3 1
(AC177242) Strongylocentrotus purpuratus clone R3-43B10, WOR... 46 4.3 1
(AC175987) Strongylocentrotus purpuratus clone R3-17I20, WOR... 46 4.3 1
(AC012911) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 46 4.3 1
(BH022574) GH_MBb0003E08f Gossypium hirsutum L. Gossypium hi... 46 4.3 1
(ET426332) S0263H24_SP6 CHORI-214 Salmo salar genomic clone ... 46 4.3 1
(ET372015) S0041M08_SP6 CHORI-214 Salmo salar genomic clone ... 46 4.3 1
(ER829126) PPTBG84TR Solanum tuberosum RHPOTKEY BAC ends Sol... 46 4.3 1
(EI513485) MUGQ_CH252P232J23Sp6_CN404_088 CHORI-252 Vervet M... 46 4.3 1
(ED858457) OA_CBa0004A21.r OA_CBa Oryza australiensis genomi... 46 4.3 1
(DX554945) GH_MBb0039H13r GH_MBb Gossypium hirsutum genomic ... 46 4.3 1
(DU869700) 95559 Tomato HindIII BAC Library Solanum lycopers... 46 4.3 1
(CR345398) mte1-79K12RM1 BAC end, cultivar Jemalong A17 of M... 46 4.3 1
(EC824623) SME00002378 esmbsro2 Sawyeria marylandensis cDNA,... 46 4.3 1
(EC822894) SME00003631 esmbsro2 Sawyeria marylandensis cDNA,... 46 4.3 1
(BF296113) 031PbE02 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 46 4.3 1
(EX108066) BR094356 whole plant cDNA library KFYP Brassica r... 46 4.3 1
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 32 5.5 12
(CC818537) 1O0004N16R Oxytricha plasmid UUGC1O library Sterk... 34 5.5 3
(FH941730) CHO_OF6729xl08f1.ab1 CHO_OF6 Nicotiana tabacum ge... 40 5.7 2
(EJ315779) 1095403285970 Global-Ocean-Sampling_GS-27-01-01-1... 38 5.7 2
(AC022969) Homo sapiens chromosome 14 clone RP11-422L13 map ... 40 5.9 6
(AZ670688) ENTGU43TF Entamoeba histolytica Sheared DNA Entam... 42 6.6 2
(AC174889) Bos taurus clone CH240-14L7, *** SEQUENCING IN PR... 34 7.9 2
(AC169293) Bos taurus clone CH240-240F13, WORKING DRAFT SEQU... 34 8.0 2
(AC004809) Arabidopsis thaliana chromosome 1 BAC F13M7 seque... 34 8.3 2
(AL031771) Human DNA sequence from clone RP1-217O16 on chrom... 32 8.3 2
(BD452709) Diagnosis of Diseases Associated with tumor suppr... 34 8.3 5
(AX251188) Sequence 156 from Patent WO0168912. 34 8.3 5
(EU275727) Dictyostelium fasciculatum strain SH3 mitochondri... 34 9.3 8
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18... 34 9.7 11

>(D63523) Dictyostelium discoideum mitochondrial rpl16, rpl14, ORF188,
rps14, rps8, rpl6, rps13, ORF127, ORF796 genes, complete
and partial cds.
Length = 5687

Score = 609 bits (307), Expect(11) = 0.0
Identities = 307/307 (100%)
Strand = Plus / Plus


Query: 1350 ttaaaggagtgaattttcatattgctcaaaaagtaataatgttaagtggaaatgtcgcaa 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2732 ttaaaggagtgaattttcatattgctcaaaaagtaataatgttaagtggaaatgtcgcaa 2791


Query: 1410 gtataaaaggaaacaaattaatacaaagtgaggaaaagcaaatagtagatatactgcaaa 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2792 gtataaaaggaaacaaattaatacaaagtgaggaaaagcaaatagtagatatactgcaaa 2851


Query: 1470 gatttaaaggcttatattcacataactatggattaaaagaagaagcattagcaaaaataa 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2852 gatttaaaggcttatattcacataactatggattaaaagaagaagcattagcaaaaataa 2911


Query: 1530 gacgaatagaaaatgtttatagatatattagagtaagacaaggatatcctgtaagaggac 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2912 gacgaatagaaaatgtttatagatatattagagtaagacaaggatatcctgtaagaggac 2971


Query: 1590 gaacaaaaagtaatgcaaatacagtaaaacgacaacgaaacgtaagtacaggtgtgaaaa 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2972 gaacaaaaagtaatgcaaatacagtaaaacgacaacgaaacgtaagtacaggtgtgaaaa 3031


Query: 1650 caaaacg 1656
|||||||
Sbjct: 3032 caaaacg 3038

Score = 295 bits (149), Expect(11) = 0.0
Identities = 149/149 (100%)
Strand = Plus / Plus


Query: 301 taagttattaatgaaaaaattacaaaacgtatttgcagcaataaaaacaggcttattagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1690 taagttattaatgaaaaaattacaaaacgtatttgcagcaataaaaacaggcttattagc 1749


Query: 361 aaaagcgacaagtgtaaccgttataggatcaaaacgtgtatttgaaatattatcaagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1750 aaaagcgacaagtgtaaccgttataggatcaaaacgtgtatttgaaatattatcaagatt 1809


Query: 421 tgaaaatgaagggctaattagaggatttc 449
|||||||||||||||||||||||||||||
Sbjct: 1810 tgaaaatgaagggctaattagaggatttc 1838

Score = 274 bits (138), Expect(11) = 0.0
Identities = 138/138 (100%)
Strand = Plus / Plus


Query: 1105 aggttgtagtaaaattagaaggatcacaaatcatcttatatagtataaataaagaaaaag 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 aggttgtagtaaaattagaaggatcacaaatcatcttatatagtataaataaagaaaaag 2547


Query: 1165 taaccacatttgcaagtttattaaaaacgtttaagaaaataaatatgtataaaggtactg 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 taaccacatttgcaagtttattaaaaacgtttaagaaaataaatatgtataaaggtactg 2607


Query: 1225 gaatattaggtatcaatg 1242
||||||||||||||||||
Sbjct: 2608 gaatattaggtatcaatg 2625

Score = 250 bits (126), Expect(11) = 0.0
Identities = 126/126 (100%)
Strand = Plus / Plus


Query: 167 tagttcaatcagtagaataaaaaatcgatgtgtggaaacaggcagatcacgaggaataat 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1556 tagttcaatcagtagaataaaaaatcgatgtgtggaaacaggcagatcacgaggaataat 1615


Query: 227 aagtgcatatagaatatcacgtttacgatttagagaatatatgaaaatgggattaataag 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1616 aagtgcatatagaatatcacgtttacgatttagagaatatatgaaaatgggattaataag 1675


Query: 287 tggagt 292
||||||
Sbjct: 1676 tggagt 1681

Score = 220 bits (111), Expect(11) = 0.0
Identities = 111/111 (100%)
Strand = Plus / Plus


Query: 984 gctggtttttgtattgaattaaaattagtcggattaggatttgttgtacataaagtcgga 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2370 gctggtttttgtattgaattaaaattagtcggattaggatttgttgtacataaagtcgga 2429


Query: 1044 aatacattagtactagatgtaggatatagtcattatcgaagttgtttaatt 1094
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2430 aatacattagtactagatgtaggatatagtcattatcgaagttgtttaatt 2480

Score = 200 bits (101), Expect(11) = 0.0
Identities = 101/101 (100%)
Strand = Plus / Plus


Query: 592 cactggagtaaatatgtattttgtagaaagtaaatttggtttacaaacattacctcaatt 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 cactggagtaaatatgtattttgtagaaagtaaatttggtttacaaacattacctcaatt 2040


