Contig-U15353-1
Contig ID Contig-U15353-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15353-1 (Contig-U15353-1Q) /CSM_Contig/Contig-U15353-1Q.Seq.d
AATTTTATAAATAATTAAACAACAACAACAACAACAACAACAACAAAAAC
AACAACAACAGTTTTTACTTTATATTTTTTATTGTTGTAATAAGAAAATA
AAACTATAAATTAAATATATTTTTTAATATCCTTTTTTTATTTAAATATA
ATAATAATAATAATACAAATATATATAAATTCAATTTCTTGTCATAAAAA
ATAATGGATAGAAATGAAGGGGGTGATTTCCCAATAAACACCCCTAATAA
TATAAATAGTAGTGGGGGTAGTTATAATAGTAGTATGAATAATAGTAGTA
ATAATATTGGTAGAGATATTGGTAATAATCAAAGTAGTAGAAATTTAAAA
CCAAAACCATCACAAAGCAATTTGAAATGGATAGCAAGAGATTTAAAAAA
GAAATCTGTTAGAAAAGATTCAGAGAGAAAGTTAAAGAGTAGTGGTGTTT
TAAAGAAAAAGAATACTGTGATGGACTTTGGTGAAGATGATGGTGGTAGT
GGTGACGATGGTAATATAACCCGAAGGTTTACCAATTAGTGAAGGTATGG
ATGATTTACCATCATCTTCAAACTCTCGTGGCGGCAGCGGTAATGATGAA
C

Gap no gap
Contig length 601
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3499451
End point 3498851
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U15353
List of clone(s)

est1=CHL727F,1,601
est2=CHL465F,7,538
Translated Amino Acid sequence
fyk*lnnnnnnnnnknnnnsfyfiffivvirk*nyklniffnilflfkynnnnntniykf
nfls*KIMDRNEGGDFPINTPNNINSSGGSYNSSMNNSSNNIGRDIGNNQSSRNLKPKPS
QSNLKWIARDLKKKSVRKDSERKLKSSGVLKKKNTVMDFGEDDGGSGDDGNITRRFTN**
ryg*ftiifklswrqr***


Translated Amino Acid sequence (All Frames)
Frame A:
nfinn*tttttttttkttttvftlyflll**enktin*iyflisffylniiiiiiqiyin
sischkk*wiemkgvisq*tplii*ivvgvviivv*iivviilveilviikvvei*nqnh
hkai*ng*qei*krnllekiqres*rvvvf*rkril*wtlvkmmvvvvtmvi*peglpis
egmddlpsssnsrggsgnde


Frame B:
il*iikqqqqqqqqqkqqqqfllyifyccnkkikl*ikyif*ypffi*i*****ykyi*i
qflviknng*k*rg*fpnkhp**yk**wg*l***ye*****yw*ryw**sk**kfktkti
tkqfemdskrfkkeic*krfrekvke*wcfkekeycdglw*r*ww*w*rw*ynpkvyqlv
kvwmiyhhlqtlvaaavmmn


Frame C:
fyk*lnnnnnnnnnknnnnsfyfiffivvirk*nyklniffnilflfkynnnnntniykf
nfls*KIMDRNEGGDFPINTPNNINSSGGSYNSSMNNSSNNIGRDIGNNQSSRNLKPKPS
QSNLKWIARDLKKKSVRKDSERKLKSSGVLKKKNTVMDFGEDDGGSGDDGNITRRFTN**
ryg*ftiifklswrqr***


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15353-1 (Contig-U15353-1Q)
/CSM_Contig/Contig-U15353-1Q.Seq.d
(601 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16361-1 (Contig-U16361-1Q) /CSM_Contig/Conti... 571 e-163
Contig-U15353-1 (Contig-U15353-1Q) /CSM_Contig/Conti... 571 e-163
Contig-U13278-1 (Contig-U13278-1Q) /CSM_Contig/Conti... 412 e-115
Contig-U13114-1 (Contig-U13114-1Q) /CSM_Contig/Conti... 230 2e-60
Contig-U14388-1 (Contig-U14388-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U13241-1 (Contig-U13241-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U04933-1 (Contig-U04933-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U16083-1 (Contig-U16083-1Q) /CSM_Contig/Conti... 36 0.060
Contig-U15713-1 (Contig-U15713-1Q) /CSM_Contig/Conti... 36 0.060
Contig-U13903-1 (Contig-U13903-1Q) /CSM_Contig/Conti... 36 0.060

>Contig-U16361-1 (Contig-U16361-1Q) /CSM_Contig/Contig-U16361-1Q.Seq.d
Length = 3909

Score = 571 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Plus


Query: 314 agatattggtaataatcaaagtagtagaaatttaaaaccaaaaccatcacaaagcaattt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agatattggtaataatcaaagtagtagaaatttaaaaccaaaaccatcacaaagcaattt 692


Query: 374 gaaatggatagcaagagatttaaaaaagaaatctgttagaaaagattcagagagaaagtt 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gaaatggatagcaagagatttaaaaaagaaatctgttagaaaagattcagagagaaagtt 752


Query: 434 aaagagtagtggtgttttaaagaaaaagaatactgtgatggactttggtgaagatgatgg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aaagagtagtggtgttttaaagaaaaagaatactgtgatggactttggtgaagatgatgg 812


Query: 494 tggtagtggtgacgatggtaatataacccgaaggtttaccaattagtgaaggtatggatg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tggtagtggtgacgatggtaatataacccgaaggtttaccaattagtgaaggtatggatg 872


Query: 554 atttaccatcatcttcaaactctcgtggcggcagcggtaatgatgaac 601
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 atttaccatcatcttcaaactctcgtggcggcagcggtaatgatgaac 920


Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus


Query: 181 tcaatttcttgtcataaaaaataatggatagaaatgaagggggtgatttcccaataaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcaatttcttgtcataaaaaataatggatagaaatgaagggggtgatttcccaataaaca 559


Query: 241 cccctaataat 251
|||||||||||
Sbjct: 560 cccctaataat 570


Score = 50.1 bits (25), Expect = 4e-06
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus


Query: 62 tttttactttata-ttttttattgttgtaataa 93
||||||||||||| |||||||||||||||||||
Sbjct: 342 tttttactttatatttttttattgttgtaataa 374


>Contig-U15353-1 (Contig-U15353-1Q) /CSM_Contig/Contig-U15353-1Q.Seq.d
Length = 601

Score = 571 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Plus


Query: 314 agatattggtaataatcaaagtagtagaaatttaaaaccaaaaccatcacaaagcaattt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agatattggtaataatcaaagtagtagaaatttaaaaccaaaaccatcacaaagcaattt 373


Query: 374 gaaatggatagcaagagatttaaaaaagaaatctgttagaaaagattcagagagaaagtt 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaaatggatagcaagagatttaaaaaagaaatctgttagaaaagattcagagagaaagtt 433


Query: 434 aaagagtagtggtgttttaaagaaaaagaatactgtgatggactttggtgaagatgatgg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aaagagtagtggtgttttaaagaaaaagaatactgtgatggactttggtgaagatgatgg 493


Query: 494 tggtagtggtgacgatggtaatataacccgaaggtttaccaattagtgaaggtatggatg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tggtagtggtgacgatggtaatataacccgaaggtttaccaattagtgaaggtatggatg 553


Query: 554 atttaccatcatcttcaaactctcgtggcggcagcggtaatgatgaac 601
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atttaccatcatcttcaaactctcgtggcggcagcggtaatgatgaac 601


Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus


Query: 181 tcaatttcttgtcataaaaaataatggatagaaatgaagggggtgatttcccaataaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaatttcttgtcataaaaaataatggatagaaatgaagggggtgatttcccaataaaca 240


