Contig-U15315-1
Contig ID Contig-U15315-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15315-1 (Contig-U15315-1Q) /CSM_Contig/Contig-U15315-1Q.Seq.d
TCATTATTAAAATTTTAGAAAAGCACAAAAATGTTAAATAAACTAATACT
ATTATTAATTCTATCAAGTTGTTTGGTACTATCAGTTAAAAGTGAAGTTA
ATGTTGATTGCTCCCTCGTTAGATGTGCCCAACCAATATGTAAACCTCAT
TATAGATTAAACATGACCGATTCTTGTTGTGGTCGTTGTGAACCTTGTAC
CGATGTTGCATGTACTCTTCAAGTCAAATATTGTCAAGATGGTGAAGTTC
CAACCGGTTGTTGTCCATGTACTCTCCCACCAACCAAACCAGATTGCTCC
CTTGTTAAATGTGCTAGACCAGTATGTAAACCATATTATAGATTAAACAT
GACCGATTCTTGTTGTGGTCGTTGTGAACCATGTACAGGTGTCGCATGTA
CTCTTCAAATCAAATATTGTAAAGATGGTGAAGTTCCAACTGGTTGTTGT
CCATGTACACCTCAACCAACTAAAAAACCAGATTGTTCAAAAGTTCCATG
TCCAAAGATTTTAAAATATTGCCAAGAAGGTGAACTTCCAACTGGTTGTT
GTCCATGTACACCTCAACCAACTAAAAAACCAGATTGTTCAAGAGTTCCA
TGTCCAAAGATTTTGAAATACTGTAAAGAAGGTGAACTTCCAACTGGTTG
TTGTCCATGTACACCTCAACCAACTAAAAAACCAGATTGTTCTGATGTAA
TGTGTACAATGGACATTAGATATTGTAAAAATGGTGAACTTCCAACTGGT
TGTTGTCCTTGCACACCTCAAGAAACCAAAGTTCCAGATTGTTCTAAAGC
TATGTGCACAATGGATATTAAATATTGTAAACCAGGTGAAAAACCCTTTG
GTTGTTGCCCATGTCGTGAAAATTTAACTCAATAAAAAATTAATAAAATA
TATATATTTGTTTTTTTAATTAATTTAAAAAAAAAAAAAAACAAAA

Gap no gap
Contig length 946
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 5561203
End point 5560258
Strand (PLUS/MINUS) MINUS
Number of clones 9
Number of EST 10
Link to clone list U15315
List of clone(s)

est1=SFK717F,1,694
est2=AHE311E,3,918
est3=AFI796F,6,771
est4=SLK756F,6,305
est5=FC-AB20F,41,718
est6=CFB787Z,106,882
est7=SLE532E,236,923
est8=SSF516Z,293,946
est9=SSJ589E,488,939
est10=SLK756Z,751,938
Translated Amino Acid sequence
sllkf*KSTKMLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCC
GRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDS
CCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELP
TGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIR
YCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ*kinki
yifvflinlkkkknk


Translated Amino Acid sequence (All Frames)
Frame A:
sllkf*KSTKMLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCC
GRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDS
CCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELP
TGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIR
YCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ*kinki
yifvflinlkkkknk


Frame B:
hy*nfrkaqkc*in*yyy*fyqvvwyyqlkvklmliapsldvpnqyvnliid*t*pilvv
vvvnlvpmlhvlfksnivkmvkfqpvvvhvlshqpnqiapllnvldqyvnhiid*t*pil
vvvvvnhvqvshvlfksnivkmvkfqlvvvhvhlnqlknqivqkfhvqrf*niakkvnfq
lvvvhvhlnqlknqivqefhvqrf*ntvkkvnfqlvvvhvhlnqlknqivlm*cvqwtld
ivkmvnfqlvvvlahlkkpkfqivlklcaqwilnivnqvknplvvahvvki*lnkkliky
iylff*li*kkkktk


Frame C:
iikilekhknvk*tntiinsiklfgtis*k*s*c*llpr*mcptnm*tsl*ikhdrfllw
sl*tlyrccmysssqilsrw*ssnrllsmysptnqtrllpc*mc*tsm*til*ikhdrfl
lwsl*tmyrcrmyssnqil*rw*ssnwllsmytstn*ktrlfkssmskdfkilprr*tsn
wllsmytstn*ktrlfkssmskdfeil*rr*tsnwllsmytstn*ktrlf*cnvyngh*i
l*kw*tsnwllslhtsrnqssrlf*syvhngy*il*tr*ktlwllpms*kfnsikn**ni
yicffn*fkkkkkq


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15315-1 (Contig-U15315-1Q)
/CSM_Contig/Contig-U15315-1Q.Seq.d
(946 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15315-1 (Contig-U15315-1Q) /CSM_Contig/Conti... 1804 0.0
Contig-U15718-1 (Contig-U15718-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U13238-1 (Contig-U13238-1Q) /CSM_Contig/Conti... 40 0.006
Contig-U16169-1 (Contig-U16169-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U13538-1 (Contig-U13538-1Q) /CSM_Contig/Conti... 38 0.024
Contig-U12660-1 (Contig-U12660-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U10279-1 (Contig-U10279-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U04479-1 (Contig-U04479-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U02377-1 (Contig-U02377-1Q) /CSM_Contig/Conti... 36 0.095
Contig-U13029-1 (Contig-U13029-1Q) /CSM_Contig/Conti... 30 5.9

