Contig-U15284-1
Contig ID Contig-U15284-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15284-1 (Contig-U15284-1Q) /CSM_Contig/Contig-U15284-1Q.Seq.d
TAATAATAATAACAATAGTAATTTGGTTGCAGTTGGTACTACTGGTGGTA
ATTTATATGTATTTAAAAAGAATGATGATGATATTAGTTCTAATGAAAAA
TTCAAATTAGAATGGAATTATAAAGCTCATCAACCAGTTGTTGGACCTCA
AGATTTAAAGTTTGGTTCAATAAATAAATTTGCTGAAATTTGGTCATTAA
CATTTCATCCAACTGATAATAGATTTATTGCAACATGTTCAGAGGATCAA
ACAACTGTAATTTGGAATAGAATCACTGGTGAAAAGGTTAAAACTTTAAT
TGGTCATACAACTGCTGTCACTTGTGTTGATTGGTTGACTTACAATAATG
AAAATGATAATGAAAAAGTTTACACAATTTTAGCAACATGTGCAGATGAT
CAAACTATTAGAATTTGGAATACTGATATTTGGGAAGAAATACTTGTTCT
AAATACAAATGATATTGGTGAATGGCATACAGTTACTTATATATCTTTAT
TAATAATAATAACAATAGTAATTTGGTTGCAGTTGGTACTACTGGTGGTA
ATTTATATGTATTTAAAAAGAATGATGATGATATTAGTTCTAATGAAAAA
TTCAAATTAGAATGGAATTATAAAGCTCATCAACCAGTTGTTGGACCTCA
AGATTTAAAGTTTGGTTCAATAAATAAATTTGCTGAAATTTGGTCATTAA
CATTTCATCCAACTGATAATAGATTTATTGCAACATGTTCAGAGGATCAA
ACAACTGTAATTTGGAATAGAATCACTGGTGAAAAGGTTAAAACTTTAAT
TGGTCATACAACTGCTGTCACTTGTGTTGATTGGTTGACTTACAATAATG
AAAATGATAATGAAAAAGTTTACACAATTTTAGCAACATGTGCAGATGAT
CAAACTATTAGAATTTGGAATACTGATATTTGGGAAGAAATACTTGTTCT
AAATACAAATGATATTGGTGAATGGCATACAGTTACTTATATATCTTTAA
TTGNACCNTCNTCATCATCNTCATCATCATCATCATCATCTTTATCTGCT
ACTTCCTCCTCATCCCCCNTAGTTGTTTGCGCAACNCAAAATGGTTGGGN
ATTCGTTTGGGATATTAAAAGTGGTTCNAAAGTTTATTCNAAAAGAGTTC
NTCTTGGTTCNATTGAAGGATTNCGTTGGAATAAATTTTCNAATAAAGTT
ATCTCTTGNTCNAGTGATTGNTTAATTCATGNATATGCATGTAAATNATT
AAAATATGNAAATNATAAAATTCTGNGCAAAAAAAAA

Gap no gap
Contig length 1287
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 166883
End point 167718
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U15284
List of clone(s)

est1=AFO139H,1,1000
est2=AFO139Z,939,1287
Translated Amino Acid sequence
****q**fgcswyyww*fici*ke***y*f**kiqirmel*ssstscwtsrfkvwfnk*i
c*nlvinissn***iycnmfrgsnncnle*nhw*kg*nfnwsyncchlc*lvdlq**k**
*kslhnfsnmcr*sny*nley*ylgrntcskyk*yw*MAYSYLYIFINNNNNSNLVAVGT
TGGNLYVFKKNDDDISSNEKFKLEWNYKAHQPVVGPQDLKFGSINKFAEIWSLTFHPTDN
RFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVYTILATCADD
QTIRIWNTDIWEEILVLNTNDIGEWHTVTYISLIXPSSSSSSSSSSSLSATSSSSPXVVC
ATQNGWXFVWDIKSGSKVYSKRVXLGSIEGXRWNKFSNKVISXSSDXLIHXYACKXLKYX
NXKILXKKK


Translated Amino Acid sequence (All Frames)
Frame A:
****q**fgcswyyww*fici*ke***y*f**kiqirmel*ssstscwtsrfkvwfnk*i
c*nlvinissn***iycnmfrgsnncnle*nhw*kg*nfnwsyncchlc*lvdlq**k**
*kslhnfsnmcr*sny*nley*ylgrntcskyk*yw*MAYSYLYIFINNNNNSNLVAVGT
TGGNLYVFKKNDDDISSNEKFKLEWNYKAHQPVVGPQDLKFGSINKFAEIWSLTFHPTDN
RFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVYTILATCADD
QTIRIWNTDIWEEILVLNTNDIGEWHTVTYISLIXPSSSSSSSSSSSLSATSSSSPXVVC
ATQNGWXFVWDIKSGSKVYSKRVXLGSIEGXRWNKFSNKVISXSSDXLIHXYACKXLKYX
NXKILXKKK


Frame B:
nnnnnsnlvavgttggnlyvfkkndddissnekfklewnykahqpvvgpqdlkfgsinkf
aeiwsltfhptdnrfiatcsedqttviwnritgekvktlighttavtcvdwltynnendn
ekvytilatcaddqtiriwntdiweeilvlntndigewhtvtyislliiitiviwlqlvl
lvviymylkrmmmilvlmknsn*ngiiklinqlldlki*slvq*inllkfgh*hfiqlii
dllqhvqrikql*fgieslvkrlkl*lviqllslvlig*ltimkmimkkftqf*qhvqmi
kllefgilifgkkylf*iqmilvngiqlliyl*lxxxhhxhhhhhhlylllpphpp*lfa
qxkmvgxsfgilkvvxkfixkefxlvxlkdxvginfxiklslxxvix*fmxmhvnx*nmx
xikfxakk


Frame C:
iiitiviwlqlvllvviymylkrmmmilvlmknsn*ngiiklinqlldlki*slvq*inl
lkfgh*hfiqliidllqhvqrikql*fgieslvkrlkl*lviqllslvlig*ltimkmim
kkftqf*qhvqmikllefgilifgkkylf*iqmilvngiqlliyly****q**fgcswyy
ww*fici*ke***y*f**kiqirmel*ssstscwtsrfkvwfnk*ic*nlvinissn***
iycnmfrgsnncnle*nhw*kg*nfnwsyncchlc*lvdlq**k***kslhnfsnmcr*s
ny*nley*ylgrntcskyk*yw*maysylyifnxtxxiixiiiiiificyfllipxsclr
nxkwlgirlgy*kwfxslfxkssswfx*rixle*ifx*syllxx*lxnsxicm*xikixk
x*nsxqkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15284-1 (Contig-U15284-1Q)
/CSM_Contig/Contig-U15284-1Q.Seq.d
(1287 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15284-1 (Contig-U15284-1Q) /CSM_Contig/Conti... 1990 0.0
Contig-U15744-1 (Contig-U15744-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U12446-1 (Contig-U12446-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U16709-1 (Contig-U16709-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U16708-1 (Contig-U16708-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U16556-1 (Contig-U16556-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U16107-1 (Contig-U16107-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U15594-1 (Contig-U15594-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U15513-1 (Contig-U15513-1Q) /CSM_Contig/Conti... 44 5e-04
Contig-U14159-1 (Contig-U14159-1Q) /CSM_Contig/Conti... 44 5e-04