Query: 241 cccctaataat 251
|||||||||||
Sbjct: 241 cccctaataat 251


Score = 65.9 bits (33), Expect = 7e-11
Identities = 33/33 (100%)
Strand = Plus / Plus


Query: 61 gtttttactttatattttttattgttgtaataa 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 gtttttactttatattttttattgttgtaataa 93


Score = 34.2 bits (17), Expect = 0.24
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1 aattttataaataatta 17
|||||||||||||||||
Sbjct: 1 aattttataaataatta 17


>Contig-U13278-1 (Contig-U13278-1Q) /CSM_Contig/Contig-U13278-1Q.Seq.d
Length = 595

Score = 412 bits (208), Expect = e-115
Identities = 208/208 (100%)
Strand = Plus / Plus


Query: 314 agatattggtaataatcaaagtagtagaaatttaaaaccaaaaccatcacaaagcaattt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agatattggtaataatcaaagtagtagaaatttaaaaccaaaaccatcacaaagcaattt 438


Query: 374 gaaatggatagcaagagatttaaaaaagaaatctgttagaaaagattcagagagaaagtt 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gaaatggatagcaagagatttaaaaaagaaatctgttagaaaagattcagagagaaagtt 498


Query: 434 aaagagtagtggtgttttaaagaaaaagaatactgtgatggactttggtgaagatgatgg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaagagtagtggtgttttaaagaaaaagaatactgtgatggactttggtgaagatgatgg 558


Query: 494 tggtagtggtgacgatggtaatataacc 521
||||||||||||||||||||||||||||
Sbjct: 559 tggtagtggtgacgatggtaatataacc 586


Score = 141 bits (71), Expect = 1e-33
Identities = 71/71 (100%)
Strand = Plus / Plus


Query: 181 tcaatttcttgtcataaaaaataatggatagaaatgaagggggtgatttcccaataaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tcaatttcttgtcataaaaaataatggatagaaatgaagggggtgatttcccaataaaca 305