>Contig-U15315-1 (Contig-U15315-1Q) /CSM_Contig/Contig-U15315-1Q.Seq.d
Length = 946

Score = 1804 bits (910), Expect = 0.0
Identities = 910/910 (100%)
Strand = Plus / Plus


Query: 1 tcattattaaaattttagaaaagcacaaaaatgttaaataaactaatactattattaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcattattaaaattttagaaaagcacaaaaatgttaaataaactaatactattattaatt 60


Query: 61 ctatcaagttgtttggtactatcagttaaaagtgaagttaatgttgattgctccctcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatcaagttgtttggtactatcagttaaaagtgaagttaatgttgattgctccctcgtt 120


Query: 121 agatgtgcccaaccaatatgtaaacctcattatagattaaacatgaccgattcttgttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatgtgcccaaccaatatgtaaacctcattatagattaaacatgaccgattcttgttgt 180


Query: 181 ggtcgttgtgaaccttgtaccgatgttgcatgtactcttcaagtcaaatattgtcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtcgttgtgaaccttgtaccgatgttgcatgtactcttcaagtcaaatattgtcaagat 240


Query: 241 ggtgaagttccaaccggttgttgtccatgtactctcccaccaaccaaaccagattgctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtgaagttccaaccggttgttgtccatgtactctcccaccaaccaaaccagattgctcc 300


Query: 301 cttgttaaatgtgctagaccagtatgtaaaccatattatagattaaacatgaccgattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttgttaaatgtgctagaccagtatgtaaaccatattatagattaaacatgaccgattct 360


Query: 361 tgttgtggtcgttgtgaaccatgtacaggtgtcgcatgtactcttcaaatcaaatattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgttgtggtcgttgtgaaccatgtacaggtgtcgcatgtactcttcaaatcaaatattgt 420


Query: 421 aaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaactaaaaaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaactaaaaaacca 480


Query: 481 gattgttcaaaagttccatgtccaaagattttaaaatattgccaagaaggtgaacttcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattgttcaaaagttccatgtccaaagattttaaaatattgccaagaaggtgaacttcca 540


Query: 541 actggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttcaagagttcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttcaagagttcca 600


Query: 601 tgtccaaagattttgaaatactgtaaagaaggtgaacttccaactggttgttgtccatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtccaaagattttgaaatactgtaaagaaggtgaacttccaactggttgttgtccatgt 660


Query: 661 acacctcaaccaactaaaaaaccagattgttctgatgtaatgtgtacaatggacattaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acacctcaaccaactaaaaaaccagattgttctgatgtaatgtgtacaatggacattaga 720


Query: 721 tattgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaagaaaccaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tattgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaagaaaccaaa 780


Query: 781 gttccagattgttctaaagctatgtgcacaatggatattaaatattgtaaaccaggtgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gttccagattgttctaaagctatgtgcacaatggatattaaatattgtaaaccaggtgaa 840


Query: 841 aaaccctttggttgttgcccatgtcgtgaaaatttaactcaataaaaaattaataaaata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaaccctttggttgttgcccatgtcgtgaaaatttaactcaataaaaaattaataaaata 900


Query: 901 tatatatttg 910
||||||||||
Sbjct: 901 tatatatttg 910


>Contig-U15718-1 (Contig-U15718-1Q) /CSM_Contig/Contig-U15718-1Q.Seq.d
Length = 3745

Score = 40.1 bits (20), Expect = 0.006
Identities = 23/24 (95%)
Strand = Plus / Minus


Query: 884 aaaaaattaataaaatatatatat 907
|||| |||||||||||||||||||
Sbjct: 801 aaaatattaataaaatatatatat 778


>Contig-U13238-1 (Contig-U13238-1Q) /CSM_Contig/Contig-U13238-1Q.Seq.d
Length = 542

Score = 40.1 bits (20), Expect = 0.006
Identities = 23/24 (95%)
Strand = Plus / Minus


Query: 884 aaaaaattaataaaatatatatat 907
|||| |||||||||||||||||||
Sbjct: 45 aaaatattaataaaatatatatat 22