Query: 652 aaaaataagaaataaaaggttatatgcgccattaggaggtg 692
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 aaaaataagaaataaaaggttatatgcgccattaggaggtg 2081

Score = 137 bits (69), Expect(11) = 0.0
Identities = 69/69 (100%)
Strand = Plus / Plus


Query: 91 tgttacgacgtaatgaattattagatcaagaaacacgaaattattttaatatgaaagtaa 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 tgttacgacgtaatgaattattagatcaagaaacacgaaattattttaatatgaaagtaa 1539


Query: 151 caagtagtg 159
|||||||||
Sbjct: 1540 caagtagtg 1548

Score = 103 bits (52), Expect(11) = 0.0
Identities = 52/52 (100%)
Strand = Plus / Plus


Query: 931 agatagtagaataataataggaacaatgaaacaacaaattcaaggggtatta 982
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2318 agatagtagaataataataggaacaatgaaacaacaaattcaaggggtatta 2369

Score = 93.7 bits (47), Expect(11) = 0.0
Identities = 47/47 (100%)
Strand = Plus / Plus


Query: 883 gaacccgcaatccaatcaaataatatatattatttaaaaaatcatgg 929
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2271 gaacccgcaatccaatcaaataatatatattatttaaaaaatcatgg 2317

Score = 63.9 bits (32), Expect(11) = 0.0
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 1678 ggtaaaccaacaaatcgaaaagagagaaaaat 1709
||||||||||||||||||||||||||||||||
Sbjct: 3061 ggtaaaccaacaaatcgaaaagagagaaaaat 3092

Score = 26.3 bits (13), Expect(11) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 1665 tgtatttattaaa 1677
|||||||||||||
Sbjct: 3047 tgtatttattaaa 3059