>Contig-U15284-1 (Contig-U15284-1Q) /CSM_Contig/Contig-U15284-1Q.Seq.d
Length = 1287

Score = 1990 bits (1004), Expect = 0.0
Identities = 1007/1007 (100%)
Strand = Plus / Plus


Query: 1 taataataataacaatagtaatttggttgcagttggtactactggtggtaatttatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taataataataacaatagtaatttggttgcagttggtactactggtggtaatttatatgt 60


Query: 61 atttaaaaagaatgatgatgatattagttctaatgaaaaattcaaattagaatggaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttaaaaagaatgatgatgatattagttctaatgaaaaattcaaattagaatggaatta 120


Query: 121 taaagctcatcaaccagttgttggacctcaagatttaaagtttggttcaataaataaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaagctcatcaaccagttgttggacctcaagatttaaagtttggttcaataaataaatt 180


Query: 181 tgctgaaatttggtcattaacatttcatccaactgataatagatttattgcaacatgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgctgaaatttggtcattaacatttcatccaactgataatagatttattgcaacatgttc 240


Query: 241 agaggatcaaacaactgtaatttggaatagaatcactggtgaaaaggttaaaactttaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaggatcaaacaactgtaatttggaatagaatcactggtgaaaaggttaaaactttaat 300


Query: 301 tggtcatacaactgctgtcacttgtgttgattggttgacttacaataatgaaaatgataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggtcatacaactgctgtcacttgtgttgattggttgacttacaataatgaaaatgataa 360


Query: 361 tgaaaaagtttacacaattttagcaacatgtgcagatgatcaaactattagaatttggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaaaaagtttacacaattttagcaacatgtgcagatgatcaaactattagaatttggaa 420


Query: 421 tactgatatttgggaagaaatacttgttctaaatacaaatgatattggtgaatggcatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tactgatatttgggaagaaatacttgttctaaatacaaatgatattggtgaatggcatac 480


Query: 481 agttacttatatatctttattaataataataacaatagtaatttggttgcagttggtact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agttacttatatatctttattaataataataacaatagtaatttggttgcagttggtact 540


Query: 541 actggtggtaatttatatgtatttaaaaagaatgatgatgatattagttctaatgaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actggtggtaatttatatgtatttaaaaagaatgatgatgatattagttctaatgaaaaa 600


Query: 601 ttcaaattagaatggaattataaagctcatcaaccagttgttggacctcaagatttaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcaaattagaatggaattataaagctcatcaaccagttgttggacctcaagatttaaag 660


Query: 661 tttggttcaataaataaatttgctgaaatttggtcattaacatttcatccaactgataat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttggttcaataaataaatttgctgaaatttggtcattaacatttcatccaactgataat 720


Query: 721 agatttattgcaacatgttcagaggatcaaacaactgtaatttggaatagaatcactggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agatttattgcaacatgttcagaggatcaaacaactgtaatttggaatagaatcactggt 780


Query: 781 gaaaaggttaaaactttaattggtcatacaactgctgtcacttgtgttgattggttgact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaaaaggttaaaactttaattggtcatacaactgctgtcacttgtgttgattggttgact 840


Query: 841 tacaataatgaaaatgataatgaaaaagtttacacaattttagcaacatgtgcagatgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tacaataatgaaaatgataatgaaaaagtttacacaattttagcaacatgtgcagatgat 900


Query: 901 caaactattagaatttggaatactgatatttgggaagaaatacttgttctaaatacaaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 caaactattagaatttggaatactgatatttgggaagaaatacttgttctaaatacaaat 960


Query: 961 gatattggtgaatggcatacagttacttatatatctttaattgnacc 1007
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gatattggtgaatggcatacagttacttatatatctttaattgnacc 1007


Score = 371 bits (187), Expect = e-102
Identities = 235/235 (100%)
Strand = Plus / Plus


Query: 1041 tttatctgctacttcctcctcatcccccntagttgtttgcgcaacncaaaatggttgggn 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 tttatctgctacttcctcctcatcccccntagttgtttgcgcaacncaaaatggttgggn 1100


Query: 1101 attcgtttgggatattaaaagtggttcnaaagtttattcnaaaagagttcntcttggttc 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 attcgtttgggatattaaaagtggttcnaaagtttattcnaaaagagttcntcttggttc 1160


Query: 1161 nattgaaggattncgttggaataaattttcnaataaagttatctcttgntcnagtgattg 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 nattgaaggattncgttggaataaattttcnaataaagttatctcttgntcnagtgattg 1220


Query: 1221 nttaattcatgnatatgcatgtaaatnattaaaatatgnaaatnataaaattctg 1275
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 nttaattcatgnatatgcatgtaaatnattaaaatatgnaaatnataaaattctg 1275


>Contig-U15744-1 (Contig-U15744-1Q) /CSM_Contig/Contig-U15744-1Q.Seq.d
Length = 3275

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 501 taataataataacaatagtaatt 523
|||||||||||||||||||||||
Sbjct: 1995 taataataataacaatagtaatt 2017


Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1 taataataataacaatagtaatt 23
|||||||||||||||||||||||
Sbjct: 1995 taataataataacaatagtaatt 2017


Score = 34.2 bits (17), Expect = 0.51
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 498 tattaataataataacaatagtaat 522
||||||||||||||| |||| ||||
Sbjct: 1920 tattaataataataataataataat 1944


>Contig-U12446-1 (Contig-U12446-1Q) /CSM_Contig/Contig-U12446-1Q.Seq.d
Length = 399

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 501 taataataataacaatagtaatt 523
|||||||||||||||||||||||
Sbjct: 311 taataataataacaatagtaatt 333


Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1 taataataataacaatagtaatt 23
|||||||||||||||||||||||
Sbjct: 311 taataataataacaatagtaatt 333


