Contig-U15345-1
Contig ID Contig-U15345-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15345-1 (Contig-U15345-1Q) /CSM_Contig/Contig-U15345-1Q.Seq.d
ACTGTTGGCCTACTGGTACACAATATAACAATAATAATAATTATTTAAAA
TGGGTAATTTATTATCTCATACTTATGGAGTCCCTTCAATAATTCTCAAT
AATAATTATAGTATCCTCATCAATTTTTTTAATAATTTTAAAAAAAGATA
AACAAAGATATATAAATAATCAAATTAATAATCAAATTAATAATCAAATT
GTTCCTGAAATATCCAATAATAATAGTTATAATAATAGTGATAATAATAA
TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA
ATAATAATAATAATAATAATAATAATAATAATAACGATGATTCATCTGTT
AATCTTGGCAATAATTTAAAAACTACAGATTATGATATTGTAATTGATTT
ACAAAGTGTTGATACATTTGTAATTAAAGATGCTTGTTGGACAGTATATG
TCAATAAAGATTTACTTAAAAATGTTAAAGAAGATTCACCAAATCCACTA
GACTGTCTTTTAGAAGGTTCAAATAAATTTAGAACTGCAACCATTATTGG
TTATTTTAAAAGAGGCAAAACCTTTACAGCAAATTTAATAAATAATATTA
ATTTACCATCTGGTAGTAAAACTAAAACAAAAGGTTTATCAATTTATATT
TCTCATACAAATGATACTTTATTTATTGATACTCAAGGTAGTAATACTCC
TCTACCATTTTTTGTAGATGAAAATGAAAATGAAGAACTTAAAAAAGCTT
ATAATATCAATCAAGCTGATGGAAGTATTAAATTGAATAATCTTCATCTT
GCACGTAAGAAAGCAACTGAATCATTCATTCAAGAGACTGCTATTAGTTT
ATCAAATGTTGTAATTTTCGTTGTTAATGAAATGACATGGCACGATCAAC
AAAATATAATGGCCATTCAAAAGAAGATTAAAACTCAAAATCCAATTGAA
AAACAAAAAATCAGAGAACTCTATGTGTTTCATAATTATATGAATATTTC
AAATATGGTTGATCTAATGGCAATGATTAAAACCTATGTAGCAACTCCAT
TCAAAGGTTATTTTCATACTGAATTCAGCCTTCATTCTGATAATGAATAT
ATAATTTATTATACAGATGCCGAGAATTTTACAACTCATTTCTTTTTATG
TAATCATGGTAGTGAGTTTGGCAAAAAGTGGAATGAATTAGTGGGTAAAT
TTGTCAAGACTAAAATTAAAAATGTTACAAATCAAAACTATGCATTTGAT
ACAATACTATTAGAAACTTTAAAAGAGAAAATGAAAACCAATATTAAAAA
TCCAACAGATTTAAAAATTGTACCATATTATAATTCTCAAACTCAAGTTG
TGGAAATTGAAAATAAATCATCGAGTACAAGATCAAACACATTTGTATAT
AAGAGACAGACTGGTATACCATTAAAGGATCAACTCAAAATCCAATTGAA
AAACAAAAAATCAGAGAACTCTATGTGTTTCATAATTATATGAATATTTC
AAATATGGTTGATCTAATGGCAATGATTAAAACCTATGTAGCAACTCCAT
TCAAAGGTTATTTTCATACTGAATTCAGCCTTCATTCTGATAATGAATAT
ATAATTTATTATACAGATGCCGAGAATTTTACAACTCATTTCTTTTTATG
TAATCATGGTAGTGAGTTTGGCAAAAAGTGGAATGAATTAGTGGGTAAAT
TTGTCAAGACTAAAATTAAAAATGTTACAAATCAAAACTATGCATTTGAT
ACAATACTATTAGAAACTTTAAAAGAGAAAATGAAAACCAATATTAAAAA
TCCAACAGATTTAAAAAATTGTACCATATTATAATTCTCAAACTCAAGTT
GTGGAAATTGAAAATAAATCATCGAGTACAAGATCAAAACACATTTGTAT
ATAAGAGACAGACTGGTATACCATTAAAGGATCAAAAAACATTGGAAGAT
TTAGAAGAAATGTTCAATCAAGTTAAAGCACATACTATTGATATTAACCA
AGTTCCAATGTATTCGATTGTACCTGCTATTAAAAATAATGAATATGAGC
AATGGAAATATGCATTAAATAACAAGGATATCATTTTCATTGATAATCTA
TTGATTGTAACTGGAAGTTTCAATCCAACCTATGACAGTCTTGAATGTGA
GAATCGTACATTAATATTCACATTTGATTTACCAGATATTCCAGAATCTC
ATTTCTCTCATTCAATCTACTATGATCCAAGTGACAAAGTTAGATACTTA
AAAGTCTCGGGTAATAGAAAATTAAGTTATAGAGCATTAACTGGTACACG
TGGTGGTGAGAGTACAATTAATGAATATCCATCAGCTGGTGTTAAAATTG
GTAATAGTTTAAATCTTAGAAAAGATGGAGAATTTGATCTGAGAATTCCA
ATTGAAGCAAATTATAGTAAAAATTATTCAAATCATTTTGAAAATGGTGT
TTTAACATTAACATTTAAAGAAGAAATTGAAGGTCTTCCAGATGAAAGTT
GCAAATAAAAAAAATATTAAAAAAATAAAAAATAATAAATAAATAATAAT
CTAAAAAAATAAATCAAAAAAATTAATTTTTTATTACTTTAAGAT

Gap no gap
Contig length 2595
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 4770514
End point 4772202
Strand (PLUS/MINUS) PLUS
Number of clones 19
Number of EST 31
Link to clone list U15345
List of clone(s)

est1=SHB325F,1,303
est2=AFI550F,7,330
est3=AHD861F,7,367
est4=AHE564F,7,345
est5=AHN349F,9,368
est6=AHI704F,16,394
est7=SHA725F,18,303
est8=SHA725Z,18,292
est9=AHL245F,111,233
est10=AHL469F,122,332
est11=AFA349F,308,899
est12=AFK186F,318,997
est13=AFD281F,392,1048
est14=AFI865F,537,1142
est15=AFA349H,932,1933
est16=AHL469Z,1757,2419
est17=AHD861Z,1799,2521
est18=AFI865Z,1803,2491
est19=AHL245Z,1804,2459
est20=AHE564Z,1819,2559
est21=AHI704Z,1820,2491
est22=CHI193Z,1822,2386
est23=CHH490Z,1857,2489
est24=AFK186Z,1863,2532
est25=CHI178Z,1864,2468
est26=AFA349Z,1869,2536
est27=SSD243Z,1957,2560
est28=AHN349Z,1974,2575
est29=VHF724Z,1999,2213
est30=CHK740Z,2109,2594
est31=AFI550Z,2358,2472
Translated Amino Acid sequence
cwptgtqynnnnnylkwviyylilmeslq*FSIIIIVSSSIFLIILKKDKQRYINNQINN
QINNQIVPEISNNNSYNNSDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDSSVNLGN
NLKTTDYDIVIDLQSVDTFVIKDACWTVYVNKDLLKNVKEDSPNPLDCLLEGSNKFRTAT
IIGYFKRGKTFTANLINNINLPSGSKTKTKGLSIYISHTNDTLFIDTQGSNTPLPFFVDE
NENEELKKAYNINQADGSIKLNNLHLARKKATESFIQETAISLSNVVIFVVNEMTWHDQQ
NIMAIQKKIKTQNPIEKQKIRELYVFHNYMNISNMVDLMAMIKTYVATPFKGYFHTEFSL
HSDNEYIIYYTDAENFTTHFFLCNHGSEFGKKWNELVGKFVKTKIKNVTNQNYAFDTILL
ETLKEKMKTNIKNPTDLKIVPYYNSQTQVVEIENKSSSTRSNTFVYKRQTGIPLKDQLKI
QLKNKKSENSMCFIII*ifqiwli*wq*lkpm*qlhskvifilnsafilimni*fiiqmp
rilqlisfyvimvvslaksgmn*wvnlsrlklkmlqiktmhliqyy*kl*krk*kpilki
qqi*kivpyynsqtqvveienkssstrskhici*etdwytikgsknigrfrrnvqss*st
yy*y*pssnvfdctcy*k**i*ameicik*qgyhfh**sidcnwkfqsnl*qs*m*esyi
nihi*ftrysrisflsfnll*sk*qs*ilkslg**kikl*sinwytww*eyn**isiswc
*nw**fks*krwri*sensn*skl**klfksf*kwcfnini*rrn*rssr*klqikkilk
k*kiink**skkinqkn*ffitlr


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllvhnitiiiii*ng*fiisylwspfnnsq**l*yphqff**f*kkinkdi*iikli
ikliiklflkypiiiviiiviiiiiiiiiiiiiiiiiiiiiiiiiiiiiiitmihllila
ii*klqimil*liykvlihl*lkmlvgqymsikiylkmlkkihqih*tvf*kvqinlelq
pllvilkeakplqqi**iiliyhlvvklkqkvyqfifliqmilyllilkvvillyhfl*m
kmkmknlkkliisiklmevln*iifilhvrkqlnhsfkrlllvyqml*fsllmk*hgtin
ki*wpfkrrlklkiqlknkksensmcfiii*ifqiwli*wq*lkpm*qlhskvifilnsa
filimni*fiiqmprilqlisfyvimvvslaksgmn*wvnlsrlklkmlqiktmhliqyy
*kl*krk*kpilkiqqi*klyhiiilklklwklkinhrvqdqthlyirdrlvyh*rinsk
sn*ktknqrtlcvs*lyeyfkyg*sngnd*nlcsnsiqrlfsy*iqpsf***iynllyrc
refynsflfm*sw**vwqkve*isg*icqd*n*kcyksklci*yntirnfkrenenqy*k
snrfkklyhiiilklklwklkinhrvqdqntfvykrqtgiplkdqktledleemfnqvka
htidinqvpmysivpaiknneyeqwkyalnnkdiifidnllivtgsfnptydslecenrt
liftfdlpdipeshfshsiyydpsdkvrylkvsgnrklsyraltgtrggestineypsag
vkignslnlrkdgefdlripieanysknysnhfengvltltfkeeieglpdesck*kky*
knkk**innnlkk*ikkinflll*d