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,603,664,990
Number of extensions: 103079577
Number of successful extensions: 9168565
Number of sequences better than 10.0: 115
Length of query: 1709
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1685
Effective length of database: 96,409,374,237
Effective search space: 162449795589345
Effective search space used: 162449795589345
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15388-1 (Contig-U15388-1Q) /CSM_Contig/Contig-U15388-1Q.Seq.d
(1709 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(O21038) RecName: Full=Ribosomal protein S13, mitochondrial; &A... 258 5e-67
(O21035) RecName: Full=Ribosomal protein S14, mitochondrial; &A... 199 3e-49
(Q2LCP0) RecName: Full=Ribosomal protein S8, mitochondrial; &DQ... 197 8e-49
EU275726_37(EU275726|pid:none) Polysphondylium pallidum strain P... 113 2e-23
EU275727_38(EU275727|pid:none) Dictyostelium fasciculatum strain... 111 7e-23
EU275726_39(EU275726|pid:none) Polysphondylium pallidum strain P... 89 5e-16
EU275726_40(EU275726|pid:none) Polysphondylium pallidum strain P... 86 5e-15
AY700145_20(AY700145|pid:none) Polysphondylium pallidum mitochon... 83 3e-14
EU275727_39(EU275727|pid:none) Dictyostelium fasciculatum strain... 81 1e-13
EF145939_1(EF145939|pid:none) Populus trichocarpa clone WS0114_H... 81 1e-13
AY700145_22(AY700145|pid:none) Polysphondylium pallidum mitochon... 79 4e-13
AJ539160_2(AJ539160|pid:none) Triticum aestivum sdh2-rps14 gene.... 74 2e-11
(P46752) RecName: Full=Ribosomal protein S14, mitochondrial; &T... 73 3e-11
AJ012374_2(AJ012374|pid:none) Zea mays nuclear sdh2-rps14 gene. ... 73 3e-11
AF494279_14(AF494279|pid:none) Chaetosphaeridium globosum mitoch... 72 6e-11
BT067061_1(BT067061|pid:none) Zea mays full-length cDNA clone ZM... 72 6e-11
(P05716) RecName: Full=Ribosomal protein S14, mitochondrial; &R... 70 2e-10
R3OB4B(S07889;S20239;S78219)ribosomal protein S14 - evening prim... 70 2e-10
AB017427_1(AB017427|pid:none) Oryza sativa Japonica Group mRNA f... 69 4e-10
AY267353_8(AY267353|pid:none) Chara vulgaris mitochondrion, comp... 69 5e-10
AJ132231_2(AJ132231|pid:none) Pisum sativum mitochondrial rpl5, ... 69 5e-10
DQ380465_1(DQ380465|pid:none) Typha latifolia ribosomal protein ... 69 7e-10
AJ131180_1(AJ131180|pid:none) Arabidopsis thaliana rps14 gene. ... 68 9e-10
DQ380466_1(DQ380466|pid:none) Guzmania lingulata ribosomal prote... 68 1e-09
AY500368_37(AY500368|pid:none) Dictyota dichotoma mitochondrion,... 68 1e-09
DQ380467_1(DQ380467|pid:none) Juncus effusus ribosomal protein S... 68 1e-09
AF295546_7(AF295546|pid:none) Malawimonas jakobiformis mitochond... 67 2e-09
DQ380508_1(DQ380508|pid:none) Carex hachijoensis mitochondrial r... 67 3e-09
DQ832718_38(DQ832718|pid:none) Phytophthora ramorum mitochondrio... 67 3e-09
AY500367_35(AY500367|pid:none) Desmarestia viridis mitochondrion... 67 3e-09
FM179380_35(FM179380|pid:none) Vitis vinifera complete mitochond... 67 3e-09
DQ380472_1(DQ380472|pid:none) Flagellaria indica ribosomal prote... 66 3e-09
EU275727_40(EU275727|pid:none) Dictyostelium fasciculatum strain... 66 3e-09
EU431224_32(EU431224|pid:none) Carica papaya mitochondrion, comp... 66 4e-09
AY534144_23(AY534144|pid:none) Saprolegnia ferax strain ATCC 360... 65 6e-09
CR954200_8(CR954200|pid:none) Ostreococcus tauri mitochondrion, ... 65 8e-09
DQ380505_1(DQ380505|pid:none) Poa saltuensis subsp. languida mit... 63 4e-08
(P26873) RecName: Full=Ribosomal protein S14, mitochondrial; &M... 61 1e-07
CU928170_780(CU928170|pid:none) Kluyveromyces thermotolerans str... 61 1e-07
X07236_1(X07236|pid:none) Vicia faba F-0-ATPase9 gene and nontra... 61 1e-07
AP007171_435(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 60 2e-07
AB251495_38(AB251495|pid:none) Physcomitrella patens mitochondri... 60 3e-07
CU633899_32(CU633899|pid:none) Podospora anserina genomic DNA ch... 59 4e-07
CU928176_52(CU928176|pid:none) Zygosaccharomyces rouxii strain C... 59 5e-07
CP000496_1017(CP000496|pid:none) Pichia stipitis CBS 6054 chromo... 59 5e-07
BT029408_1(BT029408|pid:none) Drosophila melanogaster IP02459 fu... 59 7e-07
AE014298_2970(AE014298|pid:none) Drosophila melanogaster chromos... 59 7e-07
(Q2N9C4) RecName: Full=30S ribosomal protein S14; &CP000157_162... 59 7e-07
AJ550052_1(AJ550052|pid:none) Ectocarpus siliculosus mitochondri... 58 9e-07
(Q134U2) RecName: Full=30S ribosomal protein S14; &CP000283_315... 58 9e-07
AM270135_14(AM270135|pid:none) Aspergillus niger contig An07c018... 58 9e-07
CR380955_362(CR380955|pid:none) Candida glabrata strain CBS138 c... 58 1e-06
(Q821V2) RecName: Full=30S ribosomal protein S14; &AE015925_821... 57 2e-06
(P24354) RecName: Full=Plastid 30S ribosomal protein S14; &AJ29... 57 2e-06
CP001280_554(CP001280|pid:none) Methylocella silvestris BL2, com... 57 2e-06
(Q5NQ52) RecName: Full=30S ribosomal protein S14; &AE008692_529... 57 2e-06
FM992692_486(FM992692|pid:none) Candida dubliniensis CD36 chromo... 57 2e-06
(B6IRR9) RecName: Full=30S ribosomal protein S14; &CP000613_702... 57 3e-06
DQ443266_1(DQ443266|pid:none) Bombyx mori mitochondrial 28S ribo... 57 3e-06
AJ550051_1(AJ550051|pid:none) Ectocarpus siliculosus mitochondri... 57 3e-06
(Q8A489) RecName: Full=30S ribosomal protein S14; &AE015928_271... 56 4e-06
(Q07KN1) RecName: Full=30S ribosomal protein S14; &CP000463_354... 56 4e-06
CP001029_2117(CP001029|pid:none) Methylobacterium populi BJ001, ... 56 5e-06
(Q03PX2) RecName: Full=50S ribosomal protein L6; &CP000416_1573... 56 5e-06
(P10663) RecName: Full=37S ribosomal protein MRP2, mitochondrial... 56 5e-06
(Q1H4M4) RecName: Full=30S ribosomal protein S14; &CP000284_292... 56 5e-06
(Q255T5) RecName: Full=30S ribosomal protein S14; &(Q5L550) Rec... 56 5e-06
(Q2IXP7) RecName: Full=30S ribosomal protein S14; &CP000250_230... 56 5e-06
(Q47J90) RecName: Full=30S ribosomal protein S14; &CP000089_332... 56 5e-06
(Q9CR88) RecName: Full=28S ribosomal protein S14, mitochondrial;... 55 6e-06
AP008981_1057(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 55 8e-06
(Q4UMR6) RecName: Full=30S ribosomal protein S14; &CP000053_291... 55 8e-06
(Q2G8W7) RecName: Full=30S ribosomal protein S14; &CP000248_125... 55 8e-06
(Q9Z6W9) RecName: Full=30S ribosomal protein S14; &AE001363_917... 55 8e-06
AP009381_10(AP009381|pid:none) Cycas taitungensis mitochondrial ... 55 8e-06
FN392319_401(FN392319|pid:none) Pichia pastoris GS115 chromosome... 55 1e-05
(Q211G1) RecName: Full=30S ribosomal protein S14; &CP000301_339... 55 1e-05
(Q68W91) RecName: Full=30S ribosomal protein S14; &AE017197_611... 55 1e-05
(Q5L8C2) RecName: Full=30S ribosomal protein S14; &(Q64NM1) Rec... 55 1e-05
(A5CCJ9) RecName: Full=30S ribosomal protein S14; &AM494475_363... 55 1e-05
(A0T0B3) RecName: Full=30S ribosomal protein S14, chloroplastic;... 54 1e-05
(A6KYI2) RecName: Full=30S ribosomal protein S14; &CP000139_766... 54 1e-05
CP000683_721(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 54 1e-05
(P57578) RecName: Full=30S ribosomal protein S14; &BA000003_476... 54 2e-05
(Q92QF7) RecName: Full=30S ribosomal protein S14; &AL591688_137... 54 2e-05
DQ214954_1(DQ214954|pid:none) Taeniopygia guttata clone 0061P001... 54 2e-05
(A8F2D4) RecName: Full=30S ribosomal protein S14; &(A8GT56) Rec... 54 2e-05
AM920427_1624(AM920427|pid:none) Penicillium chrysogenum Wiscons... 54 2e-05
(Q9HF53) RecName: Full=40S ribosomal protein MRP2, mitochondrial... 54 2e-05
(A5V5Y9) RecName: Full=30S ribosomal protein S14; &CP000699_133... 54 2e-05
CP000685_382(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 53 3e-05
(Q3YRM2) RecName: Full=30S ribosomal protein S14; &CP000107_582... 53 3e-05
CP001096_3591(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 53 3e-05
(A8EZK3) RecName: Full=30S ribosomal protein S14; &CP000409_833... 53 3e-05