Query: 241 cccctaataat 251
|||||||||||
Sbjct: 306 cccctaataat 316


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,916
Number of Sequences: 8402
Number of extensions: 14916
Number of successful extensions: 1764
Number of sequences better than 10.0: 213
length of query: 601
length of database: 8,075,542
effective HSP length: 16
effective length of query: 585
effective length of database: 7,941,110
effective search space: 4645549350
effective search space used: 4645549350
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.24
Homology vs DNA
Query= Contig-U15353-1 (Contig-U15353-1Q) /CSM_Contig/Contig-U15353-1Q.Seq.d
(601 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ394759) Dictyostelium discoideum cDNA clone:dds36j12, 5' ... 539 e-161 3
(BJ397417) Dictyostelium discoideum cDNA clone:dds46p06, 5' ... 537 e-161 3
(BJ393556) Dictyostelium discoideum cDNA clone:dds31b20, 5' ... 537 e-161 3
(BJ369817) Dictyostelium discoideum cDNA clone:ddc51k20, 5' ... 537 e-161 3
(BJ368526) Dictyostelium discoideum cDNA clone:ddc47f03, 5' ... 531 e-159 3
(BJ396508) Dictyostelium discoideum cDNA clone:dds42n01, 5' ... 529 e-158 3
(BJ396175) Dictyostelium discoideum cDNA clone:dds41k18, 5' ... 539 e-158 2
(BJ396330) Dictyostelium discoideum cDNA clone:dds42d18, 5' ... 539 e-158 2
(BJ397370) Dictyostelium discoideum cDNA clone:dds46e04, 5' ... 539 e-158 2
(BJ395798) Dictyostelium discoideum cDNA clone:dds40o02, 5' ... 539 e-158 2
(BJ336478) Dictyostelium discoideum cDNA clone:dda54f03, 5' ... 539 e-158 2
(BJ395815) Dictyostelium discoideum cDNA clone:dds40e07, 5' ... 539 e-158 2
(BJ366869) Dictyostelium discoideum cDNA clone:ddc40d16, 5' ... 539 e-158 2
(BJ368101) Dictyostelium discoideum cDNA clone:ddc45f07, 5' ... 381 e-155 4
(BJ370765) Dictyostelium discoideum cDNA clone:ddc55g07, 5' ... 381 e-155 4
(BJ391828) Dictyostelium discoideum cDNA clone:dds25h10, 5' ... 381 e-155 4
(BJ364439) Dictyostelium discoideum cDNA clone:ddc31p17, 5' ... 381 e-155 4
(BJ396040) Dictyostelium discoideum cDNA clone:dds41l05, 5' ... 381 e-155 4
(BJ392714) Dictyostelium discoideum cDNA clone:dds28m18, 5' ... 381 e-155 4
(BJ369205) Dictyostelium discoideum cDNA clone:ddc49o15, 5' ... 381 e-155 4
(BJ396917) Dictyostelium discoideum cDNA clone:dds44n10, 5' ... 381 e-155 4
(BJ396761) Dictyostelium discoideum cDNA clone:dds43h24, 5' ... 381 e-155 4
(BJ394281) Dictyostelium discoideum cDNA clone:dds34b18, 5' ... 381 e-155 4
(BJ371099) Dictyostelium discoideum cDNA clone:ddc56l16, 5' ... 381 e-154 4
(BJ365874) Dictyostelium discoideum cDNA clone:ddc36l19, 5' ... 381 e-154 4
(BJ392204) Dictyostelium discoideum cDNA clone:dds26d20, 5' ... 525 e-154 2
(AF163835) Dictyostelium discoideum cellulose synthase (dcsA... 381 e-153 4
(BJ392425) Dictyostelium discoideum cDNA clone:dds27j14, 5' ... 381 e-152 3
(BJ366283) Dictyostelium discoideum cDNA clone:ddc38n07, 5' ... 381 e-152 3
(BJ337512) Dictyostelium discoideum cDNA clone:dda57p18, 5' ... 381 e-152 3
(BJ367730) Dictyostelium discoideum cDNA clone:ddc43d23, 5' ... 381 e-152 3
(BJ336987) Dictyostelium discoideum cDNA clone:dda55i23, 5' ... 381 e-152 3
(BJ393314) Dictyostelium discoideum cDNA clone:dds30k23, 5' ... 381 e-152 3
(BJ337681) Dictyostelium discoideum cDNA clone:dda58h07, 5' ... 381 e-152 3
(BJ395666) Dictyostelium discoideum cDNA clone:dds39p16, 5' ... 381 e-152 3
(BJ332450) Dictyostelium discoideum cDNA clone:dda39m01, 5' ... 381 e-152 3
(BJ334336) Dictyostelium discoideum cDNA clone:dda45p23, 5' ... 381 e-152 3
(BJ364496) Dictyostelium discoideum cDNA clone:ddc31n24, 5' ... 381 e-152 3
(BJ396995) Dictyostelium discoideum cDNA clone:dds44n17, 5' ... 381 e-152 3
(BJ336650) Dictyostelium discoideum cDNA clone:dda54k18, 5' ... 381 e-152 3
(BJ397555) Dictyostelium discoideum cDNA clone:dds46a23, 5' ... 381 e-152 3
(BJ392647) Dictyostelium discoideum cDNA clone:dds28m11, 5' ... 381 e-152 3
(BJ370760) Dictyostelium discoideum cDNA clone:ddc55f07, 5' ... 381 e-152 3
(BJ393660) Dictyostelium discoideum cDNA clone:dds32k02, 5' ... 507 e-152 3
(BJ397002) Dictyostelium discoideum cDNA clone:dds44p17, 5' ... 381 e-152 3
(BJ366454) Dictyostelium discoideum cDNA clone:ddc39d03, 5' ... 381 e-152 3
(BJ393963) Dictyostelium discoideum cDNA clone:dds33e12, 5' ... 381 e-152 3
(BJ370210) Dictyostelium discoideum cDNA clone:ddc53f10, 5' ... 381 e-152 3
(BJ392367) Dictyostelium discoideum cDNA clone:dds27k11, 5' ... 381 e-152 3
(BJ396127) Dictyostelium discoideum cDNA clone:dds41p08, 5' ... 381 e-152 3
(BJ370075) Dictyostelium discoideum cDNA clone:ddc52e05, 5' ... 381 e-152 3
(BJ336377) Dictyostelium discoideum cDNA clone:dda53n14, 5' ... 381 e-152 3
(BJ392699) Dictyostelium discoideum cDNA clone:dds28i18, 5' ... 381 e-150 3
(BJ365879) Dictyostelium discoideum cDNA clone:ddc36m20, 5' ... 381 e-150 3
(BJ339064) Dictyostelium discoideum cDNA clone:dda64b06, 5' ... 381 e-150 5
(BJ369239) Dictyostelium discoideum cDNA clone:ddc49f22, 5' ... 373 e-149 3
(BJ370299) Dictyostelium discoideum cDNA clone:ddc53k17, 5' ... 373 e-149 3
(BJ370107) Dictyostelium discoideum cDNA clone:ddc52m05, 5' ... 373 e-149 3
(BJ393409) Dictyostelium discoideum cDNA clone:dds31a07, 5' ... 373 e-149 3
(BJ369940) Dictyostelium discoideum cDNA clone:ddc52f17, 5' ... 381 e-143 2
(BJ370872) Dictyostelium discoideum cDNA clone:ddc55d20, 5' ... 381 e-143 2
(BJ364536) Dictyostelium discoideum cDNA clone:ddc32g03, 5' ... 381 e-143 2
(BJ332094) Dictyostelium discoideum cDNA clone:dda37o02, 5' ... 381 e-143 2
(BJ392002) Dictyostelium discoideum cDNA clone:dds26c02, 5' ... 381 e-143 2
(BJ369032) Dictyostelium discoideum cDNA clone:ddc49d06, 5' ... 381 e-143 2
(BJ394225) Dictyostelium discoideum cDNA clone:dds34f12, 5' ... 381 e-143 2
(BJ338151) Dictyostelium discoideum cDNA clone:dda60e09, 5' ... 381 e-143 2
(BJ339161) Dictyostelium discoideum cDNA clone:dda64j11, 5' ... 381 e-143 2
(BJ392210) Dictyostelium discoideum cDNA clone:dds26e21, 5' ... 381 e-143 2
(BJ368210) Dictyostelium discoideum cDNA clone:ddc45c20, 5' ... 381 e-143 2
(BJ338951) Dictyostelium discoideum cDNA clone:dda63i18, 5' ... 381 e-143 2
(BJ369446) Dictyostelium discoideum cDNA clone:ddc50i14, 5' ... 381 e-143 2
(BJ396961) Dictyostelium discoideum cDNA clone:dds44g15, 5' ... 381 e-142 4
(BJ391948) Dictyostelium discoideum cDNA clone:dds25e23, 5' ... 377 e-142 2
(BJ392211) Dictyostelium discoideum cDNA clone:dds26e23, 5' ... 375 e-141 2
(BJ392685) Dictyostelium discoideum cDNA clone:dds28e18, 5' ... 381 e-141 2
(BJ395433) Dictyostelium discoideum cDNA clone:dds38i19, 5' ... 381 e-141 2
(BJ335456) Dictyostelium discoideum cDNA clone:dda50e09, 5' ... 373 e-141 2
(AU061082) Dictyostelium discoideum slug cDNA, clone SLC874. 381 e-140 3
(BJ367848) Dictyostelium discoideum cDNA clone:ddc44c16, 5' ... 369 e-140 2
(BJ393910) Dictyostelium discoideum cDNA clone:dds33h04, 5' ... 363 e-138 2