Frame B:
llaywyti*q***lfkmgnllshtygvpsiilnnnysilinffnnfkkr*tkiyk*sn**
sn**sncs*niq***l***********************************r*fic*swq
*fknyrl*ycn*ftkc*yicn*rclldsicq*rft*kc*rrftkstrlsfrrfk*i*ncn
hywlf*krqnlyskfnk*y*ftiw**n*nkrfinlyfsyk*yfiy*ysr**ysstifcr*
k*k*rt*ksl*yqss*wky*ie*sssct*esn*iihsrdcy*fikccnfrc**ndmarst
kynghsked*nsksn*ktknqrtlcvs*lyeyfkyg*sngnd*nlcsnsiqrlfsy*iqp
sf***iynllyrcrefynsflfm*sw**vwqkve*isg*icqd*n*kcyksklci*ynti
rnfkrenenqy*ksnrfknctil*fsnsscgn*k*iieykikhici*etdwytikgstqn
piekqkirelyvfhnymnisnmvdlmamiktyvatpfkgyfhtefslhsdneyiiyytda
enftthfflcnhgsefgkkwnelvgkfvktkiknvtnqnyafdtilletlkekmktnikn
ptdlknctil*fsnsscgn*k*iieykikthlyirdrlvyh*rikkhwki*kkcsiklkh
illiltkfqcirlylllkimnmsngnmh*itrisfsliiy*l*levsiqpmtvlnvrivh
*yshliyqifqnlisliqstmiqvtkldt*ksrvien*vieh*lvhvvvrvqlmnihqlv
lklviv*ilekmenli*efqlkqiivkiiqiilkmvf*h*hlkkklkvfqmkvankknik
kiknnk*iii*knkskklifyyfk


Frame C:
cwptgtqynnnnnylkwviyylilmeslq*FSIIIIVSSSIFLIILKKDKQRYINNQINN
QINNQIVPEISNNNSYNNSDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDSSVNLGN
NLKTTDYDIVIDLQSVDTFVIKDACWTVYVNKDLLKNVKEDSPNPLDCLLEGSNKFRTAT
IIGYFKRGKTFTANLINNINLPSGSKTKTKGLSIYISHTNDTLFIDTQGSNTPLPFFVDE
NENEELKKAYNINQADGSIKLNNLHLARKKATESFIQETAISLSNVVIFVVNEMTWHDQQ
NIMAIQKKIKTQNPIEKQKIRELYVFHNYMNISNMVDLMAMIKTYVATPFKGYFHTEFSL
HSDNEYIIYYTDAENFTTHFFLCNHGSEFGKKWNELVGKFVKTKIKNVTNQNYAFDTILL
ETLKEKMKTNIKNPTDLKIVPYYNSQTQVVEIENKSSSTRSNTFVYKRQTGIPLKDQLKI
QLKNKKSENSMCFIII*ifqiwli*wq*lkpm*qlhskvifilnsafilimni*fiiqmp
rilqlisfyvimvvslaksgmn*wvnlsrlklkmlqiktmhliqyy*kl*krk*kpilki
qqi*kivpyynsqtqvveienkssstrskhici*etdwytikgsknigrfrrnvqss*st
yy*y*pssnvfdctcy*k**i*ameicik*qgyhfh**sidcnwkfqsnl*qs*m*esyi
nihi*ftrysrisflsfnll*sk*qs*ilkslg**kikl*sinwytww*eyn**isiswc
*nw**fks*krwri*sensn*skl**klfksf*kwcfnini*rrn*rssr*klqikkilk
k*kiink**skkinqkn*ffitlr


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15345-1 (Contig-U15345-1Q)
/CSM_Contig/Contig-U15345-1Q.Seq.d
(2595 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15345-1 (Contig-U15345-1Q) /CSM_Contig/Conti... 4155 0.0
Contig-U15007-1 (Contig-U15007-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U09887-1 (Contig-U09887-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U16049-1 (Contig-U16049-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U13156-1 (Contig-U13156-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U12064-1 (Contig-U12064-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U15734-1 (Contig-U15734-1Q) /CSM_Contig/Conti... 40 0.017
Contig-U15723-1 (Contig-U15723-1Q) /CSM_Contig/Conti... 40 0.017
Contig-U15513-1 (Contig-U15513-1Q) /CSM_Contig/Conti... 40 0.017
Contig-U15094-1 (Contig-U15094-1Q) /CSM_Contig/Conti... 40 0.017

>Contig-U15345-1 (Contig-U15345-1Q) /CSM_Contig/Contig-U15345-1Q.Seq.d
Length = 2595

Score = 4155 bits (2096), Expect = 0.0
Identities = 2144/2168 (98%)
Strand = Plus / Plus


Query: 335 cgatgattcatctgttaatcttggcaataatttaaaaactacagattatgatattgtaat 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cgatgattcatctgttaatcttggcaataatttaaaaactacagattatgatattgtaat 394


Query: 395 tgatttacaaagtgttgatacatttgtaattaaagatgcttgttggacagtatatgtcaa 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgatttacaaagtgttgatacatttgtaattaaagatgcttgttggacagtatatgtcaa 454


Query: 455 taaagatttacttaaaaatgttaaagaagattcaccaaatccactagactgtcttttaga 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 taaagatttacttaaaaatgttaaagaagattcaccaaatccactagactgtcttttaga 514


Query: 515 aggttcaaataaatttagaactgcaaccattattggttattttaaaagaggcaaaacctt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aggttcaaataaatttagaactgcaaccattattggttattttaaaagaggcaaaacctt 574


Query: 575 tacagcaaatttaataaataatattaatttaccatctggtagtaaaactaaaacaaaagg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tacagcaaatttaataaataatattaatttaccatctggtagtaaaactaaaacaaaagg 634


Query: 635 tttatcaatttatatttctcatacaaatgatactttatttattgatactcaaggtagtaa 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tttatcaatttatatttctcatacaaatgatactttatttattgatactcaaggtagtaa 694


Query: 695 tactcctctaccattttttgtagatgaaaatgaaaatgaagaacttaaaaaagcttataa 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tactcctctaccattttttgtagatgaaaatgaaaatgaagaacttaaaaaagcttataa 754


Query: 755 tatcaatcaagctgatggaagtattaaattgaataatcttcatcttgcacgtaagaaagc 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tatcaatcaagctgatggaagtattaaattgaataatcttcatcttgcacgtaagaaagc 814


Query: 815 aactgaatcattcattcaagagactgctattagtttatcaaatgttgtaattttcgttgt 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aactgaatcattcattcaagagactgctattagtttatcaaatgttgtaattttcgttgt 874


Query: 875 taatgaaatgacatggcacgatcaacaaaatataatggccattcaaaagaagattaaaac 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 taatgaaatgacatggcacgatcaacaaaatataatggccattcaaaagaagattaaaac 934


Query: 935 tcaaaatccaattgnnnnnnnnnnnntcagagaactctatgtgtttcataattatatgaa 994
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 935 tcaaaatccaattgaaaaacaaaaaatcagagaactctatgtgtttcataattatatgaa 994


Query: 995 tatttcaaatatggttgatctaatggcaatgattaaaacctatgtagcaactccattcaa 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 tatttcaaatatggttgatctaatggcaatgattaaaacctatgtagcaactccattcaa 1054


Query: 1055 aggttattttcatactgaattcagccttcattctgataatgaatatataatttattatac 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 aggttattttcatactgaattcagccttcattctgataatgaatatataatttattatac 1114


Query: 1115 agatgccgagaattttacaactcatttctttttatgtaatcatggtagtgagtttggcaa 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 agatgccgagaattttacaactcatttctttttatgtaatcatggtagtgagtttggcaa 1174


Query: 1175 aaagtggaatgaattagtgggtaaatttgtcaagactaaaattaaaaatgttacaaatca 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 aaagtggaatgaattagtgggtaaatttgtcaagactaaaattaaaaatgttacaaatca 1234


Query: 1235 aaactatgcatttgatacaatactattagaaactttaaaagagaaaatgaaaaccaatat 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 aaactatgcatttgatacaatactattagaaactttaaaagagaaaatgaaaaccaatat 1294


Query: 1295 taaaaatccaacagatttaaaaattgtaccatattataattctcaaactcaagttgtgga 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 taaaaatccaacagatttaaaaattgtaccatattataattctcaaactcaagttgtgga 1354


Query: 1355 aattgaaaataaatcatcgagtacaagatcaaacacatttgtatataagagacagactgg 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 aattgaaaataaatcatcgagtacaagatcaaacacatttgtatataagagacagactgg 1414


Query: 1415 tataccattaaaggatcaactcaaaatccaattgnnnnnnnnnnnntcagagaactctat 1474
|||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1415 tataccattaaaggatcaactcaaaatccaattgaaaaacaaaaaatcagagaactctat 1474