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 68,742
Number of Sequences: 8402
Number of extensions: 68742
Number of successful extensions: 19564
Number of sequences better than 10.0: 1092
length of query: 1287
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1271
effective length of database: 7,941,110
effective search space: 10093150810
effective search space used: 10093150810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.18
Homology vs DNA
Query= Contig-U15284-1 (Contig-U15284-1Q) /CSM_Contig/Contig-U15284-1Q.Seq.d
(1287 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ345894) Dictyostelium discoideum cDNA clone:dda29m09, 3' ... 371 e-120 2
(AM431985) Vitis vinifera contig VV78X209301.4, whole genome... 36 6e-07 5
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 48 9e-07 5
(FE113852) LV_HC_RA059H23f Litopenaeus vannamei hemocyte cDN... 38 3e-06 4
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 40 4e-06 9
(FE055719) LV_ES_RA23I12r Litopenaeus vannamei eyestalk cDNA... 32 8e-06 5
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 46 9e-06 5
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 42 9e-06 11
(AL844509) Plasmodium falciparum chromosome 13. 42 2e-05 10
(EB799637) 5205719 ZF02 Danio rerio cDNA clone 2228783, mRNA... 36 2e-05 4
(FE119645) LV_HC_RA070I20f Litopenaeus vannamei hemocyte cDN... 38 2e-05 4
(EY366526) CAXA10776.rev CAXA Helobdella robusta Subtracted ... 44 2e-05 2
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 48 2e-05 3
(CU861478) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 3e-05 3
(BM294027) jh_50615.z1 Penaeus chinensis' cephalothorax cDNA... 34 3e-05 5
(FE744534) CAYC2386.g1 CAYC Petrolisthes cinctipes heart, ne... 44 9e-05 2
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 1e-04 9
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 44 1e-04 5
(AC179380) Strongylocentrotus purpuratus clone R3-59O6, WORK... 40 1e-04 5
(AL031745) Plasmodium falciparum DNA from MAL1P2. 46 1e-04 7
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 46 1e-04 6
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 36 1e-04 6
(CU469585) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 2e-04 3
(AL844506) Plasmodium falciparum chromosome 7. 46 2e-04 8
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 40 2e-04 11
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 38 3e-04 11
(BX236367) Danio rerio genomic clone DKEY-277E8, genomic sur... 36 3e-04 3
(CT663961) Danio rerio EST, clone ZF_mu_5m23 5'. 44 4e-04 2
(EK085111) 1092961138873 Global-Ocean-Sampling_GS-31-01-01-1... 46 4e-04 2
(EK015943) 1092955234357 Global-Ocean-Sampling_GS-31-01-01-1... 46 4e-04 2
(EJ692054) 1092956006110 Global-Ocean-Sampling_GS-30-02-01-1... 46 4e-04 2
(EJ662413) 1092955029220 Global-Ocean-Sampling_GS-30-02-01-1... 46 4e-04 2
(AM476456) Vitis vinifera contig VV78X063816.1, whole genome... 40 5e-04 3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 42 5e-04 5
(BJ377830) Dictyostelium discoideum cDNA clone:ddc26i02, 3' ... 38 6e-04 3
(DW405293) ES-N-S03-0113-W Penaeus monodon Eyestalk cDNA lib... 36 6e-04 3
(AC176355) Strongylocentrotus purpuratus clone R3-3053B7, WO... 44 7e-04 3
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 38 7e-04 6
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 36 7e-04 9
(AL844507) Plasmodium falciparum chromosome 8. 44 8e-04 10
(EY499488) CBBP4715.rev CBBP Hirudo medicinalis hermaphrodit... 36 9e-04 3
(ED237715) AUAC-aae83c03.g1 Ascaris suum whole genome shotgu... 36 9e-04 3
(AE014827) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 0.001 9
(FE098420) LV_HC_RA016G01r Litopenaeus vannamei hemocyte cDN... 44 0.001 3
(CU694255) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.001 5
(BJ366607) Dictyostelium discoideum cDNA clone:ddc39h18, 5' ... 44 0.001 2
(EC853652) HDE00001341 Hyperamoeba dachnaya Non-normalized (... 42 0.001 3
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 44 0.001 6
(BG901851) jh_8960.z1 Penaeus chinensis' cephalothorax cDNA ... 42 0.001 3
(CX301381) C08009A12SK PhyRootSr1 Citrus aurantium cDNA clon... 44 0.001 2
(AU266115) Dictyostelium discoideum vegetative cDNA clone:VS... 36 0.001 3
(BJ446028) Dictyostelium discoideum cDNA clone:ddv61m08, 3' ... 44 0.001 2
(EU146118) Cryptosporidium hominis isolate 10963 47 kDa prot... 36 0.001 3
(CK698028) ZF101-P00078-DEPE-F2_C08 GISZF001_ra Danio rerio ... 44 0.001 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 42 0.001 4
(U66912) Dictyostelium discoideum ORF DG1016 gene, partial cds. 42 0.001 3
(BX511108) Zebrafish DNA sequence from clone DKEY-18F15 in l... 38 0.001 8
(DY542504) HPO-N-S01-0394-LF Hematopoietic cDNA library Pena... 36 0.002 3
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 42 0.002 7
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 36 0.002 11
(BJ427142) Dictyostelium discoideum cDNA clone:ddv61m08, 5' ... 44 0.002 2
(EB938038) 9645023 ZF34 Danio rerio cDNA clone 3413789, mRNA... 44 0.002 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 44 0.002 7
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 34 0.002 11
(AC180269) Strongylocentrotus purpuratus clone R3-3123J22, W... 36 0.002 6
(DJ303905) Method for identification of useful proteins deri... 46 0.002 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 44 0.002 4
(BJ389814) Dictyostelium discoideum cDNA clone:dds20m03, 5' ... 38 0.002 4
(AF474345) Dictyostelium discoideum ABC transporter ABCC.13 ... 42 0.002 3
(AP001902) Homo sapiens genomic DNA, chromosome 18q22 clone:... 44 0.002 7
(AM443387) Vitis vinifera contig VV78X044743.5, whole genome... 44 0.002 3
(AC181897) Strongylocentrotus purpuratus clone R3-1016C08, W... 42 0.002 7
(AE014848) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.003 9
(AC181426) Strongylocentrotus purpuratus clone R3-1112A16, W... 38 0.003 5
(AJ851236) Plasmodium falciparum partial gene for DNA polyme... 42 0.003 2
(EY370567) CAXA12983.fwd CAXA Helobdella robusta Subtracted ... 36 0.003 3
(AC184621) Strongylocentrotus purpuratus clone R3-3074E13, W... 44 0.003 7
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 38 0.003 8
(FE145281) LV_HP_RA49M07f Litopenaeus vannamei hepatopancrea... 36 0.004 4
(AE001403) Plasmodium falciparum 3D7 chromosome 2 section 40... 34 0.004 6
(AM478748) Vitis vinifera contig VV78X080079.5, whole genome... 36 0.004 4
(CF348501) AGENCOURT_15225903 NIH_ZGC_10 Danio rerio cDNA cl... 44 0.005 2
(EK418384) 1095515484200 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.005 2
(DN791606) 91000865 Sea Urchin primary mesenchyme cell cDNA ... 40 0.005 3
(FI071341) CHO_OF7323xd13f1.ab1 CHO_OF7 Nicotiana tabacum ge... 44 0.005 2
(DJ209386) Method for identification of useful proteins deri... 46 0.005 2
(DQ503419) Plasmodium mexicanum clone Pmx839 microsatellite ... 36 0.005 3
(EY367171) CAXA11114.rev CAXA Helobdella robusta Subtracted ... 44 0.005 2
(CR354553) Zebrafish DNA sequence from clone CH211-158N6 in ... 36 0.005 5
(DU910166) 331769 Tomato EcoRI BAC Library Solanum lycopersi... 44 0.006 2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 38 0.006 7
(EE697032) AGENCOURT_89057286 NIH_ZGC_27 Danio rerio cDNA cl... 44 0.006 2
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.006 12
(AM472042) Vitis vinifera contig VV78X186988.18, whole genom... 44 0.006 3
(AC178886) Strongylocentrotus purpuratus clone R3-27K10, WOR... 38 0.006 6
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 44 0.006 7
(C25568) Dictyostelium discoideum slug cDNA, clone SLA445. 44 0.006 2
(AM433625) Vitis vinifera contig VV78X134482.6, whole genome... 42 0.007 2
(BM169231) EST571754 PyBS Plasmodium yoelii yoelii cDNA clon... 44 0.007 2
(CC187627) CH261-33L5_Sp6.1 CH261 Gallus gallus genomic clon... 40 0.007 2

