| Homology vs CSM-cDNA |
 |
| Homology vs DNA |
Query= Contig-U15380-1 (Contig-U15380-1Q) /CSM_Contig/Contig-U15380-1Q.Seq.d
(132 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum3.seq;
ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq;
ddbjhum9.seq; /db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod11.seq; ddbjrod12.seq; ddbjrod13.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/a/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq; ddbjvrt6.seq;
/db/DDBJNEW.DATA/a/new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; ddbjinv6.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln10.seq;
ddbjpln11.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
ddbjbct8.seq; ddbjbct9.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq;
ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq; ddbjvrl4.seq;
/db/DDBJNEW.DATA/a/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss100.seq; ddbjgss101.seq; ddbjgss102.seq; ddbjgss103.seq;
ddbjgss104.seq; ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq;
ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq;
ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq;
ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq;
ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq;
ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq;
ddbjgss32.seq; ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq;
ddbjgss36.seq; ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq; ddbjgss55.seq;
ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq; ddbjgss59.seq;
ddbjgss60.seq; ddbjgss61.seq; ddbjgss62.seq; ddbjgss63.seq;
ddbjgss64.seq; ddbjgss65.seq; ddbjgss66.seq; ddbjgss67.seq;
ddbjgss68.seq; ddbjgss69.seq; ddbjgss7.seq; ddbjgss70.seq;
ddbjgss71.seq; ddbjgss72.seq; ddbjgss73.seq; ddbjgss74.seq;
ddbjgss75.seq; ddbjgss76.seq; ddbjgss77.seq; ddbjgss78.seq;
ddbjgss79.seq; ddbjgss8.seq; ddbjgss80.seq; ddbjgss81.seq;
ddbjgss82.seq; ddbjgss83.seq; ddbjgss84.seq; ddbjgss85.seq;
ddbjgss86.seq; ddbjgss87.seq; ddbjgss88.seq; ddbjgss89.seq;
ddbjgss9.seq; ddbjgss90.seq; ddbjgss91.seq; ddbjgss92.seq;
ddbjgss93.seq; ddbjgss94.seq; ddbjgss95.seq; ddbjgss96.seq;
ddbjgss97.seq; ddbjgss98.seq; ddbjgss99.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat15.seq; ddbjpat16.seq; ddbjpat2.seq; ddbjpat3.seq;
ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
ddbjpat9.seq; /db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; ddbjsts3.seq; ddbjsts4.seq;
/db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/a/new_est_cele1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_lesc1.seq; /db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq;
est_mous2.seq; est_mous3.seq; /db/DDBJNEW.DATA/a/new_est_mous1.seq;
est_osat1.seq; /db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; est_rest5.seq;
/db/DDBJNEW.DATA/a/new_est_rest1.seq;
/db/DDBJNEW.DATA/a/new_est_rest2.seq
40,437,674 sequences; ],876,986,368 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC117073|AC117073.2 Dictyostelium discoideum chromosome 2 ma... 42 5e-06 4
AF310896|AF310896.1 Dictyostelium discoideum RacJ (racJ) gen... 42 8e-06 4
CN753884|CN753884.1 ID0AAA11BG07RM1 ApMS Acyrthosiphon pisum... 54 2e-05 2
CR384086|CR384086.3 Zebrafish DNA sequence *** SEQUENCING IN... 48 2e-05 3