Query: 1475 gtgtttcataattatatgaatatttcaaatatggttgatctaatggcaatgattaaaacc 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 gtgtttcataattatatgaatatttcaaatatggttgatctaatggcaatgattaaaacc 1534


Query: 1535 tatgtagcaactccattcaaaggttattttcatactgaattcagccttcattctgataat 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 tatgtagcaactccattcaaaggttattttcatactgaattcagccttcattctgataat 1594


Query: 1595 gaatatataatttattatacagatgccgagaattttacaactcatttctttttatgtaat 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 gaatatataatttattatacagatgccgagaattttacaactcatttctttttatgtaat 1654


Query: 1655 catggtagtgagtttggcaaaaagtggaatgaattagtgggtaaatttgtcaagactaaa 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1655 catggtagtgagtttggcaaaaagtggaatgaattagtgggtaaatttgtcaagactaaa 1714


Query: 1715 attaaaaatgttacaaatcaaaactatgcatttgatacaatactattagaaactttaaaa 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 attaaaaatgttacaaatcaaaactatgcatttgatacaatactattagaaactttaaaa 1774


Query: 1775 gagaaaatgaaaaccaatattaaaaatccaacagatttaaaaaattgtaccatattataa 1834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1775 gagaaaatgaaaaccaatattaaaaatccaacagatttaaaaaattgtaccatattataa 1834


Query: 1835 ttctcaaactcaagttgtggaaattgaaaataaatcatcgagtacaagatcaaaacacat 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1835 ttctcaaactcaagttgtggaaattgaaaataaatcatcgagtacaagatcaaaacacat 1894


Query: 1895 ttgtatataagagacagactggtataccattaaaggatcaaaaaacattggaagatttag 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1895 ttgtatataagagacagactggtataccattaaaggatcaaaaaacattggaagatttag 1954


Query: 1955 aagaaatgttcaatcaagttaaagcacatactattgatattaaccaagttccaatgtatt 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1955 aagaaatgttcaatcaagttaaagcacatactattgatattaaccaagttccaatgtatt 2014


Query: 2015 cgattgtacctgctattaaaaataatgaatatgagcaatggaaatatgcattaaataaca 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 cgattgtacctgctattaaaaataatgaatatgagcaatggaaatatgcattaaataaca 2074


Query: 2075 aggatatcattttcattgataatctattgattgtaactggaagtttcaatccaacctatg 2134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2075 aggatatcattttcattgataatctattgattgtaactggaagtttcaatccaacctatg 2134


Query: 2135 acagtcttgaatgtgagaatcgtacattaatattcacatttgatttaccagatattccag 2194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2135 acagtcttgaatgtgagaatcgtacattaatattcacatttgatttaccagatattccag 2194


Query: 2195 aatctcatttctctcattcaatctactatgatccaagtgacaaagttagatacttaaaag 2254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2195 aatctcatttctctcattcaatctactatgatccaagtgacaaagttagatacttaaaag 2254


Query: 2255 tctcgggtaatagaaaattaagttatagagcattaactggtacacgtggtggtgagagta 2314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2255 tctcgggtaatagaaaattaagttatagagcattaactggtacacgtggtggtgagagta 2314


Query: 2315 caattaatgaatatccatcagctggtgttaaaattggtaatagtttaaatcttagaaaag 2374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2315 caattaatgaatatccatcagctggtgttaaaattggtaatagtttaaatcttagaaaag 2374


Query: 2375 atggagaatttgatctgagaattccaattgaagcaaattatagtaaaaattattcaaatc 2434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2375 atggagaatttgatctgagaattccaattgaagcaaattatagtaaaaattattcaaatc 2434


Query: 2435 attttgaaaatggtgttttaacattaacatttaaagaagaaattgaaggtcttccagatg 2494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2435 attttgaaaatggtgttttaacattaacatttaaagaagaaattgaaggtcttccagatg 2494


Query: 2495 aaagttgc 2502
||||||||
Sbjct: 2495 aaagttgc 2502


Score = 244 bits (123), Expect = 6e-64
Identities = 123/123 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactggtacacaatataacaataataataattatttaaaatgggtaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgttggcctactggtacacaatataacaataataataattatttaaaatgggtaattt 60


Query: 61 attatctcatacttatggagtcccttcaataattctcaataataattatagtatcctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attatctcatacttatggagtcccttcaataattctcaataataattatagtatcctcat 120


Query: 121 caa 123
|||
Sbjct: 121 caa 123


Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 2573 ttaattttttattactttaagat 2595
|||||||||||||||||||||||
Sbjct: 2573 ttaattttttattactttaagat 2595


>Contig-U15007-1 (Contig-U15007-1Q) /CSM_Contig/Contig-U15007-1Q.Seq.d
Length = 1325

Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 31 ataataataattatttaaaatg 52
||||||||||||||||||||||
Sbjct: 134 ataataataattatttaaaatg 155


>Contig-U09887-1 (Contig-U09887-1Q) /CSM_Contig/Contig-U09887-1Q.Seq.d
Length = 1918

Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 25 ataacaataataataattattt 46
||||||||||||||||||||||
Sbjct: 1785 ataacaataataataattattt 1806


Score = 34.2 bits (17), Expect = 1.0
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1 actgttggcctactggtacac 21
|||||||||||||||| ||||
Sbjct: 2 actgttggcctactggaacac 22