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,055
Number of Sequences: 8402
Number of extensions: 19055
Number of successful extensions: 2377
Number of sequences better than 10.0: 275
length of query: 946
length of database: 8,075,542
effective HSP length: 16
effective length of query: 930
effective length of database: 7,941,110
effective search space: 7385232300
effective search space used: 7385232300
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.19
Homology vs DNA
Query= Contig-U15315-1 (Contig-U15315-1Q) /CSM_Contig/Contig-U15315-1Q.Seq.d
(946 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116960) Dictyostelium discoideum chromosome 2 map complem... 1721 0.0 1
(BJ332424) Dictyostelium discoideum cDNA clone:dda39f03, 5' ... 1524 0.0 1
(BJ350196) Dictyostelium discoideum cDNA clone:dda39f03, 3' ... 1513 0.0 1
(BJ373775) Dictyostelium discoideum cDNA clone:ddc4n21, 3' e... 1370 0.0 3
(AU284234) Dictyostelium discoideum gamete cDNA clone:FC-AB2... 1324 0.0 1
(BJ327055) Dictyostelium discoideum cDNA clone:dda18p23, 5' ... 1265 0.0 2
(AU061519) Dictyostelium discoideum slug cDNA, clone SLE532. 1255 0.0 1
(AU034811) Dictyostelium discoideum slug cDNA, clone SLE532. 1195 0.0 1
(C92862) Dictyostelium discoideum slug cDNA, clone SSF516. 1142 0.0 1
(BJ390321) Dictyostelium discoideum cDNA clone:dds22b05, 5' ... 1043 0.0 4
(M11012) Slime mold (D.discoideum) prestalk D11 gene, comple... 886 0.0 9
(C91115) Dictyostelium discoideum slug cDNA, clone SSJ589. 755 0.0 1
(AU060648) Dictyostelium discoideum slug cDNA, clone SLK756. 569 e-158 1
(AU054124) Dictyostelium discoideum slug cDNA, clone SLK756. 226 1e-54 1
(AF482962) Dictyostelium discoideum ABC transporter AbcH.3 (... 127 8e-25 1
(CT837409) Oryza sativa (indica cultivar-group) cDNA clone:O... 32 1e-04 5
(CT848887) Oryza sativa Indica Group EST sequence:CONTIG5708. 32 0.060 4
(EJ594374) 1092961069260 Global-Ocean-Sampling_GS-29-01-01-1... 32 0.079 3
(EJ547553) 1092959286067 Global-Ocean-Sampling_GS-29-01-01-1... 32 0.095 3
(BV552105) S221P61405FA11.T0 Yvonne Pan troglodytes troglody... 50 0.16 1
(BV525787) G591P609247RF6.T0 Clint Pan troglodytes verus STS... 50 0.16 1
(BV525128) G591P605184FH2.T0 Clint Pan troglodytes verus STS... 50 0.16 1
(BV514085) rgn46g06.b1 Clint Pan troglodytes verus STS genom... 50 0.16 1
(BS000059) Pan troglodytes chromosome 22 clone:RP43-022N17, ... 50 0.16 1
(AM460700) Vitis vinifera contig VV78X028340.15, whole genom... 50 0.16 1
(AP001678) Homo sapiens genomic DNA, chromosome 21q, section... 50 0.16 1
(AP001256) Homo sapiens genomic DNA, chromosome 21q21.1-q21.... 50 0.16 1
(DY765203) 24H_new11_A13 Bicyclus anynana wings - 24H pupae ... 26 0.29 5
(BP505699) Hydra magnipapillata cDNA, clone:hm_03541. 30 0.30 4
(DY768171) 48H_new18_D09 Bicyclus anynana wings - 48H pupae ... 26 0.47 5
(DY766484) 24H_new14_J21 Bicyclus anynana wings - 24H pupae ... 26 0.60 5
(BV369138) S231P6191FD11.T0 BedlingtonTerrier Canis familiar... 48 0.63 1
(DT659998) EST00033 WBPH Lamda Zap Express cDNA Library Soga... 48 0.63 1
(DT659982) EST00017 WBPH Lamda Zap Express cDNA Library Soga... 48 0.63 1
(AC129092) Medicago truncatula clone mth2-17n16, complete se... 38 0.68 3
(CJ388197) Molgula tectiformis cDNA, gonad clone:mtgd003l05,... 30 0.93 3
(AU282291) Molgula tectiformis mRNA, clone:MT21B1C07R, 5' end. 30 0.98 3
(CJ346184) Molgula tectiformis cDNA, cleaving embryo clone:m... 30 1.2 3
(CJ327314) Molgula tectiformis cDNA, embryo just before hatc... 30 1.7 3
(CJ394017) Molgula tectiformis cDNA, gonad clone:mtgd021d04,... 30 2.0 3
(BG785088) SEAUMC005045 Sea urchin primary mesenchyme cell c... 28 2.2 4
(BG784337) SEAUMC004294 Sea urchin primary mesenchyme cell c... 28 2.3 4
(BG785074) SEAUMC005031 Sea urchin primary mesenchyme cell c... 28 2.3 4
(CJ350552) Molgula tectiformis cDNA, cleaving embryo clone:m... 30 2.3 3