(BJ335276) Dictyostelium discoideum cDNA clone:dda49h18, 5' ... 363 e-138 2
(BJ394109) Dictyostelium discoideum cDNA clone:dds33g24, 5' ... 264 e-137 3
(BJ338446) Dictyostelium discoideum cDNA clone:dda61f13, 5' ... 361 e-137 2
(BJ333780) Dictyostelium discoideum cDNA clone:dda44b03, 5' ... 381 e-136 4
(BJ366246) Dictyostelium discoideum cDNA clone:ddc38d11, 5' ... 355 e-135 2
(BJ394061) Dictyostelium discoideum cDNA clone:dds33l13, 5' ... 381 e-132 3
(BJ394117) Dictyostelium discoideum cDNA clone:dds33i21, 5' ... 182 e-129 4
(BJ370043) Dictyostelium discoideum cDNA clone:ddc52n24, 5' ... 190 e-126 4
(BJ368341) Dictyostelium discoideum cDNA clone:ddc46f08, 5' ... 381 e-126 5
(BJ366530) Dictyostelium discoideum cDNA clone:ddc39f10, 5' ... 414 e-124 3
(BJ393819) Dictyostelium discoideum cDNA clone:dds32b20, 5' ... 414 e-124 3
(BJ394711) Dictyostelium discoideum cDNA clone:dds36p04, 5' ... 412 e-123 3
(BJ364348) Dictyostelium discoideum cDNA clone:ddc31l07, 5' ... 412 e-123 3
(BJ364288) Dictyostelium discoideum cDNA clone:ddc31m05, 5' ... 412 e-123 3
(BJ364784) Dictyostelium discoideum cDNA clone:ddc32p20, 5' ... 410 e-123 3
(BJ368037) Dictyostelium discoideum cDNA clone:ddc45e02, 5' ... 408 e-122 3
(BJ392471) Dictyostelium discoideum cDNA clone:dds27d20, 5' ... 408 e-122 3
(BJ394973) Dictyostelium discoideum cDNA clone:dds37o04, 5' ... 406 e-122 3
(BJ336718) Dictyostelium discoideum cDNA clone:dda54k21, 5' ... 416 e-121 2
(BJ392712) Dictyostelium discoideum cDNA clone:dds28m15, 5' ... 285 e-121 4
(BJ396313) Dictyostelium discoideum cDNA clone:dds42a17, 5' ... 414 e-121 2
(BJ392187) Dictyostelium discoideum cDNA clone:dds26p15, 5' ... 402 e-120 3
(BJ364454) Dictyostelium discoideum cDNA clone:ddc31d19, 5' ... 303 e-120 2
(BJ368578) Dictyostelium discoideum cDNA clone:ddc47c12, 5' ... 410 e-120 2
(BJ367846) Dictyostelium discoideum cDNA clone:ddc44b18, 5' ... 406 e-118 2
(BJ365397) Dictyostelium discoideum cDNA clone:ddc35a11, 5' ... 406 e-118 2
(BJ397206) Dictyostelium discoideum cDNA clone:dds45p07, 5' ... 381 e-118 4
(BJ369005) Dictyostelium discoideum cDNA clone:ddc48m23, 5' ... 381 e-118 4
(BJ396036) Dictyostelium discoideum cDNA clone:dds41k02, 5' ... 381 e-118 4
(BJ395305) Dictyostelium discoideum cDNA clone:dds38l08, 5' ... 381 e-118 4
(BJ332169) Dictyostelium discoideum cDNA clone:dda38p01, 5' ... 392 e-117 3
(BJ394648) Dictyostelium discoideum cDNA clone:dds36b04, 5' ... 381 e-117 4
(BJ367359) Dictyostelium discoideum cDNA clone:ddc42l10, 5' ... 293 e-117 2
(BJ370963) Dictyostelium discoideum cDNA clone:ddc56j01, 5' ... 293 e-117 2
(BJ395675) Dictyostelium discoideum cDNA clone:dds39b24, 5' ... 381 e-116 4
(BJ331632) Dictyostelium discoideum cDNA clone:dda36o09, 5' ... 381 e-116 4
(BJ396236) Dictyostelium discoideum cDNA clone:dds41l20, 5' ... 381 e-116 4
(BJ397328) Dictyostelium discoideum cDNA clone:dds45l21, 5' ... 373 e-115 4
(BJ331333) Dictyostelium discoideum cDNA clone:dda34l20, 5' ... 381 e-115 3
(BJ391879) Dictyostelium discoideum cDNA clone:dds25e15, 5' ... 381 e-115 3
(BJ366367) Dictyostelium discoideum cDNA clone:ddc38p16, 5' ... 381 e-115 3
(BJ396801) Dictyostelium discoideum cDNA clone:dds44b06, 5' ... 381 e-115 3
(BJ331424) Dictyostelium discoideum cDNA clone:dda35f09, 5' ... 381 e-114 3
(BJ394835) Dictyostelium discoideum cDNA clone:dds36n13, 5' ... 381 e-114 3
(BJ396505) Dictyostelium discoideum cDNA clone:dds42m02, 5' ... 381 e-114 3
(BJ392512) Dictyostelium discoideum cDNA clone:dds27m22, 5' ... 381 e-114 3
(BJ396681) Dictyostelium discoideum cDNA clone:dds43f13, 5' ... 381 e-114 3
(BJ370112) Dictyostelium discoideum cDNA clone:ddc52n05, 5' ... 381 e-113 3
(BJ393543) Dictyostelium discoideum cDNA clone:dds31o17, 5' ... 377 e-113 3
(BJ366327) Dictyostelium discoideum cDNA clone:ddc38h15, 5' ... 381 e-113 3
(BJ391838) Dictyostelium discoideum cDNA clone:dds25l07, 5' ... 373 e-112 3
(BJ397569) Dictyostelium discoideum cDNA clone:dds46d24, 5' ... 373 e-112 3
(BJ394008) Dictyostelium discoideum cDNA clone:dds33o08, 5' ... 381 e-111 2
(BJ395143) Dictyostelium discoideum cDNA clone:dds37e21, 5' ... 381 e-111 2
(BJ369954) Dictyostelium discoideum cDNA clone:ddc52j15, 5' ... 381 e-111 2
(BJ369811) Dictyostelium discoideum cDNA clone:ddc51i23, 5' ... 381 e-110 3
(BJ335266) Dictyostelium discoideum cDNA clone:dda49f18, 5' ... 377 e-109 2
(BJ393367) Dictyostelium discoideum cDNA clone:dds31h01, 5' ... 365 e-109 3
(BJ369837) Dictyostelium discoideum cDNA clone:ddc51o23, 5' ... 262 e-107 2
(BJ394488) Dictyostelium discoideum cDNA clone:dds35i08, 5' ... 357 e-107 3
(BJ367397) Dictyostelium discoideum cDNA clone:ddc42g13, 5' ... 357 e-107 3
(BJ393463) Dictyostelium discoideum cDNA clone:dds31l11, 5' ... 355 e-106 3
(BJ370555) Dictyostelium discoideum cDNA clone:ddc54e16, 5' ... 353 e-106 3
(BJ395677) Dictyostelium discoideum cDNA clone:dds39c21, 5' ... 353 e-106 3
(BJ395656) Dictyostelium discoideum cDNA clone:dds39n13, 5' ... 351 e-105 3
(BJ397587) Dictyostelium discoideum cDNA clone:dds46i19, 5' ... 351 e-105 3
(BJ371299) Dictyostelium discoideum cDNA clone:ddc57m11, 5' ... 254 e-105 2
(BJ337609) Dictyostelium discoideum cDNA clone:dda58g02, 5' ... 252 e-104 2
(BJ366641) Dictyostelium discoideum cDNA clone:ddc39p18, 5' ... 250 e-104 2
(BJ391864) Dictyostelium discoideum cDNA clone:dds25b13, 5' ... 357 e-104 2
(BJ393524) Dictyostelium discoideum cDNA clone:dds31j18, 5' ... 357 e-104 2
(BJ334416) Dictyostelium discoideum cDNA clone:dda46f07, 5' ... 248 e-103 2
(BJ393836) Dictyostelium discoideum cDNA clone:dds32f21, 5' ... 343 e-103 3
(BJ365454) Dictyostelium discoideum cDNA clone:ddc35n12, 5' ... 246 e-103 2
(BJ338180) Dictyostelium discoideum cDNA clone:dda60m08, 5' ... 353 e-102 2
(BJ333795) Dictyostelium discoideum cDNA clone:dda44f02, 5' ... 341 e-102 3
(BJ338176) Dictyostelium discoideum cDNA clone:dda60k12, 5' ... 242 e-101 2
(BJ336923) Dictyostelium discoideum cDNA clone:dda55l13, 5' ... 206 e-101 3
(BJ364396) Dictyostelium discoideum cDNA clone:ddc31g15, 5' ... 349 e-101 2
(BJ337804) Dictyostelium discoideum cDNA clone:dda59d04, 5' ... 240 e-101 2
(BJ394576) Dictyostelium discoideum cDNA clone:dds35o14, 5' ... 345 e-100 2
(BJ365227) Dictyostelium discoideum cDNA clone:ddc34g13, 5' ... 343 e-99 2
(BJ393818) Dictyostelium discoideum cDNA clone:dds32b19, 5' ... 343 1e-99 2
(BJ397136) Dictyostelium discoideum cDNA clone:dds45o01, 5' ... 341 5e-99 2
(BJ397256) Dictyostelium discoideum cDNA clone:dds45k18, 5' ... 341 6e-99 2
(BJ396017) Dictyostelium discoideum cDNA clone:dds41e06, 5' ... 226 6e-97 2
(BJ362530) Dictyostelium discoideum cDNA clone:ddc22d10, 5' ... 226 6e-97 2
(BJ365959) Dictyostelium discoideum cDNA clone:ddc37o03, 5' ... 226 6e-97 2
(BJ336640) Dictyostelium discoideum cDNA clone:dda54j14, 5' ... 224 2e-96 2
(BJ332344) Dictyostelium discoideum cDNA clone:dda38e21, 5' ... 210 3e-92 2
(BJ397874) Dictyostelium discoideum cDNA clone:dds47p23, 5' ... 331 3e-89 2