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 79,428
Number of Sequences: 8402
Number of extensions: 79428
Number of successful extensions: 15424
Number of sequences better than 10.0: 1125
length of query: 2595
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2578
effective length of database: 7,932,708
effective search space: 20450521224
effective search space used: 20450521224
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1.24
Homology vs DNA
Query= Contig-U15345-1 (Contig-U15345-1Q) /CSM_Contig/Contig-U15345-1Q.Seq.d
(2595 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ342764) Dictyostelium discoideum cDNA clone:dda1b13, 3' e... 1219 0.0 2
(BJ345181) Dictyostelium discoideum cDNA clone:dda21k21, 3' ... 1203 0.0 2
(BJ350687) Dictyostelium discoideum cDNA clone:dda40o15, 3' ... 1193 0.0 2
(BJ350079) Dictyostelium discoideum cDNA clone:dda38j16, 3' ... 1193 0.0 2
(BJ344124) Dictyostelium discoideum cDNA clone:dda18b18, 3' ... 1164 0.0 2
(BJ380658) Dictyostelium discoideum cDNA clone:ddc38k19, 3' ... 1156 0.0 2
(BJ380034) Dictyostelium discoideum cDNA clone:ddc36d24, 3' ... 1150 0.0 2
(BJ325582) Dictyostelium discoideum cDNA clone:dda1b13, 5' e... 1114 0.0 1
(BJ354358) Dictyostelium discoideum cDNA clone:dda53i12, 3' ... 1112 0.0 2
(BJ352837) Dictyostelium discoideum cDNA clone:dda48h01, 3' ... 1094 0.0 4
(C92215) Dictyostelium discoideum slug cDNA, clone SSD243. 1082 0.0 1
(BJ327819) Dictyostelium discoideum cDNA clone:dda21k21, 5' ... 1029 0.0 4
(BJ354441) Dictyostelium discoideum cDNA clone:dda53j18, 3' ... 1019 0.0 2
(BJ324737) Dictyostelium discoideum cDNA clone:dda7a22, 5' e... 999 0.0 3
(BJ380651) Dictyostelium discoideum cDNA clone:ddc38i23, 3' ... 993 0.0 2
(BJ355561) Dictyostelium discoideum cDNA clone:dda57b13, 3' ... 1033 0.0 1
(BJ326918) Dictyostelium discoideum cDNA clone:dda18b18, 5' ... 704 0.0 4
(U82514) Dictyostelium discoideum random slug cDNA6 protein ... 965 0.0 1
(BJ381961) Dictyostelium discoideum cDNA clone:ddc43p09, 3' ... 779 0.0 2
(BJ439968) Dictyostelium discoideum cDNA clone:ddv42p05, 3' ... 361 9e-95 1
(BJ366412) Dictyostelium discoideum cDNA clone:ddc38k19, 5' ... 151 3e-65 3
(BJ392062) Dictyostelium discoideum cDNA clone:dds26b07, 5' ... 234 1e-56 1
(BJ334866) Dictyostelium discoideum cDNA clone:dda48h01, 5' ... 151 2e-56 3
(BJ337452) Dictyostelium discoideum cDNA clone:dda57b13, 5' ... 151 3e-51 3
(BJ332298) Dictyostelium discoideum cDNA clone:dda38j16, 5' ... 151 3e-51 3
(BJ366404) Dictyostelium discoideum cDNA clone:ddc38i23, 5' ... 151 4e-41 2
(BJ367642) Dictyostelium discoideum cDNA clone:ddc43p09, 5' ... 151 4e-41 2
(BJ332749) Dictyostelium discoideum cDNA clone:dda40o15, 5' ... 151 4e-41 2
(BJ391798) Dictyostelium discoideum cDNA clone:dds25b07, 5' ... 151 4e-41 2
(BJ403472) Dictyostelium discoideum cDNA clone:dds25b07, 3' ... 145 2e-39 2
(BJ326919) Dictyostelium discoideum cDNA clone:dda18c13, 5' ... 151 8e-36 2
(BJ344125) Dictyostelium discoideum cDNA clone:dda18c13, 3' ... 149 6e-31 1
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 46 6e-07 17
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 9e-07 16
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 5e-06 16
(AL844509) Plasmodium falciparum chromosome 13. 40 7e-06 17
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 44 2e-05 19
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 42 7e-05 16
(FH335808) CHO_OF4273xo16r1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 1e-04 4
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 38 2e-04 22
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 34 2e-04 16
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 42 2e-04 14
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 36 4e-04 18
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 34 4e-04 23
(CP000963) Clostridium botulinum A3 str. Loch Maree plasmid ... 32 5e-04 20
(AL096782) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 38 8e-04 10
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 36 0.001 16
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 48 0.001 10
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 42 0.002 10
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 34 0.002 17
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 38 0.004 16
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 0.004 15
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 38 0.007 15
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 36 0.008 17
(AL034557) Plasmodium falciparum MAL4P1. 36 0.011 16
(AL844507) Plasmodium falciparum chromosome 8. 48 0.011 13
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 36 0.014 19
(CP000025) Campylobacter jejuni RM1221, complete genome. 36 0.018 22
(CP000940) Clostridium botulinum B1 str. Okra plasmid pCLD, ... 34 0.018 13
(AE014844) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.019 17
(AL031745) Plasmodium falciparum DNA from MAL1P2. 34 0.022 15
(BJ325636) Dictyostelium discoideum cDNA clone:dda1p18, 5' e... 38 0.023 2
(BJ411624) Dictyostelium discoideum cDNA clone:ddv5l06, 5' e... 36 0.023 2
(AC148602) Medicago truncatula chromosome 6 clone mth2-108p9... 36 0.032 8
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 32 0.038 19
(EG137029) MSAM243937_1463_2699 LCM-dissected maize inbred l... 42 0.042 2
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI... 34 0.053 13
(AL844506) Plasmodium falciparum chromosome 7. 42 0.061 14
(AM698041) Vanderwaltozyma polyspora partial mitochondrial g... 34 0.066 7
(BX537320) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 38 0.067 12
(EK298477) 1095462355552 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.071 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.081 13
(CP000538) Campylobacter jejuni subsp. jejuni 81-176, comple... 38 0.084 20
(BJ389134) Dictyostelium discoideum cDNA clone:dds17j18, 5' ... 38 0.085 2
(BJ325568) Dictyostelium discoideum cDNA clone:dda1n08, 5' e... 38 0.085 2
(BJ360588) Dictyostelium discoideum cDNA clone:ddc6i23, 5' e... 38 0.085 2
(BJ363217) Dictyostelium discoideum cDNA clone:ddc25i15, 5' ... 38 0.085 2
(BJ359743) Dictyostelium discoideum cDNA clone:ddc2d09, 5' e... 38 0.086 2
(BJ324328) Dictyostelium discoideum cDNA clone:dda5e23, 5' e... 38 0.087 2
(BJ412466) Dictyostelium discoideum cDNA clone:ddv8h18, 5' e... 38 0.087 2
(BJ394893) Dictyostelium discoideum cDNA clone:dds36j24, 5' ... 36 0.088 2
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 38 0.090 9
(AF396436) Tetrahymena thermophila strain SB210 mitochondrio... 40 0.10 8
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 32 0.12 14
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 36 0.12 15
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 42 0.13 15
(BX119918) Zebrafish DNA sequence from clone CH211-202H22 in... 44 0.15 8
(FB571377) Sequence 244 from Patent EP1865317. 42 0.16 8
(FB571321) Sequence 188 from Patent EP1865317. 42 0.16 8
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.18 24
(BJ424664) Dictyostelium discoideum cDNA clone:ddv53l06, 5' ... 32 0.20 4
(EI327622) GM_WBc0065K11.f GM_WBc Glycine max genomic clone ... 44 0.21 2
(BJ336798) Dictyostelium discoideum cDNA clone:dda55m04, 5' ... 36 0.22 3
(AF114922) Saccharomyces paradoxus NRRL Y-17217 small subuni... 36 0.23 4
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 38 0.23 13
(BJ392418) Dictyostelium discoideum cDNA clone:dds27i13, 5' ... 34 0.24 4
(CC002125) PUDFU77TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 0.24 2
(AX344575) Sequence 26 from Patent WO0200932. 38 0.24 7
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 32 0.24 23
(CU914512) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.25 2
(FB571382) Sequence 249 from Patent EP1865317. 32 0.25 14
(AX392736) Sequence 26 from Patent WO0212526. 34 0.25 10
(AR707083) Sequence 26 from patent US 6933145. 34 0.25 10
(AF114911) Saccharomyces paradoxus CBS2908 small subunit rib... 36 0.25 4
(AP006686) Lotus japonicus genomic DNA, chromosome 2, clone:... 38 0.25 6
(CC427858) PUHCY31TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 0.25 2
(BJ337293) Dictyostelium discoideum cDNA clone:dda56n20, 5' ... 32 0.25 4
(AL111168) Campylobacter jejuni subsp. jejuni NCTC 11168 com... 36 0.25 20
(CC427860) PUHCY31TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 0.26 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 40 0.27 13
(EU274658) Buchnera aphidicola cell wall biosynthesis/cell d... 32 0.27 7
(ED693924) GM_WBb0032G03.f GM_WBb Glycine max genomic clone ... 44 0.27 2
(AX344574) Sequence 25 from Patent WO0200932. 36 0.27 17
(CG098414) PUFOO10TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 0.29 2
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 0.29 12
(AL035476) Plasmodium falciparum MAL4P3. 34 0.30 18
(CG098412) PUFOO10TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 42 0.30 2
(CT237236) Sus scrofa genomic clone CH242-179M7, genomic sur... 40 0.31 2