(CJ350986) Molgula tectiformis cDNA, cleaving embryo clone:m... 30 2.4 3
(CR940352) Theileria annulata genomic DNA chromosome 3. 46 2.5 1
(AC185079) Bos taurus clone CH240-188I14, WORKING DRAFT SEQU... 46 2.5 1
(EY445092) CBAY7527.fwd CBAY Tubifex tubifex Embryos and juv... 46 2.5 1
(EY445091) CBAY7527.rev CBAY Tubifex tubifex Embryos and juv... 46 2.5 1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 46 2.5 1
(CP000728) Clostridium botulinum F str. Langeland, complete ... 46 2.5 1
(CP000727) Clostridium botulinum A str. Hall, complete genome. 46 2.5 1
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 46 2.5 1
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 46 2.5 1
(DN586005) 94366064 Sea Urchin primary mesenchyme cell cDNA ... 28 2.6 4
(CJ369785) Molgula tectiformis cDNA, gastrula/neurula clone:... 30 2.6 3
(DN582386) 90116039 Sea Urchin primary mesenchyme cell cDNA ... 28 2.6 4
(DN787355) 93869551 Sea Urchin primary mesenchyme cell cDNA ... 28 2.9 4
(DN787136) 92819070 Sea Urchin primary mesenchyme cell cDNA ... 28 3.1 4
(CJ376103) Molgula tectiformis cDNA, gastrula/neurula clone:... 30 3.5 3
(DN785058) 92350793 Sea Urchin primary mesenchyme cell cDNA ... 28 4.2 4
(DN789557) 90870661 Sea Urchin primary mesenchyme cell cDNA ... 28 4.5 4
(AF466306) Dictyostelium discoideum ABC transporter AbcB3 (a... 36 5.1 2
(BV232159) S233P6341FC3.T0 LabradorRetriever Canis familiari... 36 5.5 2
(CJ334815) Molgula tectiformis cDNA, embryo just before hatc... 34 5.8 2
(EY386741) CAXA6385.fwd CAXA Helobdella robusta Subtracted L... 34 7.6 2
(EY371051) CAXA13236.fwd CAXA Helobdella robusta Subtracted ... 34 7.8 2
(EJ211112) 1092346534799 Global-Ocean-Sampling_GS-27-01-01-1... 36 8.2 2
(AL009385) H.sapiens flow-sorted chromosome 1 HindIII fragme... 44 9.8 1
(AL929149) Mouse DNA sequence from clone RP23-93B24 on chrom... 44 9.8 1
(AL591209) Mouse DNA sequence from clone RP23-309H19 on chro... 44 9.8 1
(AC130715) Mus musculus BAC clone RP23-460L16 from chromosom... 44 9.8 1
(AC151368) Aotus nancymaae clone CH258-251O19, complete sequ... 44 9.8 1
(AC148057) Callicebus moloch clone LB5-121J11, complete sequ... 44 9.8 1
(AC146883) Callithrix jacchus clone CH259-225J7, complete se... 44 9.8 1
(AM460989) Vitis vinifera contig VV78X153647.4, whole genome... 44 9.8 1
(AB022220) Arabidopsis thaliana genomic DNA, chromosome 3, P... 44 9.8 1
(U56965) Caenorhabditis elegans cosmid C15H9, complete seque... 44 9.8 1
(EU569764) Phthonandria atrilineata mitochondrion, complete ... 44 9.8 1
(AL353779) Human DNA sequence from clone RP1-43O17 on chromo... 44 9.8 1
(AL109956) Human DNA sequence from clone GS1-98H19 on chromo... 44 9.8 1
(AC123745) Mus musculus clone RP24-120J16, WORKING DRAFT SEQ... 44 9.8 1
(AC108195) Felis catus clone RP86-571C15, WORKING DRAFT SEQU... 44 9.8 1
(AC027690) Homo sapiens chromosome 1 clone RP11-287D19, WORK... 44 9.8 1
(AC217327) Oryza punctata clone OP__Ba0001E16, *** SEQUENCIN... 44 9.8 1
(AC184581) Strongylocentrotus purpuratus clone R3-3093P10, W... 44 9.8 1
(AC180976) Strongylocentrotus purpuratus clone R3-3026M14, W... 44 9.8 1
(AC179558) Strongylocentrotus purpuratus clone R3-1032D14, W... 44 9.8 1
(AC177651) Strongylocentrotus purpuratus clone R3-1020D12, W... 44 9.8 1
(AK041977) Mus musculus 3 days neonate thymus cDNA, RIKEN fu... 44 9.8 1
(FH957563) CHO_OF6766xl12f1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 9.8 1
(FH254098) CHO_OF3220xf23r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 9.8 1
(FH088717) CHO_OF3877xp10r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 9.8 1
(ET786584) CHO_OF637xo11f1.ab1 CHO_OF Nicotiana tabacum geno... 44 9.8 1
(CW847611) GT14772.Ds3.10.08.2004.jx92.658 Arabidopsis thali... 44 9.8 1
(CL470743) SAIL_147_E01.v1 SAIL Collection Arabidopsis thali... 44 9.8 1
(AG338730) Mus musculus molossinus DNA, clone:MSMg01-131C11.... 44 9.8 1