(A9CIG1) RecName: Full=30S ribosomal protein S14; &AC2814(AC281... 53 4e-05
(Q2JLR9) RecName: Full=30S ribosomal protein S14; &CP000240_133... 53 4e-05
(Q10ZE2) RecName: Full=30S ribosomal protein S14; &CP000393_285... 53 4e-05
(O84792) RecName: Full=30S ribosomal protein S14; &(Q3KKQ5) Rec... 53 4e-05
(Q6N4U6) RecName: Full=30S ribosomal protein S14; AltName: Full=... 53 4e-05
AK311759_1(AK311759|pid:none) Homo sapiens cDNA, FLJ92019, highl... 53 4e-05
(Q489A0) RecName: Full=30S ribosomal protein S14; &CP000083_582... 53 4e-05
(Q2GH43) RecName: Full=30S ribosomal protein S14; &CP000236_405... 52 5e-05
CP001615_1609(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 52 5e-05
(B6YQ72) RecName: Full=30S ribosomal protein S14; &AP010656_81(... 52 5e-05
(Q2EEX3) RecName: Full=Plastid 30S ribosomal protein S14; &DQ39... 52 5e-05
(A7HWS4) RecName: Full=30S ribosomal protein S14; &CP000774_273... 52 5e-05
CP000633_1364(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 52 5e-05
(A5ELL4) RecName: Full=30S ribosomal protein S14; &CP000494_475... 52 5e-05
(Q5WAR0) RecName: Full=30S ribosomal protein S14; &AP006627_400... 52 5e-05
FM954972_2651(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 52 7e-05
(A0M585) RecName: Full=30S ribosomal protein S14; &CU207366_278... 52 7e-05
AL954747_416(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 52 7e-05
(Q6GH70) RecName: Full=30S ribosomal protein S14; &BX571856_131... 52 7e-05
(A5D5G9) RecName: Full=50S ribosomal protein L6; &AP009389_334(... 52 7e-05
(A6U872) RecName: Full=30S ribosomal protein S14; &CP000738_992... 52 7e-05
(O42859) RecName: Full=Probable 40S ribosomal protein mrp2, mito... 52 7e-05
(A5EX86) RecName: Full=30S ribosomal protein S14; &CP000513_119... 52 7e-05
(Q38US6) RecName: Full=50S ribosomal protein L6; &CR936503_1752... 52 9e-05
(Q4L645) RecName: Full=30S ribosomal protein S14; &AP006716_157... 52 9e-05
EU168191_45(EU168191|pid:none) Heterosigma akashiwo strain CCMP ... 52 9e-05
CP001102_164(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 52 9e-05
CP000813_117(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 52 9e-05
(Q1MIC8) RecName: Full=30S ribosomal protein S14; &AM236080_179... 52 9e-05
(Q8EL00) RecName: Full=30S ribosomal protein S14; &BA000028_343... 52 9e-05
(Q5FFV3) RecName: Full=30S ribosomal protein S14; &CR925677_616... 51 1e-04
(A3N370) RecName: Full=30S ribosomal protein S14; &CP000569_174... 51 1e-04
BT057075_1(BT057075|pid:none) Salmo salar clone ssal-eve-502-309... 51 1e-04
(B6EPT8) RecName: Full=30S ribosomal protein S14; &FM178379_333... 51 1e-04
EU924195_1(EU924195|pid:none) Eschscholzia californica ribosomal... 51 1e-04
BT073908_1(BT073908|pid:none) Oncorhynchus mykiss clone omyk-evo... 51 1e-04
(A6GZ86) RecName: Full=30S ribosomal protein S14; &AM398681_129... 51 1e-04
(B1YGW5) RecName: Full=50S ribosomal protein L6; &CP001022_110(... 51 1e-04
AP009608_807(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 51 1e-04
(Q65M53) RecName: Full=30S ribosomal protein S14; &AE017333_870... 51 1e-04
(Q5HAT5) RecName: Full=30S ribosomal protein S14; &CR767821_618... 51 1e-04
CP000764_117(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 51 1e-04
CP000687_1752(CP000687|pid:none) Actinobacillus pleuropneumoniae... 51 1e-04
FJ858268_5(FJ858268|pid:none) Micromonas pusilla CCMP1545 mitoch... 51 1e-04
(A8Z681) RecName: Full=50S ribosomal protein L6; &CP000770_198(... 51 1e-04
CP001186_119(CP001186|pid:none) Bacillus cereus G9842, complete ... 51 1e-04
AY534144_24(AY534144|pid:none) Saprolegnia ferax strain ATCC 360... 51 1e-04
(Q7VKE6) RecName: Full=30S ribosomal protein S14; &AE017143_165... 51 1e-04
(A5ISL8) RecName: Full=30S ribosomal protein S14; &(A6QGN8) Rec... 51 1e-04
(Q5E8A1) RecName: Full=30S ribosomal protein S14; &CP000020_243... 51 1e-04
(Q4A5D6) RecName: Full=50S ribosomal protein L6; &AE017245_622(... 50 2e-04
(Q12SU6) RecName: Full=30S ribosomal protein S14; &CP000302_183... 50 2e-04
(Q0HNS4) RecName: Full=30S ribosomal protein S14; &(Q0I092) Rec... 50 2e-04
(A4QCK9) RecName: Full=30S ribosomal protein S14; &AP009044_995... 50 2e-04
EU912438_139(EU912438|pid:none) Vaucheria litorea chloroplast, c... 50 2e-04
(Q7MPH5) RecName: Full=30S ribosomal protein S14; &(Q8DE53) Rec... 50 2e-04
(Q1CY73) RecName: Full=30S ribosomal protein S14; &CP000113_636... 50 2e-04
(Q65QW8) RecName: Full=30S ribosomal protein S14; &AE016827_203... 50 3e-04
CP000934_699(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 50 3e-04
(A5IV19) RecName: Full=50S ribosomal protein L6; &(A6QJ77) RecN... 50 3e-04
(A3Q995) RecName: Full=30S ribosomal protein S14; &CP000606_170... 50 3e-04
BX537326_4(BX537326|pid:none) Zebrafish DNA sequence from clone ... 50 3e-04
(A5F553) RecName: Full=30S ribosomal protein S14; &(Q9KNZ7) Rec... 50 3e-04
AM778938_83(AM778938|pid:none) Microcystis aeruginosa PCC 7806 g... 50 3e-04
(Q88XX1) RecName: Full=50S ribosomal protein L6; &AL935254_260(... 50 3e-04
(Q3A9T1) RecName: Full=50S ribosomal protein L6; &CP000141_2231... 50 3e-04
(B0K5Q8) RecName: Full=50S ribosomal protein L6; &CP000923_860(... 50 3e-04
(A9WTS9) RecName: Full=30S ribosomal protein S14; &CP000910_284... 50 3e-04
Z21677_17(Z21677|pid:none) Thermotoga maritima DNA for spc operon. 50 3e-04
(B5YDV8) RecName: Full=50S ribosomal protein L6; &CP001146_829(... 50 3e-04
CP000916_1008(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 50 3e-04
AF222718_32(AF222718|pid:none) Chrysodidymus synuroideus mitocho... 50 3e-04
CP000879_750(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 50 3e-04
(Q8K963) RecName: Full=30S ribosomal protein S14; &AE013218_463... 50 3e-04
CP000061_507(CP000061|pid:none) Aster yellows witches'-broom phy... 50 3e-04
M74441_2(M74441|pid:none) Chlorella-like algae ribulose 1,5-bisp... 50 3e-04
(Q2NIW9) RecName: Full=50S ribosomal protein L6; 50 3e-04
CP001321_1304(CP001321|pid:none) Haemophilus parasuis SH0165, co... 50 3e-04
(A8MLF5) RecName: Full=50S ribosomal protein L6; &CP000853_499(... 50 3e-04
(Q9ZAE4) RecName: Full=50S ribosomal protein L6; &AE000512_1458... 50 3e-04
CP001139_237(CP001139|pid:none) Vibrio fischeri MJ11 chromosome ... 50 3e-04
(A5VQZ3) RecName: Full=30S ribosomal protein S14; &(B0CH19) Rec... 49 4e-04
(Q4FLN1) RecName: Full=30S ribosomal protein S14; &CP000084_108... 49 4e-04
BT065213_1(BT065213|pid:none) Zea mays full-length cDNA clone ZM... 49 4e-04
(A8G1D5) RecName: Full=30S ribosomal protein S14; &CP000821_429... 49 4e-04
(O67565) RecName: Full=50S ribosomal protein L6; &AE000657_1141... 49 4e-04
(B8E1E8) RecName: Full=50S ribosomal protein L6; &CP001251_935(... 49 4e-04
(Q11HR5) RecName: Full=30S ribosomal protein S14; &CP000390_165... 49 4e-04
EU959418_1(EU959418|pid:none) Zea mays clone 218104 unknown mRNA. 49 4e-04
(Q71WG1) RecName: Full=50S ribosomal protein L6; &AE017262_2565... 49 6e-04
EU924196_1(EU924196|pid:none) Nymphaea tetragona ribosomal prote... 49 6e-04
(P46898) RecName: Full=50S ribosomal protein L6; AltName: Full=B... 49 6e-04
(B7J258) RecName: Full=50S ribosomal protein L6; &(O51446) RecN... 49 6e-04
(Q63H75) RecName: Full=50S ribosomal protein L6; &(Q6HPP3) RecN... 49 6e-04
(Q2W2K4) RecName: Full=30S ribosomal protein S14; &AP007255_311... 49 6e-04
(A5VLJ0) RecName: Full=50S ribosomal protein L6; &(B2G8W3) RecN... 49 6e-04
(A1JS18) RecName: Full=30S ribosomal protein S14; &AM286415_374... 49 6e-04
(P32976) RecName: Full=30S ribosomal protein S14, chloroplastic;... 49 6e-04
(Q2RQX3) RecName: Full=30S ribosomal protein S14; &CP000230_266... 49 6e-04
CP000943_323(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 49 6e-04
(Q92AC7) RecName: Full=30S ribosomal protein S14; &AI1681(AI168... 49 6e-04