(BJ325631) Dictyostelium discoideum cDNA clone:dda1o14, 5' e... 38 0.32 2
(AL035475) Plasmodium falciparum MAL4P2. 36 0.32 13
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.32 15
(BJ328764) Dictyostelium discoideum cDNA clone:dda29m09, 5' ... 34 0.33 2
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 0.33 16
(BJ414320) Dictyostelium discoideum cDNA clone:ddv18c19, 5' ... 36 0.33 2
(AL034556) Plasmodium falciparum MAL3P5. 34 0.41 10
(AC219219) Solanum lycopersicum chromosome 6 clone C06SLe013... 50 0.42 1
(AC233164) Biomphalaria glabrata chromosome UNK clone BG_BBa... 50 0.42 1
(AC181293) Strongylocentrotus purpuratus clone R3-115J18, WO... 50 0.42 1
(AC181276) Strongylocentrotus purpuratus clone R3-115J23, WO... 50 0.42 1
(AC178369) Strongylocentrotus purpuratus clone R3-1114D5, WO... 50 0.42 1
(AC166308) Bos taurus clone CH240-171A5, WORKING DRAFT SEQUE... 50 0.42 1
(FH312005) CHO_OF4426xi17r1.ab1 CHO_OF4 Nicotiana tabacum ge... 50 0.42 1
(EK332727) 1095467030117 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.42 1
(EJ888767) 1093018431755 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.42 1
(EJ780357) 1093017246182 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.42 1
(BZ016700) oeh50a06.g1 B.oleracea002 Brassica oleracea genom... 50 0.42 1
(AM088848) Lutzomyia longipalpis EST clone NSFM-87f12, seque... 50 0.42 1
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 38 0.43 14
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 34 0.43 16
(L36886) Saccharomyces cerevisiae mitochondrion transfer RNA... 40 0.44 4
(AB292225) Campylobacter lari dnaK gene for chaperone protei... 36 0.50 3
(AM429445) Vitis vinifera contig VV78X023295.3, whole genome... 34 0.51 5
(AL034558) Plasmodium falciparum MAL3P2. 32 0.52 15
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 0.54 17
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.55 9
(AY459293) Plasmodium falciparum histone acetyltransferase (... 32 0.60 6
(CR940352) Theileria annulata genomic DNA chromosome 3. 36 0.61 20
(AU087043) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 42 0.61 2
(BJ391453) Dictyostelium discoideum cDNA clone:dds13p22, 5' ... 38 0.64 2
(AC192803) Pan troglodytes BAC clone CH251-429M12 from chrom... 36 0.66 9
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 0.66 17
(AZ152586) SP_0047_B1_G10_SP6E Strongylocentrotus purpuratus... 44 0.66 2
(AJ511533) Candida glabrata complete mitochondrial genome. 34 0.66 5
(AE017308) Mycoplasma mobile 163K complete genome. 36 0.68 23
(FB571326) Sequence 193 from Patent EP1865317. 32 0.69 13
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 36 0.77 10
(BJ370050) Dictyostelium discoideum cDNA clone:ddc52p21, 5' ... 38 0.77 2
(BJ363046) Dictyostelium discoideum cDNA clone:ddc24d20, 5' ... 36 0.78 3
(BJ362986) Dictyostelium discoideum cDNA clone:ddc24p07, 5' ... 36 0.78 3
(AX458634) Sequence 180 from Patent WO0246454. 32 0.79 9
(FH124140) CHO_OF3304xk09r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 0.86 2
(AM488049) Vitis vinifera contig VV78X255082.2, whole genome... 32 0.87 4
(BJ404946) Dictyostelium discoideum cDNA clone:dds30j04, 3' ... 42 0.88 2
(AC201589) Strongylocentrotus purpuratus clone R3-4019B8, WO... 36 0.89 2
(AL935166) Zebrafish DNA sequence from clone CH211-199C19 in... 34 0.91 2
(CR853302) Zebrafish DNA sequence from clone DKEY-91M3 in li... 36 0.94 11
(BJ392490) Dictyostelium discoideum cDNA clone:dds27h21, 5' ... 36 0.95 2
(AP007377) Lotus japonicus genomic DNA, chromosome 2, clone:... 38 0.97 7
(BD460219) Diagnosis of Diseases Associated with Cell Cycle. 36 1.0 5
(BD452141) Diagnosis of Diseases Associated with Cell Cycle. 36 1.0 5
(AX348940) Sequence 398 from Patent WO0202807. 36 1.0 5
(AX344169) Sequence 16 from Patent WO0200926. 36 1.0 5
(AX251755) Sequence 16 from Patent WO0168911. 36 1.0 5
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 1.0 14
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 36 1.0 16
(AZ529935) ENTCE24TF Entamoeba histolytica Sheared DNA Entam... 42 1.1 2
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 38 1.1 13
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 34 1.1 15
(DN570305) 92309675 Sea Urchin primary mesenchyme cell cDNA ... 42 1.2 2
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 1.2 13
(BJ370057) Dictyostelium discoideum cDNA clone:ddc52a05, 5' ... 34 1.2 2
(L36897) Saccharomyces cerevisiae mitochondrion oxi3 gene, a... 36 1.2 9
(BJ365230) Dictyostelium discoideum cDNA clone:ddc34g18, 5' ... 36 1.2 2
(M63839) Saccharomyces cerevisiae mitochondrial sequence-spe... 32 1.2 4
(E03525) gDNA encoding subunit of endonuclease Sce1. 32 1.2 4
(J03300) Saccharomyces bayanus mitochondrial ATPase, subunit... 32 1.2 4
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete... 38 1.3 21
(CT573233) Zebrafish DNA sequence from clone DKEY-191G9 in l... 40 1.3 9
(AC151512) Dasypus novemcinctus clone VMRC5-442J8, WORKING D... 40 1.4 10
(X02421) Yeast mitochondrial RF3 gene for maturase-like prot... 32 1.4 4
(AC092659) Homo sapiens BAC clone RP11-495I15 from 4, comple... 32 1.4 11
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 34 1.5 16
(BX649491) Zebrafish DNA sequence from clone RP71-39F1 in li... 34 1.5 9
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 1.5 13
(CR759803) Zebrafish DNA sequence from clone DKEY-189M18 in ... 34 1.6 10
(EG413788) SAAH-aab14d10.b1 Agen 0058 Schmidtea mediterranea... 32 1.6 4
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 36 1.6 11
(BJ411789) Dictyostelium discoideum cDNA clone:ddv5f24, 5' e... 34 1.6 3
(AP005672) Physcomitrella patens subsp. patens chloroplast D... 36 1.6 11
(BJ386786) Dictyostelium discoideum cDNA clone:dds10n18, 5' ... 38 1.6 2
(FB571359) Sequence 226 from Patent EP1865317. 36 1.7 15
(FB571303) Sequence 170 from Patent EP1865317. 36 1.7 15
(CU138502) Zebrafish DNA sequence from clone CH211-102B16 in... 48 1.7 1
(BX897690) Zebrafish DNA sequence from clone CH211-197O9 in ... 48 1.7 1
(BX324184) Zebrafish DNA sequence from clone CH211-184N21 in... 48 1.7 1
(AL954840) Zebrafish DNA sequence from clone DKEY-29K19 in l... 48 1.7 1
(AC168310) Mus musculus chromosome 8, clone RP24-345M22, com... 48 1.7 1
(CU329671) Schizosaccharomyces pombe chromosome II. 48 1.7 1
(CS468878) Sequence 69 from Patent EP1748080. 48 1.7 1
(CS419355) Sequence 69 from Patent WO2006094836. 48 1.7 1
(FP016233) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 1.7 1
(CU457799) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 1.7 1
(BX663535) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 1.7 1
(AC226200) Zea mays chromosome 4 clone ZMMBBb-587J15; ZMMBBb... 48 1.7 1
(AC204259) Zea mays chromosome 4 clone ZMMBBb-433O12; ZMMBBb... 48 1.7 1
(AC201121) Strongylocentrotus purpuratus clone R3-13O9, WORK... 48 1.7 1
(AC194200) Zea mays chromosome 10 clone CH201-320D2; ZMMBBc0... 48 1.7 1
(AC184486) Strongylocentrotus purpuratus clone R3-1110M2, WO... 48 1.7 1
(AC179909) Strongylocentrotus purpuratus clone R3-1003F4, WO... 48 1.7 1
(AC178211) Strongylocentrotus purpuratus clone R3-3085F10, W... 48 1.7 1
(AC168456) Strongylocentrotus purpuratus clone R3-35M12, WOR... 48 1.7 1
(AY432350) Aedes aegypti ASAP ID: 43092 unknown mRNA sequence. 48 1.7 1
(EJ943744) 1093018901525 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.7 1
(EJ747634) 1092963012003 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.7 1
(EJ740728) 1092962014883 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.7 1
(CJ482382) Macaca fascicularis mRNA, clone: QtrA-18326, 5' e... 48 1.7 1
(CJ446559) Macaca fascicularis mRNA, clone: QflA-11853, 5' e... 48 1.7 1
(EY303276) CAWX16622.rev CAWX Helobdella robusta Primary Ear... 48 1.7 1
(EV304723) G809P565RD8.T0 Culex pipiens quinquefasciatus Fil... 48 1.7 1
(AY691418) Paracoccus nothofagicola cytochrome b (cytb) gene... 38 1.7 4
(CR450746) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 1.8 10
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 36 1.8 11
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 40 1.8 15
(AL845302) Zebrafish DNA sequence from clone CH211-108C6 in ... 38 1.9 7
(AE017263) Mesoplasma florum L1 complete genome. 36 1.9 20
(CJ460820) Macaca fascicularis mRNA, clone: QmoA-13632, 5' e... 30 1.9 4
(CU693457) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 1.9 5
(AL929326) Zebrafish DNA sequence from clone BUSM1-SL11 in l... 36 2.0 9
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 38 2.0 20
(ED758968) GM_WBb0128N14.r GM_WBb Glycine max genomic clone ... 36 2.0 4
(AL035477) Plasmodium falciparum MAL4P4. 40 2.1 16
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 2.1 16
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 2.2 12
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4... 34 2.2 15
(AC145455) Cicer arietinum strain ICC4958 clone cp1-89p20, W... 38 2.2 5
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 38 2.2 22
