| Contig-U15308-1 |
| Contig ID |
Contig-U15308-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
2786 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
2132354 |
| End point |
2135140 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
33 |
| Number of EST |
44 |
| Link to clone list |
U15308 |
| List of clone(s) |
est1=AHD741F,1,200
est2=VHB662F,1,203
est3=VHC179F,1,204
est4=VHL632F,1,474
est5=VHP480F,6,202
est6=VHL320F,135,419
est7=VHP614F,170,734
est8=SLD730F,422,670
est9=VHP489F,462,1105
est10=VHM125F,545,1152
est11=VFL273F,993,1641
est12=SLB191E,1408,2736
est13=VHP480Z,1956,2691
est14=VHH621Z,1968,2738
est15=CHQ420Z,1971,2663
est16=VHP614Z,1971,2691
est17=VHB662Z,1973,2684
est18=VHK644Z,1974,2684
est19=VHL320Z,1986,2656
est20=VHM125Z,1986,2705
est21=VHE184Z,1987,2684
est22=VHH890Z,1989,2684
est23=VHN491Z,1991,2682
est24=VHP489Z,1991,2721
est25=CHN712Z,2000,2656
est26=VHD544Z,2027,2738
est27=VHD492Z,2048,2713
est28=VHH675Z,2048,2739
est29=VHQ459Z,2050,2717
est30=VHJ587Z,2072,2711
est31=VHC179Z,2074,2695
est32=VHG748Z,2076,2684
est33=VFL273Z,2084,2696
est34=VHL632Z,2103,2705
est35=VHO775Z,2118,2691
est36=SHA140Z,2153,2663
est37=CHK564Z,2181,2718
est38=FC-AI23Z,2184,2786
est39=VHG178Z,2362,2684
est40=AHO384Z,2370,2605
est41=VHM371Z,2381,2599
est42=AHD741Z,2406,2738
est43=VHD115Z,2504,2661
est44=SLD730Z,2625,2731
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1.18 |
| Homology vs DNA |
Query= Contig-U15308-1 (Contig-U15308-1Q) /CSM_Contig/Contig-U15308-1Q.Seq.d
(2786 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(Y00689) Dictyostelium discoideum mRNA for non-muscular alph... 3289 0.0 5
(AU060709) Dictyostelium discoideum slug cDNA, clone SLB191. 1394 0.0 1
(BJ441240) Dictyostelium discoideum cDNA clone:ddv46i06, 3' ... 1380 0.0 3
(BJ446194) Dictyostelium discoideum cDNA clone:ddv61p20, 3' ... 1368 0.0 2
(BJ385178) Dictyostelium discoideum cDNA clone:ddc54h06, 3' ... 1362 0.0 1
(BJ446254) Dictyostelium discoideum cDNA clone:ddv62k04, 3' ... 1360 0.0 2
(AU033581) Dictyostelium discoideum slug cDNA, clone SLB191. 1356 0.0 2
(BJ437558) Dictyostelium discoideum cDNA clone:ddv34k16, 3' ... 1352 0.0 2
(BJ438740) Dictyostelium discoideum cDNA clone:ddv38g11, 3' ... 1332 0.0 1
(BJ439235) Dictyostelium discoideum cDNA clone:ddv39g21, 3' ... 1324 0.0 2
(BJ446132) Dictyostelium discoideum cDNA clone:ddv61b24, 3' ... 1320 0.0 3
(BJ441464) Dictyostelium discoideum cDNA clone:ddv46e20, 3' ... 1316 0.0 1
(X04324) Dictyostelium discoideum gene fragment for alpha-ac... 1306 0.0 2
(BJ441462) Dictyostelium discoideum cDNA clone:ddv46d24, 3' ... 1296 0.0 2
(BJ443242) Dictyostelium discoideum cDNA clone:ddv52g12, 3' ... 1267 0.0 3
(BJ438413) Dictyostelium discoideum cDNA clone:ddv37h24, 3' ... 1263 0.0 2
(BJ444906) Dictyostelium discoideum cDNA clone:ddv57f24, 3' ... 1255 0.0 3
(BJ444098) Dictyostelium discoideum cDNA clone:ddv55a07, 3' ... 1241 0.0 4
(BJ443494) Dictyostelium discoideum cDNA clone:ddv53h05, 3' ... 1241 0.0 3
(BJ446699) Dictyostelium discoideum cDNA clone:ddv63f16, 3' ... 1227 0.0 2
(BJ442770) Dictyostelium discoideum cDNA clone:ddv50m21, 3' ... 1178 0.0 3
(BJ427233) Dictyostelium discoideum cDNA clone:ddv61b24, 5' ... 1170 0.0 2
(BJ437959) Dictyostelium discoideum cDNA clone:ddv35m19, 3' ... 1158 0.0 2
(BJ440698) Dictyostelium discoideum cDNA clone:ddv44p11, 3' ... 1154 0.0 2
(BJ415784) Dictyostelium discoideum cDNA clone:ddv23a20, 5' ... 1152 0.0 2
(BJ434042) Dictyostelium discoideum cDNA clone:ddv23a20, 3' ... 1132 0.0 2
(AX481253) Sequence 3 from Patent EP1225181. 1120 0.0 2
(AU284294) Dictyostelium discoideum gamete cDNA clone:FC-AI2... 1086 0.0 1
(BJ409361) Dictyostelium discoideum cDNA clone:dds41m06, 3' ... 1066 0.0 1
(BJ445839) Dictyostelium discoideum cDNA clone:ddv60f19, 3' ... 1063 0.0 2
(BJ427352) Dictyostelium discoideum cDNA clone:ddv62k04, 5' ... 1033 0.0 2
(BJ425281) Dictyostelium discoideum cDNA clone:ddv55a07, 5' ... 1001 0.0 2
(BJ443880) Dictyostelium discoideum cDNA clone:ddv54o08, 3' ... 999 0.0 4
(BJ384335) Dictyostelium discoideum cDNA clone:ddc49h03, 3' ... 682 0.0 4
(BJ382040) Dictyostelium discoideum cDNA clone:ddc43o15, 3' ... 946 0.0 2
(BJ403222) Dictyostelium discoideum cDNA clone:dds24o09, 3' ... 765 0.0 3
(BJ349973) Dictyostelium discoideum cDNA clone:dda38b11, 3' ... 505 e-153 3
(BJ440499) Dictyostelium discoideum cDNA clone:ddv43k19, 3' ... 515 e-152 3
(BJ424642) Dictyostelium discoideum cDNA clone:ddv53h05, 5' ... 440 e-144 2
(AU061310) Dictyostelium discoideum slug cDNA, clone SLD730. 410 e-125 2
(BJ444228) Dictyostelium discoideum cDNA clone:ddv55n17, 3' ... 400 e-106 1
(BJ425046) Dictyostelium discoideum cDNA clone:ddv54o08, 5' ... 313 e-105 3
(BJ356282) Dictyostelium discoideum cDNA clone:dda59h21, 3' ... 361 1e-94 1
(BJ438520) Dictyostelium discoideum cDNA clone:ddv37m03, 3' ... 305 5e-78 1
(AU052676) Dictyostelium discoideum slug cDNA, clone SLD730. 212 6e-50 1
(CX834854) ACAC-aaa57a04.g1 Hydra EST UCI 7 Hydra magnipapil... 76 2e-19 4
(DN810969) ACAC-aab37k23.g1 Hydra EST UCI 7 Hydra magnipapil... 76 2e-19 4
(DT608604) ACAG-aab01a10.g1 Hydra_EST_UCI-9 Hydra magnipapil... 76 2e-19 4
(DN812272) ACAC-aac07j07.g1 Hydra EST UCI 7 Hydra magnipapil... 76 2e-19 4
(CV863712) ACAB-aaa10d05.g1 Hydra UCI6- barcoded EST's Hydra... 76 2e-19 4
(DT610387) ACAG-aaa15e08.g1 Hydra_EST_UCI-9 Hydra magnipapil... 76 2e-19 4
(DT610970) ACAG-aab09b09.g1 Hydra_EST_UCI-9 Hydra magnipapil... 76 2e-19 4
(DN603488) ACAC-aac11j15.g1 Hydra EST UCI 7 Hydra magnipapil... 76 2e-19 4
(DT614453) ACAH-aaa26g10.g1 Hydra_EST_UCI-10 Hydra magnipapi... 76 3e-19 4
(BJ427295) Dictyostelium discoideum cDNA clone:ddv61p20, 5' ... 90 7e-17 2
(CK655800) AGENCOURT_18021332 XtSt10-30 Xenopus (Silurana) t... 80 9e-17 3
(CN326487) AGENCOURT_21860559 XtSt10-30 Xenopus (Silurana) t... 80 9e-17 3
(DN811108) ACAC-aab39n05.g1 Hydra EST UCI 7 Hydra magnipapil... 76 1e-16 3
(CX328695) JGI_XZT67741.fwd NIH_XGC_tropTad5 Xenopus (Silura... 80 2e-16 3
(DT531311) JGI_CABH3822.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 80 2e-16 3
(DT527922) JGI_CABH1988.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 80 2e-16 3
(DT395103) JGI_CABH10783.fwd NIH_XGC_tropSkeMus1 Xenopus (Si... 80 2e-16 3
(DN815224) ACAC-aac28j24.g1 Hydra EST UCI 7 Hydra magnipapil... 70 5e-16 4
(BJ332184) Dictyostelium discoideum cDNA clone:dda38b11, 5' ... 84 4e-15 2
(BC167932) Xenopus tropicalis cDNA clone MGC:135778 IMAGE:77... 80 5e-15 3
(FG699639) G1144P351RK2.T0 Anolis carolinensis pooled normal... 76 9e-15 3
(FG700184) G1144P313RM12.T0 Anolis carolinensis pooled norma... 76 1e-14 3
(DT392602) JGI_CABH9419.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 80 1e-14 3
(EH289146) Q2_Reed_16wk_TurkeyMuscle_01_E12_181.F 16_week Me... 60 4e-14 4
(EH285967) Q2_Reed_1DPH_cDNA_10_I18_281.F 1d_posthatch Melea... 60 5e-14 4
(EH287493) Q4_Reed_1DPH_cDNA_01_P16_256.F 1d_posthatch Melea... 60 5e-14 4
(DN811178) ACAC-aab40f04.g1 Hydra EST UCI 7 Hydra magnipapil... 76 7e-14 3
(DT607250) ACAH-aaa80g06.g1 Hydra_EST_UCI-10 Hydra magnipapi... 76 7e-14 3
(BJ419373) Dictyostelium discoideum cDNA clone:ddv35m19, 5' ... 78 2e-13 2
(BJ418974) Dictyostelium discoideum cDNA clone:ddv34k16, 5' ... 78 2e-13 2
(DT393887) JGI_CABH10117.fwd NIH_XGC_tropSkeMus1 Xenopus (Si... 80 6e-13 3
(DT392171) JGI_CABH9184.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 80 6e-13 3
(DT389881) JGI_CABH7940.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 80 9e-13 2
(BX744305) Xenopus tropicalis EST, clone TTpA032i13 5'. 80 9e-13 2
(DT394528) JGI_CABH10470.fwd NIH_XGC_tropSkeMus1 Xenopus (Si... 80 9e-13 2
(DT532143) JGI_CABH4277.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 80 9e-13 2
(DR892604) JGI_XZT24746.fwd NIH_XGC_tropTad5 Xenopus (Silura... 80 9e-13 2
(CX316785) JGI_XZT66576.fwd NIH_XGC_tropTad5 Xenopus (Silura... 80 9e-13 2
(EL798017) CBSW3885.b1 NICHD_XGC_tropTail_m Xenopus (Siluran... 80 9e-13 2
(DT387172) JGI_CABH6098.fwd NIH_XGC_tropSkeMus1 Xenopus (Sil... 80 9e-13 2
(EL642521) CBTC6735.fwd NICHD_XGC_tropBone1 Xenopus (Siluran... 80 9e-13 2
(EL709851) CBSU7297.fwd NICHD_XGC_tropLimb_m Xenopus (Silura... 80 9e-13 2
(EL805208) CBSW8301.b1 NICHD_XGC_tropTail_m Xenopus (Siluran... 80 9e-13 2
(CR440776) Xenopus tropicalis EST, clone TTbA051n04 5'. 72 5e-12 3
(EH294318) Q3_Reed_1DPH_02_01_69E09.F 1d_posthatch Meleagris... 60 7e-12 3
(EH286790) Q3_Reed_1DPH_cDNA_10_B13_194.F 1d_posthatch Melea... 60 8e-12 3
(BC076640) Xenopus laevis actinin, alpha 3, mRNA (cDNA clone... 86 9e-12 1
(CB942459) AGENCOURT_13852295 NICHD_XGC_Tad2 Xenopus laevis ... 86 9e-12 1
(BC043995) Xenopus laevis ACTN1 protein, mRNA (cDNA clone MG... 52 8e-11 5
(BJ030395) Xenopus laevis cDNA clone:XL004a10, 5' end, singl... 72 1e-10 2
(CU686527) Crassostrea gigas muscle subtracted library, resi... 82 1e-10 1
(CN052435) Salamander_11_L03.ab1 AG Ambystoma tigrinum tigri... 52 2e-10 3
(EL808092) CBSW11133.b1 NICHD_XGC_tropTail_m Xenopus (Silura... 80 5e-10 1
(EL795158) CBSW1726.b1 NICHD_XGC_tropTail_m Xenopus (Siluran... 80 5e-10 1
(CR418061) Xenopus tropicalis EST, clone TTbA018f09 5'. 80 5e-10 1
>(Y00689) Dictyostelium discoideum mRNA for non-muscular alpha-actinin
3.