CP001620_457(CP001620|pid:none) Corynebacterium kroppenstedtii D... 49 6e-04
(A6T3J1) RecName: Full=30S ribosomal protein S14; 49 6e-04
CR382136_602(CR382136|pid:none) Debaryomyces hansenii strain CBS... 49 6e-04
(Q2RQX5) RecName: Full=50S ribosomal protein L6; &CP000230_2665... 49 6e-04
(Q9CL43) RecName: Full=30S ribosomal protein S14; &AE004439_140... 49 6e-04
AF040101_6(AF040101|pid:none) Aquifex pyrophilus ribosomal prote... 49 6e-04
(A0KRN7) RecName: Full=30S ribosomal protein S14; &CP000469_211... 49 7e-04
(Q1QN17) RecName: Full=30S ribosomal protein S14; &CP000319_147... 49 7e-04
(A7Z0Q3) RecName: Full=50S ribosomal protein L6; &CP000560_131(... 49 7e-04
FJ858268_3(FJ858268|pid:none) Micromonas pusilla CCMP1545 mitoch... 49 7e-04
CP000450_552(CP000450|pid:none) Nitrosomonas eutropha C91, compl... 49 7e-04
(P47412) RecName: Full=50S ribosomal protein L6; &CP000925_169(... 49 7e-04
AP009384_2541(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 49 7e-04
CP001616_112(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 49 7e-04
(Q3B6E9) RecName: Full=30S ribosomal protein S14; &CP000096_190... 49 7e-04
(Q8EUC7) RecName: Full=30S ribosomal protein S8; &BA000026_999(... 49 7e-04
(A8IAQ2) RecName: Full=30S ribosomal protein S14; 49 7e-04
(B0KCL5) RecName: Full=50S ribosomal protein L6; &CP000924_385(... 49 7e-04
(Q04C00) RecName: Full=50S ribosomal protein L6; &(Q1GBK3) RecN... 49 7e-04
(A3PGM4) RecName: Full=30S ribosomal protein S14; &(A4WVJ5) Rec... 48 0.001
(A7HM37) RecName: Full=50S ribosomal protein L6; &CP000771_1097... 48 0.001
CP000806_81(CP000806|pid:none) Cyanothece sp. ATCC 51142 circula... 48 0.001
(Q50303) RecName: Full=50S ribosomal protein L6; &S62827(S62827... 48 0.001
(Q5P319) RecName: Full=30S ribosomal protein S14; &CR555306_217... 48 0.001
(O52347) RecName: Full=50S ribosomal protein L6; &AE015450_66(A... 48 0.001
(A5UHU4) RecName: Full=30S ribosomal protein S14; &CP000672_122... 48 0.001
AF538053_2(AF538053|pid:none) Monosiga brevicollis mitochondrion... 48 0.001
(A5WCK3) RecName: Full=30S ribosomal protein S14; &CP000713_434... 48 0.001
(Q5LW45) RecName: Full=30S ribosomal protein S14; &CP000031_487... 48 0.001
(Q0SQF9) RecName: Full=50S ribosomal protein L6; &(Q0TMR1) RecN... 48 0.001
(A5UDT4) RecName: Full=30S ribosomal protein S14; &(P44381) Rec... 48 0.001
(A9MN61) RecName: Full=30S ribosomal protein S14; &CP000880_403... 48 0.001
(A1T0C9) RecName: Full=30S ribosomal protein S14; &CP000510_332... 48 0.001
AE000513_2065(AE000513|pid:none) Deinococcus radiodurans R1 chro... 48 0.001
(B1VFG1) RecName: Full=30S ribosomal protein S14; &AM942444_540... 48 0.001
(Q2YEI7) RecName: Full=50S ribosomal protein L6; &AY912116_1(AY... 48 0.001
(B2Y1U8) RecName: Full=30S ribosomal protein S14, chloroplastic;... 48 0.001
(A3DA59) RecName: Full=30S ribosomal protein S14; &(A6WHU1) Rec... 48 0.001
(Q5QXX1) RecName: Full=30S ribosomal protein S14; &AE017340_189... 48 0.001
(Q73H99) RecName: Full=30S ribosomal protein S14; &AE017196_597... 48 0.001
(A6VLK1) RecName: Full=30S ribosomal protein S14; &CP000746_466... 48 0.001
CP000863_3263(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 48 0.001
(A9IHT7) RecName: Full=30S ribosomal protein S14; &AM902716_495... 48 0.001
(Q06SD8) RecName: Full=30S ribosomal protein S14, chloroplastic;... 48 0.001
(Q0P3K4) RecName: Full=30S ribosomal protein S14, chloroplastic;... 48 0.001
AY494079_3(AY494079|pid:none) Fucus vesiculosus mitochondrion, c... 48 0.001
CP001071_913(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 47 0.002
(Q1QDH3) RecName: Full=30S ribosomal protein S14; &CP000082_502... 47 0.002
BC122369_1(BC122369|pid:none) Danio rerio zgc:153664, mRNA (cDNA... 47 0.002
AM167904_47(AM167904|pid:none) Bordetella avium 197N complete ge... 47 0.002
(Q49ZF3) RecName: Full=50S ribosomal protein L6; &AP008934_678(... 47 0.002
(P51319) RecName: Full=30S ribosomal protein S14, chloroplastic;... 47 0.002
(A1B040) RecName: Full=30S ribosomal protein S14; &CP000489_767... 47 0.002
AP010656_79(AP010656|pid:none) Candidatus Azobacteroides pseudot... 47 0.002
(Q3J8S7) RecName: Full=30S ribosomal protein S14; &CP000127_221... 47 0.002
BA000042_18(BA000042|pid:none) Nicotiana tabacum mitochondrial D... 47 0.002
(A5D5E5) RecName: Full=30S ribosomal protein S13; &AP009389_345... 47 0.002
CP001032_212(CP001032|pid:none) Opitutus terrae PB90-1, complete... 47 0.002
(Q2RFR2) RecName: Full=50S ribosomal protein L6; &CP000232_2385... 47 0.002
AM260525_1346(AM260525|pid:none) Bartonella tribocorum CIP 10547... 47 0.002
AP008955_236(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 47 0.002
(Q6XYX3) RecName: Full=50S ribosomal protein L6; &AY198133_35(A... 47 0.002
(Q89A79) RecName: Full=30S ribosomal protein S14; &AE016826_416... 47 0.002
(Q1WSA5) RecName: Full=50S ribosomal protein L6; &CP000233_1401... 47 0.002
(B2A4F4) RecName: Full=50S ribosomal protein L6; &CP001034_209(... 47 0.002
(Q16AD1) RecName: Full=30S ribosomal protein S14; &CP000362_132... 47 0.002
(Q8RIG9) RecName: Full=30S ribosomal protein S14; &AE009951_126... 47 0.002
(A1KB14) RecName: Full=30S ribosomal protein S14; 47 0.002
(A8M6L1) RecName: Full=30S ribosomal protein S14; &CP000850_279... 47 0.002
(P49548) RecName: Full=50S ribosomal protein L6, chloroplastic; ... 47 0.002
(A0T0S2) RecName: Full=30S ribosomal protein S14, chloroplastic;... 47 0.002
(A6W379) RecName: Full=30S ribosomal protein S14; &CP000749_421... 47 0.002
(A1USQ7) RecName: Full=30S ribosomal protein S14; &CP000524_671... 47 0.002
(Q9RSL5) RecName: Full=30S ribosomal protein S14; 47 0.003
(B5XNA6) RecName: Full=30S ribosomal protein S14; &AP006725_455... 47 0.003
(Q6F1W9) RecName: Full=30S ribosomal protein S13; &AE017263_148... 47 0.003
(A4X8U4) RecName: Full=30S ribosomal protein S14; &CP000667_280... 47 0.003
(A1AGJ6) RecName: Full=30S ribosomal protein S14; &(A7ZSJ6) Rec... 47 0.003
FJ493497_40(FJ493497|pid:none) Monomastix sp. OKE-1 chloroplast,... 47 0.003
(B5YDW7) RecName: Full=30S ribosomal protein S13; &CP001146_838... 47 0.003
AM295250_1711(AM295250|pid:none) Staphylococcus carnosus subsp. ... 47 0.003
(Q1GK16) RecName: Full=30S ribosomal protein S14; &CP000377_267... 47 0.003
CP000236_407(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 47 0.003
(Q3AV45) RecName: Full=30S ribosomal protein S14; &CP000097_177... 47 0.003
(Q8DHW7) RecName: Full=30S ribosomal protein S14; &BA000039_182... 47 0.003
AY773199_14(AY773199|pid:none) Synthetic construct 30S ribosomal... 47 0.003
(A8GYY9) RecName: Full=30S ribosomal protein S14; &(B0TLZ9) Rec... 47 0.003
CP000030_620(CP000030|pid:none) Anaplasma marginale str. St. Mar... 47 0.003
EU922584_1(EU922584|pid:none) Pelargonium cotyledonis ribosomal ... 47 0.003
AE017321_323(AE017321|pid:none) Wolbachia endosymbiont strain TR... 47 0.003
(Q9PE61) RecName: Full=50S ribosomal protein L6; &AE003849_1164... 47 0.003
CP001175_663(CP001175|pid:none) Listeria monocytogenes HCC23, co... 46 0.004
(Q0AII3) RecName: Full=30S ribosomal protein S14; &CP000450_550... 46 0.004
(Q7VQD5) RecName: Full=30S ribosomal protein S14; &BX248583_191... 46 0.004
(Q9PE63) RecName: Full=30S ribosomal protein S14; &AE003849_116... 46 0.004
AC135225_1(AC135225|pid:none) Oryza sativa chromosome 3 BAC OJ11... 46 0.004
AC092556_14(AC092556|pid:none) Oryza sativa chromosome 3 BAC OSJ... 46 0.004
CP000671_1428(CP000671|pid:none) Haemophilus influenzae PittEE, ... 46 0.004
AK061469_1(AK061469|pid:none) Oryza sativa Japonica Group cDNA c... 46 0.004
(B8E1F7) RecName: Full=30S ribosomal protein S13; &CP001251_944... 46 0.004
(Q73PL7) RecName: Full=50S ribosomal protein L6; &AE017226_775(... 46 0.004
(B5ELZ4) RecName: Full=50S ribosomal protein L6; &(B7J482) RecN... 46 0.004