(BJ330516) Dictyostelium discoideum cDNA clone:dda31g19, 5' ... 194 2e-87 2
(BJ331947) Dictyostelium discoideum cDNA clone:dda37l16, 5' ... 192 8e-87 2
(BJ392339) Dictyostelium discoideum cDNA clone:dds27e08, 5' ... 184 2e-84 2
(BJ334636) Dictyostelium discoideum cDNA clone:dda47b10, 5' ... 182 7e-84 2
(BJ393870) Dictyostelium discoideum cDNA clone:dds32n19, 5' ... 182 7e-84 2
(BJ365107) Dictyostelium discoideum cDNA clone:ddc34m05, 5' ... 182 7e-84 2
(BJ334460) Dictyostelium discoideum cDNA clone:dda46c13, 5' ... 289 1e-83 2
(BJ365734) Dictyostelium discoideum cDNA clone:ddc36m11, 5' ... 180 3e-83 2
(BJ365464) Dictyostelium discoideum cDNA clone:ddc35p11, 5' ... 180 3e-83 2
(BJ333993) Dictyostelium discoideum cDNA clone:dda44b21, 5' ... 180 3e-83 2
(BJ330857) Dictyostelium discoideum cDNA clone:dda33b03, 5' ... 180 3e-83 2
(BJ367810) Dictyostelium discoideum cDNA clone:ddc44h11, 5' ... 180 3e-83 2
(BJ366600) Dictyostelium discoideum cDNA clone:ddc39g13, 5' ... 178 1e-82 2
(BJ368140) Dictyostelium discoideum cDNA clone:ddc45o11, 5' ... 178 1e-82 2
(BJ367230) Dictyostelium discoideum cDNA clone:ddc41k19, 5' ... 176 4e-82 2
(BJ396945) Dictyostelium discoideum cDNA clone:dds44d15, 5' ... 167 4e-79 2
(BJ364882) Dictyostelium discoideum cDNA clone:ddc33h08, 5' ... 161 2e-77 2
(BJ369780) Dictyostelium discoideum cDNA clone:ddc51p18, 5' ... 161 9e-77 2
(BJ366597) Dictyostelium discoideum cDNA clone:ddc39f16, 5' ... 254 2e-76 3
(BJ364900) Dictyostelium discoideum cDNA clone:ddc33l12, 5' ... 252 8e-76 3
(BJ368814) Dictyostelium discoideum cDNA clone:ddc48n04, 5' ... 250 3e-75 3
(BJ392283) Dictyostelium discoideum cDNA clone:dds27h01, 5' ... 250 3e-75 3
(BJ364894) Dictyostelium discoideum cDNA clone:ddc33k09, 5' ... 141 3e-73 4
(BJ364535) Dictyostelium discoideum cDNA clone:ddc32g02, 5' ... 161 5e-72 2
(BJ396811) Dictyostelium discoideum cDNA clone:dds44d06, 5' ... 161 8e-72 3
(BJ364789) Dictyostelium discoideum cDNA clone:ddc33a03, 5' ... 161 3e-70 2
(AU060892) Dictyostelium discoideum slug cDNA, clone SLC113. 242 2e-69 2
(BJ396022) Dictyostelium discoideum cDNA clone:dds41g03, 5' ... 161 5e-69 2
(BJ369857) Dictyostelium discoideum cDNA clone:ddc52d08, 5' ... 161 3e-68 4
(BJ396373) Dictyostelium discoideum cDNA clone:dds42o16, 5' ... 238 4e-68 2
(BJ366151) Dictyostelium discoideum cDNA clone:ddc37o23, 5' ... 266 9e-67 1
(BJ365585) Dictyostelium discoideum cDNA clone:ddc35j20, 5' ... 161 5e-66 2
(BJ392182) Dictyostelium discoideum cDNA clone:dds26o14, 5' ... 161 7e-65 2
(BJ371391) Dictyostelium discoideum cDNA clone:ddc57f19, 5' ... 161 2e-59 2
(BJ338841) Dictyostelium discoideum cDNA clone:dda63a09, 5' ... 161 6e-56 2
(BJ397055) Dictyostelium discoideum cDNA clone:dds44k21, 5' ... 174 4e-49 2
(BJ391667) Dictyostelium discoideum cDNA clone:dds24c20, 5' ... 155 4e-45 3
(BJ370570) Dictyostelium discoideum cDNA clone:ddc54i13, 5' ... 139 2e-42 3
(BJ364891) Dictyostelium discoideum cDNA clone:ddc33j10, 5' ... 145 2e-40 2
(BJ330966) Dictyostelium discoideum cDNA clone:dda33k11, 5' ... 131 4e-38 3
(BJ396297) Dictyostelium discoideum cDNA clone:dds42m07, 5' ... 113 1e-34 3
(BJ391812) Dictyostelium discoideum cDNA clone:dds25d11, 5' ... 107 3e-29 2
(BJ338817) Dictyostelium discoideum cDNA clone:dda63l01, 5' ... 141 3e-29 1
(BJ369093) Dictyostelium discoideum cDNA clone:ddc49e08, 5' ... 105 1e-28 2
(BJ394380) Dictyostelium discoideum cDNA clone:dds34l22, 5' ... 137 5e-28 1
(BJ393022) Dictyostelium discoideum cDNA clone:dds29f24, 5' ... 125 2e-24 1
(BJ365108) Dictyostelium discoideum cDNA clone:ddc34m06, 5' ... 58 5e-08 2
(BJ394656) Dictyostelium discoideum cDNA clone:dds36d02, 5' ... 58 2e-07 2
(BJ370709) Dictyostelium discoideum cDNA clone:ddc55h05, 5' ... 58 4e-04 1
(AL390197) Human DNA sequence from clone RP11-190F19 on chro... 54 0.006 1
(AC093323) Homo sapiens BAC clone RP11-539L10 from 4, comple... 54 0.006 1
(AC006097) Homo sapiens chromosome 10 clone CIT987SK-1031G15... 54 0.006 1
(AC004480) Homo sapiens chromosome 4, *** SEQUENCING IN PROG... 54 0.006 1
(BJ364587) Dictyostelium discoideum cDNA clone:ddc32b07, 5' ... 40 0.094 2
(AC094193) Rattus norvegicus clone CH230-2L4, *** SEQUENCING... 48 0.17 3
(AC122089) Rattus norvegicus clone CH230-270L9, *** SEQUENCI... 48 0.17 2
(AC105684) Rattus norvegicus clone CH230-268F3, *** SEQUENCI... 48 0.19 2
(AC154396) Mus musculus chromosome 3, clone RP24-254D5, comp... 36 0.22 2
(AC183268) Mus musculus BAC clone RP23-358C4 from chromosome... 48 0.38 1
(AC153009) Mus musculus BAC clone RP23-408I18 from chromosom... 48 0.38 1
(AC136551) Rattus norvegicus clone CH230-266F24, *** SEQUENC... 48 0.38 1
(AC094286) Rattus norvegicus clone CH230-3H6, WORKING DRAFT ... 48 0.38 1
(AC174187) Strongylocentrotus purpuratus clone R3-1024K14, W... 48 0.38 1
(ER776734) TAACSP3AShA_0035J21F TAACSP3AShA Triticum aestivu... 48 0.38 1
(FI243267) CccaBb032-C18JR CccABb Cajanus cajan genomic clon... 34 1.1 2
(FI234133) CccaBb023-N3JR CccABb Cajanus cajan genomic clone... 34 1.3 2
(J02675) Rat prostatic spermine-binding protein (SBP) mRNA, ... 46 1.5 1
(AC167466) Mus musculus chromosome 7, clone RP24-220N8, comp... 46 1.5 1
(AC161413) Mus musculus chromosome 19, clone RP23-106D17, co... 46 1.5 1
(AC140409) Mus musculus BAC clone RP23-138K22 from 9, comple... 46 1.5 1
(AC102432) Mus musculus chromosome 19, clone RP24-114A21, co... 46 1.5 1
(AC098190) Rattus norvegicus 2 BAC CH230-197E15 (Children's ... 46 1.5 1
(AC147079) Pan troglodytes BAC clone RP43-184E24 from chromo... 46 1.5 1
(AC146149) Pan troglodytes BAC clone RP43-37G13 from chromos... 46 1.5 1
(CS741864) Sequence 9860 from Patent WO2005083127. 46 1.5 1
(AL121749) Human DNA sequence from clone RP11-425A6 on chrom... 46 1.5 1
(AC117500) Homo sapiens 12 BAC RP11-495K9 (Roswell Park Canc... 46 1.5 1
(AC092850) Homo sapiens 12 BAC RP11-346B9 (Roswell Park Canc... 46 1.5 1
(AC026191) Homo sapiens chromosome 3 clone RP11-380O24 map 3... 46 1.5 1
(AC011591) Homo sapiens, clone RP11-118B18, complete sequence. 46 1.5 1
(AC009330) Homo sapiens clone RP11-83M17 from 7q31, complete... 46 1.5 1
(AC161924) Mus musculus chromosome 3 clone RP24-331E18 map 3... 46 1.5 1
(AC158107) Bos taurus clone CH240-50D16, WORKING DRAFT SEQUE... 46 1.5 1
(AC156875) Bos taurus clone CH240-63I8, WORKING DRAFT SEQUEN... 46 1.5 1
(AC131854) Rattus norvegicus clone CH230-96G13, WORKING DRAF... 46 1.5 1
(AC126867) Rattus norvegicus clone CH230-49B18, WORKING DRAF... 46 1.5 1
(AC115400) Rattus norvegicus clone CH230-59M6, *** SEQUENCIN... 46 1.5 1
(AC111358) Rattus norvegicus clone CH230-90P4, WORKING DRAFT... 46 1.5 1
(AC098423) Rattus norvegicus clone CH230-2F6, WORKING DRAFT ... 46 1.5 1
(AC095285) Rattus norvegicus clone CH230-11A8, WORKING DRAFT... 46 1.5 1
(FP086608) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.5 1
(FP085560) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.5 1