>(BJ345894) Dictyostelium discoideum cDNA clone:dda29m09, 3' end,
single read.
Length = 349

Score = 371 bits (187), Expect(2) = e-120
Identities = 235/235 (100%)
Strand = Plus / Minus


Query: 1041 tttatctgctacttcctcctcatcccccntagttgtttgcgcaacncaaaatggttgggn 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttatctgctacttcctcctcatcccccntagttgtttgcgcaacncaaaatggttgggn 188


Query: 1101 attcgtttgggatattaaaagtggttcnaaagtttattcnaaaagagttcntcttggttc 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 attcgtttgggatattaaaagtggttcnaaagtttattcnaaaagagttcntcttggttc 128


Query: 1161 nattgaaggattncgttggaataaattttcnaataaagttatctcttgntcnagtgattg 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 nattgaaggattncgttggaataaattttcnaataaagttatctcttgntcnagtgattg 68


Query: 1221 nttaattcatgnatatgcatgtaaatnattaaaatatgnaaatnataaaattctg 1275
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 nttaattcatgnatatgcatgtaaatnattaaaatatgnaaatnataaaattctg 13

Score = 93.7 bits (47), Expect(2) = e-120
Identities = 60/65 (92%)
Strand = Plus / Minus


Query: 943 cttgttctaaatacaaatgatattggtgaatggcatacagttacttatatatctttaatt 1002
|||||||| ||||| ||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 345 cttgttctnaatacnaatgatattggtgaatggcatncagttacttatatntcnttaatt 286


Query: 1003 gnacc 1007
|||||
Sbjct: 285 gnacc 281

Score = 83.8 bits (42), Expect = 2e-11
Identities = 52/57 (91%)
Strand = Plus / Minus


Query: 443 cttgttctaaatacaaatgatattggtgaatggcatacagttacttatatatcttta 499
|||||||| ||||| ||||||||||||||||||||| ||||||||||||| || |||
Sbjct: 345 cttgttctnaatacnaatgatattggtgaatggcatncagttacttatatntcntta 289