Length = 2709
Score = 3289 bits (1659), Expect(5) = 0.0
Identities = 1668/1671 (99%)
Strand = Plus / Plus
Query: 1061 ccgaaaaaccaccaaagggtcaagaagtctctgaattggaagctatctacaattcattac 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 ccgaaaaaccaccaaagggtcaagaagtctctgaattggaagctatctacaattcattac 1087
Query: 1121 aaactaaattacgtttaattaaacgtgaaccatttgttgcaccagctggtctcactccaa 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 aaactaaattacgtttaattaaacgtgaaccatttgttgcaccagctggtctcactccaa 1147
Query: 1181 atgaaatcgattccacttggtccgctttagagaaagctgaacaagaacatgctgaagccc 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 atgaaatcgattccacttggtccgctttagagaaagctgaacaagaacatgctgaagccc 1207
Query: 1241 tccgtattgaactcaaacgtcaaaagaaaattgcagttctcttacaaaaatacaatcgta 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 tccgtattgaactcaaacgtcaaaagaaaattgcagttctcttacaaaaatacaatcgta 1267
Query: 1301 ttctcaagaaactcgaaaactgggccaccaccaaatctgtctacctcggttccaatgaaa 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 ttctcaagaaactcgaaaactgggccaccaccaaatctgtctacctcggttccaatgaaa 1327
Query: 1361 ccggtgacagtatcactgctgttcaagctaaattaaagaatttagaagcttttgatggtg 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 ccggtgacagtatcactgctgttcaagctaaattaaagaatttagaagcttttgatggtg 1387
Query: 1421 aatgtcaatcattggaaggtcaatcaaactctgatctcctcagcattcttgctcaattaa 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 aatgtcaatcattggaaggtcaatcaaactctgatctcctcagcattcttgctcaattaa 1447
Query: 1481 ctgaactcaactacaatggtgtaccagaactcactgaacgtaaagatacattctttgctc 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 ctgaactcaactacaatggtgtaccagaactcactgaacgtaaagatacattctttgctc 1507
Query: 1541 aacaatggactggtgttaaatcatctgctgaaacctacaaaaacactcttttagctgaac 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 aacaatggactggtgttaaatcatctgctgaaacctacaaaaacactcttttagctgaac 1567
Query: 1601 ttgaaagactccaaaagattgaagactcattggtcgaattcgccaagagagccgctcaat 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 ttgaaagactccaaaagattgaagactcattggtcgaattcgccaagagagccgctcaat 1627
Query: 1661 taaatgtttggattgaagctgccgatgatcatgtatttgatccaatcaatgttgactctg 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 taaatgtttggattgaagctgccgatgatcatgtatttgatccaatcaatgttgactctg 1687
Query: 1721 ttcaaggtgtccaagaaattcaagagaaattcgacgctttcctccacgatcaatcacaac 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 ttcaaggtgtccaagaaattcaagagaaattcgacgctttcctccacgatcaatcacaac 1747
Query: 1781 aattcgctgaattggaagccctcgctgctttaactcaacaactccgtgaactcggtcgtt 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1748 aattcgctgaattggaagccctcgctgctttaactcaacaactccgtgaactcggtcgtt 1807
Query: 1841 ctgaaaacgattattcagtcatttcatacgatgaactctctgccaaatggaataatttat 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 ctgaaaacgattattcagtcatttcatacgatgaactctctgccaaatggaataatttat 1867
Query: 1901 tggctggtattgaagaacgtaaagttcaactcgccaatgaactcaccactcaaaccaaca 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1868 tggctggtattgaagaacgtaaagttcaactcgccaatgaactcaccactcaaaccaaca 1927
Query: 1961 acgatgttctttgccaatcattctctgttaaagcaaatgaaatttcagattatgtccgtg 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1928 acgatgttctttgccaatcattctctgttaaagcaaatgaaatttcagattatgtccgtg 1987
Query: 2021 ttactttagatgccatctcacaaaacacttcatcagatccacaagaacaattaaacaata 2080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 ttactttagatgccatctcacaaaacacttcatcagatccacaagaacaattaaacaata 2047
Query: 2081 tccgtgctatcatcaccgctcatgctgaaaagaaaccagaactcgatgaattatacacca 2140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2048 tccgtgctatcatcaccgctcatgctgaaaagaaaccagaactcgatgaattatacacca 2107
Query: 2141 ttgcttctcaactcgaagaagctcaagttgtcgataacaaacatactcaacacagtttag 2200
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2108 ttcgttctcaactcgaagaagctcaagttgtcgataacaaacatactcaacacagtttag 2167
Query: 2201 aatcaattaaattaaaatgggataaactcaatacactcgctaaaaagaatgaacaagttg 2260
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2168 aatcacttaaattaaaatgggataaactcaatacactcgctaaaaagaatgaacaagttg 2227
Query: 2261 ttgaaggtgaaattcttgctaaacaattaactggtgttactgctgaagaattaagtgaat 2320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 ttgaaggtgaaattcttgctaaacaattaactggtgttactgctgaagaattaagtgaat 2287
Query: 2321 ttaaagcctgcttctcacatttcgataaggacaacgataacaaattaaatcgtcttgaat 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 ttaaagcctgcttctcacatttcgataaggacaacgataacaaattaaatcgtcttgaat 2347
Query: 2381 tctcctcttgcttgaagagtatcggagatgaattaactgaagaacaattaaatcaagtca 2440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 tctcctcttgcttgaagagtatcggagatgaattaactgaagaacaattaaatcaagtca 2407
Query: 2441 tcagtaaaatcgataccgatggtaatggtaccatttcattcgaagaatttattgattaca 2500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2408 tcagtaaaatcgataccgatggtaatggtaccatttcattcgaagaatttattgattaca 2467
Query: 2501 tggtttcatcacgtaaaggtacagacagcgttgaatcaactaaagctgcattcaaagtta 2560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2468 tggtttcatcacgtaaaggtacagacagcgttgaatcaactaaagctgcattcaaagtta 2527
Query: 2561 tggctgaggataaagatttcattactgaagctcaaattcgtgctgctatctctgattcta 2620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2528 tggctgaggataaagatttcattactgaagctcaaattcgtgctgctatctctgattcta 2587
Query: 2621 aacaaattgattatttactcgccagtatgccagctgttgaaggtggttttgactacaatt 2680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2588 aacaaattgattatttactcgccagtatgccagctgttgaaggtggttttgactacaatt 2647
Query: 2681 catttgctgaaaaattataccaataaacaaataattattaattataaatac 2731
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2648 catttgctgaaaaattataccaataaacaaataattattaattataaatac 2698
Score = 1386 bits (699), Expect(5) = 0.0
Identities = 702/703 (99%)
Strand = Plus / Plus
Query: 351 aagaattcataatatccaaaatgttggtctctgtttaaaacatattgaatcacatggtgt 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aagaattcataatatccaaaatgttggtctctgtttaaaacatattgaatcacatggtgt 377
Query: 411 taaattggttggtattggtgctgaagagttagttgataaaaacttaaagatgactttggg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taaattggttggtattggtgctgaagagttagttgataaaaacttaaagatgactttggg 437
Query: 471 tatgatttggacaatcattcttcgttttgccattcaagatatttcaattgaagaattgag 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tatgatttggacaatcattcttcgttttgccattcaagatatttcaattgaagaattgag 497
Query: 531 tgccaaagaagcccttttactttggtgtcaaagaaagaccgaaggctatgaccgtgttaa 590
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 498 tgccaaagaagcccttttactttggtgtcaaagaaagaccgaaggttatgaccgtgttaa 557
Query: 591 agttggtaatttccatacctcattccaagatggtcttgccttttgtgctctcatccataa 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agttggtaatttccatacctcattccaagatggtcttgccttttgtgctctcatccataa 617
Query: 651 acatagaccagatttaatcaactttgactctttaaacaaagatgataaagctggtaactt 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acatagaccagatttaatcaactttgactctttaaacaaagatgataaagctggtaactt 677
Query: 711 acaattggcttttgatattgccgaaaaagaattggatatcccaaagatgttggatgtttc 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 acaattggcttttgatattgccgaaaaagaattggatatcccaaagatgttggatgtttc 737
Query: 771 cgatatgctcgatgtcgttcgtccagatgaaagatcagtcatgacctacgtcgctcaata 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cgatatgctcgatgtcgttcgtccagatgaaagatcagtcatgacctacgtcgctcaata 797
Query: 831 ctaccatcacttttctgcctctagaaaagctgaaaccgccggtaaacaagttggtaaagt 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ctaccatcacttttctgcctctagaaaagctgaaaccgccggtaaacaagttggtaaagt 857