(FP085424) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.5 1
(DQ280184) Muntiacus muntjak vaginalis chromosome 1 clone 05... 46 1.5 1
(CU929930) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.5 1
(AC094475) Rattus norvegicus clone CH230-4J5, *** SEQUENCING... 46 1.5 1
(CU468601) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.5 1
(AC220056) Bos taurus clone CH240-315H17, WORKING DRAFT SEQU... 46 1.5 1
(AC199645) Pan troglodytes chromosome 4 clone CH251-334M12, ... 46 1.5 1
(AC179067) Strongylocentrotus purpuratus clone R3-4009C08, W... 46 1.5 1
(AC167465) Mus musculus chromosome 7 clone RP23-469P8 map 7,... 46 1.5 1
(AC020724) Homo sapiens chromosome 12 clone RP11-495K9, WORK... 46 1.5 1
(AC018823) Homo sapiens chromosome 3 clone RP11-325L6 map 3p... 46 1.5 1
(ER426699) 1092963755161 Global-Ocean-Sampling_GS-35-01-01-1... 46 1.5 1
(EJ413174) 1093012162960 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.5 1
(CZ983952) 198367 Tomato MboI BAC Library Solanum lycopersic... 46 1.5 1
(CE732225) tigr-gss-dog-17000315427625 Dog Library Canis lup... 46 1.5 1
(BI278913) UI-R-DB0-bys-e-01-0-UI.s1 UI-R-DB0 Rattus norvegi... 46 1.5 1
(BE349846) hq43h07.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE349803) hq43c11.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE349729) hq42c05.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE349696) hq41g04.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE349672) hq41d11.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE349666) hq41d04.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329351) hq39g12.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329345) hq39g05.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329328) hq39e03.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329253) hq34a02.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329172) hq33g08.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329074) hq36e01.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329068) hq36d07.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE329033) hq32h08.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE328996) hq35h03.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE328971) hq35e01.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE328952) hq35b07.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(BE328931) hq32d03.x1 NCI_CGAP_Pr35 Rattus norvegicus cDNA c... 46 1.5 1
(FI247449) CccaBb026-C20JR CccABb Cajanus cajan genomic clon... 34 1.7 2
(FI261045) CccaBb058-E13JF CccABb Cajanus cajan genomic clon... 34 1.8 2
(CR925829) C.jacchus DNA sequence from clone CH259-147B13. 44 1.9 3
(FI231863) CccaBb001-L20JR CccABb Cajanus cajan genomic clon... 34 2.0 2
(FI248643) CccaBb026-F19JR CccABb Cajanus cajan genomic clon... 34 2.0 2
(FI269021) CccaBb046-O13JR CccABb Cajanus cajan genomic clon... 34 2.0 2
(FI272993) CccaBb065-O24JF CccABb Cajanus cajan genomic clon... 34 2.1 2
(FI268286) CccaBb047-O15JF CccABb Cajanus cajan genomic clon... 34 2.1 2
(FI231782) CccaBb001-L21JR CccABb Cajanus cajan genomic clon... 34 2.1 2
(FI266961) CccaBb054-F10JR CccABb Cajanus cajan genomic clon... 34 2.2 2
(FI260112) CccaBb042-P2JF CccABb Cajanus cajan genomic clone... 34 2.3 2
(FI234258) CccaBb023-C17JF CccABb Cajanus cajan genomic clon... 34 2.4 2
(FI263284) CccaBb039-C1JR CccABb Cajanus cajan genomic clone... 34 2.4 2
(FI244934) CccaBb003-L13JR CccABb Cajanus cajan genomic clon... 34 2.4 2
(FI242393) CccaBb032-O9JR CccABb Cajanus cajan genomic clone... 34 2.4 2
(FI245207) CccaBb032-N24JF CccABb Cajanus cajan genomic clon... 34 2.5 2
(FI235438) CccaBb011-P5JF CccABb Cajanus cajan genomic clone... 34 2.5 2
(FI267372) CccaBb039-D9JF CccABb Cajanus cajan genomic clone... 34 2.5 2
(FI257333) CccaBb063-N8JF CccABb Cajanus cajan genomic clone... 34 2.5 2
(FI237677) CccaBb025-K3JR CccABb Cajanus cajan genomic clone... 34 2.5 2
(FI243130) CccaBb032-I20JF CccABb Cajanus cajan genomic clon... 34 2.6 2
(FI255953) CccaBb033-L9JR CccABb Cajanus cajan genomic clone... 34 2.6 2
(FI249139) CccaBb020-D9JF CccABb Cajanus cajan genomic clone... 34 2.6 2
(FI241683) CccaBb020-M12JR CccABb Cajanus cajan genomic clon... 34 2.6 2
(FI252658) CccaBb017-B18JR CccABb Cajanus cajan genomic clon... 34 2.6 2
(FI267462) CccaBb054-E1JR CccABb Cajanus cajan genomic clone... 34 2.6 2
(FI253130) CccaBb043-J15JF CccABb Cajanus cajan genomic clon... 34 2.6 2
(FI239491) CccaBb022-D11JR CccABb Cajanus cajan genomic clon... 34 2.6 2
(FI253515) CccaBb035-F11JR CccABb Cajanus cajan genomic clon... 34 2.6 2
(FI236786) CccaBb029-A21JR CccABb Cajanus cajan genomic clon... 34 2.6 2
(FI261311) CccaBb058-G18JF CccABb Cajanus cajan genomic clon... 34 2.7 2
(FI253220) CccaBb043-L10JF CccABb Cajanus cajan genomic clon... 34 2.7 2
(FI238537) CccaBb028-A4JF CccABb Cajanus cajan genomic clone... 34 2.7 2
(AC098528) Rattus norvegicus clone CH230-82P11, WORKING DRAF... 38 2.8 3
(FI249805) CccaBb007-N12JR CccABb Cajanus cajan genomic clon... 34 2.8 2
(FI239639) CccaBb028-N13JF CccABb Cajanus cajan genomic clon... 34 2.8 2
(FI253208) CccaBb043-J4JF CccABb Cajanus cajan genomic clone... 34 2.9 2
(FI266742) CccaBb064-G17JR CccABb Cajanus cajan genomic clon... 34 3.9 2
(AC180941) Strongylocentrotus purpuratus clone R3-3061O03, W... 38 4.9 4
(AL627073) Mouse DNA sequence from clone RP23-234E14 on chro... 44 5.9 1
(AL603889) Mouse DNA sequence from clone RP23-407M20 on chro... 44 5.9 1
(AL591544) Mouse DNA sequence from clone RP23-386D6 on chrom... 44 5.9 1
(AC162921) Mus musculus BAC clone RP23-342H1 from chromosome... 44 5.9 1
(AC154190) Mus musculus BAC clone RP24-465P16 from chromosom... 44 5.9 1
(AC153135) Mus musculus BAC clone RP24-181M6 from chromosome... 44 5.9 1
(AC149214) Mus musculus BAC clone RP24-230G21 from 7, comple... 44 5.9 1
(AC140318) Mus musculus BAC clone RP23-400F19 from 9, comple... 44 5.9 1
(AC133495) Mus musculus BAC clone RP24-331G15 from chromosom... 44 5.9 1
(AC131112) Mus musculus BAC clone RP24-136L4 from chromosome... 44 5.9 1
(AC124367) Mus musculus BAC clone RP24-545D20 from chromosom... 44 5.9 1
(AC121976) Mus musculus BAC clone RP24-286N17 from 8, comple... 44 5.9 1
(AC108321) Rattus norvegicus BAC CH230-261E4 (Children's Hos... 44 5.9 1
(AC100209) Mus musculus chromosome 13, clone RP23-59L9, comp... 44 5.9 1
(AC217026) Pan troglodytes BAC clone CH251-585I19 from chrom... 44 5.9 1
(AC213075) Pan troglodytes BAC clone CH251-490H13 from chrom... 44 5.9 1
(AC194566) Pan troglodytes BAC clone CH251-165D21 from chrom... 44 5.9 1
(AC193936) Pan troglodytes BAC clone CH251-158M9 from chromo... 44 5.9 1
(AC143141) Macaca mulatta BAC CH250-269F10 () complete sequ... 44 5.9 1
(AY661659) Sorghum bicolor clone BAC 75D9, complete sequence. 44 5.9 1
(DL005687) NUCLEIC ACID PROBES AND NUCLEIC ACID ANALOG PROBES. 44 5.9 1
(CS459612) Sequence 93 from Patent WO2006117596. 44 5.9 1