>(AC116960) Dictyostelium discoideum chromosome 2 map
complement(1004496-821614) strain AX4, complete sequence.
Length = 182870

Score = 1721 bits (868), Expect = 0.0
Identities = 868/868 (100%)
Strand = Plus / Minus


Query: 1 tcattattaaaattttagaaaagcacaaaaatgttaaataaactaatactattattaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85082 tcattattaaaattttagaaaagcacaaaaatgttaaataaactaatactattattaatt 85023


Query: 61 ctatcaagttgtttggtactatcagttaaaagtgaagttaatgttgattgctccctcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85022 ctatcaagttgtttggtactatcagttaaaagtgaagttaatgttgattgctccctcgtt 84963


Query: 121 agatgtgcccaaccaatatgtaaacctcattatagattaaacatgaccgattcttgttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84962 agatgtgcccaaccaatatgtaaacctcattatagattaaacatgaccgattcttgttgt 84903


Query: 181 ggtcgttgtgaaccttgtaccgatgttgcatgtactcttcaagtcaaatattgtcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84902 ggtcgttgtgaaccttgtaccgatgttgcatgtactcttcaagtcaaatattgtcaagat 84843


Query: 241 ggtgaagttccaaccggttgttgtccatgtactctcccaccaaccaaaccagattgctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84842 ggtgaagttccaaccggttgttgtccatgtactctcccaccaaccaaaccagattgctcc 84783


Query: 301 cttgttaaatgtgctagaccagtatgtaaaccatattatagattaaacatgaccgattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84782 cttgttaaatgtgctagaccagtatgtaaaccatattatagattaaacatgaccgattct 84723


Query: 361 tgttgtggtcgttgtgaaccatgtacaggtgtcgcatgtactcttcaaatcaaatattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84722 tgttgtggtcgttgtgaaccatgtacaggtgtcgcatgtactcttcaaatcaaatattgt 84663


Query: 421 aaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaactaaaaaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84662 aaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaactaaaaaacca 84603


Query: 481 gattgttcaaaagttccatgtccaaagattttaaaatattgccaagaaggtgaacttcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84602 gattgttcaaaagttccatgtccaaagattttaaaatattgccaagaaggtgaacttcca 84543


Query: 541 actggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttcaagagttcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84542 actggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttcaagagttcca 84483


Query: 601 tgtccaaagattttgaaatactgtaaagaaggtgaacttccaactggttgttgtccatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84482 tgtccaaagattttgaaatactgtaaagaaggtgaacttccaactggttgttgtccatgt 84423


Query: 661 acacctcaaccaactaaaaaaccagattgttctgatgtaatgtgtacaatggacattaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84422 acacctcaaccaactaaaaaaccagattgttctgatgtaatgtgtacaatggacattaga 84363


Query: 721 tattgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaagaaaccaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84362 tattgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaagaaaccaaa 84303


Query: 781 gttccagattgttctaaagctatgtgcacaatggatattaaatattgtaaaccaggtgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84302 gttccagattgttctaaagctatgtgcacaatggatattaaatattgtaaaccaggtgaa 84243


Query: 841 aaaccctttggttgttgcccatgtcgtg 868
||||||||||||||||||||||||||||
Sbjct: 84242 aaaccctttggttgttgcccatgtcgtg 84215

Score = 283 bits (143), Expect(4) = e-137
Identities = 170/179 (94%)
Strand = Plus / Minus


Query: 514 aaatattgccaagaaggtgaacttccaactggttgttgtccatgtacacctcaaccaact 573
|||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 84671 aaatattgtaaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaact 84612


Query: 574 aaaaaaccagattgttcaagagttccatgtccaaagattttgaaatactgtaaagaaggt 633
||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||
Sbjct: 84611 aaaaaaccagattgttcaaaagttccatgtccaaagattttaaaatattgccaagaaggt 84552


Query: 634 gaacttccaactggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttc 692
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84551 gaacttccaactggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttc 84493

Score = 212 bits (107), Expect(4) = e-137
Identities = 152/167 (91%)
Strand = Plus / Minus


Query: 292 gattgctcccttgttaaatgtgctagaccagtatgtaaaccatattatagattaaacatg 351
||||||||||| |||| |||||| |||| |||||||||| |||||||||||||||||
Sbjct: 84977 gattgctccctcgttagatgtgcccaaccaatatgtaaacctcattatagattaaacatg 84918


Query: 352 accgattcttgttgtggtcgttgtgaaccatgtacaggtgtcgcatgtactcttcaaatc 411
||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||||| ||
Sbjct: 84917 accgattcttgttgtggtcgttgtgaaccttgtaccgatgttgcatgtactcttcaagtc 84858


Query: 412 aaatattgtaaagatggtgaagttccaactggttgttgtccatgtac 458
||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 84857 aaatattgtcaagatggtgaagttccaaccggttgttgtccatgtac 84811

Score = 63.9 bits (32), Expect(4) = e-137
Identities = 44/48 (91%)
Strand = Plus / Minus


Query: 724 tgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaa 771
|||||| | |||||||||||||||||||||||||| || |||||||||
Sbjct: 84461 tgtaaagaaggtgaacttccaactggttgttgtccatgtacacctcaa 84414