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,591,322,191
Number of extensions: 118453019
Number of successful extensions: 13147110
Number of sequences better than 10.0: 2708
Length of query: 1287
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1263
Effective length of database: 100,704,341,533
Effective search space: 127189583356179
Effective search space used: 127189583356179
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.15
Homology vs Protein
Query= Contig-U15284-1 (Contig-U15284-1Q) /CSM_Contig/Contig-U15284-1Q.Seq.d
(1287 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 49 2e-12
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 49 9e-12
CT005245_3(CT005245|pid:none) Leishmania major strain Friedlin, ... 48 1e-10
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 53 4e-10
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 60 2e-07
AB006703_1(AB006703|pid:none) Arabidopsis thaliana genomic DNA, ... 59 4e-07
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 57 1e-06
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 57 2e-06
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 56 2e-06
(Q2UGU1) RecName: Full=Nuclear distribution protein nudF homolog; 55 5e-06
(Q7RY30) RecName: Full=Nuclear distribution protein pac-1a; AltN... 55 5e-06
AP007157_632(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 55 5e-06
CU640366_1076(CU640366|pid:none) Podospora anserina genomic DNA ... 55 7e-06
CP001323_449(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 55 7e-06
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 55 7e-06
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 54 9e-06
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 54 9e-06
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 54 1e-05
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 54 2e-05
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 54 2e-05
(Q8I0F4) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Dd... 54 2e-05
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 53 2e-05
AE010299_2454(AE010299|pid:none) Methanosarcina acetivorans str.... 53 2e-05
FN357317_20(FN357317|pid:none) Schistosoma mansoni genome sequen... 53 2e-05
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 53 2e-05
AL592382_2(AL592382|pid:none) Pneumocystis carinii telomeric cos... 53 2e-05
AB007645_4(AB007645|pid:none) Arabidopsis thaliana genomic DNA, ... 53 3e-05
EF560718_1(EF560718|pid:none) Homo sapiens clone DKFZp781B1145 A... 52 4e-05
AJ243007_1(AJ243007|pid:none) Homo sapiens mRNA for apoptotic pr... 52 4e-05
AJ243008_1(AJ243008|pid:none) Homo sapiens mRNA for apoptotic pr... 52 4e-05
AJ243107_1(AJ243107|pid:none) Homo sapiens mRNA for apoptotic pr... 52 4e-05
AB007873_1(AB007873|pid:none) Homo sapiens KIAA0413 mRNA, partia... 52 4e-05
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 52 4e-05
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 52 4e-05
AE014188_94(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 52 4e-05
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 52 4e-05
AJ243006_1(AJ243006|pid:none) Homo sapiens mRNA for apoptotic pr... 52 4e-05
AY738481_1(AY738481|pid:none) Gemmata sp. Wa1-1 putative serine/... 52 5e-05
AJ575934_4(AJ575934|pid:none) Micromonospora purpurea DOS biosyn... 52 5e-05
AJ628149_32(AJ628149|pid:none) Micromonospora echinospora genomi... 52 5e-05
CU633438_311(CU633438|pid:none) Podospora anserina genomic DNA c... 52 5e-05
CU633438_612(CU633438|pid:none) Podospora anserina genomic DNA c... 52 5e-05
AP008216_790(AP008216|pid:none) Oryza sativa (japonica cultivar-... 52 5e-05
AK072090_1(AK072090|pid:none) Oryza sativa Japonica Group cDNA c... 52 5e-05
AY738508_1(AY738508|pid:none) Gemmata sp. Wa1-1 WD-repeat protei... 52 5e-05
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 52 5e-05
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 52 5e-05
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 52 5e-05
BX294026_14(BX294026|pid:none) Neurospora crassa DNA linkage gro... 52 5e-05
(Q7S7L4) RecName: Full=Nuclear distribution protein pac-1b; AltN... 52 5e-05
CU633895_374(CU633895|pid:none) Podospora anserina genomic DNA c... 40 6e-05
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 52 6e-05
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 52 6e-05
(O42611) RecName: Full=Protein HIRA; AltName: Full=TUP1-like enh... 52 6e-05
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 51 8e-05
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 51 8e-05
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 51 8e-05
BC031471_1(BC031471|pid:none) Homo sapiens WD repeat domain 26, ... 51 1e-04
BC058601_1(BC058601|pid:none) Mus musculus WD repeat domain 26, ... 51 1e-04
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 51 1e-04
AB209887_1(AB209887|pid:none) Homo sapiens mRNA for WD repeat do... 51 1e-04
AK167017_1(AK167017|pid:none) Mus musculus blastocyst blastocyst... 51 1e-04
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 51 1e-04
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 51 1e-04
BC063817_1(BC063817|pid:none) Homo sapiens WD repeat domain 26, ... 51 1e-04
AK024669_1(AK024669|pid:none) Homo sapiens cDNA: FLJ21016 fis, c... 51 1e-04
EF676695_1(EF676695|pid:none) Picea sitchensis clone WS02748_G16... 51 1e-04
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 51 1e-04
(Q28D01) RecName: Full=WD repeat-containing protein 26; 51 1e-04
CR855782_1(CR855782|pid:none) Xenopus tropicalis finished cDNA, ... 51 1e-04
BC130197_1(BC130197|pid:none) Xenopus laevis hypothetical protei... 51 1e-04
BC109897_1(BC109897|pid:none) Bos taurus WD repeat domain 26, mR... 51 1e-04
CP001097_2083(CP001097|pid:none) Chlorobium limicola DSM 245, co... 51 1e-04
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 51 1e-04
AK075743_1(AK075743|pid:none) Mus musculus adult female placenta... 51 1e-04
AK299230_1(AK299230|pid:none) Homo sapiens cDNA FLJ56418 complet... 51 1e-04
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 50 1e-04
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 50 1e-04
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 50 1e-04
(Q7K0L4) RecName: Full=WD repeat-containing protein 26 homolog; ... 50 1e-04
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 50 1e-04
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 50 1e-04
AM920437_204(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 50 1e-04
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 50 2e-04
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 50 2e-04
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 50 2e-04
CP000108_212(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 50 2e-04
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 50 2e-04
(Q6H8D5) RecName: Full=Coatomer subunit beta'-2; AltName: Full=B... 50 2e-04
AF071881_1(AF071881|pid:none) Drosophila melanogaster Hira isofo... 50 2e-04
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 50 2e-04
EF576495_1(EF576495|pid:none) Oryza sativa (indica cultivar-grou... 50 2e-04
(Q4WLM7) RecName: Full=Nuclear distribution protein nudF homolog; 50 2e-04
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 49 3e-04
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 49 3e-04
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 49 3e-04
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 49 3e-04
BC160602_1(BC160602|pid:none) Danio rerio si:ch211-153j24.6, mRN... 49 3e-04
CR940353_254(CR940353|pid:none) Theileria annulata strain Ankara... 49 3e-04
(Q5SP67) RecName: Full=WD repeat-containing protein 26; &AL9294... 49 3e-04
BT016167_1(BT016167|pid:none) Drosophila melanogaster AT04626 fu... 49 4e-04
DQ340808_1(DQ340808|pid:none) Carassius auratus HIRA mRNA, compl... 49 4e-04
AB209790_1(AB209790|pid:none) Homo sapiens mRNA for angio-associ... 49 4e-04