(Z98747) Human DNA sequence from clone RP1-37J18 on chromoso... 44 5.9 1
(U66060) Human germline T-cell receptor beta chain TCRBV13S1... 44 5.9 1
(U03115) Homo sapiens T-cell receptor beta variable region (... 44 5.9 1
(AL445933) Human DNA sequence from clone RP11-486B10 on chro... 44 5.9 1
(AL445530) Human DNA sequence from clone RP1-61F10 on chromo... 44 5.9 1
(AL133232) Human DNA sequence from clone RP5-897D18 on chrom... 44 5.9 1
(AL117329) Human DNA sequence from clone RP11-191L9 on chrom... 44 5.9 1
(AC229888) Homo sapiens BAC clone RP11-325O4 from chromosome... 44 5.9 1
(AC130686) Homo sapiens chromosome 17, clone RP13-415G19, co... 44 5.9 1
(AC105208) Homo sapiens chromosome 17, clone CTD-3226O14, co... 44 5.9 1
(AC092271) Homo sapiens chromosome 5 clone CTC-305H13, compl... 44 5.9 1
(AC080005) Homo sapiens 3 BAC RP11-475N22 (Roswell Park Canc... 44 5.9 1
(AC006028) Homo sapiens BAC clone GS1-165O14 from 7, complet... 44 5.9 1
(AC004933) Homo sapiens PAC clone RP5-952L21 from 7p22-p2, c... 44 5.9 1
(AC162636) Bos taurus clone CH240-120K5, WORKING DRAFT SEQUE... 44 5.9 1
(AC141377) Rattus norvegicus clone CH230-259J22, WORKING DRA... 44 5.9 1
(AC141203) Rattus norvegicus clone CH230-389K15, WORKING DRA... 44 5.9 1
(AC136584) Rattus norvegicus clone CH230-6N19, WORKING DRAFT... 44 5.9 1
(AC134200) Rattus norvegicus clone CH230-141E10, *** SEQUENC... 44 5.9 1
(AC134108) Rattus norvegicus clone CH230-11K13, *** SEQUENCI... 44 5.9 1
(AC133995) Rattus norvegicus clone CH230-398E18, *** SEQUENC... 44 5.9 1
(AC133992) Rattus norvegicus clone CH230-357C9, *** SEQUENCI... 44 5.9 1
(AC131492) Lytechinus variegatus clone Lv229D15, *** SEQUENC... 44 5.9 1
(AC128442) Rattus norvegicus clone CH230-96F23, *** SEQUENCI... 44 5.9 1
(AC128095) Rattus norvegicus clone CH230-319P22, *** SEQUENC... 44 5.9 1
(AC127942) Rattus norvegicus clone CH230-142L1, WORKING DRAF... 44 5.9 1
(AC127623) Rattus norvegicus clone CH230-12J22, *** SEQUENCI... 44 5.9 1
(AC127063) Rattus norvegicus clone CH230-9K4, *** SEQUENCING... 44 5.9 1
(AC126821) Rattus norvegicus clone CH230-8N3, *** SEQUENCING... 44 5.9 1
(AC126065) Rattus norvegicus clone CH230-41O21, *** SEQUENCI... 44 5.9 1
(AC125559) Rattus norvegicus clone CH230-8J3, *** SEQUENCING... 44 5.9 1
(AC123425) Rattus norvegicus clone CH230-509F21, WORKING DRA... 44 5.9 1
(AC123187) Rattus norvegicus clone CH230-30A13, *** SEQUENCI... 44 5.9 1
(AC120474) Rattus norvegicus clone CH230-459E14, WORKING DRA... 44 5.9 1
(AC119550) Rattus norvegicus clone CH230-67E6, *** SEQUENCIN... 44 5.9 1
(AC119497) Rattus norvegicus clone CH230-521F8, *** SEQUENCI... 44 5.9 1
(AC117836) Rattus norvegicus clone RP31-4H6, *** SEQUENCING ... 44 5.9 1
(AC116199) Rattus norvegicus clone CH230-247N5, WORKING DRAF... 44 5.9 1
(AC115348) Rattus norvegicus clone CH230-209P22, WORKING DRA... 44 5.9 1
(AC114078) Rattus norvegicus clone CH230-17A11, *** SEQUENCI... 44 5.9 1
(AC113752) Rattus norvegicus clone CH230-187I3, *** SEQUENCI... 44 5.9 1
(AC112525) Rattus norvegicus clone CH230-233J14, *** SEQUENC... 44 5.9 1
(AC109101) Rattus norvegicus clone CH230-290L5, *** SEQUENCI... 44 5.9 1
(AC106702) Rattus norvegicus clone CH230-219H18, WORKING DRA... 44 5.9 1
(AC106401) Rattus norvegicus clone CH230-131L3, WORKING DRAF... 44 5.9 1
(AC106160) Rattus norvegicus clone CH230-195N12, WORKING DRA... 44 5.9 1
(AC105839) Rattus norvegicus clone CH230-45O19, *** SEQUENCI... 44 5.9 1
(AC098217) Rattus norvegicus clone CH230-121G20, WORKING DRA... 44 5.9 1
(AC098184) Rattus norvegicus clone CH230-182F19, WORKING DRA... 44 5.9 1
(AC096154) Rattus norvegicus clone CH230-10H24, WORKING DRAF... 44 5.9 1
(AC096106) Rattus norvegicus clone CH230-27L19, *** SEQUENCI... 44 5.9 1
(AC095726) Rattus norvegicus clone CH230-9A5, WORKING DRAFT ... 44 5.9 1
(AC095716) Rattus norvegicus clone CH230-9K6, WORKING DRAFT ... 44 5.9 1
(AC095218) Rattus norvegicus clone CH230-9L13, *** SEQUENCIN... 44 5.9 1
(CU915445) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.9 1
(CU861486) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.9 1
(CU693426) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.9 1
(CU639443) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.9 1
(AC094176) Rattus norvegicus clone CH230-2P4, WORKING DRAFT ... 44 5.9 1
(AC093966) Rattus norvegicus clone CH230-4P1, *** SEQUENCING... 44 5.9 1
(AC067821) Homo sapiens chromosome 17 clone RP11-260O19 map ... 44 5.9 1
(CU463879) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.9 1
(AP010645) Lotus japonicus genomic DNA, clone: LjT05G19, TM1... 44 5.9 1
(AF301236) Homo sapiens chromosome 8 clone CTD-2269D11 map 8... 44 5.9 1
(AC230562) Bos taurus clone CH240-505F13, WORKING DRAFT SEQU... 44 5.9 1
(AC224949) Bos taurus clone CH240-471O20, WORKING DRAFT SEQU... 44 5.9 1
(AC224809) Bos taurus clone CH240-476A20, WORKING DRAFT SEQU... 44 5.9 1
(AC220106) Bos taurus clone CH240-362O19, WORKING DRAFT SEQU... 44 5.9 1
(AC201529) Strongylocentrotus purpuratus clone R3-3090C1, WO... 44 5.9 1
(AC178811) Strongylocentrotus purpuratus clone R3-22H21, WOR... 44 5.9 1
(AC173402) Bos taurus clone CH240-16P22, WORKING DRAFT SEQUE... 44 5.9 1
(AC172977) Bos taurus clone CH240-266N9, WORKING DRAFT SEQUE... 44 5.9 1
(EI431205) PV_GBa0023D14.r PV_GBa Phaseolus vulgaris genomic... 44 5.9 1
(AL188841) Tetraodon nigroviridis genome survey sequence PUC... 44 5.9 1
(DH778948) Rattus norvegicus DNA, BAC clone: RNB1-366I19, 5'... 44 5.9 1
(DH765215) Rattus norvegicus DNA, BAC clone: RNB1-348C03, 5'... 44 5.9 1
(DH758931) Rattus norvegicus DNA, BAC clone: RNB1-339L06, 5'... 44 5.9 1
(DH678296) Rattus norvegicus DNA, BAC clone: RNB1-230K11, 5'... 44 5.9 1
(CU819809) A BAC library has been constructed from PN40024 g... 44 5.9 1
(BE916456) 601667357F1 NCI_CGAP_Mam1 Mus musculus cDNA clone... 44 5.9 1
(FD462377) LARVR87TR Haematobia irritans 1st Instar Larvae H... 44 5.9 1
(FD462376) LARVR87TF Haematobia irritans 1st Instar Larvae H... 44 5.9 1
(FD459752) LARVB02TF Haematobia irritans 1st Instar Larvae H... 44 5.9 1
(FD384681) Nad03b_117_C08_C005.g1 Nuphar advena flower bud l... 44 5.9 1
(FC836187) CBHI6533.fwd CBHI Metridium senile tentacle Metri... 44 5.9 1
(FC836186) CBHI6533.rev CBHI Metridium senile tentacle Metri... 44 5.9 1
(EY306233) CAWX19806.fwd CAWX Helobdella robusta Primary Ear... 44 5.9 1
(EY306232) CAWX19806.rev CAWX Helobdella robusta Primary Ear... 44 5.9 1
(AC021730) Homo sapiens chromosome 6 clone RP11-650H14 map 6... 42 6.2 2
(AC214902) Pan troglodytes clone rp43-10a18, WORKING DRAFT S... 38 6.2 5
(AC173277) Bos taurus clone CH240-307G21, WORKING DRAFT SEQU... 42 6.3 2
(AM467891) Vitis vinifera contig VV78X155293.3, whole genome... 42 6.4 2
(CS251968) Sequence 4 from Patent WO2005116069. 42 8.4 2
(CC534501) CH240_412B2.TARBAC13P2 CHORI-240 Bos taurus genom... 38 9.3 2
(FB596507) Sequence 12230 from Patent WO2004081186. 32 9.6 2