CR386312|CR386312.1 Gallus gallus finished cDNA, clone ChEST... 50 2e-05 2
AC115584|AC115584.2 Dictyostelium discoideum chromosome 2 ma... 44 4e-05 5
CR855131|CR855131.2 Zebrafish DNA sequence *** SEQUENCING IN... 42 4e-05 4
AF140273|AF140273.1 Ichthyophthirius multifiliis immobilizat... 48 5e-05 3
AC107021|AC107021.4 Homo sapiens 3 BAC RP11-274H2 (Roswell P... 44 5e-05 2
BH515730|BH515730.1 BOGVH51TR BOGV Brassica oleracea genomic... 46 6e-05 2
AL590457|AL590457.2 S.pombe chromosome III BAC pB5A12. 42 7e-05 2
CR732866|CR732866.1 Gallus gallus finished cDNA, clone ChEST... 44 7e-05 2
AC084776|AC084776.1 Homo sapiens clone RP11-634M16, LOW-PASS... 42 8e-05 2
AL499606|AL499606.18 Human DNA sequence from clone RP11-13J1... 42 8e-05 2
AF024654|AF024654.1 Dictyostelium discoideum hybrid histidin... 34 9e-05 4
AY484461|AY484461.1 Dictyostelium discoideum kinesin family ... 40 1e-04 2
CR392359|CR392359.3 Zebrafish DNA sequence *** SEQUENCING IN... 42 1e-04 3
CR936398|CR936398.3 Zebrafish DNA sequence *** SEQUENCING IN... 52 1e-04 3
AP000588|AP000588.3 Homo sapiens genomic DNA, chromosome 11q... 42 1e-04 2
AC115680|AC115680.3 Dictyostelium discoideum chromosome 2 ma... 40 1e-04 4
AC006405|AC006405.1 Homo sapiens chromosome 17 clone hRPK.10... 42 2e-04 3
AC115588|AC115588.2 Dictyostelium discoideum chromosome 2 ma... 46 2e-04 5
AC116330|AC116330.2 Dictyostelium discoideum chromosome 2 ma... 42 2e-04 4
BH662753|BH662753.1 BOMIS25TR BO_2_3_KB Brassica oleracea ge... 42 2e-04 2
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ... 42 2e-04 4
AC123513|AC123513.1 Dictyostelium discoideum chromosome 2 ma... 42 2e-04 4
AE014817|AE014817.1 Plasmodium falciparum 3D7 chromosome 14 ... 44 2e-04 4
AC087632|AC087632.10 Homo sapiens chromosome 15, clone RP11-... 42 2e-04 4
AC127457|AC127457.3 Homo sapiens chromosome 16 clone RP11-10... 42 2e-04 3
AC108685|AC108685.4 Homo sapiens X BAC RP11-323F16 (Roswell ... 42 2e-04 3
CF084550|CF084550.1 QHL3B17.yg.ab1 QH_L sunflower H.paradoxu... 44 2e-04 2
AC155789|AC155789.2 Papio anubis clone RP41-371I22, WORKING ... 42 2e-04 4
AL489314|AL489314.1 T. brucei sheared genomic DNA clone 310c... 38 2e-04 2
AL450023|AL450023.21 Human DNA sequence from clone RP11-552J... 42 2e-04 3
AC126406|AC126406.3 Homo sapiens chromosome 17 clone RP11-43... 42 2e-04 3
BZ438631|BZ438631.1 BONJZ87TF BO_1.6_2_KB_tot Brassica olera... 42 2e-04 2
BH473923|BH473923.1 BOHSI18TR BOHS Brassica oleracea genomic... 42 2e-04 2
BH704908|BH704908.1 BOHZU08TR BO_2_3_KB Brassica oleracea ge... 40 2e-04 2
BH945474|BH945474.1 obv14d05.g1 B.oleracea002 Brassica olera... 40 2e-04 2
BX185928|BX185928.1 Danio rerio genomic clone DKEY-196K14, g... 38 2e-04 2
BH654237|BH654237.1 BOMNX86TR BO_2_3_KB Brassica oleracea ge... 42 2e-04 2
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 44 3e-04 4
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma... 42 3e-04 4
BH728960|BH728960.1 BOMOL44TR BO_2_3_KB Brassica oleracea ge... 40 3e-04 2
AF482380|AF482380.1 Dictyostelium discoideum ABC transporter... 42 3e-04 3
BX180348|BX180348.1 Danio rerio genomic clone DKEY-180K11, g... 48 3e-04 2
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 46 3e-04 4
AC115592|AC115592.2 Dictyostelium discoideum chromosome 2 ma... 42 3e-04 4
AC099676|AC099676.2 Homo sapiens chromosome 1 clone RP11-465... 42 3e-04 4