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 36 2.2 15
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 38 2.2 22
(BQ298240) sao57c12.y1 Gm-c1073 Glycine max cDNA clone SOYBE... 42 2.3 2
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 36 2.3 16
(BJ371149) Dictyostelium discoideum cDNA clone:ddc56i20, 5' ... 40 2.4 2
(BM171197) EST573720 PyBS Plasmodium yoelii yoelii cDNA clon... 38 2.4 2
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 32 2.4 16
(BJ390980) Dictyostelium discoideum cDNA clone:dds14b15, 5' ... 38 2.4 2
(BX511164) Zebrafish DNA sequence from clone DKEY-63J1 in li... 44 2.5 6
(BJ396878) Dictyostelium discoideum cDNA clone:dds44d11, 5' ... 34 2.5 3
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 42 2.5 24
(BW304653) Ciona intestinalis cDNA, clone:cinc033h09, 5' end... 44 2.5 2
(CI040468) Oryza sativa Japonica Group cDNA, clone: 009-M195... 40 2.5 2
(BX784036) Zebrafish DNA sequence from clone CH211-223P14 in... 38 2.5 8
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 38 2.5 7
(CI024754) Oryza sativa Japonica Group cDNA, clone: 009-M010... 40 2.6 2
(FK432817) 454GmaGlobSeed167449 Soybean Seeds Containing Glo... 42 2.6 2
(AL008970) Plasmodium falciparum MAL3P4. 34 2.6 11
(Z98547) Plasmodium falciparum MAL3P3. 30 2.6 13
(AY863213) Smittium culisetae mitochondrion, complete genome. 42 2.7 8
(CX635014) taj52e06.x2 Hydra EST UCI 5 Hydra magnipapillata ... 42 2.7 2
(AL353734) Human DNA sequence from clone RP11-430K10 on chro... 42 2.7 10
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co... 34 2.8 11
(BJ363398) Dictyostelium discoideum cDNA clone:ddc26n11, 5' ... 34 2.8 3
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 2.8 16
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 42 2.9 21
(DX343595) OR_ABa0271P20.r OR_ABa Oryza ridleyi genomic clon... 42 2.9 2
(AC145664) Homo sapiens chromosome UNK clone XXFOS-83474G2, ... 34 2.9 6
(AL136447) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 2.9 10
(AM450106) Vitis vinifera contig VV78X005894.8, whole genome... 32 3.0 9
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 36 3.0 16
(EL916901) NY4Th2_6_B09.b1_A039 NY4 theronts Ichthyophthiriu... 36 3.0 2
(AC175465) Ornithorhynchus anatinus BAC clone OABb-36D11 fro... 46 3.0 7
(V00697) Yeast (S. cerevisiae) mitochondrial genes for sever... 40 3.0 3
(BV419438) S229P671FD8.T0 GermanShepherd Canis familiaris ST... 36 3.0 2
(BX649533) Zebrafish DNA sequence from clone DKEY-31K12 in l... 34 3.0 7
(AC106834) Mus musculus chromosome 19, clone RP24-132H7, com... 36 3.0 9
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 34 3.0 8
(AX348654) Sequence 112 from Patent WO0202807. 32 3.1 6
(AX345653) Sequence 724 from Patent WO0200928. 32 3.1 6
(AX344263) Sequence 110 from Patent WO0200926. 32 3.1 6
(CP000361) Arcobacter butzleri RM4018, complete genome. 38 3.1 20
(GD765613) 454GmaGlobSeed508262 Soybean Seeds Containing Glo... 42 3.2 2
(AC186777) Trichinella spiralis chromosome UNK clone TS195-3... 34 3.2 14
(AC186700) Microcebus murinus clone CH257-484O6, WORKING DRA... 32 3.2 2
(EI784646) CHORI518008H04TR BAC library from the breast cell... 42 3.2 2
(AL136980) Human DNA sequence from clone RP11-207C16 on chro... 36 3.2 8
(AC148949) Otolemur garnettii clone CH256-222J5, WORKING DRA... 32 3.2 2
(AC148850) Otolemur garnettii clone CH256-315K17, WORKING DR... 32 3.2 2
(AC187419) Microcebus murinus clone CH257-190O14, WORKING DR... 32 3.2 2
(AC177181) Strongylocentrotus purpuratus clone R3-4018C22, W... 34 3.3 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 34 3.3 12
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 36 3.3 15
(EY603683) CAWU7159.rev CAWU Capitella sp. I ECS-2004 Primar... 38 3.3 2
(BJ326720) Dictyostelium discoideum cDNA clone:dda17b23, 5' ... 32 3.3 4
(EY533834) CAPF8131.rev CAPF Capitella sp. I ECS-2004 whole ... 38 3.3 2
(AP009791) Lotus japonicus genomic DNA, clone: LjT37I20, TM2... 36 3.3 12
(AC180635) Strongylocentrotus purpuratus clone R3-3090K24, W... 34 3.3 8
(AE001432) Plasmodium falciparum 3D7 chromosome 2 section 69... 34 3.4 7
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 40 3.4 20
(BX322647) Zebrafish DNA sequence from clone DKEYP-86F8 in l... 36 3.4 9
(EJ182638) 1092344133264 Global-Ocean-Sampling_GS-27-01-01-1... 42 3.5 2
(AC212484) Pongo abelii chromosome 13 clone CH276-331F10, WO... 34 3.5 13
(CT737172) Zebrafish DNA sequence from clone DKEY-284O11 in ... 36 3.5 7
(AC006278) Plasmodium falciparum chromosome 12 clone PFYAC34... 34 3.6 13
(EJ877572) 1093018377835 Global-Ocean-Sampling_GS-30-02-01-1... 42 3.6 2
(DD061484) Methods and nucleic acids for the analysis of he... 30 3.6 8
(AX599046) Sequence 386 from Patent WO02077272. 30 3.6 8
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 3.6 11
(EJ480693) 1095403467139 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.6 2
(EJ109767) 1092343150555 Global-Ocean-Sampling_GS-27-01-01-1... 36 3.6 2
(CP000976) Borrelia duttonii Ly, complete genome. 38 3.7 21
(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (... 36 3.8 5
(CT025588) Zebrafish DNA sequence from clone DKEY-29B11 in l... 40 3.9 7
(AM644989) Entamoeba moshkovskii FIC GSS, clone mosh019e08.p1k. 40 3.9 3
(BQ611134) sap55e12.y1 Gm-c1087 Glycine max cDNA clone SOYBE... 42 3.9 2
(CU929214) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 3.9 9
(Z83839) Human DNA sequence from clone RP1-127L4 on chromoso... 34 4.0 4
(EY603684) CAWU7159.fwd CAWU Capitella sp. I ECS-2004 Primar... 38 4.0 2
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 40 4.0 21
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 34 4.0 6
(BH706807) BOMHO13TR BO_2_3_KB Brassica oleracea genomic clo... 34 4.0 4
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI... 34 4.0 14
(AF506028) Poncirus trifoliata citrus tristeza virus resista... 34 4.1 13
(EI895294) VUH1-77O22TV VUUBBa (VUH1) Vigna unguiculata geno... 40 4.1 3
(EJ531458) 1092955231036 Global-Ocean-Sampling_GS-29-01-01-1... 46 4.1 2
(BX666064) Zebrafish DNA sequence from clone DKEY-6N3 in lin... 34 4.1 9
(DQ102703) Coreana raphaelis mitochondrion, complete genome. 30 4.2 9
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 36 4.2 12
(BJ388142) Dictyostelium discoideum cDNA clone:dds8j06, 5' e... 36 4.3 2
(AC154400) Mus musculus BAC clone RP23-163P4 from chromosome... 38 4.4 12
(CJ490482) Macaca fascicularis mRNA, clone: QtsA-18275, 5' e... 34 4.4 3
(BJ370047) Dictyostelium discoideum cDNA clone:ddc52o24, 5' ... 34 4.4 2
(BJ415807) Dictyostelium discoideum cDNA clone:ddv23f22, 5' ... 32 4.4 2
(BJ415694) Dictyostelium discoideum cDNA clone:ddv23l07, 5' ... 34 4.4 2
(BJ328805) Dictyostelium discoideum cDNA clone:dda29f17, 5' ... 36 4.4 2
(BJ332005) Dictyostelium discoideum cDNA clone:dda37j23, 5' ... 36 4.4 2
(AM479620) Vitis vinifera contig VV78X070897.5, whole genome... 38 4.4 3
(CJ452493) Macaca fascicularis mRNA, clone: QflA-18151, 5' e... 36 4.5 3
(CJ469534) Macaca fascicularis mRNA, clone: QnpA-20666, 5' e... 40 4.5 3
(AX344560) Sequence 11 from Patent WO0200932. 38 4.5 17
(AC093951) Rattus norvegicus clone CH230-1K21, WORKING DRAFT... 46 4.5 8
(EJ412611) 1093012160634 Global-Ocean-Sampling_GS-28-01-01-1... 32 4.5 3
(AC210510) Populus trichocarpa clone POP054-E03, complete se... 38 4.5 8
(CU693458) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 4.5 10
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 4.5 15
(BX890590) Zebrafish DNA sequence from clone DKEY-15H19 in l... 44 4.6 7
(EJ306997) 1095390102820 Global-Ocean-Sampling_GS-27-01-01-1... 40 4.8 3
(EX652888) 256786998 Pea aphid whole body normalized full le... 32 4.8 4
(BJ325633) Dictyostelium discoideum cDNA clone:dda1o16, 5' e... 38 4.8 2
(CT599605) Danio rerio EST, clone ZF_mu_23l22 5'. 40 4.8 2
(EC826268) SME00005339 esmbsro2 Sawyeria marylandensis cDNA,... 30 4.9 4
(CU855619) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 38 4.9 5
(DQ855265) Glycine max clone BAC GM-WBb0040I14, *** SEQUENCI... 36 4.9 14
(CT599606) Danio rerio EST, clone ZF_mu_23l22 3'. 40 5.0 2
(AX345589) Sequence 660 from Patent WO0200928. 36 5.1 5
(CE398619) tigr-gss-dog-17000334536836 Dog Library Canis lup... 36 5.2 2
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 32 5.2 8
(AC187344) Trichinella spiralis BAC clone TS195-42H12 from c... 38 5.3 11
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 34 5.4 14
(CP000993) Borrelia recurrentis A1, complete genome. 38 5.4 20
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2... 34 5.7 15
(AE014838) Plasmodium falciparum 3D7 chromosome 11 section 3... 34 5.7 16
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 34 5.8 15
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 36 5.9 16
(AM448357) Vitis vinifera, whole genome shotgun sequence, co... 34 6.1 5
(AC024802) Caenorhabditis elegans cosmid Y51H7BL, complete s... 34 6.2 6
(BF009978) ss89c08.y1 Gm-c1064 Glycine max cDNA clone GENOME... 42 6.2 2
(AB292224) Campylobacter lari dnaK gene for chaperone protei... 34 6.2 3