Query: 891 tttagatacctttatgttgttagaacaaaccaaatctgattatcttaaaagagccaatga 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 tttagatacctttatgttgttagaacaaaccaaatctgattatcttaaaagagccaatga 917
Query: 951 actcgttcaatggattaacgataaacaagcatcacttgaatcacgtgattttggtgattc 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 actcgttcaatggattaacgataaacaagcatcacttgaatcacgtgattttggtgattc 977
Query: 1011 catcgaatctgttcaaagtttcatgaacgctcataaagaatat 1053
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 catcgaatctgttcaaagtttcatgaacgctcataaagaatat 1020
Score = 309 bits (156), Expect(5) = 0.0
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 200 ctttcacagcatggtgtaattcacatttacgtaaacttggatcatcaattgaacaaattg 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ctttcacagcatggtgtaattcacatttacgtaaacttggatcatcaattgaacaaattg 223
Query: 260 atacagattttactgatggtattaaattagctcaattattagaagttatttcaaatgatc 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atacagattttactgatggtattaaattagctcaattattagaagttatttcaaatgatc 283
Query: 320 cagtatttaaagtaaacaaaacaccaaaattaagaa 355
||||||||||||||||||||||||||||||||||||
Sbjct: 284 cagtatttaaagtaaacaaaacaccaaaattaagaa 319
Score = 109 bits (55), Expect(5) = 0.0
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 132 ccanccccagtttcaggtaatgacaaacaactcttgaacaaagcttgggaaattaccc 189
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ccaaccccagtttcaggtaatgacaaacaactcttgaacaaagcttgggaaattaccc 154
Score = 30.2 bits (15), Expect(5) = 0.0
Identities = 28/34 (82%)
Strand = Plus / Plus
Query: 91 gtaaattaatanccccncntaaaancaaaangtc 124
||||||||||| || | | ||||| ||||| |||
Sbjct: 56 gtaaattaataaccacacataaaaacaaaatgtc 89
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,957,558,058
Number of extensions: 163826903
Number of successful extensions: 12828729
Number of sequences better than 10.0: 463
Length of query: 2786
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2761
Effective length of database: 100,606,115,110
Effective search space: 277773483818710
Effective search space used: 277773483818710
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 7.15 |
| Homology vs Protein |
Query= Contig-U15308-1 (Contig-U15308-1Q) /CSM_Contig/Contig-U15308-1Q.Seq.d
(2786 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FADOAA(S00103;A29006) alpha-actinin - slime mold (Dictyostelium ... 1580 0.0
X04324_1(X04324|pid:none) Dictyostelium discoideum gene fragment... 811 0.0
A42162(A42162;S02033;A29555;A28450) alpha-actinin 1 - chicken &... 577 e-163
(P05094) RecName: Full=Alpha-actinin-1; AltName: Full=Alpha-acti... 577 e-162
AK315250_1(AK315250|pid:none) Homo sapiens cDNA, FLJ96254, highl... 576 e-162
BC070594_1(BC070594|pid:none) Xenopus laevis hypothetical protei... 573 e-162
(P35609) RecName: Full=Alpha-actinin-2; AltName: Full=Alpha-acti... 572 e-161
BT058991_1(BT058991|pid:none) Salmo salar clone ssal-rgf-518-135... 572 e-161
AY036877_1(AY036877|pid:none) Mus musculus actinin alpha 2 (Actn... 571 e-161
(P20111) RecName: Full=Alpha-actinin-2; AltName: Full=Alpha-acti... 571 e-161
(Q7TPR4) RecName: Full=Alpha-actinin-1; AltName: Full=Alpha-acti... 571 e-161
DQ288940_1(DQ288940|pid:none) Mus musculus alpha actinin 1a (Act... 570 e-160
EF512630_1(EF512630|pid:none) Bos taurus alpha-actinin 1 (ACTN1)... 569 e-160
BC074001_1(BC074001|pid:none) Rattus norvegicus actinin, alpha 1... 568 e-160
(Q2PFV7) RecName: Full=Alpha-actinin-1; AltName: Full=Alpha-acti... 568 e-160
CR361558_3(CR361558|pid:none) Zebrafish DNA sequence from clone ... 568 e-160
AY892038_1(AY892038|pid:none) Synthetic construct Homo sapiens c... 568 e-160
(P12814) RecName: Full=Alpha-actinin-1; AltName: Full=Alpha-acti... 568 e-160
AK295099_1(AK295099|pid:none) Homo sapiens cDNA FLJ59209 complet... 566 e-159
BC076938_1(BC076938|pid:none) Xenopus tropicalis actinin, alpha ... 566 e-159
AE014298_320(AE014298|pid:none) Drosophila melanogaster chromoso... 563 e-158
BC054901_1(BC054901|pid:none) Danio rerio actinin, alpha 4, mRNA... 563 e-158
D89980_1(D89980|pid:none) Homo sapiens mRNA for alpha actinin 4,... 562 e-158
(O43707) RecName: Full=Alpha-actinin-4; AltName: Full=Non-muscle... 562 e-158
AE014298_321(AE014298|pid:none) Drosophila melanogaster chromoso... 561 e-158
(Q5RCS6) RecName: Full=Alpha-actinin-4; AltName: Full=Non-muscle... 561 e-158
(Q9JI91) RecName: Full=Alpha-actinin-2; AltName: Full=Alpha-acti... 560 e-157
AY437436_1(AY437436|pid:none) Rattus norvegicus brain-specific a... 560 e-157
BC167932_1(BC167932|pid:none) Xenopus tropicalis cDNA clone MGC:... 559 e-157
DQ496098_1(DQ496098|pid:none) Homo sapiens actinin alpha 1 isofo... 558 e-157
BC076640_1(BC076640|pid:none) Xenopus laevis actinin, alpha 3, m... 558 e-157
(Q9QXQ0) RecName: Full=Alpha-actinin-4; AltName: Full=Non-muscle... 556 e-156
FAFFAA(A35598;S10436)alpha-actinin - fruit fly (Drosophila melan... 556 e-156
BC077918_1(BC077918|pid:none) Xenopus laevis actinin, alpha 4, m... 556 e-156
AK150044_1(AK150044|pid:none) Mus musculus bone marrow macrophag... 555 e-156
BC065595_1(BC065595|pid:none) Danio rerio actinin alpha 3b, mRNA... 555 e-156
(Q7PKQ5) RecName: Full=Alpha-actinin, sarcomeric; AltName: Full=... 554 e-156
BC076687_1(BC076687|pid:none) Xenopus tropicalis actinin, alpha ... 551 e-155
(P18091) RecName: Full=Alpha-actinin, sarcomeric; AltName: Full=... 550 e-154
AY096238_1(AY096238|pid:none) Rattus norvegicus truncated alpha-... 547 e-154
AF450248_1(AF450248|pid:none) Rattus norvegicus skeletal muscle-... 547 e-154
(Q0III9) RecName: Full=Alpha-actinin-3; AltName: Full=Alpha-acti... 547 e-154
BC099647_1(BC099647|pid:none) Homo sapiens actinin, alpha 3, mRN... 545 e-153
FN357368_13(FN357368|pid:none) Schistosoma mansoni genome sequen... 543 e-152
AK303044_1(AK303044|pid:none) Homo sapiens cDNA FLJ58651 complet... 543 e-152
AK313556_1(AK313556|pid:none) Homo sapiens cDNA, FLJ94117, highl... 543 e-152
(Q08043) RecName: Full=Alpha-actinin-3; AltName: Full=Alpha-acti... 541 e-152
U19893_1(U19893|pid:none) Rattus norvegicus alpha actinin mRNA, ... 534 e-150
AK294906_1(AK294906|pid:none) Homo sapiens cDNA FLJ51840 complet... 525 e-147
AK298496_1(AK298496|pid:none) Homo sapiens cDNA FLJ54739 complet... 518 e-145
T26147(T26147) hypothetical protein W04D2.1a - Caenorhabditis el... 516 e-144
A48403(A48403)alpha-actinin - Caenorhabditis elegans (fragment) 515 e-144
AF484962_1(AF484962|pid:none) Biomphalaria glabrata alpha-actini... 493 e-137
J02666_1(J02666|pid:none) Chicken alpha-actinin mRNA, partial cds. 476 e-132
BX248020_1(BX248020|pid:none) human full-length cDNA clone CS0DB... 416 e-114
FN357316_44(FN357316|pid:none) Schistosoma mansoni genome sequen... 410 e-112
AK304554_1(AK304554|pid:none) Homo sapiens cDNA FLJ58087 complet... 384 e-104
AK299955_1(AK299955|pid:none) Homo sapiens cDNA FLJ61380 complet... 349 4e-94
BC108564_1(BC108564|pid:none) Xenopus laevis hypothetical protei... 348 6e-94
(Q9QWN8) RecName: Full=Spectrin beta chain, brain 2; AltName: Fu... 335 5e-90
BC079860_1(BC079860|pid:none) Mus musculus spectrin beta 3, mRNA... 335 5e-90
AK147671_1(AK147671|pid:none) Mus musculus adult male brain UNDE... 335 5e-90
AF225960_1(AF225960|pid:none) Rattus norvegicus spectrin-like pr... 333 2e-89
BC139788_1(BC139788|pid:none) Homo sapiens spectrin, beta, non-e... 332 5e-89
(O15020) RecName: Full=Spectrin beta chain, brain 2; AltName: Fu... 332 5e-89
BX276181_2(BX276181|pid:none) Zebrafish DNA sequence from clone ... 329 4e-88
CT025939_3(CT025939|pid:none) Zebrafish DNA sequence from clone ... 329 4e-88
AK220456_1(AK220456|pid:none) Mus musculus mRNA for mKIAA4049 pr... 329 4e-88