AL391815|AL391815.6 Human DNA sequence from clone RP11-223L2... 42 4e-04 3
BH151560|BH151560.1 ENTPV31TF Entamoeba histolytica Sheared ... 36 4e-04 3
AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo... 42 4e-04 4
AL034557|AL034557.8 Plasmodium falciparum MAL4P1. 44 4e-04 4
AC117080|AC117080.2 Dictyostelium discoideum chromosome 2 ma... 42 4e-04 4
BK001612|BK001612.1 TPA: Apis mellifera troponin C type IIIb... 44 4e-04 2
AF015416|AF015416.1 Homo sapiens chromosome 11 from 11p15.5 ... 42 5e-04 4
AC116924|AC116924.3 Dictyostelium discoideum chromosome 2 ma... 42 5e-04 4
BX537109|BX537109.13 Zebrafish DNA sequence from clone DKEY-... 42 5e-04 4
AC010102|AC010102.3 Homo sapiens BAC clone RP11-486B15 from ... 40 5e-04 4
AC134670|AC134670.3 Homo sapiens chromosome 17, clone CTD-22... 42 5e-04 3
AC148838|AC148838.2 Pan troglodytes clone CH251-91L6, WORKIN... 42 5e-04 4
AL929329|AL929329.2 Zebrafish DNA sequence from clone BUSM1-... 42 5e-04 3
AC112358|AC112358.3 Rattus norvegicus clone CH230-248B1, WOR... 44 5e-04 4
AC115682|AC115682.2 Dictyostelium discoideum chromosome 2 ma... 42 5e-04 4
AF300334|AF300334.1 Dictyostelium discoideum putative transc... 46 5e-04 4
CA856190|CA856190.1 PfESToac58b03.y1 Plasmodium falciparum 3... 42 5e-04 2
CE184444|CE184444.1 tigr-gss-dog-17000308638437 Dog Library ... 54 5e-04 1
AL929096|AL929096.5 Zebrafish DNA sequence from clone DKEY-2... 54 5e-04 1
CR352297|CR352297.13 Zebrafish DNA sequence from clone CH211... 54 5e-04 1
AC159433|AC159433.1 Trypanosoma brucei chromosome 7 clone RP... 40 6e-04 4
AJ005398|AJ005398.1 Dictyostelium discoideum regA gene. 42 6e-04 3
CR352215|CR352215.21 Zebrafish DNA sequence *** SEQUENCING I... 38 6e-04 4
CA856366|CA856366.1 PfESToac60a02.y1 Plasmodium falciparum 3... 42 6e-04 2
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 46 6e-04 4
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma... 46 6e-04 4
AC025605|AC025605.2 Homo sapiens chromosome 7 clone RP11-145... 42 6e-04 4
CR450810|CR450810.1 Zebrafish DNA sequence *** SEQUENCING IN... 36 7e-04 4
AL353662|AL353662.19 Human DNA sequence from clone RP11-571F... 44 7e-04 4
CR388006|CR388006.8 Zebrafish DNA sequence *** SEQUENCING IN... 44 8e-04 2
CR925788|CR925788.1 Zebrafish DNA sequence *** SEQUENCING IN... 42 8e-04 3
AL049175|AL049175.12 Human DNA sequence from clone RP5-1110P... 44 8e-04 2
X51892|X51892.1 Dictyostelium discoideum SP60 gene for spore... 48 8e-04 2
BX936404|BX936404.7 Zebrafish DNA sequence *** SEQUENCING IN... 40 8e-04 4
AY047363|AY047363.1 Dictyostelium discoideum cGMP-stimulated... 40 8e-04 4
AC138734|AC138734.1 Papio anubis clone RP41-45M14, WORKING D... 42 8e-04 4
DD010735|DD010735.1 Diagnosis of known genetic Parameters wi... 48 9e-04 3
AL954188|AL954188.10 Zebrafish DNA sequence from clone DKEY-... 52 9e-04 3
Z97199|Z97199.5 Human DNA sequence *** SEQUENCING CANCELLED ... 42 9e-04 4
AC093414|AC093414.3 Homo sapiens chromosome 3 clone RP11-193... 36 0.001 4
Z98547|Z98547.2 Plasmodium falciparum MAL3P3. 42 0.001 4
AC025521|AC025521.20 Homo sapiens chromosome 17, clone RP11-... 42 0.001 4
AX346943|AX346943.1 Sequence 2014 from Patent WO0200928. 42 0.001 3
AX251486|AX251486.1 Sequence 454 from Patent WO0168912. 42 0.001 3
BD453007|BD453007.1 Diagnosis of Diseases Associated with tu... 42 0.001 3