CP000099_2768(CP000099|pid:none) Methanosarcina barkeri str. Fus... 49 4e-04
(Q8QFR2) RecName: Full=Protein HIRA; &BC078007_1(BC078007|pid:n... 49 4e-04
BC014122_1(BC014122|pid:none) Homo sapiens cDNA clone MGC:20699 ... 49 4e-04
AY069414_1(AY069414|pid:none) Drosophila melanogaster LD11036 fu... 49 4e-04
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 49 4e-04
(Q3SZK1) RecName: Full=Angio-associated migratory cell protein; ... 49 4e-04
CR774200_6(CR774200|pid:none) Zebrafish DNA sequence from clone ... 49 4e-04
(Q5RCG7) RecName: Full=Angio-associated migratory cell protein; 49 4e-04
DQ340807_1(DQ340807|pid:none) Carassius auratus gibelio HIRA mRN... 49 4e-04
(Q13685) RecName: Full=Angio-associated migratory cell protein; ... 49 4e-04
CR456755_1(CR456755|pid:none) Homo sapiens full open reading fra... 49 4e-04
AJ278387_1(AJ278387|pid:none) Xenopus laevis partial mRNA for HI... 49 4e-04
A59246(A59246;JE0283) HIRA protein - fruit fly (Drosophila melan... 49 4e-04
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 49 4e-04
CU928175_464(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 41 5e-04
(Q9HAD4) RecName: Full=WD repeat-containing protein 41; &BC0402... 49 5e-04
AC149637_4(AC149637|pid:none) Medicago truncatula clone mth2-181... 49 5e-04
AK021855_1(AK021855|pid:none) Homo sapiens cDNA FLJ11793 fis, cl... 49 5e-04
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 49 5e-04
AJ580822_1(AJ580822|pid:none) Lotus corniculatus var. japonicus ... 49 5e-04
BC166792_1(BC166792|pid:none) Rattus norvegicus WD repeat domain... 49 5e-04
AK001766_1(AK001766|pid:none) Homo sapiens cDNA FLJ10904 fis, cl... 49 5e-04
AC146745_23(AC146745|pid:none) Medicago truncatula clone mth2-53... 49 5e-04
AB264260_1(AB264260|pid:none) Cryptomeria japonica CC2196 gene f... 49 5e-04
AF115511_1(AF115511|pid:none) Homo sapiens MSTP048 (MST048) mRNA... 49 5e-04
AM778950_12(AM778950|pid:none) Microcystis aeruginosa PCC 7806 g... 49 5e-04
AB264259_1(AB264259|pid:none) Cryptomeria japonica CC2196 gene f... 49 5e-04
(Q7YR70) RecName: Full=Angio-associated migratory cell protein; ... 49 5e-04
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 49 5e-04
AK296423_1(AK296423|pid:none) Homo sapiens cDNA FLJ50556 complet... 49 5e-04
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 49 5e-04
AC011717_4(AC011717|pid:none) Arabidopsis thaliana chromosome 1 ... 49 5e-04
(Q9CAA0) RecName: Full=Coatomer subunit beta'-1; AltName: Full=B... 49 5e-04
BC037320_1(BC037320|pid:none) Homo sapiens F-box and WD-40 domai... 49 5e-04
AP008931_213(AP008931|pid:none) Rhodococcus erythropolis PR4 pla... 40 6e-04
AB171224_1(AB171224|pid:none) Macaca fascicularis brain cDNA clo... 48 7e-04
(Q9SJT9) RecName: Full=Coatomer subunit alpha-2; AltName: Full=A... 48 7e-04
(Q4P9P9) RecName: Full=Nuclear distribution protein PAC1; AltNam... 48 7e-04
AL596139_5(AL596139|pid:none) BAC A of library A from Tetraodon ... 48 7e-04
CP000828_4370(CP000828|pid:none) Acaryochloris marina MBIC11017,... 48 7e-04
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 48 7e-04
(Q9UT85) RecName: Full=Uncharacterized WD repeat-containing prot... 48 7e-04
BC169262_1(BC169262|pid:none) Synthetic construct Homo sapiens c... 48 7e-04
AB044749_1(AB044749|pid:none) Homo sapiens mRNA for WDC146, comp... 48 7e-04
(Q9C0J8) RecName: Full=WD repeat-containing protein 33; AltName:... 48 7e-04
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 48 7e-04
AB086191_1(AB086191|pid:none) Mus musculus mRNA for putative WDC... 48 7e-04
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 48 7e-04
AY463620_1(AY463620|pid:none) Arabidopsis thaliana TAF5 (At5g251... 48 7e-04
AB264263_1(AB264263|pid:none) Chamaecyparis pisifera CC2196 gene... 48 7e-04
AB264261_1(AB264261|pid:none) Thujopsis dolabrata CC2196 gene fo... 48 7e-04
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 48 7e-04
BT036985_1(BT036985|pid:none) Zea mays full-length cDNA clone ZM... 48 7e-04
AY648770_1(AY648770|pid:none) Danio rerio FLJ11294-like mRNA, pa... 48 7e-04
AL953881_1(AL953881|pid:none) Zebrafish DNA sequence from clone ... 48 7e-04
AX722159_1(AX722159|pid:none) Sequence 17 from Patent WO03024999... 48 7e-04
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 48 7e-04
(Q00664) RecName: Full=Nuclear distribution protein nudF; &U220... 48 7e-04
AK032174_1(AK032174|pid:none) Mus musculus adult male olfactory ... 48 7e-04
CR860672_1(CR860672|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2... 48 7e-04
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 48 7e-04
(Q969H0) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 48 7e-04
AK223449_1(AK223449|pid:none) Homo sapiens mRNA for F-box protei... 48 7e-04
AF383178_1(AF383178|pid:none) Homo sapiens F-box protein FBX30 m... 48 7e-04
(Q2TZG4) RecName: Full=Polyadenylation factor subunit 2; &AP007... 36 7e-04
CP000117_2876(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 48 9e-04
AY046013_1(AY046013|pid:none) Arabidopsis thaliana unknown prote... 48 9e-04
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 48 9e-04
CU928169_422(CU928169|pid:none) Kluyveromyces thermotolerans str... 48 9e-04
(Q9C827) RecName: Full=Coatomer subunit beta'-2; AltName: Full=B... 48 9e-04
FM992693_193(FM992693|pid:none) Candida dubliniensis CD36 chromo... 48 9e-04
EU652317_4(EU652317|pid:none) Philodina roseola GTP binding prot... 48 9e-04
AC018849_18(AC018849|pid:none) Arabidopsis thaliana chromosome 1... 48 9e-04
AM438365_3(AM438365|pid:none) Vitis vinifera contig VV78X052512.... 48 9e-04
AC034256_9(AC034256|pid:none) Sequence of BAC F7H2 from Arabidop... 48 9e-04
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 48 9e-04
(Q5A7Q6) RecName: Full=Nuclear distribution protein PAC1; AltNam... 48 9e-04
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 48 9e-04
CR382126_571(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 48 9e-04
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 48 9e-04
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 48 9e-04
(Q9BZK7) RecName: Full=F-box-like/WD repeat-containing protein T... 47 0.001
BT061468_1(BT061468|pid:none) Zea mays full-length cDNA clone ZM... 47 0.001
AF268195_1(AF268195|pid:none) Mus musculus strain BALB/c IRA1 mR... 47 0.001
BX294149_264(BX294149|pid:none) Rhodopirellula baltica SH 1 comp... 47 0.001
AF031081_1(AF031081|pid:none) Drosophila melanogaster HIRA homol... 47 0.001
(Q8BHJ5) RecName: Full=F-box-like/WD repeat-containing protein T... 47 0.001
AK022956_1(AK022956|pid:none) Homo sapiens cDNA FLJ12894 fis, cl... 47 0.001
AL929389_1(AL929389|pid:none) Zebrafish DNA sequence from clone ... 47 0.001
BC066616_1(BC066616|pid:none) Danio rerio nucleoporin 43, mRNA (... 47 0.001
BC073405_1(BC073405|pid:none) Xenopus laevis MGC80868 protein, m... 47 0.001
BC095217_1(BC095217|pid:none) Danio rerio zgc:110281, mRNA (cDNA... 47 0.001
BC135557_1(BC135557|pid:none) Xenopus tropicalis PAK1 interactin... 47 0.001
BC167995_1(BC167995|pid:none) Xenopus tropicalis hypothetical pr... 47 0.001
CR380949_26(CR380949|pid:none) Candida glabrata strain CBS138 ch... 47 0.001
(Q5AGM0) RecName: Full=Protein HIR2; 47 0.001
CR859650_1(CR859650|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 47 0.001
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 47 0.001
AK299950_1(AK299950|pid:none) Homo sapiens cDNA FLJ58422 complet... 47 0.001
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 47 0.001
AL031804_11(AL031804|pid:none) Arabidopsis thaliana DNA chromoso... 47 0.001
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 47 0.001
AK036064_1(AK036064|pid:none) Mus musculus 16 days neonate cereb... 47 0.001
S45344(S45344) TUP1 like enhancer - human &X75296_1(X75296|pid:... 47 0.001
AF106576_4(AF106576|pid:none) Caenorhabditis elegans cosmid W07E... 47 0.001
(P54198) RecName: Full=Protein HIRA; AltName: Full=TUP1-like enh... 47 0.001