Score = 40.1 bits (20), Expect(4) = e-137
Identities = 41/48 (85%)
Strand = Plus / Minus


Query: 784 ccagattgttctaaagctatgtgcacaatggatattaaatattgtaaa 831
|||||||||||| | | ||||| |||||||| |||| ||||||||||
Sbjct: 84401 ccagattgttctgatgtaatgtgtacaatggacattagatattgtaaa 84354

Score = 283 bits (143), Expect(7) = e-135
Identities = 170/179 (94%)
Strand = Plus / Minus


Query: 412 aaatattgtaaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaact 471
|||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 84569 aaatattgccaagaaggtgaacttccaactggttgttgtccatgtacacctcaaccaact 84510


Query: 472 aaaaaaccagattgttcaaaagttccatgtccaaagattttaaaatattgccaagaaggt 531
||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||
Sbjct: 84509 aaaaaaccagattgttcaagagttccatgtccaaagattttgaaatactgtaaagaaggt 84450


Query: 532 gaacttccaactggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttc 590
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84449 gaacttccaactggttgttgtccatgtacacctcaaccaactaaaaaaccagattgttc 84391

Score = 212 bits (107), Expect(7) = e-135
Identities = 152/167 (91%)
Strand = Plus / Minus


Query: 106 gattgctccctcgttagatgtgcccaaccaatatgtaaacctcattatagattaaacatg 165
||||||||||| |||| |||||| |||| |||||||||| |||||||||||||||||
Sbjct: 84791 gattgctcccttgttaaatgtgctagaccagtatgtaaaccatattatagattaaacatg 84732


Query: 166 accgattcttgttgtggtcgttgtgaaccttgtaccgatgttgcatgtactcttcaagtc 225
||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||||| ||
Sbjct: 84731 accgattcttgttgtggtcgttgtgaaccatgtacaggtgtcgcatgtactcttcaaatc 84672


Query: 226 aaatattgtcaagatggtgaagttccaaccggttgttgtccatgtac 272
||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 84671 aaatattgtaaagatggtgaagttccaactggttgttgtccatgtac 84625

Score = 63.9 bits (32), Expect(7) = e-135
Identities = 44/48 (91%)
Strand = Plus / Minus


Query: 622 tgtaaagaaggtgaacttccaactggttgttgtccatgtacacctcaa 669
|||||| | |||||||||||||||||||||||||| || |||||||||
Sbjct: 84359 tgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaa 84312

Score = 40.1 bits (20), Expect(7) = e-135
Identities = 41/48 (85%)
Strand = Plus / Minus


Query: 682 ccagattgttctgatgtaatgtgtacaatggacattagatattgtaaa 729
|||||||||||| | | ||||| |||||||| |||| ||||||||||
Sbjct: 84299 ccagattgttctaaagctatgtgcacaatggatattaaatattgtaaa 84252

Score = 28.2 bits (14), Expect(7) = e-135
Identities = 17/18 (94%)
Strand = Plus / Minus


Query: 37 aataaactaatactatta 54
||||||||||| ||||||
Sbjct: 163726 aataaactaatgctatta 163709

Score = 26.3 bits (13), Expect(7) = e-135
Identities = 13/13 (100%)
Strand = Plus / Minus


Query: 814 gatattaaatatt 826
|||||||||||||
Sbjct: 30238 gatattaaatatt 30226

Score = 26.3 bits (13), Expect(7) = e-135
Identities = 13/13 (100%)
Strand = Plus / Minus


Query: 55 ttaattctatcaa 67
|||||||||||||
Sbjct: 151622 ttaattctatcaa 151610

Score = 129 bits (65), Expect(4) = 5e-42
Identities = 74/77 (96%)
Strand = Plus / Minus


Query: 412 aaatattgtaaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaact 471
||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 84467 aaatactgtaaagaaggtgaacttccaactggttgttgtccatgtacacctcaaccaact 84408


Query: 472 aaaaaaccagattgttc 488
|||||||||||||||||
Sbjct: 84407 aaaaaaccagattgttc 84391

Score = 61.9 bits (31), Expect(4) = 5e-42
Identities = 37/39 (94%)
Strand = Plus / Minus


Query: 529 ggtgaacttccaactggttgttgtccatgtacacctcaa 567
|||||||||||||||||||||||||| || |||||||||
Sbjct: 84350 ggtgaacttccaactggttgttgtccttgcacacctcaa 84312

Score = 61.9 bits (31), Expect(4) = 5e-42
Identities = 43/47 (91%)
Strand = Plus / Minus


Query: 226 aaatattgtcaagatggtgaagttccaaccggttgttgtccatgtac 272
|||||||| ||||| |||||| ||||||| |||||||||||||||||
Sbjct: 84569 aaatattgccaagaaggtgaacttccaactggttgttgtccatgtac 84523

Score = 26.3 bits (13), Expect(4) = 5e-42
Identities = 13/13 (100%)
Strand = Plus / Minus