M74773_1(M74773|pid:none) Mus musculus brain beta spectrin (Spnb... 328 5e-88
(Q01082) RecName: Full=Spectrin beta chain, brain 1; AltName: Fu... 328 5e-88
BC137282_1(BC137282|pid:none) Homo sapiens spectrin, beta, non-e... 328 5e-88
AK157727_1(AK157727|pid:none) Mus musculus 9.5 days embryo parth... 328 5e-88
AB209748_1(AB209748|pid:none) Homo sapiens mRNA for spectrin, be... 328 5e-88
U64854_1(U64854|pid:none) Caenorhabditis elegans cosmid K11C4, c... 328 9e-88
AF166170_1(AF166170|pid:none) Caenorhabditis elegans beta-G spec... 328 9e-88
BC095643_1(BC095643|pid:none) Danio rerio hypothetical protein L... 327 2e-87
AY238344_1(AY238344|pid:none) Rattus norvegicus non-erythroid sp... 327 2e-87
T23630(T23630;T24242)hypothetical protein R31.1 - Caenorhabditis... 326 3e-87
AF053496_1(AF053496|pid:none) Caenorhabditis elegans beta chain ... 326 3e-87
Z75956_1(Z75956|pid:none) Caenorhabditis elegans Cosmid R31, com... 326 3e-87
A46147(A46147;A33657) spectrin beta chain - fruit fly (Drosophil... 323 3e-86
BT011160_1(BT011160|pid:none) Drosophila melanogaster AT24411 fu... 323 3e-86
BC124113_1(BC124113|pid:none) Danio rerio similar to Spectrin be... 314 1e-83
AK297618_1(AK297618|pid:none) Homo sapiens cDNA FLJ55142 complet... 313 3e-83
BC150783_1(BC150783|pid:none) Mus musculus spectrin beta 1, mRNA... 312 5e-83
AB209415_1(AB209415|pid:none) Homo sapiens mRNA for spectrin, be... 311 6e-83
AF324063_1(AF324063|pid:none) Homo sapiens non-erythrocytic beta... 311 6e-83
BC136284_1(BC136284|pid:none) Homo sapiens spectrin, beta, eryth... 311 6e-83
AF324064_1(AF324064|pid:none) Homo sapiens beta spectrin IV mRNA... 311 6e-83
(Q9H254) RecName: Full=Spectrin beta chain, brain 3; AltName: Fu... 311 6e-83
AF311855_1(AF311855|pid:none) Homo sapiens spectrin beta IV (SPT... 311 6e-83
AB384944_1(AB384944|pid:none) Synthetic construct DNA, clone: pF... 311 6e-83
AF082075_1(AF082075|pid:none) Homo sapiens beta4sigma1 spectrin ... 311 6e-83
AY238343_1(AY238343|pid:none) Rattus norvegicus erythroid spectr... 311 8e-83
CU595952_2(CU595952|pid:none) Zebrafish DNA sequence from clone ... 309 3e-82
J05500_1(J05500|pid:none) Human beta-spectrin (SPTB) mRNA, compl... 308 5e-82
X53992_1(X53992|pid:none) D.melanogaster mRNA for beta-H spectrin. 308 5e-82
AE014296_690(AE014296|pid:none) Drosophila melanogaster chromoso... 308 5e-82
J05500_2(J05500|pid:none) Human beta-spectrin (SPTB) mRNA, compl... 308 5e-82
AY032655_1(AY032655|pid:none) Mus musculus beta4-spectrin mRNA, ... 308 7e-82
AB055618_1(AB055618|pid:none) Mus musculus mRNA for betaIV-spect... 308 7e-82
AY043279_1(AY043279|pid:none) Brugia malayi beta-G spectrin gene... 305 8e-81
FN357387_2(FN357387|pid:none) Schistosoma mansoni genome sequenc... 304 1e-80
FN357387_3(FN357387|pid:none) Schistosoma mansoni genome sequenc... 304 1e-80
(P15508) RecName: Full=Spectrin beta chain, erythrocyte; AltName... 302 5e-80
AF262336_1(AF262336|pid:none) Danio rerio beta-spectrin (sptb) m... 298 6e-79
AB209521_1(AB209521|pid:none) Homo sapiens mRNA for actinin, alp... 298 7e-79
FM200072_1(FM200072|pid:none) Histomonas meleagridis partial mRN... 296 3e-78
AK297886_1(AK297886|pid:none) Homo sapiens cDNA FLJ55401 complet... 295 6e-78
EU714150_1(EU714150|pid:none) Epinephelus coioides alpha actinin... 295 8e-78
BC167879_1(BC167879|pid:none) Xenopus tropicalis cDNA clone MGC:... 289 3e-76
AP007164_653(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 281 1e-73
BC015620_1(BC015620|pid:none) Homo sapiens actinin, alpha 4, mRN... 275 5e-72
AE017343_609(AE017343|pid:none) Cryptococcus neoformans var. neo... 273 3e-71
BC096323_1(BC096323|pid:none) Homo sapiens actinin, alpha 3, mRN... 259 3e-67
X55187_1(X55187|pid:none) Human mRNA for alpha-actinin, partial ... 258 1e-66
(Q9NRC6) RecName: Full=Spectrin beta chain, brain 4; AltName: Fu... 250 2e-64
BC114848_1(BC114848|pid:none) Bos taurus spectrin, beta, non-ery... 230 2e-58
BC027791_1(BC027791|pid:none) Mus musculus spectrin alpha 2, mRN... 228 9e-58
BC172095_1(BC172095|pid:none) Mus musculus spectrin alpha 2, mRN... 228 9e-58
AL928926_21(AL928926|pid:none) Mouse DNA sequence from clone RP2... 228 9e-58
AL928926_22(AL928926|pid:none) Mouse DNA sequence from clone RP2... 228 9e-58
(P16086) RecName: Full=Spectrin alpha chain, brain; AltName: Ful... 228 9e-58
BC070885_1(BC070885|pid:none) Rattus norvegicus alpha-spectrin 2... 228 9e-58
AL928926_19(AL928926|pid:none) Mouse DNA sequence from clone RP2... 228 9e-58
BC158015_1(BC158015|pid:none) Mus musculus spectrin alpha 2, mRN... 228 1e-57
AK158599_1(AK158599|pid:none) Mus musculus visual cortex cDNA, R... 224 1e-56
AB209860_1(AB209860|pid:none) Homo sapiens mRNA for spectrin, al... 224 1e-56
X14519_1(X14519|pid:none) Gallus gallus partial mRNA for spectri... 224 1e-56
X90845_1(X90845|pid:none) R.norvegicus mRNA for alpha II spectrin. 224 1e-56
AL356481_3(AL356481|pid:none) Human DNA sequence from clone RP11... 224 1e-56
AB191262_1(AB191262|pid:none) Homo sapiens SPTAN1 mRNA for non-e... 224 1e-56
AK011566_1(AK011566|pid:none) Mus musculus 10 days embryo whole ... 224 2e-56
CR858262_1(CR858262|pid:none) Pongo abelii mRNA; cDNA DKFZp469H1... 223 4e-56
(Q9UGD7) RecName: Full=Bullous pemphigoid antigen 1, isoforms 1/... 222 7e-56
U83867_1(U83867|pid:none) Human alpha II spectrin mRNA, complete... 222 7e-56
AK299898_1(AK299898|pid:none) Homo sapiens cDNA FLJ59296 partial... 222 7e-56
AL096710_1(AL096710|pid:none) Human DNA sequence from clone RP1-... 222 7e-56
AL096710_6(AL096710|pid:none) Human DNA sequence from clone RP1-... 222 7e-56
AL096710_2(AL096710|pid:none) Human DNA sequence from clone RP1-... 222 7e-56
EF375552_1(EF375552|pid:none) Danio rerio alpha II-spectrin mRNA... 221 1e-55
AF072678_1(AF072678|pid:none) Trichomonas vaginalis alpha-actini... 221 1e-55
I49290(I49290) dystonin - mouse (fragment) &U22452_1(U22452|pid... 219 6e-55
(Q91ZU6) RecName: Full=Bullous pemphigoid antigen 1, isoforms 1/... 219 6e-55
AK294317_1(AK294317|pid:none) Homo sapiens cDNA FLJ53313 complet... 218 1e-54
AY480031_1(AY480031|pid:none) Rattus norvegicus plectin 10 mRNA,... 217 2e-54
AF188012_1(AF188012|pid:none) Mus musculus plectin isoform plec ... 217 2e-54
AY480039_1(AY480039|pid:none) Mus musculus plectin 7 mRNA, compl... 217 2e-54
AF014928_1(AF014928|pid:none) Trichomonas vaginalis alpha actini... 217 2e-54
AY480027_1(AY480027|pid:none) Rattus norvegicus plectin 6 mRNA, ... 217 2e-54
A35715(A35715;A28580;I52382;A61369;G01810;S54877;S65689) fodrin ... 217 2e-54
AY480038_1(AY480038|pid:none) Mus musculus plectin 6 mRNA, compl... 217 2e-54
AY480029_1(AY480029|pid:none) Rattus norvegicus plectin 8 mRNA, ... 217 2e-54
AY480043_1(AY480043|pid:none) Mus musculus plectin 11 mRNA, comp... 217 2e-54
AY480023_1(AY480023|pid:none) Rattus norvegicus plectin 2 mRNA, ... 217 2e-54
AY480033_1(AY480033|pid:none) Mus musculus plectin 1 mRNA, compl... 217 2e-54
AY480032_1(AY480032|pid:none) Rattus norvegicus plectin 11 mRNA,... 217 2e-54
(P30427) RecName: Full=Plectin-1; Short=PLTN; ... 215 8e-54
AJ011925_1(AJ011925|pid:none) Drosophila melanogaster mRNA for K... 214 1e-53
BC159134_1(BC159134|pid:none) Xenopus tropicalis hypothetical pr... 213 2e-53
AE013599_1876(AE013599|pid:none) Drosophila melanogaster chromos... 213 3e-53
BC099929_1(BC099929|pid:none) Mus musculus plectin 1, mRNA (cDNA... 213 3e-53
AE013599_1869(AE013599|pid:none) Drosophila melanogaster chromos... 213 3e-53
AE013599_1871(AE013599|pid:none) Drosophila melanogaster chromos... 213 3e-53