CR382129_128(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 47 0.001
AK289809_1(AK289809|pid:none) Homo sapiens cDNA FLJ78369 complet... 47 0.001
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 47 0.001
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 47 0.001
(O43017) RecName: Full=Set1 complex component swd3; Sho... 47 0.001
FN392320_453(FN392320|pid:none) Pichia pastoris GS115 chromosome... 47 0.001
BC032721_1(BC032721|pid:none) Homo sapiens HIR histone cell cycl... 47 0.001
AB384712_1(AB384712|pid:none) Synthetic construct DNA, clone: pF... 47 0.001
CR382135_388(CR382135|pid:none) Debaryomyces hansenii strain CBS... 47 0.001
(Q54SD4) RecName: Full=Probable histone-binding protein rbbD; 47 0.001
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 47 0.001
AJ719937_1(AJ719937|pid:none) Gallus gallus mRNA for hypothetica... 47 0.001
BC138095_1(BC138095|pid:none) Mus musculus WD repeat domain 41, ... 47 0.001
I37465(I37465;I37464;S58177) HIRA protein - human &X81844_1(X81... 47 0.001
AF101480_1(AF101480|pid:none) Trypanosoma brucei pf20 homolog (T... 47 0.001
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 47 0.001
X77633_1(X77633|pid:none) H.sapiens HIRA mRNA. 47 0.001
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 47 0.001
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 47 0.001
AY174059_1(AY174059|pid:none) Plasmodium falciparum activated pr... 47 0.001
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 47 0.001
(Q7SZM9) RecName: Full=F-box-like/WD repeat-containing protein T... 47 0.002
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 47 0.002
AC148304_16(AC148304|pid:none) Medicago truncatula clone mth2-21... 47 0.002
CR382125_207(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 47 0.002
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 47 0.002
BC160737_1(BC160737|pid:none) Xenopus laevis nuclear receptor co... 47 0.002
(P61480) RecName: Full=Ribosome biogenesis protein WDR12; AltNam... 47 0.002
BC052856_1(BC052856|pid:none) Mus musculus histone cell cycle re... 47 0.002
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 47 0.002
CP001291_699(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 47 0.002
AK151820_1(AK151820|pid:none) Mus musculus bone marrow macrophag... 47 0.002
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 47 0.002
S45345(S45345) TUP1-like enhancer - mouse &X75295_1(X75295|pid:... 47 0.002
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 47 0.002
CP000719_62(CP000719|pid:none) Yersinia pseudotuberculosis IP 31... 47 0.002
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 47 0.002
BC123966_1(BC123966|pid:none) Xenopus tropicalis transducin (bet... 47 0.002
X99712_1(X99712|pid:none) M.musculus mRNA for HIRA protein. 47 0.002
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 47 0.002
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 47 0.002
(Q68FJ6) RecName: Full=p21-activated protein kinase-interacting ... 47 0.002
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 47 0.002
AE016820_549(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 47 0.002
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 47 0.002
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 47 0.002
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 47 0.002
AE014187_454(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 47 0.002
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 47 0.002
CR382137_211(CR382137|pid:none) Debaryomyces hansenii strain CBS... 46 0.003
FN392322_885(FN392322|pid:none) Pichia pastoris GS115 chromosome... 46 0.003
CU640366_1209(CU640366|pid:none) Podospora anserina genomic DNA ... 46 0.003
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 46 0.003
AP008213_479(AP008213|pid:none) Oryza sativa (japonica cultivar-... 46 0.003
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 46 0.003
AE014296_3092(AE014296|pid:none) Drosophila melanogaster chromos... 46 0.003
CP000117_1621(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 46 0.003
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 46 0.003
AP004273_30(AP004273|pid:none) Oryza sativa Japonica Group genom... 46 0.003
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 46 0.003
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 46 0.003
(Q32SG6) RecName: Full=Protein HIRA; AltName: Full=Histone regul... 46 0.003
AP003517_26(AP003517|pid:none) Oryza sativa Japonica Group genom... 46 0.003
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 46 0.003
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 46 0.003
AB179186_1(AB179186|pid:none) Macaca fascicularis testis cDNA cl... 46 0.003
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 46 0.003
AK002314_1(AK002314|pid:none) Mus musculus adult male kidney cDN... 46 0.003
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 46 0.003
BC084093_1(BC084093|pid:none) Xenopus laevis hypothetical LOC495... 46 0.003
(Q5KBD2) RecName: Full=Protein HIR1; &AE017349_296(AE017349|pid... 46 0.003
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 46 0.003
BC120444_1(BC120444|pid:none) Bos taurus WD repeat domain 41, mR... 46 0.003
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 46 0.003
FM992691_442(FM992691|pid:none) Candida dubliniensis CD36 chromo... 46 0.003
CT573213_677(CT573213|pid:none) Frankia alni str. ACN14A chromos... 46 0.003
BC159424_1(BC159424|pid:none) Rattus norvegicus angio-associated... 46 0.003
(Q95RJ9) RecName: Full=F-box-like/WD repeat-containing protein e... 46 0.003
(Q94A40) RecName: Full=Coatomer subunit alpha-1; AltName: Full=A... 46 0.003
CP001037_6(CP001037|pid:none) Nostoc punctiforme PCC 73102, comp... 46 0.003
AP008209_945(AP008209|pid:none) Oryza sativa (japonica cultivar-... 46 0.003
S36113(S36113)LIS-1 protein - human 46 0.003
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 46 0.003
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 46 0.003
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 46 0.003
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 46 0.003
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 46 0.003
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 46 0.003
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 46 0.003
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 46 0.003
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 46 0.003
CR858303_1(CR858303|pid:none) Pongo abelii mRNA; cDNA DKFZp469M0... 46 0.003
BX248416_6(BX248416|pid:none) Zebrafish DNA sequence from clone ... 45 0.004
FN392321_1125(FN392321|pid:none) Pichia pastoris GS115 chromosom... 45 0.004
AM920430_81(AM920430|pid:none) Penicillium chrysogenum Wisconsin... 45 0.004
AK101611_1(AK101611|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.004
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 45 0.004
(Q6BUA6) RecName: Full=Nuclear distribution protein PAC1; AltNam... 45 0.004
(Q96WV5) RecName: Full=Putative coatomer subunit alpha; AltName:... 45 0.004
BX649315_6(BX649315|pid:none) Zebrafish DNA sequence from clone ... 45 0.004
AE017341_485(AE017341|pid:none) Cryptococcus neoformans var. neo... 45 0.004
BC084871_1(BC084871|pid:none) Xenopus laevis hypothetical LOC495... 45 0.004
AY812006_1(AY812006|pid:none) Schistosoma japonicum SJCHGC04162 ... 45 0.004
CR855235_18(CR855235|pid:none) Oryza sativa genomic DNA, chromos... 45 0.004
CP000820_4167(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 45 0.004
AP003977_10(AP003977|pid:none) Oryza sativa Japonica Group genom... 45 0.004
BC135552_1(BC135552|pid:none) Xenopus tropicalis hypothetical pr... 45 0.004
(Q9NDC9) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Pr... 45 0.004
AM910987_42(AM910987|pid:none) Plasmodium knowlesi strain H chro... 45 0.006
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 45 0.006