AP009484_210(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 46 0.004
(Q4L899) RecName: Full=50S ribosomal protein L6; &AP006716_817(... 46 0.004
CU234118_2908(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 46 0.004
CP001281_3143(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 46 0.004
(Q5LW43) RecName: Full=50S ribosomal protein L6; &CP000031_489(... 46 0.004
(A0R550) RecName: Full=30S ribosomal protein S14; &CP000480_586... 46 0.005
(P48944) RecName: Full=30S ribosomal protein S14; &BA000022_237... 46 0.005
BA000021_558(BA000021|pid:none) Wigglesworthia glossinidia endos... 46 0.005
(A4JAQ3) RecName: Full=30S ribosomal protein S14; &CP000614_328... 46 0.005
(A6TWG7) RecName: Full=50S ribosomal protein L6; &CP000724_4292... 46 0.005
AF287134_33(AF287134|pid:none) Ochromonas danica mitochondrial D... 46 0.005
EF587438_1(EF587438|pid:none) Floydiella terrestris strain UTEX ... 46 0.005
(Q2JQN4) RecName: Full=50S ribosomal protein L6; &CP000239_1110... 46 0.005
(A4VSG8) RecName: Full=50S ribosomal protein L6; &(A4VYQ7) RecN... 46 0.005
(O78506) RecName: Full=30S ribosomal protein S14, chloroplastic;... 46 0.005
(A4WVJ3) RecName: Full=50S ribosomal protein L6; &CP000661_2495... 46 0.005
AF110138_13(AF110138|pid:none) Nephroselmis olivacea mitochondri... 46 0.005
FM242711_1867(FM242711|pid:none) Listeria monocytogenes Clip8145... 46 0.005
(Q1IX96) RecName: Full=30S ribosomal protein S13; &CP000359_182... 46 0.005
AM942759_3238(AM942759|pid:none) Proteus mirabilis strain HI4320... 45 0.006
(Q4JTZ7) RecName: Full=30S ribosomal protein S14; &CR931997_153... 45 0.006
(Q04G71) RecName: Full=50S ribosomal protein L6; &CP000411_546(... 45 0.006
CP000878_1278(CP000878|pid:none) Prochlorococcus marinus str. MI... 45 0.006
(A9NEE8) RecName: Full=50S ribosomal protein L6; &CP000896_84(C... 45 0.006
CP001099_188(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 45 0.006
(Q1KVT9) RecName: Full=30S ribosomal protein S14, chloroplastic;... 45 0.006
(Q2LQC2) RecName: Full=50S ribosomal protein L6; &CP000252_317(... 45 0.006
(Q1QDH1) RecName: Full=50S ribosomal protein L6; &CP000323_498(... 45 0.006
AY552545_89(AY552545|pid:none) Uncultured marine gamma proteobac... 45 0.006
(A1VEA1) RecName: Full=50S ribosomal protein L6; &(Q72CG5) RecN... 45 0.006
(Q3Z966) RecName: Full=50S ribosomal protein L6; &CP000027_478(... 45 0.006
(Q3API6) RecName: Full=30S ribosomal protein S14; &CP000108_181... 45 0.006
(Q98PZ7) RecName: Full=50S ribosomal protein L6; &AL445565_45(A... 45 0.006
CP001339_2284(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 45 0.006
AE017342_290(AE017342|pid:none) Cryptococcus neoformans var. neo... 45 0.006
EU427498_2(EU427498|pid:none) Phytophthora ramorum haplotype IV ... 45 0.006
EF494739_14(EF494739|pid:none) Blastocystis sp. DMP/02-328 mitoc... 45 0.008
AM422018_571(AM422018|pid:none) Candidatus Phytoplasma australie... 45 0.008
AP008937_1500(AP008937|pid:none) Lactobacillus fermentum IFO 395... 45 0.008
(Q87E69) RecName: Full=30S ribosomal protein S14; &AE009442_421... 45 0.008
(Q035A7) RecName: Full=30S ribosomal protein S13; &CP000423_234... 45 0.008
(Q06FW3) RecName: Full=30S ribosomal protein S14, chloroplastic;... 45 0.008
(Q6G2X8) RecName: Full=30S ribosomal protein S14; &BX897699_101... 45 0.008
(Q83GW6) RecName: Full=30S ribosomal protein S14; &(Q83IB4) Rec... 45 0.008
AY534144_25(AY534144|pid:none) Saprolegnia ferax strain ATCC 360... 45 0.008
CP001358_663(CP001358|pid:none) Desulfovibrio desulfuricans subs... 45 0.008
(B8DNB1) RecName: Full=50S ribosomal protein L6; &CP001197_93(C... 45 0.008
(A0K3N8) RecName: Full=30S ribosomal protein S14; &(Q0BJ33) Rec... 45 0.011
(Q1GK14) RecName: Full=50S ribosomal protein L6; &CP000377_269(... 45 0.011
X01563_5(X01563|pid:none) Escherichia coli spc ribosomal protein... 45 0.011
(Q319U5) RecName: Full=30S ribosomal protein S14; &CP000111_141... 45 0.011
(A8GKI4) RecName: Full=30S ribosomal protein S14; &CP000826_451... 45 0.011
CP001341_2619(CP001341|pid:none) Arthrobacter chlorophenolicus A... 45 0.011
CP000235_268(CP000235|pid:none) Anaplasma phagocytophilum HZ, co... 45 0.011
(Q87E67) RecName: Full=50S ribosomal protein L6; &AE009442_423(... 45 0.011
(Q6B8U8) RecName: Full=30S ribosomal protein S14, chloroplastic;... 45 0.011
(A6UZK1) RecName: Full=30S ribosomal protein S14; &(B7V657) Rec... 45 0.011
EU427497_2(EU427497|pid:none) Phytophthora ramorum haplotype III... 45 0.011
AP009385_2935(AP009385|pid:none) Burkholderia multivorans ATCC 1... 45 0.011
(Q89A80) RecName: Full=50S ribosomal protein L6; &AE016826_414(... 45 0.011
(Q7NQG5) RecName: Full=30S ribosomal protein S14; &AE016825_417... 45 0.011
CP001111_771(CP001111|pid:none) Stenotrophomonas maltophilia R55... 45 0.011
(A5N4R2) RecName: Full=50S ribosomal protein L6; &AP009049_198(... 45 0.011
(Q6FZD5) RecName: Full=30S ribosomal protein S14; &BX897700_785... 45 0.011
(Q6F7S5) RecName: Full=30S ribosomal protein S14; &CR543861_288... 45 0.011
(Q0K632) RecName: Full=30S ribosomal protein S14; &AM260479_338... 45 0.011
CT573071_739(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 45 0.011
(Q5HM14) RecName: Full=50S ribosomal protein L6; &(Q8CRH5) RecN... 45 0.011
CU469464_354(CU469464|pid:none) Candidatus Phytoplasma mali stra... 45 0.011
(Q4FUE1) RecName: Full=50S ribosomal protein L6; &CP000082_504(... 45 0.011
(B2HZ95) RecName: Full=30S ribosomal protein S14; &(B7GW15) Rec... 45 0.011
(Q9X8K9) RecName: Full=30S ribosomal protein S14; &AL939116_149... 45 0.011
(Q11QC7) RecName: Full=50S ribosomal protein L6; &CP000383_3095... 44 0.014
AM933172_3240(AM933172|pid:none) Salmonella enterica subsp. ente... 44 0.014
(P51300) RecName: Full=50S ribosomal protein L6, chloroplastic; ... 44 0.014
CP001068_3239(CP001068|pid:none) Ralstonia pickettii 12J chromos... 44 0.014
CU468230_405(CU468230|pid:none) Acinetobacter baumannii str. SDF... 44 0.014
(Q7MYG4) RecName: Full=30S ribosomal protein S14; &BX571874_254... 44 0.014
CU694391_137(CU694391|pid:none) Ralstonia solanacearum strain Mo... 44 0.014
(O83234) RecName: Full=50S ribosomal protein L6; &AE000520_202(... 44 0.014
(Q6F7S7) RecName: Full=50S ribosomal protein L6; &CR543861_2887... 44 0.014
(B0UX29) RecName: Full=50S ribosomal protein L6; &CP000947_1927... 44 0.014
CP000781_4742(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 44 0.014
(Q21M43) RecName: Full=50S ribosomal protein L6; &CP000282_972(... 44 0.014
CP000825_1401(CP000825|pid:none) Prochlorococcus marinus str. MI... 44 0.014
(P66409) RecName: Full=30S ribosomal protein S14; &(P66410) Rec... 44 0.014
CU179680_523(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 44 0.014
CP001600_3447(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 44 0.014
AY359242_10(AY359242|pid:none) Pseudendoclonium akinetum mitocho... 44 0.014
(P46179) RecName: Full=30S ribosomal protein S14; &D31786_8(D31... 44 0.014
(Q0I147) RecName: Full=50S ribosomal protein L6; &CP000436_77(C... 44 0.014
(Q8EUC8) RecName: Full=50S ribosomal protein L6; &BA000026_998(... 44 0.018
(A8YXM0) RecName: Full=50S ribosomal protein L6; &CP000517_260(... 44 0.018
CP001098_130(CP001098|pid:none) Halothermothrix orenii H 168, co... 44 0.018
(Q9RSJ9) RecName: Full=30S ribosomal protein S13; &AE000513_208... 44 0.018
AY500367_4(AY500367|pid:none) Desmarestia viridis mitochondrion,... 44 0.018
(Q8M9Y2) RecName: Full=30S ribosomal protein S14, chloroplastic;... 44 0.018
EU922297_1(EU922297|pid:none) Geranium macrorrhizum ribosomal pr... 44 0.018
CP000084_1081(CP000084|pid:none) Candidatus Pelagibacter ubique ... 44 0.018
CP001330_441(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 44 0.018
(Q04BZ1) RecName: Full=30S ribosomal protein S13; &(Q1GBJ4) Rec... 44 0.018
(Q2SRH7) RecName: Full=30S ribosomal protein S13; &CP000123_636... 44 0.018