AE013599_1870(AE013599|pid:none) Drosophila melanogaster chromos... 213 3e-53
AE013599_1875(AE013599|pid:none) Drosophila melanogaster chromos... 213 3e-53
AE013599_1873(AE013599|pid:none) Drosophila melanogaster chromos... 213 3e-53
AE013599_1877(AE013599|pid:none) Drosophila melanogaster chromos... 213 3e-53
AY480051_1(AY480051|pid:none) Homo sapiens plectin 11 mRNA, comp... 212 7e-53
AY480045_1(AY480045|pid:none) Homo sapiens plectin 2 mRNA, compl... 212 7e-53
AY480044_1(AY480044|pid:none) Homo sapiens plectin 1 mRNA, compl... 212 7e-53
AY480046_1(AY480046|pid:none) Homo sapiens plectin 3 mRNA, compl... 212 7e-53
AY480048_1(AY480048|pid:none) Homo sapiens plectin 7 mRNA, compl... 212 7e-53
(Q6S381) RecName: Full=Plectin-1; Short=PLTN; ... 212 7e-53
AY480049_1(AY480049|pid:none) Homo sapiens plectin 8 mRNA, compl... 212 7e-53
AF188011_1(AF188011|pid:none) Mus musculus plectin isoform plec ... 211 1e-52
AF188008_1(AF188008|pid:none) Mus musculus plectin isoform plec ... 211 1e-52
CR855260_1(CR855260|pid:none) Zebrafish DNA sequence from clone ... 211 2e-52
BC095230_1(BC095230|pid:none) Danio rerio si:dkey-151c10.1, mRNA... 211 2e-52
BX004821_1(BX004821|pid:none) Zebrafish DNA sequence from clone ... 209 6e-52
AF188013_1(AF188013|pid:none) Mus musculus plectin isoform plec ... 208 8e-52
BC091776_1(BC091776|pid:none) Mus musculus spectrin alpha 2, mRN... 206 3e-51
T16613(T16613) hypothetical protein K10B3.10 - Caenorhabditis el... 205 6e-51
AF141968_1(AF141968|pid:none) Homo sapiens trabeculin-alpha mRNA... 204 1e-50
AK143540_1(AK143540|pid:none) Mus musculus 12 days embryo whole ... 202 4e-50
AL606918_3(AL606918|pid:none) Mouse DNA sequence from clone RP23... 202 4e-50
AL606918_14(AL606918|pid:none) Mouse DNA sequence from clone RP2... 202 4e-50
AL606918_5(AL606918|pid:none) Mouse DNA sequence from clone RP23... 202 4e-50
(Q9JI55) RecName: Full=Plectin-1; Short=PLTN; ... 202 7e-50
T30847(T30847) actin binding protein ACF7, neural isoform 2 - mo... 201 9e-50
DQ067088_1(DQ067088|pid:none) Mus musculus microtubule-actin cro... 199 4e-49
L08068_1(L08068|pid:none) Physarum polycephalum actin-binding pr... 195 7e-48
CS673508_1(CS673508|pid:none) Sequence 83 from Patent WO20070601... 192 7e-47
AF188021_1(AF188021|pid:none) Mus musculus plectin isoform plec ... 191 1e-46
AL590451_29(AL590451|pid:none) chromosome IX of strain GB-M1 of ... 189 4e-46
AL606918_4(AL606918|pid:none) Mouse DNA sequence from clone RP23... 187 2e-45
BC003232_1(BC003232|pid:none) Mus musculus actinin, alpha 1, mRN... 186 3e-45
DQ023311_1(DQ023311|pid:none) Mus musculus dystonin isoform 2 mR... 184 1e-44
BC092177_1(BC092177|pid:none) Danio rerio spectrin alpha 2, mRNA... 183 3e-44
L40626_1(L40626|pid:none) Human ACF7 gene, partial cds. &S66292... 182 8e-44
BC150747_1(BC150747|pid:none) Mus musculus spectrin alpha 1, mRN... 181 2e-43
(P08032) RecName: Full=Spectrin alpha chain, erythrocyte; AltNam... 181 2e-43
AL353894_2(AL353894|pid:none) Human DNA sequence from clone RP11... 179 4e-43
AJ720670_1(AJ720670|pid:none) Gallus gallus partial mRNA for hyp... 178 8e-43
(P02549) RecName: Full=Spectrin alpha chain, erythrocyte; AltNam... 177 1e-42
M61826_1(M61826|pid:none) Human alpha-spectrin gene, exon 53. &... 176 3e-42
Z92788_8(Z92788|pid:none) Caenorhabditis elegans Cosmid F53B8, c... 173 3e-41
Z92788_6(Z92788|pid:none) Caenorhabditis elegans Cosmid F53B8, c... 173 3e-41
AL031637_4(AL031637|pid:none) Caenorhabditis elegans YAC Y47H9B,... 173 3e-41
AJ505816_1(AJ505816|pid:none) Caenorhabditis elegans mRNA for VA... 173 3e-41
AJ505815_1(AJ505815|pid:none) Caenorhabditis elegans mRNA for VA... 173 3e-41
AJ505903_1(AJ505903|pid:none) Caenorhabditis elegans mRNA for VA... 173 3e-41
AJ505905_1(AJ505905|pid:none) Caenorhabditis elegans mRNA for VA... 173 3e-41
(Q9Y0T4) RecName: Full=Cortexillin-1; AltName: Full=Cortexillin ... 169 4e-40
T22552(T22552;T27703)hypothetical protein ZK1151.1 - Caenorhabdi... 167 2e-39
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B... 166 3e-39
AF304204_1(AF304204|pid:none) Strongylocentrotus purpuratus dyst... 163 4e-38
AB171346_1(AB171346|pid:none) Macaca fascicularis brain cDNA clo... 161 1e-37
AJ002967_1(AJ002967|pid:none) Rattus norvegicus mRNA for utrophin. 161 1e-37
AK134424_1(AK134424|pid:none) Mus musculus 13 days embryo male t... 160 3e-37
EU293093_1(EU293093|pid:none) Synthetic construct murine micro u... 160 3e-37
BC050183_1(BC050183|pid:none) Mus musculus utrophin, mRNA (cDNA ... 160 3e-37
AX107972_1(AX107972|pid:none) Sequence 8 from Patent WO0125461. 158 9e-37
Y12229_1(Y12229|pid:none) M.musculus mRNA for utrophin. 157 2e-36
AY095485_1(AY095485|pid:none) Canis familiaris utrophin mRNA, co... 157 2e-36
AY183142_1(AY183142|pid:none) Homo sapiens spectrin-like protein... 155 1e-35
AL049548_2(AL049548|pid:none) Human DNA sequence from clone RP3-... 155 1e-35
(Q9UJ07) RecName: Full=Nesprin-1; AltName: Full=Nuclear envelope... 155 1e-35
AF038621_4(AF038621|pid:none) Caenorhabditis elegans cosmid M116... 154 2e-35
AY238342_1(AY238342|pid:none) Rattus norvegicus erythroid spectr... 152 5e-35
Z92788_2(Z92788|pid:none) Caenorhabditis elegans Cosmid F53B8, c... 152 5e-35
A63605_1(A63605|pid:none) Sequence 7 from Patent WO9722696. 152 8e-35
AK295175_1(AK295175|pid:none) Homo sapiens cDNA FLJ54432 complet... 150 2e-34
AL031542_1(AL031542|pid:none) Human DNA sequence from clone RP5-... 149 4e-34
AL031542_3(AL031542|pid:none) Human DNA sequence from clone RP5-... 149 4e-34
(P11532) RecName: Full=Dystrophin; 149 4e-34
AL031542_2(AL031542|pid:none) Human DNA sequence from clone RP5-... 149 4e-34
AF435011_1(AF435011|pid:none) Homo sapiens NUANCE (NUA) mRNA, co... 149 5e-34
(Q8WXH1) RecName: Full=Nesprin-2; AltName: Full=Nuclear envelope... 149 5e-34
AF495911_1(AF495911|pid:none) Homo sapiens nesprin-2 mRNA, compl... 149 5e-34
A32612(A32612) spectrin alpha chain, nonerythroid - rat (fragmen... 147 2e-33
(P11533) RecName: Full=Dystrophin; &S02041(S02041;S02013;S71487... 147 3e-33
AK295864_1(AK295864|pid:none) Homo sapiens cDNA FLJ54409 complet... 145 1e-32
(P11531) RecName: Full=Dystrophin; &S28916(S28916;B27162;S10922... 144 1e-32
BC009242_1(BC009242|pid:none) Homo sapiens dystrophin, mRNA (cDN... 143 3e-32
(Q5GN48) RecName: Full=Dystrophin; &AJ865385_1(AJ865385|pid:none) 142 5e-32
BC127124_1(BC127124|pid:none) Homo sapiens actinin, alpha 1, mRN... 142 7e-32
AK039486_1(AK039486|pid:none) Mus musculus adult male spinal cor... 141 1e-31
FN392319_1035(FN392319|pid:none) Pichia pastoris GS115 chromosom... 141 1e-31
CR858564_1(CR858564|pid:none) Pongo abelii mRNA; cDNA DKFZp468A1... 141 1e-31
CR859459_1(CR859459|pid:none) Pongo abelii mRNA; cDNA DKFZp468E2... 141 1e-31
AK003570_1(AK003570|pid:none) Mus musculus 18-day embryo whole b... 140 3e-31
AE013599_1879(AE013599|pid:none) Drosophila melanogaster chromos... 137 2e-30
AE013599_1878(AE013599|pid:none) Drosophila melanogaster chromos... 137 2e-30
AF200422_1(AF200422|pid:none) Drosophila melanogaster Short stop... 137 2e-30
AK049602_1(AK049602|pid:none) Mus musculus 12 days embryo spinal... 135 8e-30
AK044459_1(AK044459|pid:none) Mus musculus adult retina cDNA, RI... 134 1e-29
AL954831_1(AL954831|pid:none) Zebrafish DNA sequence from clone ... 134 2e-29
AJ544618_1(AJ544618|pid:none) Takifugu rubripes utrn gene for pu... 134 2e-29
AK052521_1(AK052521|pid:none) Mus musculus 13 days embryo lung c... 133 3e-29
AK127519_1(AK127519|pid:none) Homo sapiens cDNA FLJ45612 fis, cl... 132 5e-29
AJ534876_1(AJ534876|pid:none) Salmo salar partial mRNA for alpha... 132 5e-29