AC145284|AC145284.1 Homo sapiens chromosome 16 clone RP11-13... 36 0.001 4
AC117072|AC117072.3 Dictyostelium discoideum chromosome 2 ma... 46 0.001 4
AL356458|AL356458.13 Human DNA sequence from clone RP4-666O2... 42 0.001 3
AJ007904|AJ007904.1 Trypanosoma brucei mRNA for trans-splici... 42 0.001 2
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma... 42 0.001 4
AF310886|AF310886.1 Dictyostelium discoideum RacA (racA) gen... 42 0.001 3
>AC117073|AC117073.2 Dictyostelium discoideum chromosome 2 map
6045872-6061342 strain AX4, complete sequence.
Length = 15470
Score = 42.1 bits (21), Expect = 2.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 49 tattattattatttttttttt 69
|||||||||||||||||||||
Sbjct: 10547 tattattattatttttttttt 10527
Score = 42.1 bits (21), Expect = 2.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tattattattatttttttttt 69
|||||||||||||||||||||
Sbjct: 8608 tattattattatttttttttt 8628
Score = 42.1 bits (21), Expect = 2.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tattattattatttttttttt 69
|||||||||||||||||||||
Sbjct: 5159 tattattattatttttttttt 5179
Score = 40.1 bits (20), Expect(3) = 0.22
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tattattattattttttttt 68
||||||||||||||||||||
Sbjct: 8416 tattattattattttttttt 8435
Score = 34.2 bits (17), Expect(4) = 5e-06
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 49 tattattattatttttt 65
|||||||||||||||||
Sbjct: 7485 tattattattatttttt 7501
Score = 34.2 bits (17), Expect(4) = 0.095
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 59 attttttttttaaattt 75
|||||||||||||||||
Sbjct: 11057 attttttttttaaattt 11041
Score = 32.2 bits (16), Expect(4) = 1.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 60 ttttttttttaaattt 75
||||||||||||||||
Sbjct: 4190 ttttttttttaaattt 4175
Score = 32.2 bits (16), Expect(4) = 5e-06
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 60 ttttttttttaaattt 75
||||||||||||||||
Sbjct: 12628 ttttttttttaaattt 12613
Score = 32.2 bits (16), Expect(4) = 0.028
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 60 ttttttttttaaattt 75
||||||||||||||||
Sbjct: 9486 ttttttttttaaattt 9471
Score = 32.2 bits (16), Expect(4) = 5e-06
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 60 ttttttttttaaattt 75
||||||||||||||||
Sbjct: 11357 ttttttttttaaattt 11372
Score = 32.2 bits (16), Expect(3) = 9.1
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 49 tattattattattttttttt 68
||||||||||||||| ||||
Sbjct: 15009 tattattattattttatttt 14990
Score = 32.2 bits (16), Expect(4) = 5e-06
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 49 tattattattattttt 64
||||||||||||||||
Sbjct: 13680 tattattattattttt 13665
Score = 30.2 bits (15), Expect(3) = 2.6
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 49 tattattattatttt 63
|||||||||||||||
Sbjct: 2494 tattattattatttt 2480
Score = 30.2 bits (15), Expect(3) = 2.6
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 60 ttttttttttaaatt 74
|||||||||||||||
Sbjct: 260 ttttttttttaaatt 274
Score = 28.2 bits (14), Expect(4) = 3.4
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 57 ttatttttttttta 70
||||||||||||||
Sbjct: 10038 ttatttttttttta 10025
Score = 28.2 bits (14), Expect(4) = 3.4
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 49 tattattattattt 62