Query: 606 aaagattttgaaa 618
|||||||||||||
Sbjct: 78188 aaagattttgaaa 78176

Score = 129 bits (65), Expect(5) = 3e-41
Identities = 74/77 (96%)
Strand = Plus / Minus


Query: 616 aaatactgtaaagaaggtgaacttccaactggttgttgtccatgtacacctcaaccaact 675
||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 84671 aaatattgtaaagatggtgaagttccaactggttgttgtccatgtacacctcaaccaact 84612


Query: 676 aaaaaaccagattgttc 692
|||||||||||||||||
Sbjct: 84611 aaaaaaccagattgttc 84595

Score = 61.9 bits (31), Expect(5) = 3e-41
Identities = 37/39 (94%)
Strand = Plus / Minus


Query: 733 ggtgaacttccaactggttgttgtccttgcacacctcaa 771
|||||||||||||||||||||||||| || |||||||||
Sbjct: 84554 ggtgaacttccaactggttgttgtccatgtacacctcaa 84516

Score = 61.9 bits (31), Expect(5) = 3e-41
Identities = 43/47 (91%)
Strand = Plus / Minus


Query: 514 aaatattgccaagaaggtgaacttccaactggttgttgtccatgtac 560
|||||||| ||||| |||||| ||||||| |||||||||||||||||
Sbjct: 84857 aaatattgtcaagatggtgaagttccaaccggttgttgtccatgtac 84811

Score = 26.3 bits (13), Expect(5) = 3e-41
Identities = 13/13 (100%)
Strand = Plus / Minus


Query: 808 acaatggatatta 820
|||||||||||||
Sbjct: 50410 acaatggatatta 50398

Score = 26.3 bits (13), Expect(5) = 3e-41
Identities = 13/13 (100%)
Strand = Plus / Minus


Query: 508 attttaaaatatt 520
|||||||||||||
Sbjct: 149486 attttaaaatatt 149474

Score = 71.9 bits (36), Expect(2) = 2e-14
Identities = 48/52 (92%)
Strand = Plus / Minus


Query: 414 atattgtaaagatggtgaagttccaactggttgttgtccatgtacacctcaa 465
|||||||||| |||||||| ||||||||||||||||||| || |||||||||
Sbjct: 84363 atattgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaa 84312

Score = 54.0 bits (27), Expect(2) = 2e-14
Identities = 42/47 (89%)
Strand = Plus / Minus


Query: 226 aaatattgtcaagatggtgaagttccaaccggttgttgtccatgtac 272
||||| ||| |||| |||||| ||||||| |||||||||||||||||
Sbjct: 84467 aaatactgtaaagaaggtgaacttccaactggttgttgtccatgtac 84421

Score = 71.9 bits (36), Expect(4) = 1e-12
Identities = 48/52 (92%)
Strand = Plus / Minus


Query: 720 atattgtaaaaatggtgaacttccaactggttgttgtccttgcacacctcaa 771
|||||||||| |||||||| ||||||||||||||||||| || |||||||||
Sbjct: 84669 atattgtaaagatggtgaagttccaactggttgttgtccatgtacacctcaa 84618

Score = 54.0 bits (27), Expect(4) = 1e-12
Identities = 42/47 (89%)
Strand = Plus / Minus


Query: 616 aaatactgtaaagaaggtgaacttccaactggttgttgtccatgtac 662
||||| ||| |||| |||||| ||||||| |||||||||||||||||
Sbjct: 84857 aaatattgtcaagatggtgaagttccaaccggttgttgtccatgtac 84811

Score = 26.3 bits (13), Expect(4) = 1e-12
Identities = 13/13 (100%)
Strand = Plus / Minus


Query: 606 aaagattttgaaa 618
|||||||||||||
Sbjct: 105174 aaagattttgaaa 105162

Score = 26.3 bits (13), Expect(4) = 1e-12
Identities = 13/13 (100%)
Strand = Plus / Minus


Query: 524 aagaaggtgaact 536
|||||||||||||
Sbjct: 173624 aagaaggtgaact 173612

Score = 46.1 bits (23), Expect = 2.5
Identities = 35/39 (89%)
Strand = Plus / Minus


Query: 228 atattgtcaagatggtgaagttccaaccggttgttgtcc 266
||||||| || |||||||| ||||||| |||||||||||
Sbjct: 84363 atattgtaaaaatggtgaacttccaactggttgttgtcc 84325

Score = 46.1 bits (23), Expect = 2.5
Identities = 35/39 (89%)
Strand = Plus / Minus


Query: 720 atattgtaaaaatggtgaacttccaactggttgttgtcc 758
||||||| || |||||||| ||||||| |||||||||||
Sbjct: 84855 atattgtcaagatggtgaagttccaaccggttgttgtcc 84817

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,021,752,114
Number of extensions: 59920409
Number of successful extensions: 4824802
Number of sequences better than 10.0: 97
Length of query: 946
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 922
Effective length of database: 100,704,341,533
Effective search space: 92849402893426
Effective search space used: 92849402893426
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.15
Homology vs Protein
Query= Contig-U15315-1 (Contig-U15315-1Q) /CSM_Contig/Contig-U15315-1Q.Seq.d
(946 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