>(BJ394759) Dictyostelium discoideum cDNA clone:dds36j12, 5' end,
single read.
Length = 654

Score = 539 bits (272), Expect(3) = e-161
Identities = 272/272 (100%)
Strand = Plus / Plus


Query: 330 caaagtagtagaaatttaaaaccaaaaccatcacaaagcaatttgaaatggatagcaaga 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caaagtagtagaaatttaaaaccaaaaccatcacaaagcaatttgaaatggatagcaaga 438


Query: 390 gatttaaaaaagaaatctgttagaaaagattcagagagaaagttaaagagtagtggtgtt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gatttaaaaaagaaatctgttagaaaagattcagagagaaagttaaagagtagtggtgtt 498


Query: 450 ttaaagaaaaagaatactgtgatggactttggtgaagatgatggtggtagtggtgacgat 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttaaagaaaaagaatactgtgatggactttggtgaagatgatggtggtagtggtgacgat 558


Query: 510 ggtaatataacccgaaggtttaccaattagtgaaggtatggatgatttaccatcatcttc 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggtaatataacccgaaggtttaccaattagtgaaggtatggatgatttaccatcatcttc 618


Query: 570 aaactctcgtggcggcagcggtaatgatgaac 601
||||||||||||||||||||||||||||||||
Sbjct: 619 aaactctcgtggcggcagcggtaatgatgaac 650

Score = 58.0 bits (29), Expect(3) = e-161
Identities = 29/29 (100%)
Strand = Plus / Plus


Query: 216 gaagggggtgatttcccaataaacacccc 244
|||||||||||||||||||||||||||||
Sbjct: 265 gaagggggtgatttcccaataaacacccc 293

Score = 34.2 bits (17), Expect(3) = e-161
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1 aattttataaataatta 17
|||||||||||||||||
Sbjct: 13 aattttataaataatta 29

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 453,381,141
Number of extensions: 30887439
Number of successful extensions: 2808303
Number of sequences better than 10.0: 455
Length of query: 601
Length of database: 98,766,808,389
Length adjustment: 23
Effective length of query: 578
Effective length of database: 96,507,600,660
Effective search space: 55781393181480
Effective search space used: 55781393181480
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15353-1 (Contig-U15353-1Q) /CSM_Contig/Contig-U15353-1Q.Seq.d
(601 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q9U720) RecName: Full=Cellulose synthase catalytic subunit A [U... 132 9e-33

>(Q9U720) RecName: Full=Cellulose synthase catalytic subunit A
[UDP-forming]; EC=2.4.1.12;
&AF163835_1(AF163835|pid:none)
Length = 1059

Score = 132 bits (331), Expect(2) = 9e-33
Identities = 71/106 (66%), Positives = 71/106 (66%)
Frame = +3

Query: 204 MDRNEGGDFPINTPXXXXXXXXXXXXXXXXXXXXXXRDIGNNQSSRNLKPKPSQSNLKWI 383
MDRNEGGDFPINTP RDIGNNQSSRNLKPKPSQSNLKWI
Sbjct: 1 MDRNEGGDFPINTPNNINSSGGSYNNSMNNSSNNIGRDIGNNQSSRNLKPKPSQSNLKWI 60

Query: 384 ARDLKKKSVRKDSERKLKSSGVLKKKNTVMXXXXXXXXXXXXXNIT 521
ARDLKKKSVRKDSERKLKSSGVLKKKNTVM NIT
Sbjct: 61 ARDLKKKSVRKDSERKLKSSGVLKKKNTVMDFGEDDGGSGDDGNIT 106

Score = 31.2 bits (69), Expect(2) = 9e-33
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1

Query: 523 EGLPISEGMDDLP 561
EGLPISEGMDDLP
Sbjct: 107 EGLPISEGMDDLP 119

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 565,248,377
Number of extensions: 6336035
Number of successful extensions: 12357
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12257
Number of HSP's successfully gapped: 2
Length of query: 200
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 78
Effective length of database: 656,320,666
Effective search space: 51193011948
Effective search space used: 51193011948
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)

PSORT

psg: 0.75 gvh: 0.19 alm: 0.65 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.00
nuc: 0.06 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: cytoskeletal
8.0 %: mitochondrial

>> prediction for Contig-U15353-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 2
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0