(AB292222) Campylobacter lari dnaK gene for chaperone protei... 34 6.2 3
(CD404691) Gm_ck2768 Soybean induced by Salicylic Acid Glyci... 42 6.2 2
(AC212861) Pongo abelii chromosome 1 clone CH276-236D6, WORK... 38 6.2 8
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 32 6.3 21
(BG237652) sab07h07.y1 Gm-c1071 Glycine max cDNA clone GENOM... 42 6.3 2
(FF321378) 280412243 Pea aphid whole body normalized full le... 32 6.3 4
(AP008983) Clostridium phage c-st genomic DNA, complete genome. 34 6.3 13
(AC204201) Ornithorhynchus anatinus clone OA_Bb-567M2, WORKI... 38 6.3 9
(EG150540) MSAM227209_1329_1047 LCM-dissected maize inbred l... 38 6.4 2
(AY170918) Dictyostelium discoideum pats1 gene, partial cds. 40 6.4 3
(EF494740) Blastocystis sp. NandII mitochondrion, complete g... 34 6.4 7
(CU137652) Zebrafish DNA sequence from clone DKEY-70B23 in l... 38 6.4 8
(AW309879) sf26a05.x1 Gm-c1028 Glycine max cDNA clone GENOME... 42 6.5 2
(AC184573) Strongylocentrotus purpuratus clone R3-3059E12, W... 34 6.5 10
(AC180699) Strongylocentrotus purpuratus clone R3-3087G08, W... 40 6.5 8
(FK019303) GLND910TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 42 6.6 2
(BM177444) saj81d07.y1 Gm-c1074 Glycine max cDNA clone SOYBE... 42 6.6 2
(CD400493) Gm_ck22354 Soybean induced by Salicylic Acid Glyc... 42 6.6 2
(CU929057) Zebrafish DNA sequence from clone CH73-242F23 in ... 46 6.6 1
(CU633204) Zebrafish DNA sequence from clone CH73-80E16 in l... 46 6.6 1
(CU424461) Zebrafish DNA sequence from clone CH73-209L12 in ... 46 6.6 1
(CT997810) Zebrafish DNA sequence from clone CH211-174H24 in... 46 6.6 1
(CR854821) Zebrafish DNA sequence from clone DKEY-35H2 in li... 46 6.6 1
(BX324004) Zebrafish DNA sequence from clone CH211-284O17 in... 46 6.6 1
(BX324002) Zebrafish DNA sequence from clone CH211-129H21 in... 46 6.6 1
(BX323076) Zebrafish DNA sequence from clone DKEY-106A24 in ... 46 6.6 1
(BX000463) Zebrafish DNA sequence from clone CH211-266I2. 46 6.6 1
(AC158402) Mus musculus chromosome 1, clone RP24-328M23, com... 46 6.6 1
(AC183593) Pan troglodytes BAC clone CH251-685P8 from chromo... 46 6.6 1
(AC145897) Pan troglodytes BAC clone RP43-8K4 from chromosom... 46 6.6 1
(DQ287976) Setaria faberi transposon Mu-like element, comple... 46 6.6 1
(AC202301) Medicago truncatula clone mth2-166m2, complete se... 46 6.6 1
(AC174377) Medicago truncatula chromosome 6 clone mth2-57g20... 46 6.6 1
(AC153123) Medicago truncatula clone mte1-72m7, complete seq... 46 6.6 1
(AC147501) Medicago truncatula chromosome 8 clone mth2-12n2,... 46 6.6 1
(AC146590) Medicago truncatula chromosome 8 clone mth2-145p1... 46 6.6 1
(AC146569) Medicago truncatula chromosome 6 clone mth2-102a8... 46 6.6 1
(EA394729) Sequence 43553 from patent US 7314974. 46 6.6 1
(AC159458) Trypanosoma brucei chromosome 7 clone RPCI93-8P12... 46 6.6 1
(AC159437) Trypanosoma brucei chromosome 7 clone RPCI93-29K4... 46 6.6 1
(AL078587) Human DNA sequence from clone RP4-760C5 on chromo... 46 6.6 1
(AC116017) Homo sapiens chromosome 18, clone RP11-57J16, com... 46 6.6 1
(AC013751) Homo sapiens chromosome , clone RP11-298P6, compl... 46 6.6 1
(AC009872) Homo sapiens chromosome 8, clone RP11-108P12, com... 46 6.6 1
(AC158284) Dromaius novaehollandiae clone VMRC16-150I9, WORK... 46 6.6 1
(AC123101) Rattus norvegicus clone CH230-32O20, *** SEQUENCI... 46 6.6 1
(CU582944) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.6 1
(CU571291) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 6.6 1
(CU041394) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 6.6 1
(CT990562) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 6.6 1
(AC199470) Medicago truncatula clone mth2-51h14, WORKING DRA... 46 6.6 1
(AC193495) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB... 46 6.6 1
(AC174685) Bos taurus clone CH240-411J13, WORKING DRAFT SEQU... 46 6.6 1
(AZ212629) Sheared DNA-65H8.TR Sheared DNA Trypanosoma bruce... 46 6.6 1
(ET792559) CHO_OF654xn16r1.ab1 CHO_OF Nicotiana tabacum geno... 46 6.6 1
(EJ973483) 1093022098921 Global-Ocean-Sampling_GS-30-02-01-1... 46 6.6 1
(EJ924916) 1093018777293 Global-Ocean-Sampling_GS-30-02-01-1... 46 6.6 1
(EJ812407) 1093017497675 Global-Ocean-Sampling_GS-30-02-01-1... 46 6.6 1
(EJ794197) 1093017392171 Global-Ocean-Sampling_GS-30-02-01-1... 46 6.6 1
(EJ428321) 1093015239421 Global-Ocean-Sampling_GS-28-01-01-1... 46 6.6 1
(EJ036996) 1095454076021 Global-Ocean-Sampling_GS-26-01-01-1... 46 6.6 1
(BZ551838) pacs1-60_3350.x1 pacs1-60 Pseudomonas aeruginosa ... 46 6.6 1
(EC361242) IMMUNEF088883N14 POSSUM_01-C-POSSUM-IMMUNE-2KB Tr... 46 6.6 1
(AU097628) Oryza sativa Japonica Group cDNA, partial sequenc... 46 6.6 1
(CN554724) tae32d07.x1 Hydra EST Darmstadt I Hydra magnipapi... 46 6.6 1
(CJ457196) Macaca fascicularis mRNA, clone: QflA-23067, 5' e... 46 6.6 1
(CF922183) gmrhRww24-08-T7_B09_1_077 Soybean root hair subtr... 46 6.6 1
(CF922107) gmrhRww24-07-T7_B09_1_077 Soybean root hair subtr... 46 6.6 1
(CP001037) Nostoc punctiforme PCC 73102, complete genome. 46 6.6 1
(BI969111) GM830007A20F07 Gm-r1083 Glycine max cDNA clone Gm... 42 6.6 2
(CR854986) Zebrafish DNA sequence from clone DKEY-287B3 in l... 36 6.7 10
(BG650296) sad04g07.y1 Gm-c1073 Glycine max cDNA clone GENOM... 42 6.7 2
(AW396764) sf37e06.x1 Gm-c1028 Glycine max cDNA clone GENOME... 42 6.7 2
(AX142595) Sequence 1317 from Patent WO0134809. 44 6.7 2
(AR484240) Sequence 1317 from patent US 6703492. 44 6.7 2
(BI702165) sag42h07.y1 Gm-c1081 Glycine max cDNA clone GENOM... 42 6.7 2
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 32 6.7 19
(BI943719) sa30c07.y1 Gm-c1004 Glycine max cDNA clone GENOME... 42 6.7 2
(EA073455) Sequence 813 from patent US 7183083. 44 6.8 2
(AR887152) Sequence 813 from patent US 7060458. 44 6.8 2
(BI424152) sah66d08.y1 Gm-c1049 Glycine max cDNA clone GENOM... 42 6.8 2
(CD405526) Gm_ck29180 Soybean induced by Salicylic Acid Glyc... 42 6.9 2
(CD410160) Gm_ck37673 Soybean induced by Salicylic Acid Glyc... 42 6.9 2
(DB980377) Glycine max cDNA, clone: GMFL02-21-A24, 3'end. 42 6.9 2
(CD395438) Gm_ck15456 Soybean induced by Salicylic Acid Glyc... 42 7.0 2
(BM526821) sal46b09.y1 Gm-c1059 Glycine soja cDNA clone SOYB... 42 7.0 2
(CD409418) Gm_ck36489 Soybean induced by Salicylic Acid Glyc... 42 7.0 2
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 38 7.0 12
(CD413423) Gm_ck44958 Soybean induced by Salicylic Acid Glyc... 42 7.1 2
(CD394163) Gm_ck13833 Soybean induced by Salicylic Acid Glyc... 42 7.1 2
(CD397125) Gm_ck17817 Soybean induced by Salicylic Acid Glyc... 42 7.2 2
(AL354736) Human DNA sequence from clone RP11-205B18 on chro... 36 7.2 10
(CD415460) Gm_ck5608 Soybean induced by Salicylic Acid Glyci... 42 7.2 2
(AY160101) Dictyostelium discoideum strain AX4 nucleotide ex... 34 7.2 5
(BG508136) sac98f11.y1 Gm-c1073 Glycine max cDNA clone GENOM... 42 7.4 2
(CD394593) Gm_ck14307 Soybean induced by Salicylic Acid Glyc... 42 7.4 2
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255... 30 7.5 8
(AF402141) Schizophyllum commune mitochondrial DNA, complete... 34 7.7 9
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 34 7.7 17
(CR847534) Zebrafish DNA sequence from clone DKEY-27E20 in l... 32 7.7 15
(EF206804) Glycine max clone GM_WBb0040F22, *** SEQUENCING I... 34 7.8 10
(X63648) P.falciparum PfPK2 mRNA. 34 7.9 5
(AW760521) sl51d06.y1 Gm-c1027 Glycine max cDNA clone GENOME... 42 7.9 2
(BX255967) Zebrafish DNA sequence from clone CH211-191G22 in... 36 8.1 9
(CU694258) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.1 8
(AC093791) Homo sapiens BAC clone RP11-261K4 from 4, complet... 44 8.2 8
(BX005129) Zebrafish DNA sequence from clone CH211-241D24 in... 44 8.4 8
(AC150800) Medicago truncatula chromosome 7 clone mth2-77m9,... 32 8.5 11
(CP000382) Clostridium novyi NT, complete genome. 44 8.5 20
(CT583706) Zebrafish DNA sequence from clone DKEY-178J17 in ... 40 8.5 7
(V00683) Yeast mitochondrial gene for ATPase (genes oli-2 an... 32 8.6 4
(BJ396560) Dictyostelium discoideum cDNA clone:dds43i05, 5' ... 34 8.6 3
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 8.6 17
(AC092706) Homo sapiens chromosome 18, clone RP11-658P14, co... 34 8.7 9
(CR381540) Zebrafish DNA sequence from clone CH211-153B23 in... 44 8.7 6
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81... 36 8.7 11
(AC202311) Medicago truncatula clone mth2-12d13, WORKING DRA... 34 8.9 9
(BJ388738) Dictyostelium discoideum cDNA clone:dds16e06, 5' ... 34 8.9 3
(FL576630) cembMI0262 cDNA library from leaves of Gossypium ... 40 9.0 2
(BJ388771) Dictyostelium discoideum cDNA clone:dds16m05, 5' ... 32 9.0 3
(CF921875) gmrhRww24-04-T7_E01_1_007 Soybean root hair subtr... 42 9.0 2
(AC176879) Strongylocentrotus purpuratus clone R3-1110D11, W... 38 9.0 8
(Z48241) Caenorhabditis elegans Cosmid C32A3. 42 9.0 5
(BJ336862) Dictyostelium discoideum cDNA clone:dda55m07, 5' ... 38 9.1 2
(BJ389202) Dictyostelium discoideum cDNA clone:dds17l22, 5' ... 38 9.1 2