AP010904_1235(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 44 0.018
(Q82X78) RecName: Full=30S ribosomal protein S14; &AL954747_414... 44 0.018
CP000951_383(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 44 0.018
CP001071_430(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 44 0.018
(B2FQJ7) RecName: Full=30S ribosomal protein S14; &AM743169_870... 44 0.018
(Q7U516) RecName: Full=30S ribosomal protein S14; &BX569694_80(... 44 0.018
CU469464_356(CU469464|pid:none) Candidatus Phytoplasma mali stra... 44 0.018
(A3PGM6) RecName: Full=50S ribosomal protein L6; &(Q3J5Q7) RecN... 44 0.018
(Q5NQ50) RecName: Full=50S ribosomal protein L6; &AE008692_531(... 44 0.018
(Q8A491) RecName: Full=50S ribosomal protein L6; &AE015928_2711... 44 0.018
(A6LEH6) RecName: Full=50S ribosomal protein L6; &CP000140_2295... 44 0.018
(Q7VAZ6) RecName: Full=30S ribosomal protein S14; &AE017126_130... 44 0.018
(Q6MSP7) RecName: Full=30S ribosomal protein S13; &BX293980_688... 44 0.018
CP001150_29(CP001150|pid:none) Rhodobacter sphaeroides KD131 chr... 44 0.018
(A5CXL9) RecName: Full=50S ribosomal protein L6; &AP009247_175(... 44 0.018
(Q03IG6) RecName: Full=50S ribosomal protein L6; &(Q5LXS6) RecN... 44 0.018
(P52858) RecName: Full=30S ribosomal protein S14; &AP008231_107... 44 0.018
AP008981_1059(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 44 0.024
(A0JZ51) RecName: Full=30S ribosomal protein S13; &CP000454_292... 44 0.024
AP009256_345(AP009256|pid:none) Bifidobacterium adolescentis ATC... 44 0.024
(A2SLE4) RecName: Full=30S ribosomal protein S14; &CP000555_342... 44 0.024
(A9M3V3) RecName: Full=30S ribosomal protein S14; &(P66407) Rec... 44 0.024
CP001337_2907(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 44 0.024
(Q11QC5) RecName: Full=30S ribosomal protein S14; &CP000383_309... 44 0.024
CP001281_3153(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 44 0.024
FJ859351_28(FJ859351|pid:none) Micromonas sp. RCC299 mitochondri... 44 0.024
(B7GJ92) RecName: Full=30S ribosomal protein S13; &CP000922_130... 44 0.024
(A5GRD9) RecName: Full=30S ribosomal protein S14; &CT978603_545... 44 0.024
FM864216_138(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 44 0.024
CR925677_614(CR925677|pid:none) Ehrlichia ruminantium str. Garde... 44 0.024
(Q5FM76) RecName: Full=50S ribosomal protein L6; &CP000033_290(... 44 0.024
AE017308_250(AE017308|pid:none) Mycoplasma mobile 163K complete ... 44 0.024
(Q3MCD2) RecName: Full=30S ribosomal protein S14; &CP000117_172... 44 0.024
(A0T0Y7) RecName: Full=50S ribosomal protein L6, chloroplastic; ... 44 0.024
(Q3API8) RecName: Full=50S ribosomal protein L6; &CP000108_1808... 44 0.024
CP001628_1824(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 44 0.024
CP001129_67(CP001129|pid:none) Streptococcus equi subsp. zooepid... 44 0.024
EU017210_1(EU017210|pid:none) Scaevola aemula ribosomal protein ... 44 0.024
(Q85CU9) RecName: Full=30S ribosomal protein S14, chloroplastic;... 44 0.024
(Q46WF7) RecName: Full=30S ribosomal protein S14; &CP000090_314... 43 0.031
CP001129_76(CP001129|pid:none) Streptococcus equi subsp. zooepid... 43 0.031
AM946015_90(AM946015|pid:none) Streptococcus uberis 0140J comple... 43 0.031
(A3PE39) RecName: Full=30S ribosomal protein S14; &CP000576_139... 43 0.031
(Q2NQN5) RecName: Full=30S ribosomal protein S14; &AP008232_226... 43 0.031
(Q9CDX8) RecName: Full=50S ribosomal protein L6; &AE005176_2083... 43 0.031
(Q6NJ87) RecName: Full=50S ribosomal protein L6; &BX248355_141(... 43 0.031
FM864216_137(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 43 0.031
(Q03IH5) RecName: Full=30S ribosomal protein S13; &(Q5LXT5) Rec... 43 0.031
(Q7UN05) RecName: Full=50S ribosomal protein L6; &BX294146_302(... 43 0.031
AY774332_1(AY774332|pid:none) Synthetic construct Francisella tu... 43 0.031
CP000915_1216(CP000915|pid:none) Francisella tularensis subsp. m... 43 0.031
CP001157_621(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 43 0.031
(Q252W7) RecName: Full=50S ribosomal protein L6; &AP006861_899(... 43 0.031
(B3CN39) RecName: Full=30S ribosomal protein S14; &AM999887_117... 43 0.031
(A4IZR9) RecName: Full=50S ribosomal protein L6; &CP000608_1404... 43 0.031
(Q4G393) RecName: Full=30S ribosomal protein S14, chloroplastic;... 43 0.031
CP001100_1093(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 43 0.031
(B0U0X4) RecName: Full=50S ribosomal protein L6; &CP000937_567(... 43 0.031
EU922225_1(EU922225|pid:none) Geranium carolinianum ribosomal pr... 43 0.031
CP001107_412(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 43 0.031
(Q8ETW8) RecName: Full=50S ribosomal protein L6; &BA000028_134(... 43 0.031
(A9VPA2) RecName: Full=30S ribosomal protein S13; &CP000903_130... 43 0.031
AP009180_143(AP009180|pid:none) Candidatus Carsonella ruddii PV ... 43 0.031
AM422018_561(AM422018|pid:none) Candidatus Phytoplasma australie... 43 0.031
DQ832717_44(DQ832717|pid:none) Phytophthora sojae mitochondrion,... 43 0.031
(Q1XDG8) RecName: Full=30S ribosomal protein S14, chloroplastic;... 43 0.031
(Q5SD10) RecName: Full=30S ribosomal protein S14, chloroplastic;... 43 0.041
CP000863_3265(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 43 0.041
CP001050_2448(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 43 0.041
BX248583_193(BX248583|pid:none) Blochmannia floridanus complete ... 43 0.041
(A8IAP9) RecName: Full=50S ribosomal protein L6; &AP009384_2539... 43 0.041
(P02391) RecName: Full=50S ribosomal protein L6; AltName: Full=B... 43 0.041
(Q2NIX9) RecName: Full=30S ribosomal protein S13; &CP000061_497... 43 0.041
(P06370) RecName: Full=30S ribosomal protein S14, chloroplastic;... 43 0.041
(Q3A6M3) RecName: Full=30S ribosomal protein S13; &CP000142_799... 43 0.041
CP001275_919(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 43 0.041
R5BS0F(A02766;B39085;S59061)ribosomal protein L6 - Bacillus stea... 43 0.041
(Q1LTC5) RecName: Full=30S ribosomal protein S14; &CP000238_310... 43 0.041
CP000922_120(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 43 0.041
(B5RPJ7) RecName: Full=50S ribosomal protein L6; &CP000993_466(... 43 0.041
A37315(A37315;H42645;H71505;A29829) ribosomal protein L6 - Chlam... 43 0.041
(A2C795) RecName: Full=30S ribosomal protein S14; &CP000554_599... 43 0.041
(Q7V9X6) RecName: Full=50S ribosomal protein L6; &AE017126_1695... 43 0.041
(Q19V89) RecName: Full=30S ribosomal protein S14, chloroplastic;... 43 0.041
(A4VSH6) RecName: Full=30S ribosomal protein S13; &(A4VYR6) Rec... 43 0.041
(Q67JW8) RecName: Full=30S ribosomal protein S13; &AP006840_304... 43 0.041
(Q3KLI3) RecName: Full=50S ribosomal protein L6; &CP000051_540(... 43 0.041
(A4VHP3) RecName: Full=30S ribosomal protein S14; &CP000304_786... 43 0.041
(A7GJ59) RecName: Full=50S ribosomal protein L6; &CP000728_3450... 43 0.041
(A8F9B0) RecName: Full=30S ribosomal protein S13; &CP000813_127... 43 0.041
CP001056_223(CP001056|pid:none) Clostridium botulinum B str. Ekl... 43 0.041
(Q6MSP0) RecName: Full=50S ribosomal protein L6; &BX293980_695(... 42 0.053
(A5CXL7) RecName: Full=30S ribosomal protein S14; &AP009247_173... 42 0.053
(Q4K548) RecName: Full=50S ribosomal protein L6; &CP000076_5484... 42 0.053
CP001010_62(CP001010|pid:none) Polynucleobacter necessarius subs... 42 0.053
(Q1H4M2) RecName: Full=50S ribosomal protein L6; &CP000284_294(... 42 0.053
(P66419) RecName: Full=30S ribosomal protein S14; &(P66420) Rec... 42 0.053
(B7IT44) RecName: Full=30S ribosomal protein S13; &CP001186_129... 42 0.053
(Q3K603) RecName: Full=50S ribosomal protein L6; &CP000094_5059... 42 0.053
AM181176_5394(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 42 0.053
(A2RNN8) RecName: Full=50S ribosomal protein L6; &AM406671_2320... 42 0.053