||||||||||||||
Sbjct: 6719 tattattattattt 6732
Score = 28.2 bits (14), Expect(3) = 9.1
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 57 ttatttttttttta 70
||||||||||||||
Sbjct: 13957 ttatttttttttta 13970
Score = 28.2 bits (14), Expect(4) = 0.028
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 51 ttattattattttt 64
||||||||||||||
Sbjct: 9846 ttattattattttt 9833
Score = 28.2 bits (14), Expect(4) = 0.028
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 60 ttttttttttaaat 73
||||||||||||||
Sbjct: 7703 ttttttttttaaat 7716
Score = 28.2 bits (14), Expect(3) = 2.6
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 59 attttttttttaaa 72
||||||||||||||
Sbjct: 2163 attttttttttaaa 2150
Score = 28.2 bits (14), Expect(4) = 0.028
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 49 tattattattattt 62
||||||||||||||
Sbjct: 5780 tattattattattt 5793
Score = 28.2 bits (14), Expect(4) = 0.095
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 57 ttatttttttttta 70
||||||||||||||
Sbjct: 8386 ttatttttttttta 8399
Score = 26.3 bits (13), Expect(4) = 1.1
Identities = 16/17 (94%)
Strand = Plus / Minus
Query: 50 attattattattttttt 66
|||||||||||| ||||
Sbjct: 15011 attattattattatttt 14995
Score = 26.3 bits (13), Expect(4) = 3.4
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 60 ttttttttttaaa 72
|||||||||||||
Sbjct: 8000 ttttttttttaaa 8012
Score = 26.3 bits (13), Expect(4) = 1.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 63 tttttttaaattt 75
|||||||||||||
Sbjct: 4168 tttttttaaattt 4180
Score = 26.3 bits (13), Expect(4) = 1.1
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 51 ttattattatttttttt 67
||||| |||||||||||
Sbjct: 3708 ttatttttatttttttt 3724
Score = 26.3 bits (13), Expect(3) = 9.1
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 49 tattattattatt 61
|||||||||||||
Sbjct: 5774 tattattattatt 5786
Score = 26.3 bits (13), Expect(3) = 0.22
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 49 tattattattatt 61
|||||||||||||
Sbjct: 14550 tattattattatt 14538
Score = 26.3 bits (13), Expect(3) = 0.22
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 57 ttatttttttttt 69
|||||||||||||
Sbjct: 10944 ttatttttttttt 10932
Score = 26.3 bits (13), Expect(4) = 3.4
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 49 tattattattatt 61
|||||||||||||
Sbjct: 13662 tattattattatt 13650
Score = 26.3 bits (13), Expect(4) = 0.095
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 49 tattattattatt 61
|||||||||||||
Sbjct: 14592 tattattattatt 14580
Score = 26.3 bits (13), Expect(4) = 0.095
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 49 tattattattatt 61
|||||||||||||
Sbjct: 4525 tattattattatt 4537
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 15,726,803
Number of Sequences: 40437674
Number of extensions: 15726803
Number of successful extensions: 7647922
Number of sequences better than 10.0: 21621
length of query: 132
length of database: ],876,986,368
effective HSP length: 21
effective length of query: 111
effective length of database: ],027,795,214
effective search space: 4998085268754
effective search space used: 4998085268754
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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| Homology vs Protein |
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