>(BJ342764) Dictyostelium discoideum cDNA clone:dda1b13, 3' end,
single read.
Length = 666

Score = 1219 bits (615), Expect(2) = 0.0
Identities = 615/615 (100%)
Strand = Plus / Minus


Query: 1870 catcgagtacaagatcaaaacacatttgtatataagagacagactggtataccattaaag 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 catcgagtacaagatcaaaacacatttgtatataagagacagactggtataccattaaag 607


Query: 1930 gatcaaaaaacattggaagatttagaagaaatgttcaatcaagttaaagcacatactatt 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gatcaaaaaacattggaagatttagaagaaatgttcaatcaagttaaagcacatactatt 547


Query: 1990 gatattaaccaagttccaatgtattcgattgtacctgctattaaaaataatgaatatgag 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gatattaaccaagttccaatgtattcgattgtacctgctattaaaaataatgaatatgag 487


Query: 2050 caatggaaatatgcattaaataacaaggatatcattttcattgataatctattgattgta 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 caatggaaatatgcattaaataacaaggatatcattttcattgataatctattgattgta 427


Query: 2110 actggaagtttcaatccaacctatgacagtcttgaatgtgagaatcgtacattaatattc 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 actggaagtttcaatccaacctatgacagtcttgaatgtgagaatcgtacattaatattc 367


Query: 2170 acatttgatttaccagatattccagaatctcatttctctcattcaatctactatgatcca 2229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acatttgatttaccagatattccagaatctcatttctctcattcaatctactatgatcca 307


Query: 2230 agtgacaaagttagatacttaaaagtctcgggtaatagaaaattaagttatagagcatta 2289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agtgacaaagttagatacttaaaagtctcgggtaatagaaaattaagttatagagcatta 247


Query: 2290 actggtacacgtggtggtgagagtacaattaatgaatatccatcagctggtgttaaaatt 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 actggtacacgtggtggtgagagtacaattaatgaatatccatcagctggtgttaaaatt 187


Query: 2350 ggtaatagtttaaatcttagaaaagatggagaatttgatctgagaattccaattgaagca 2409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggtaatagtttaaatcttagaaaagatggagaatttgatctgagaattccaattgaagca 127


Query: 2410 aattatagtaaaaattattcaaatcattttgaaaatggtgttttaacattaacatttaaa 2469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aattatagtaaaaattattcaaatcattttgaaaatggtgttttaacattaacatttaaa 67


Query: 2470 gaagaaattgaaggt 2484
|||||||||||||||
Sbjct: 66 gaagaaattgaaggt 52

Score = 30.2 bits (15), Expect(2) = 0.0
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 2488 ccagatgaaagttgc 2502
|||||||||||||||
Sbjct: 47 ccagatgaaagttgc 33

Score = 97.6 bits (49), Expect(2) = 5e-21
Identities = 49/49 (100%)
Strand = Plus / Minus


Query: 1385 aaacacatttgtatataagagacagactggtataccattaaaggatcaa 1433
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aaacacatttgtatataagagacagactggtataccattaaaggatcaa 601

Score = 38.2 bits (19), Expect(2) = 5e-21
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 1369 catcgagtacaagatcaaa 1387
|||||||||||||||||||
Sbjct: 666 catcgagtacaagatcaaa 648

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 3,133,991,511
Number of extensions: 211089129
Number of successful extensions: 20349997
Number of sequences better than 10.0: 534
Length of query: 2595
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2570
Effective length of database: 96,311,147,814
Effective search space: 247519649881980
Effective search space used: 247519649881980
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.16
Homology vs Protein
Query= Contig-U15345-1 (Contig-U15345-1Q) /CSM_Contig/Contig-U15345-1Q.Seq.d
(2595 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

U82514_1(U82514|pid:none) Dictyostelium discoideum random slug c... 334 8e-90
(Q54QE8) RecName: Full=Heat shock protein DDB_G0283913; 215 6e-54
AC116979_66(AC116979|pid:none) Dictyostelium discoideum chromoso... 51 2e-04
AC116979_67(AC116979|pid:none) Dictyostelium discoideum chromoso... 44 0.039
AL844504_221(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.33
AL929353_66(AL929353|pid:none) Plasmodium falciparum strain 3D7,... 40 0.33
CP001185_1710(CP001185|pid:none) Thermosipho africanus TCF52B, c... 40 0.33
AE014188_356(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.33
FN357695_2(FN357695|pid:none) Schistosoma mansoni genome sequenc... 40 0.43
AL844505_89(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.43
BA000026_949(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 40 0.56
CP001014_1329(CP001014|pid:none) Thermoproteus neutrophilus V24S... 39 0.73
AE001362_113(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.96
AL844508_104(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 39 1.2
AY138501_1(AY138501|pid:none) Plasmodium falciparum normocyte bi... 38 2.1
CP001034_1189(CP001034|pid:none) Natranaerobius thermophilus JW/... 38 2.1
AE014186_35(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 37 2.8
AY138503_1(AY138503|pid:none) Plasmodium falciparum normocyte bi... 37 2.8
CP001146_289(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 37 2.8
AY138502_1(AY138502|pid:none) Plasmodium falciparum normocyte bi... 37 2.8
CR380950_166(CR380950|pid:none) Candida glabrata strain CBS138 c... 37 2.8
AE014187_685(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 37 2.8
AY138499_1(AY138499|pid:none) Plasmodium falciparum normocyte bi... 37 2.8
AL844506_48(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 37 3.6
AY166677_1(AY166677|pid:none) Plasmodium reichenowi reticulocyte... 37 3.6
BX548174_61(BX548174|pid:none) Prochlorococcus marinus MED4 comp... 37 4.7
BA000021_40(BA000021|pid:none) Wigglesworthia glossinidia endosy... 37 4.7
(Q5R4B2) RecName: Full=Armadillo repeat-containing X-linked prot... 37 4.7
(Q9P291) RecName: Full=Armadillo repeat-containing X-linked prot... 37 4.7
AY543072_2(AY543072|pid:none) Klebsiella pneumoniae plasmid pIGM... 37 4.7
AE014188_122(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 37 4.7
AE014186_459(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 36 6.2
CR382399_67(CR382399|pid:none) Plasmodium falciparum chromosome ... 36 6.2
EF710649_12(EF710649|pid:none) Glyptapanteles flavicoxis clone B... 36 6.2
AF312917_1(AF312917|pid:none) Plasmodium falciparum reticulocyte... 36 6.2
(Q8IDX6) RecName: Full=Reticulocyte-binding protein 2 homolog a;... 36 6.2
AE014188_223(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 36 6.2
AL844505_152(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 36 6.2
AF312916_1(AF312916|pid:none) Plasmodium falciparum reticulocyte... 36 6.2
DQ927303_31(DQ927303|pid:none) Tetrahymena malaccensis strain MP... 36 6.2
EU427341_8(EU427341|pid:none) Orius niger mitochondrion, complet... 36 6.2
CP000673_3536(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 36 8.1
AP009049_3188(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 36 8.1
AE014185_108(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 36 8.1
AL844507_240(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 36 8.1
CP000123_7(CP000123|pid:none) Mycoplasma capricolum subsp. capri... 36 8.1

>U82514_1(U82514|pid:none) Dictyostelium discoideum random slug cDNA6
protein (rsc6) mRNA, partial cds.
Length = 169

Score = 334 bits (857), Expect = 8e-90
Identities = 162/163 (99%), Positives = 162/163 (99%)
Frame = +1

Query: 2014 SIVPAIKNNEYEQWKYALNNKDIIFIDNLLIVTGSFNPTYDSLECENRTLIFTFDLPDIP 2193
SIVPAIKNNEYEQWKYALNNKDIIFIDNLLIVTGSFNPTYDSLECENRTLIFTFDLPDIP
Sbjct: 6 SIVPAIKNNEYEQWKYALNNKDIIFIDNLLIVTGSFNPTYDSLECENRTLIFTFDLPDIP 65

Query: 2194 ESHFSHSIYYDPSDKVRYLKVSGNRKLSYRALTGTRGGESTINEYPSAGVKIGNSLNLRK 2373
ESHFSHSIYYDPSDKVRYLKVSGNRKLSYRALTGTRGGEST NEYPSAGVKIGNSLNLRK
Sbjct: 66 ESHFSHSIYYDPSDKVRYLKVSGNRKLSYRALTGTRGGESTTNEYPSAGVKIGNSLNLRK 125

Query: 2374 DGEFDLRIPIEANYSKNYSNHFENGVLTLTFKEEIEGLPDESC 2502
DGEFDLRIPIEANYSKNYSNHFENGVLTLTFKEEIEGLPDESC
Sbjct: 126 DGEFDLRIPIEANYSKNYSNHFENGVLTLTFKEEIEGLPDESC 168

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,295,969,779
Number of extensions: 61471007
Number of successful extensions: 182259
Number of sequences better than 10.0: 46
Number of HSP's gapped: 182145
Number of HSP's successfully gapped: 49
Length of query: 865
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 727
Effective length of database: 604,535,722
Effective search space: 439497469894
Effective search space used: 439497469894
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.96 gvh: 0.44 alm: 0.22 top: 0.67 tms: 0.07 mit: 0.28 mip: 0.05
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.03 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

48.0 %: nuclear
28.0 %: cytoplasmic
8.0 %: Golgi
8.0 %: mitochondrial
4.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U15345-1 is nuc

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 6
AF (FL, S) 5
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 2
SF (FL, S) 0
CH (FL, L) 4
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0