T30849(T30849) actin binding protein ACF7, neural isoform 3 - mo... 132 9e-29
AK129419_1(AK129419|pid:none) Mus musculus mRNA for mKIAA1668 pr... 131 1e-28
(Q8BGT6) RecName: Full=MICAL-like protein 1; AltName: Full=Molec... 131 1e-28
(Q9UH45) RecName: Full=MICAL-like protein 1; AltName: Full=Molec... 131 2e-28
AF325341_1(AF325341|pid:none) Homo sapiens macrophin 1 isoforms ... 130 2e-28
AY382663_1(AY382663|pid:none) Hirudo medicinalis filamin mRNA, c... 130 2e-28
AK025226_1(AK025226|pid:none) Homo sapiens cDNA: FLJ21573 fis, c... 130 3e-28
AL117526_1(AL117526|pid:none) Homo sapiens mRNA; cDNA DKFZp434P1... 130 3e-28
(Q96JQ2) RecName: Full=Calmin; AltName: Full=Calponin-like trans... 130 3e-28
BC068482_1(BC068482|pid:none) Homo sapiens calmin (calponin-like... 130 3e-28
U70560_1(U70560|pid:none) Entamoeba histolytica actin binding pr... 128 1e-27
AF521597_1(AF521597|pid:none) Drosophila melanogaster MSP-300 (M... 128 1e-27
(Q8C5W0) RecName: Full=Calmin; AltName: Full=Calponin-like trans... 127 2e-27
AB059645_1(AB059645|pid:none) Mus musculus calmin isoform c mRNA... 127 2e-27
BC019176_1(BC019176|pid:none) Mus musculus calmin, mRNA (cDNA cl... 127 2e-27
CR942401_1(CR942401|pid:none) Xenopus tropicalis finished cDNA, ... 127 2e-27
AB047978_1(AB047978|pid:none) Mus musculus calmin isoform a mRNA... 127 2e-27
BC141280_1(BC141280|pid:none) Mus musculus calmin, mRNA (cDNA cl... 127 2e-27
FN357485_1(FN357485|pid:none) Schistosoma mansoni genome sequenc... 127 3e-27
AJ851773_1(AJ851773|pid:none) Gallus gallus mRNA for hypothetica... 126 4e-27
BC151024_1(BC151024|pid:none) Mus musculus filamin, alpha, mRNA ... 126 4e-27
AL807376_2(AL807376|pid:none) Mouse DNA sequence from clone RP23... 126 4e-27
AK089311_1(AK089311|pid:none) Mus musculus B6-derived CD11 +ve d... 126 4e-27
BC172825_1(BC172825|pid:none) Synthetic construct Mus musculus c... 126 4e-27
FJ416060_1(FJ416060|pid:none) Rattus norvegicus filamin alpha (F... 126 4e-27
AL807376_1(AL807376|pid:none) Mouse DNA sequence from clone RP23... 126 4e-27
AL807376_3(AL807376|pid:none) Mouse DNA sequence from clone RP23... 126 4e-27
(Q8BTM8) RecName: Full=Filamin-A; AltName: Full=Alpha-filamin; A... 126 4e-27
BC146098_1(BC146098|pid:none) Bos taurus MICAL-like 2, mRNA (cDN... 126 5e-27
AB191259_1(AB191259|pid:none) Homo sapiens FLNA mRNA for filamin... 125 6e-27
S36394(S36394;S36392)alpha-actinin 2, skeletal muscle splice for... 125 6e-27
(P21333) RecName: Full=Filamin-A; AltName: Full=Alpha-filamin; A... 125 6e-27
AB371577_1(AB371577|pid:none) Homo sapiens FLNA mRNA for filamin... 125 6e-27
BX664723_1(BX664723|pid:none) Human DNA sequence from clone WI2-... 125 6e-27
A37098(A37098;A35939;S37776;S37777;A54771;S12115) gelation facto... 125 6e-27
BC151097_1(BC151097|pid:none) Mus musculus filamin C, gamma, mRN... 124 1e-26
(Q8VHX6) RecName: Full=Filamin-C; AltName: Full=Gamma-filamin; A... 124 1e-26
BC158128_1(BC158128|pid:none) Mus musculus filamin C, gamma, mRN... 124 1e-26
AK304414_1(AK304414|pid:none) Homo sapiens cDNA FLJ52838 complet... 124 1e-26
(Q14315) RecName: Full=Filamin-C; AltName: Full=Gamma-filamin; A... 124 2e-26
AX781306_1(AX781306|pid:none) Sequence 7 from Patent WO03029827. 124 2e-26
AF100673_6(AF100673|pid:none) Caenorhabditis elegans cosmid Y66H... 123 3e-26
BC073402_1(BC073402|pid:none) Xenopus laevis MGC80860 protein, m... 123 4e-26
AF043045_1(AF043045|pid:none) Homo sapiens actin-binding protein... 122 5e-26
(Q9NRB5) RecName: Full=Filamin-B; Short=FLN-B; AltName:... 122 5e-26
A84513_1(A84513|pid:none) Sequence 128 from Patent WO9845704. &... 122 5e-26
BC121954_1(BC121954|pid:none) Xenopus tropicalis hypothetical pr... 122 7e-26
AB182579_1(AB182579|pid:none) Mus musculus mRNA for JRAB, comple... 121 2e-25
(Q80X90) RecName: Full=Filamin-B; Short=FLN-B; AltName:... 120 3e-25
AE014297_2391(AE014297|pid:none) Drosophila melanogaster chromos... 119 5e-25
AF174492_1(AF174492|pid:none) Drosophila melanogaster filamin1 m... 119 5e-25
AK074068_1(AK074068|pid:none) Homo sapiens mRNA for FLJ00139 pro... 119 6e-25
AE014297_2762(AE014297|pid:none) Drosophila melanogaster chromos... 119 6e-25
(Q9VDW4) RecName: Full=Dystrophin, isoforms A/C/F/G/H; ... 119 6e-25
AF297644_1(AF297644|pid:none) Drosophila melanogaster dystrophin... 119 6e-25
(Q8IY33) RecName: Full=MICAL-like protein 2; &BC037988_1(BC0379... 119 6e-25
AE014297_2767(AE014297|pid:none) Drosophila melanogaster chromos... 119 6e-25
AE014297_2765(AE014297|pid:none) Drosophila melanogaster chromos... 119 6e-25
AE014297_2766(AE014297|pid:none) Drosophila melanogaster chromos... 119 6e-25
AJ012737_1(AJ012737|pid:none) Homo sapiens mRNA for filamin, mus... 119 8e-25
AB023438_1(AB023438|pid:none) Gallus gallus mRNA for cgABP260 ac... 116 4e-24
AB056475_1(AB056475|pid:none) Gallus gallus mRNA for cgABP260, c... 116 4e-24
AB056474_1(AB056474|pid:none) Gallus gallus mRNA for filamin, co... 116 4e-24
EU832111_1(EU832111|pid:none) Synthetic construct Homo sapiens c... 115 9e-24
BC052767_1(BC052767|pid:none) Danio rerio zgc:55358, mRNA (cDNA ... 115 1e-23
AK302893_1(AK302893|pid:none) Homo sapiens cDNA FLJ58714 complet... 114 1e-23
AK302580_1(AK302580|pid:none) Homo sapiens cDNA FLJ58307 complet... 114 1e-23
AB110785_1(AB110785|pid:none) Homo sapiens MICAL2PV1 mRNA for fl... 114 1e-23
AB018293_1(AB018293|pid:none) Homo sapiens mRNA for KIAA0750 pro... 114 1e-23
(O94851) RecName: Full=Protein MICAL-2; &AB385380_1(AB385380|pi... 114 1e-23
AB110786_1(AB110786|pid:none) Homo sapiens MICAL2PV2 mRNA for fl... 114 1e-23
FN357555_14(FN357555|pid:none) Schistosoma mansoni genome sequen... 114 2e-23
AK294845_1(AK294845|pid:none) Homo sapiens cDNA FLJ61246 complet... 113 3e-23
BX538021_1(BX538021|pid:none) Homo sapiens mRNA; cDNA DKFZp686H2... 113 3e-23
A47213(A47213) beta-fodrin - human (fragment) &S65762_1(S65762|... 110 3e-22
Z92788_9(Z92788|pid:none) Caenorhabditis elegans Cosmid F53B8, c... 110 4e-22
AK086017_1(AK086017|pid:none) Mus musculus 16 days neonate heart... 110 4e-22
AL834373_1(AL834373|pid:none) Homo sapiens mRNA; cDNA DKFZp762G0... 109 6e-22
BC053828_1(BC053828|pid:none) Xenopus laevis cDNA clone IMAGE:68... 109 6e-22
M19725_1(M19725|pid:none) Human nonerythroid alpha-spectrin mRNA... 109 6e-22
S67765_1(S67765|pid:none) Drosophila melanogaster alpha-spectrin... 108 8e-22
BC059615_1(BC059615|pid:none) Danio rerio flavoprotein oxidoredu... 108 1e-21
AL929264_5(AL929264|pid:none) Zebrafish DNA sequence from clone ... 108 1e-21
AK122497_1(AK122497|pid:none) Mus musculus mRNA for mKIAA1364 pr... 108 1e-21
AK048201_1(AK048201|pid:none) Mus musculus 16 days embryo head c... 108 1e-21
AE014296_2365(AE014296|pid:none) Drosophila melanogaster chromos... 108 1e-21
AK132669_1(AK132669|pid:none) Mus musculus adult male testis cDN... 108 1e-21
BC138257_1(BC138257|pid:none) Mus musculus microtubule associate... 108 1e-21
BC057484_1(BC057484|pid:none) Danio rerio zgc:55983, mRNA (cDNA ... 107 2e-21
AB384532_1(AB384532|pid:none) Synthetic construct DNA, clone: pF... 106 5e-21
AB463198_1(AB463198|pid:none) Synthetic construct DNA, clone: pF... 106 5e-21
AK138935_1(AK138935|pid:none) Mus musculus adult male aorta and ... 106 5e-21
(Q7RTP6) RecName: Full=Protein MICAL-3; 106 5e-21
AK220353_1(AK220353|pid:none) Mus musculus mRNA for mKIAA0750 pr... 106 5e-21
(Q8BML1) RecName: Full=Protein MICAL-2; &AK030608_1(AK030608|pi... 106 5e-21
BC157876_1(BC157876|pid:none) Homo sapiens microtubule associate... 106 5e-21