YPDOD1(A23754)prestalk D11 protein precursor - slime mold (Dicty... 354 2e-96
(P04275) RecName: Full=von Willebrand factor; Short=vWF... 39 0.20
M10321_1(M10321|pid:none) Human von Willebrand factor mRNA, 3' e... 39 0.20
AK297600_1(AK297600|pid:none) Homo sapiens cDNA FLJ59036 complet... 39 0.20
AF196974_1(AF196974|pid:none) Carcinus maenas metallothionein Ib... 39 0.26
AC116956_29(AC116956|pid:none) Dictyostelium discoideum chromoso... 38 0.44
S59073(S59073)metallothionein isoform IIa - blue crab 38 0.58
(P55950) RecName: Full=Metallothionein-2B; Short=MT-2B;... 38 0.58
AY536890_1(AY536890|pid:none) Theromyzon rude cys-rich cocoon pr... 37 1.3
CP000481_1900(CP000481|pid:none) Acidothermus cellulolyticus 11B... 37 1.3
AK003994_1(AK003994|pid:none) Mus musculus 18-day embryo whole b... 36 1.7
AY057395_1(AY057395|pid:none) Portunus pelagicus metallothionein... 36 2.2
AE014297_479(AE014297|pid:none) Drosophila melanogaster chromoso... 35 2.9
AY057397_1(AY057397|pid:none) Scylla serrata metallothionein mRN... 35 3.7
X00821_1(X00821|pid:none) G.gallus type III collagen gene (exon ... 35 4.9
AM746676_8749(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 35 4.9
AB450036_1(AB450036|pid:none) Cratoxylum ligustrinum chloroplast... 35 4.9
(P12105) RecName: Full=Collagen alpha-1(III) chain; Flags: Precu... 35 4.9
AY057396_1(AY057396|pid:none) Eriocheir sinensis metallothionein... 35 4.9
A05269(A05269;A38035;A20855)collagen alpha 1(III) chain precurso... 35 4.9
CP001330_169(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 35 4.9
I50694(I50694) collagen alpha 1(III) chain - chicken (fragment) ... 35 4.9
AL590997_2(AL590997|pid:none) Mouse DNA sequence from clone RP23... 34 6.4
(Q8CIZ8) RecName: Full=von Willebrand factor; Short=vWF... 34 6.4
AF020591_1(AF020591|pid:none) Homo sapiens zinc finger protein m... 34 6.4
AY208897_1(AY208897|pid:none) Mus musculus von Willebrand factor... 34 6.4
DQ355287_1(DQ355287|pid:none) Mus musculus strain A/J VWF (Vwf) ... 34 6.4
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor; 34 8.4
(P02806) RecName: Full=Metallothionein-2; Short=MT-2; A... 34 8.4

>YPDOD1(A23754)prestalk D11 protein precursor - slime mold
(Dictyostelium discoideum)
Length = 282

Score = 354 bits (909), Expect = 2e-96
Identities = 174/263 (66%), Positives = 179/263 (68%)
Frame = +1

Query: 94 EVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVXXXXXXXX 273
EVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEV
Sbjct: 22 EVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCT 81

Query: 274 XXXXXXDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVXXXXXX 453
DCSLVKCA PVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYC+DGEV
Sbjct: 82 LPPTKPDCSLVKCATPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCQDGEVPTGCCP 141

Query: 454 XXXXXXXXXDCSKVPCPKILKYCQEGELXXXXXXXXXXXXXXXDCSRVPCPKILKYCKEG 633
+ KILKYCQEGEL KILKYCKEG
Sbjct: 142 CTLNQLKNQIVQEF-MSKILKYCQEGELPTGCCPCTLNQLKNQIVQEF-MSKILKYCKEG 199

Query: 634 ELXXXXXXXXXXXXXXXDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTM 813
EL +DVMCT+ + CKNGELPTGCCPCTPQETKV SKAMCTM
Sbjct: 200 ELPTGCCPCTLNQLKNQIGADVMCTVTLDSCKNGELPTGCCPCTPQETKVRRWSKAMCTM 259

Query: 814 DIKYCKPGEKPFGCCPCRENLTQ 882
IKYCKPGEKPFGCCPCRENLTQ
Sbjct: 260 HIKYCKPGEKPFGCCPCRENLTQ 282

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,455,395,576
Number of extensions: 28359522
Number of successful extensions: 68449
Number of sequences better than 10.0: 30
Number of HSP's gapped: 68002
Number of HSP's successfully gapped: 32
Length of query: 315
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 187
Effective length of database: 636,901,312
Effective search space: 119100545344
Effective search space used: 119100545344
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.97 gvh: 0.83 alm: 0.50 top: 0.27 tms: 0.00 mit: 0.38 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

64.0 %: extracellular, including cell wall
12.0 %: vacuolar
12.0 %: endoplasmic reticulum
8.0 %: mitochondrial
4.0 %: cytoplasmic

>> prediction for Contig-U15315-1 is exc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 1
SL (DIR, L) 2
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0