>(O21038) RecName: Full=Ribosomal protein S13, mitochondrial;
&AB000109_35(AB000109|pid:none)
&D63523_7(D63523|pid:none) &T43780(T43780)
Length = 169

Score = 258 bits (659), Expect = 5e-67
Identities = 134/143 (93%), Positives = 134/143 (93%)
Frame = +2

Query: 1280 MGIVIGKIELNNEKQIIGELKKKIKGVNFHIAQKVIMLSGNVASIKGNKLIQSEEKQIVD 1459
MGIVIGKIELNNEKQIIGELKKKIKGVNFHIAQKVIMLSGNVASIKGNKLIQSEEKQIVD
Sbjct: 1 MGIVIGKIELNNEKQIIGELKKKIKGVNFHIAQKVIMLSGNVASIKGNKLIQSEEKQIVD 60

Query: 1460 ILQRFKGLYSHNYGLKEEALAKIRRIENVYRYIRVRQGYPVRGRTKSNANTVKRQRNVST 1639
ILQRFKGLYSHNYGLKEEALAKIRRIENVYRYIRVRQGYPVRGRTKSNANTVKRQRNVST
Sbjct: 61 ILQRFKGLYSHNYGLKEEALAKIRRIENVYRYIRVRQGYPVRGRTKSNANTVKRQRNVST 120

Query: 1640 GVKTKRKKMYLLKVNQQIEKREK 1708
GVKTKRKKMYLL K K
Sbjct: 121 GVKTKRKKMYLLNGKPTNRKERK 143

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,787,280,509
Number of extensions: 28024693
Number of successful extensions: 82874
Number of sequences better than 10.0: 1056
Number of HSP's gapped: 82662
Number of HSP's successfully gapped: 1058
Length of query: 569
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 435
Effective length of database: 617,481,958
Effective search space: 268604651730
Effective search space used: 268604651730
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.51 gvh: 0.58 alm: 0.41 top: 0.53 tms: 0.00 mit: 0.34 mip: 0.08
nuc: 0.15 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
36.0 %: cytoplasmic
16.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U15388-1 is nuc

VS (DIR, S) 6
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 1
FC (DIR, S) 4
FC-IC (SUB) 3