AK220308_1(AK220308|pid:none) Mus musculus mRNA for mFLJ00139 pr... 105 9e-21
AE014298_935(AE014298|pid:none) Drosophila melanogaster chromoso... 104 2e-20
BT029983_1(BT029983|pid:none) Drosophila melanogaster IP18653 fu... 104 2e-20
AE014298_939(AE014298|pid:none) Drosophila melanogaster chromoso... 104 2e-20
CR855260_2(CR855260|pid:none) Zebrafish DNA sequence from clone ... 104 2e-20
AY811925_1(AY811925|pid:none) Schistosoma japonicum SJCHGC05267 ... 104 2e-20
AY816327_1(AY816327|pid:none) Homo sapiens structure protein NSP... 103 4e-20
AK301318_1(AK301318|pid:none) Homo sapiens cDNA FLJ50032 complet... 103 4e-20
BC021123_1(BC021123|pid:none) Homo sapiens cytospin B, mRNA (cDN... 103 4e-20
AK295811_1(AK295811|pid:none) Homo sapiens cDNA FLJ54411 complet... 103 4e-20
AK304186_1(AK304186|pid:none) Homo sapiens cDNA FLJ53275 complet... 103 4e-20
AK295093_1(AK295093|pid:none) Homo sapiens cDNA FLJ50011 complet... 103 4e-20
T15570(T15570)hypothetical protein C23F12.2 - Caenorhabditis ele... 102 8e-20
U39676_3(U39676|pid:none) Caenorhabditis elegans cosmid C23F12, ... 102 8e-20
(Q2KNA0) RecName: Full=Cytospin-A; AltName: Full=SPECC1-like pro... 102 1e-19
(Q2KNA1) RecName: Full=Cytospin-A; AltName: Full=SPECC1-like pro... 101 2e-19
BC136471_1(BC136471|pid:none) Homo sapiens cytospin A, mRNA (cDN... 101 2e-19
(Q5SXY1) RecName: Full=Sperm antigen with calponin homology and ... 100 3e-19
AL592080_3(AL592080|pid:none) Mouse DNA sequence from clone RP23... 100 3e-19
AE013599_3674(AE013599|pid:none) Drosophila melanogaster chromos... 100 3e-19
AL928675_1(AL928675|pid:none) Zebrafish DNA sequence from clone ... 100 4e-19
(Q2KN94) RecName: Full=Cytospin-A; AltName: Full=SPECC1-like pro... 100 4e-19
BC037464_1(BC037464|pid:none) Mus musculus cytospin A, mRNA (cDN... 100 4e-19
(Q2KN98) RecName: Full=Cytospin-A; AltName: Full=SPECC1-like pro... 100 4e-19
DQ463750_1(DQ463750|pid:none) Mus musculus BPAG1 isoform 3 mRNA,... 100 5e-19
(Q2KN96) RecName: Full=Cytospin-A; AltName: Full=SPECC1-like pro... 99 8e-19
BC128649_1(BC128649|pid:none) Xenopus tropicalis cytospin A, mRN... 99 8e-19
CR388031_2(CR388031|pid:none) Zebrafish DNA sequence from clone ... 98 1e-18
CR859773_1(CR859773|pid:none) Pongo abelii mRNA; cDNA DKFZp468D0... 97 3e-18
AK170516_1(AK170516|pid:none) Mus musculus NOD-derived CD11c +ve... 97 3e-18
AK030932_1(AK030932|pid:none) Mus musculus adult male thymus cDN... 97 3e-18
AK009426_1(AK009426|pid:none) Mus musculus adult male tongue cDN... 97 3e-18
AF064238_1(AF064238|pid:none) Homo sapiens smoothelin large isof... 97 4e-18
BC149154_1(BC149154|pid:none) Bos taurus smoothelin, mRNA (cDNA ... 97 4e-18
BC126838_1(BC126838|pid:none) Bos taurus smoothelin, mRNA (cDNA ... 97 4e-18
AK077023_1(AK077023|pid:none) Mus musculus adult male testis cDN... 97 4e-18
AC005005_3(AC005005|pid:none) Homo sapiens PAC clone RP3-412A9 f... 97 4e-18
AK295418_1(AK295418|pid:none) Homo sapiens cDNA FLJ56082 complet... 97 4e-18
AK128627_1(AK128627|pid:none) Homo sapiens cDNA FLJ46786 fis, cl... 97 4e-18
BC034237_1(BC034237|pid:none) Homo sapiens smoothelin, mRNA (cDN... 97 4e-18
AK301289_1(AK301289|pid:none) Homo sapiens cDNA FLJ52779 complet... 97 4e-18
AK095930_1(AK095930|pid:none) Homo sapiens cDNA FLJ38611 fis, cl... 97 4e-18
DQ894358_1(DQ894358|pid:none) Synthetic construct Homo sapiens c... 96 5e-18
AE013599_2535(AE013599|pid:none) Drosophila melanogaster chromos... 96 7e-18
AE014298_75(AE014298|pid:none) Drosophila melanogaster chromosom... 96 7e-18
AF181633_1(AF181633|pid:none) Drosophila melanogaster EG:118B3.2... 96 7e-18
AE013599_2536(AE013599|pid:none) Drosophila melanogaster chromos... 96 7e-18
AE013599_2537(AE013599|pid:none) Drosophila melanogaster chromos... 96 7e-18
AE013599_2539(AE013599|pid:none) Drosophila melanogaster chromos... 96 7e-18
X90560_1(X90560|pid:none) Physcomitrella patens mRNA for calmodu... 96 7e-18
S58314(S58314)calmodulin - moss (Physcomitrella patens) 96 9e-18
(Q9NWI9) RecName: Full=EH domain-binding protein 1; 96 9e-18
BC168420_1(BC168420|pid:none) Xenopus tropicalis cDNA clone MGC:... 96 9e-18
AY531390_1(AY531390|pid:none) Homo sapiens EH domain binding pro... 96 9e-18
BC094152_1(BC094152|pid:none) Xenopus laevis hypothetical protei... 95 1e-17
EZ000156_1(EZ000156|pid:none) TSA: Schistosoma japonicum SJCHGC0... 95 1e-17
FN357302_26(FN357302|pid:none) Schistosoma mansoni genome sequen... 95 2e-17
FN357302_25(FN357302|pid:none) Schistosoma mansoni genome sequen... 95 2e-17
AF132449_4(AF132449|pid:none) Mus musculus smoothelin gene, alte... 94 3e-17
AF064236_1(AF064236|pid:none) Mus musculus smoothelin large isof... 94 3e-17
CS559978_1(CS559978|pid:none) Sequence 565 from Patent WO2006032... 94 4e-17
AF104986_1(AF104986|pid:none) Magnaporthe grisea calmodulin (MgC... 94 4e-17
FN357544_8(FN357544|pid:none) Schistosoma mansoni genome sequenc... 94 4e-17
EU008747_1(EU008747|pid:none) Stachybotrys elegans clone Se4645 ... 93 5e-17
I50420(I50420) nonerythroid alpha-spectrin - chicken (fragment) ... 93 5e-17
AL669858_3(AL669858|pid:none) Mouse DNA sequence from clone RP23... 93 6e-17
EF083909_1(EF083909|pid:none) Picea sitchensis clone WS0283_D07 ... 93 6e-17
EF081899_1(EF081899|pid:none) Picea sitchensis clone WS02711_N09... 93 6e-17
X97558_1(X97558|pid:none) C.annuum mRNA for calmodulin-1. 93 6e-17
(Q69ZW3) RecName: Full=EH domain-binding protein 1; 93 6e-17
AC145330_23(AC145330|pid:none) Medicago truncatula clone mth2-17... 92 8e-17
CS560230_1(CS560230|pid:none) Sequence 817 from Patent WO2006032... 92 8e-17
(P60204) RecName: Full=Calmodulin; Short=CaM; &(P60205... 92 8e-17
S35185(S35185;S25133) calmodulin 4 - Arabidopsis thaliana &Z120... 92 8e-17
EF441522_1(EF441522|pid:none) Actinidia eriantha f. alba clone A... 92 1e-16
(P17928) RecName: Full=Calmodulin; Short=CaM; &AF03003... 92 1e-16
AY517933_1(AY517933|pid:none) Arachis hypogaea calmodulin (CaM1)... 92 1e-16
JC1033(JC1033)calmodulin - garden pea 92 1e-16
(Q2TAL5) RecName: Full=Smoothelin-like protein 2; &BC110859_1(B... 92 1e-16
AK124452_1(AK124452|pid:none) Homo sapiens cDNA FLJ42461 fis, cl... 92 1e-16
AF089808_1(AF089808|pid:none) Pyricularia grisea calmodulin gene... 92 1e-16
CS559996_1(CS559996|pid:none) Sequence 583 from Patent WO2006032... 92 1e-16
AF084394_1(AF084394|pid:none) Synthetic construct calmodulin mut... 92 1e-16
EF063123_1(EF063123|pid:none) Botryotinia fuckeliana strain BC4 ... 92 1e-16
AK152579_1(AK152579|pid:none) Mus musculus bone marrow macrophag... 92 1e-16
(Q7DMN9) RecName: Full=Calmodulin-5/6/7/8; Short=CaM-5/... 92 1e-16
AF084439_1(AF084439|pid:none) Synthetic construct calmodulin mut... 92 1e-16
AF084432_1(AF084432|pid:none) Synthetic construct calmodulin mut... 92 1e-16
AB211694_1(AB211694|pid:none) Cryptomeria japonica gene for puta... 92 1e-16
AF084418_1(AF084418|pid:none) Synthetic construct calmodulin mut... 92 1e-16
AY657030_1(AY657030|pid:none) Salvia miltiorrhiza calmodulin mRN... 92 1e-16
AF084392_1(AF084392|pid:none) Synthetic construct calmodulin mut... 91 2e-16
EF053035_1(EF053035|pid:none) Thlaspi caerulescens calmodulin (C... 91 2e-16
T07751(T07751) calmodulin 2 - tomato (fragment) &Y14765_1(Y1476... 91 2e-16
AL662812_1(AL662812|pid:none) Mouse DNA sequence from clone RP23... 91 2e-16
(P93087) RecName: Full=Calmodulin; Short=CaM; &AB05084... 91 2e-16
AJ851697_1(AJ851697|pid:none) Gallus gallus mRNA for hypothetica... 91 2e-16
BT084442_1(BT084442|pid:none) Zea mays full-length cDNA clone ZM... 91 2e-16
CS560116_1(CS560116|pid:none) Sequence 703 from Patent WO2006032... 91 2e-16
FB334965_1(FB334965|pid:none) Sequence 2491 from Patent WO200711... 91 2e-16
(P25069) RecName: Full=Calmodulin-2/3/5; Short=CaM-2/3/... 91 2e-16
FB335828_1(FB335828|pid:none) Sequence 3354 from Patent WO200711... 91 2e-16
EF441475_1(EF441475|pid:none) Actinidia sabiifolia clone A042 ca... 91 2e-16
CS560270_1(CS560270|pid:none) Sequence 857 from Patent WO2006032... 91 2e-16
AY656693_1(AY656693|pid:none) Daucus carota calmodulin cam-210 m... 91 2e-16
AY364011_1(AY364011|pid:none) Daucus carota calmodulin 4 mRNA, p... 91 2e-16
AF084410_1(AF084410|pid:none) Synthetic construct calmodulin mut... 91 2e-16
AJ843113_1(AJ843113|pid:none) Quercus petraea mRNA for calmoduli... 91 2e-16
MCSP(A03024)calmodulin - spinach (tentative sequence) 91 2e-16
AY275526_1(AY275526|pid:none) Pyrus communis calmodulin mRNA, pa... 91 2e-16
AY656686_1(AY656686|pid:none) Daucus carota calmodulin cam-203 m... 91 2e-16
(P59220) RecName: Full=Calmodulin-7; Short=CaM-7; &(P6... 91 2e-16
AF084442_1(AF084442|pid:none) Synthetic construct calmodulin mut... 91 2e-16
EF441503_1(EF441503|pid:none) Actinidia deliciosa var. deliciosa... 91 2e-16
(Q2KI85) RecName: Full=Smoothelin-like protein 2; &BC112730_1(B... 91 2e-16
EF441484_1(EF441484|pid:none) Clematoclethra scandens subsp. tom... 91 2e-16
(P27161) RecName: Full=Calmodulin; Short=CaM; &AB05083... 91 2e-16
L14071_1(L14071|pid:none) Bryonia dioica calmodulin (Bc329) mRNA... 91 2e-16
AF468661_1(AF468661|pid:none) Stevia rebaudiana calmodulin mRNA,... 91 2e-16
AF083238_1(AF083238|pid:none) Synthetic calmodulin mutant SYNCAM... 91 3e-16
EF441489_1(EF441489|pid:none) Actinidia kolomikta clone A018 cal... 91 3e-16
AF084406_1(AF084406|pid:none) Synthetic construct calmodulin mut... 91 3e-16
AF084426_1(AF084426|pid:none) Synthetic construct calmodulin mut... 91 3e-16
M11334_1(M11334|pid:none) Synthetic construct VU1 calmodulin gen... 91 3e-16
AF084424_1(AF084424|pid:none) Synthetic construct calmodulin mut... 91 3e-16
AF084412_1(AF084412|pid:none) Synthetic construct calmodulin mut... 91 3e-16
CS560054_1(CS560054|pid:none) Sequence 641 from Patent WO2006032... 91 3e-16
EF441486_1(EF441486|pid:none) Actinidia sabiifolia clone H043 ca... 91 3e-16
CS559658_1(CS559658|pid:none) Sequence 245 from Patent WO2006032... 91 3e-16
(Q39752) RecName: Full=Calmodulin; Short=CaM; &X97612_... 91 3e-16
DQ398935_1(DQ398935|pid:none) Vigna unguiculata calmodulin mRNA,... 91 3e-16
EF441470_1(EF441470|pid:none) Actinidia deliciosa var. chlorocar... 91 3e-16
(O97341) RecName: Full=Calmodulin; Short=CaM; &Y18166_... 91 3e-16
AF084399_1(AF084399|pid:none) Synthetic construct calmodulin mut... 91 3e-16
AF084435_1(AF084435|pid:none) Synthetic construct calmodulin mut... 91 3e-16
AF084413_1(AF084413|pid:none) Synthetic construct calmodulin mut... 91 3e-16
AF084416_1(AF084416|pid:none) Synthetic construct calmodulin mut... 91 3e-16
CS559900_1(CS559900|pid:none) Sequence 487 from Patent WO2006032... 91 3e-16
EF441488_1(EF441488|pid:none) Actinidia melliana clone KH47 calm... 91 3e-16
EF441485_1(EF441485|pid:none) Actinidia sabiifolia clone A085 ca... 91 3e-16
BC090828_1(BC090828|pid:none) Danio rerio smoothelin, like, mRNA... 90 4e-16
AF084405_1(AF084405|pid:none) Synthetic construct calmodulin mut... 90 4e-16
>FADOAA(S00103;A29006) alpha-actinin - slime mold (Dictyostelium
discoideum) &Y00689_1(Y00689|pid:none)
Length = 862
Score = 1580 bits (4092), Expect = 0.0
Identities = 811/835 (97%), Positives = 812/835 (97%), Gaps = 1/835 (0%)
Frame = +1
Query: 202 FTAWCNSHLRKLGSSIEQIDTDFTDGIKLAQLLEVISNDPVFKVNKTPKLR-IHNIQNVG 378
FTAWCNSHLRKLGSSIEQIDTDFTDGIKLAQLLEVISNDPVFKVNKTPKLR IHNIQNVG
Sbjct: 28 FTAWCNSHLRKLGSSIEQIDTDFTDGIKLAQLLEVISNDPVFKVNKTPKLRRIHNIQNVG 87
Query: 379 LCLKHIESHGVKLVGIGAEELVDKNLKMTLGMIWTIILRFAIQDISIEELSAKEALLLWC 558
LCLKHIESHGVKLVGIGAEELVDKNLKMTLGMIWTIILRFAIQDISIEELSAKEALLLWC
Sbjct: 88 LCLKHIESHGVKLVGIGAEELVDKNLKMTLGMIWTIILRFAIQDISIEELSAKEALLLWC 147
Query: 559 QRKTEGYDRVKVGNFHTSFQDGLAFCALIHKHRPDLINFDSLNKDDKAGNLQLAFDIAEK 738
QRKTEGYDRVKVGNFHTSFQDGLAFCALIHKHRPDLINFDSLNKDDKAGNLQLAFDIAEK
Sbjct: 148 QRKTEGYDRVKVGNFHTSFQDGLAFCALIHKHRPDLINFDSLNKDDKAGNLQLAFDIAEK 207
Query: 739 ELDIPKMLDVSDMLDVVRPDERSVMTYVAQYYHHFSASRKAETAGKQVGKVLDTFMLLEQ 918
ELDIPKMLDVSDMLDVVRPDERSVMTYVAQYYHHFSASRKAETAGKQVGKVLDTFMLLEQ
Sbjct: 208 ELDIPKMLDVSDMLDVVRPDERSVMTYVAQYYHHFSASRKAETAGKQVGKVLDTFMLLEQ 267
Query: 919 TKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSEL 1098
TKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSEL
Sbjct: 268 TKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSEL 327
Query: 1099 EAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAV 1278
EAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAV
Sbjct: 328 EAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAV 387
Query: 1279 LLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDL 1458
LLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDL
Sbjct: 388 LLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDL 447
Query: 1459 LSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDSLVE 1638
LSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDSLVE
Sbjct: 448 LSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDSLVE 507
Query: 1639 FAKRAAQLNVWIEAADDHVFDPINVDSVQGVQEIQEKFDAFLHDXXXXXXXXXXXXXXXX 1818
FAKRAAQLNVWIEAADDHVFDPINVDSVQGVQEIQEKFDAFLHD
Sbjct: 508 FAKRAAQLNVWIEAADDHVFDPINVDSVQGVQEIQEKFDAFLHDQSQQFAELEALAALTQ 567
Query: 1819 XXXXXGRSENDYSVISYDELSAKWNNLLAGIEERKVQLANELTTQTNNDVLCQSFSVKAN 1998
GRSENDYSVISYDELSAKWNNLLAGIEERKVQLANELTTQTNNDVLCQSFSVKAN
Sbjct: 568 QLRELGRSENDYSVISYDELSAKWNNLLAGIEERKVQLANELTTQTNNDVLCQSFSVKAN 627
Query: 1999 EISDYVRVTLDAISQNTSSDPQEQLNNIRAIITAHAEKKPELDELYTIASQLEEAQVVDN 2178
EISDYVRVTLDAISQNTSSDPQEQLNNIRAIITAHAEKKPELDELYTI SQLEEAQVVDN
Sbjct: 628 EISDYVRVTLDAISQNTSSDPQEQLNNIRAIITAHAEKKPELDELYTIRSQLEEAQVVDN 687
Query: 2179 KHTQHSLESIKLKWDKLNTLAKKNEQVVEGEILAKQLTGVTAEELSEFKACFSHFDKDND 2358
KHTQHSLES+KLKWDKLNTLAKKNEQVVEGEILAKQLTGVTAEELSEFKACFSHFDKDND
Sbjct: 688 KHTQHSLESLKLKWDKLNTLAKKNEQVVEGEILAKQLTGVTAEELSEFKACFSHFDKDND 747
Query: 2359 NKLNRLEFSSCLKSIGDELTEEQLNQVISKIDTDGNGTISFEEFIDYMVSSRKGTDSVES 2538
NKLNRLEFSSCLKSIGDELTEEQLNQVISKIDTDGNGTISFEEFIDYMVSSRKGTDSVES
Sbjct: 748 NKLNRLEFSSCLKSIGDELTEEQLNQVISKIDTDGNGTISFEEFIDYMVSSRKGTDSVES 807
Query: 2539 TKAAFKVMAEDKDFITEAQIRAAISDSKQIDYLLASMPAVEGGFDYNSFAEKLYQ 2703
TKAAFKVMAEDKDFITEAQIRAAISDSKQIDYLLASMPAVEGGFDYNSFAEKLYQ
Sbjct: 808 TKAAFKVMAEDKDFITEAQIRAAISDSKQIDYLLASMPAVEGGFDYNSFAEKLYQ 862
Score = 52.4 bits (124), Expect = 9e-05
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 123 SKKPXPVSGNDKQLLNKAWEITQKKNF 203
S++P PVSGNDKQLLNKAWEITQKK F
Sbjct: 2 SEEPTPVSGNDKQLLNKAWEITQKKTF 28
Lambda K H
0.316 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 4,118,571,181
Number of extensions: 78164269
Number of successful extensions: 242940
Number of sequences better than 10.0: 2845
Number of HSP's gapped: 239541
Number of HSP's successfully gapped: 4169
Length of query: 928
Length of database: 1,051,180,864
Length adjustment: 138
Effective length of query: 790
Effective length of database: 604,535,722
Effective search space: 477583220380
Effective search space used: 477583220380
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
23 |
| VF (FL, S) |
1 |
| AH (FL, L) |
2 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
2 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
1 |
| SF (FL, S) |
0 |
| CH (FL, L) |
3 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
1 |
| FC-IC (SUB) |
0 |