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 45 0.006
AK315568_1(AK315568|pid:none) Homo sapiens cDNA, FLJ96640, highl... 45 0.006
FN357718_2(FN357718|pid:none) Schistosoma mansoni genome sequenc... 45 0.006
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 45 0.006
(Q99KN2) RecName: Full=Protein CIAO1; AltName: Full=WD repeat-co... 45 0.006
AK303346_1(AK303346|pid:none) Homo sapiens cDNA FLJ53398 complet... 45 0.006
(Q6FNV4) RecName: Full=Protein transport protein SEC13-1; &CR38... 45 0.006
AC133571_4(AC133571|pid:none) Medicago truncatula clone mth2-10h... 45 0.006
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 45 0.006
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 45 0.006
CU633900_125(CU633900|pid:none) Podospora anserina genomic DNA c... 45 0.006
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 45 0.006
(Q5M7T1) RecName: Full=Protein CIAO1; AltName: Full=WD repeat-co... 45 0.006
CP000249_314(CP000249|pid:none) Frankia sp. CcI3, complete genome. 45 0.006
(O62621) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 45 0.006
AJ006523_1(AJ006523|pid:none) Drosophila melanogaster mRNA for t... 45 0.006
AK000742_1(AK000742|pid:none) Homo sapiens cDNA FLJ20735 fis, cl... 45 0.006
BC158602_1(BC158602|pid:none) Rattus norvegicus sperm associated... 45 0.006
AF195765_1(AF195765|pid:none) Homo sapiens L2DTL protein (L2DTL)... 45 0.006
AK001261_1(AK001261|pid:none) Homo sapiens cDNA FLJ10399 fis, cl... 45 0.006
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 45 0.006
BC097669_1(BC097669|pid:none) Xenopus laevis hypothetical protei... 45 0.006
AB076893_1(AB076893|pid:none) Ciona intestinalis Ci-betaTrCP mRN... 45 0.006
AX213281_1(AX213281|pid:none) Sequence 1 from Patent WO0159115. 45 0.006
AL592297_1(AL592297|pid:none) Human DNA sequence from clone RP11... 45 0.006
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 45 0.006
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 45 0.006
(Q20168) RecName: Full=Probable coatomer subunit beta'; AltName:... 45 0.006
CR382131_810(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 45 0.006
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 45 0.006
CR940353_232(CR940353|pid:none) Theileria annulata strain Ankara... 45 0.006
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 45 0.006
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 45 0.007
AY813407_1(AY813407|pid:none) Schistosoma japonicum SJCHGC03910 ... 45 0.007
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 45 0.007
CR760326_1(CR760326|pid:none) Xenopus tropicalis finished cDNA, ... 45 0.007
AF064071_1(AF064071|pid:none) Mus musculus apoptotic protease ac... 45 0.007
AK220340_1(AK220340|pid:none) Mus musculus mRNA for mKIAA0413 pr... 45 0.007
(Q0VC24) RecName: Full=Ribosome biogenesis protein WDR12; AltNam... 45 0.007
BC131683_1(BC131683|pid:none) Mus musculus apoptotic peptidase a... 45 0.007
AE017343_599(AE017343|pid:none) Cryptococcus neoformans var. neo... 45 0.007
AF339501_1(AF339501|pid:none) Pichia angusta alpha-COP-like prot... 45 0.007
U63922_1(U63922|pid:none) Xenopus laevis beta-transducin repeat ... 45 0.007
CU633900_158(CU633900|pid:none) Podospora anserina genomic DNA c... 45 0.007
(O88879) RecName: Full=Apoptotic protease-activating factor 1; ... 45 0.007
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 45 0.007
(Q91854) RecName: Full=Beta-TrCP; AltName: Full=Beta-transducin ... 45 0.007
U63921_1(U63921|pid:none) Xenopus laevis beta-transducin repeat ... 45 0.007
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 45 0.007
AM270026_40(AM270026|pid:none) Aspergillus niger contig An02c031... 45 0.007
AM910987_83(AM910987|pid:none) Plasmodium knowlesi strain H chro... 45 0.007
(Q9EPV5) RecName: Full=Apoptotic protease-activating factor 1; ... 44 0.010
AF032878_1(AF032878|pid:none) Drosophila melanogaster Slimb (sli... 44 0.010
AK074532_1(AK074532|pid:none) Homo sapiens cDNA FLJ90051 fis, cl... 44 0.010
AK313417_1(AK313417|pid:none) Homo sapiens cDNA, FLJ93955, highl... 44 0.010
AE017343_631(AE017343|pid:none) Cryptococcus neoformans var. neo... 44 0.010
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 44 0.010
AY485643_1(AY485643|pid:none) Hordeum vulgare subsp. vulgare BAC... 44 0.010
CP000582_362(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 44 0.010
AM502251_6(AM502251|pid:none) Leishmania infantum chromosome 33. 44 0.010
(Q6BIR7) RecName: Full=Protein HIR2; 44 0.010
AM910994_582(AM910994|pid:none) Plasmodium knowlesi strain H chr... 44 0.010
CR382139_363(CR382139|pid:none) Debaryomyces hansenii strain CBS... 44 0.010
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 44 0.010
AM920437_209(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 44 0.010
BT079708_1(BT079708|pid:none) Esox lucius clone eluc-evq-516-111... 44 0.010
BC056099_1(BC056099|pid:none) Xenopus laevis hypothetical protei... 44 0.010
BC139834_1(BC139834|pid:none) Homo sapiens WD repeat domain 32, ... 44 0.010
AE017344_135(AE017344|pid:none) Cryptococcus neoformans var. neo... 44 0.010
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 44 0.010
BC108686_1(BC108686|pid:none) Homo sapiens WD repeat domain 32, ... 44 0.010
CP000820_6355(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 44 0.010
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 44 0.010
(Q0J3D9) RecName: Full=Coatomer subunit alpha-3; AltName: Full=A... 44 0.010
CP001577_363(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 44 0.010
AM432662_4(AM432662|pid:none) Vitis vinifera contig VV78X151857.... 44 0.010
CP001328_404(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 44 0.010
FM992695_153(FM992695|pid:none) Candida dubliniensis CD36 chromo... 44 0.010
AK109741_1(AK109741|pid:none) Oryza sativa Japonica Group cDNA c... 44 0.010
(Q5ZJW8) RecName: Full=Denticleless protein homolog; &AJ720316_... 44 0.010
AK292343_1(AK292343|pid:none) Homo sapiens cDNA FLJ77821 complet... 44 0.013
AL590447_75(AL590447|pid:none) chromosome VII of strain GB-M1 of... 44 0.013
AP000492_9(AP000492|pid:none) Oryza sativa Japonica Group genomi... 44 0.013
CP000393_4067(CP000393|pid:none) Trichodesmium erythraeum IMS101... 44 0.013
CR749295_1(CR749295|pid:none) Homo sapiens mRNA; cDNA DKFZp781N0... 44 0.013
AK295870_1(AK295870|pid:none) Homo sapiens cDNA FLJ54002 complet... 44 0.013
BC123621_1(BC123621|pid:none) Bos taurus beta-transducin repeat ... 44 0.013
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 44 0.013
AF112979_1(AF112979|pid:none) Mus musculus beta-transducin repea... 44 0.013
CR382136_675(CR382136|pid:none) Debaryomyces hansenii strain CBS... 44 0.013
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 44 0.013
EU652317_2(EU652317|pid:none) Philodina roseola GTP binding prot... 44 0.013
S33263(S33263;S45729;A54593)transcription initiation factor IID-... 44 0.013
(Q9AUR7) RecName: Full=Coatomer subunit alpha-2; AltName: Full=A... 44 0.013
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 44 0.013
BC085125_1(BC085125|pid:none) Rattus norvegicus beta-transducin ... 44 0.013
BT072537_1(BT072537|pid:none) Salmo salar clone ssal-rgf-529-231... 44 0.013
AF129530_1(AF129530|pid:none) Homo sapiens chromosome 10 F-box p... 44 0.013
AK303253_1(AK303253|pid:none) Homo sapiens cDNA FLJ58655 complet... 44 0.013
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 44 0.013
AB169034_1(AB169034|pid:none) Macaca fascicularis testis cDNA, c... 44 0.013
(P49846) RecName: Full=Transcription initiation factor TFIID sub... 44 0.013
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 44 0.013
AK156660_1(AK156660|pid:none) Mus musculus activated spleen cDNA... 44 0.013
AF081887_1(AF081887|pid:none) Mus musculus ubiquitin ligase FWD1... 44 0.013
CP000496_274(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 44 0.013
CR954201_245(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 44 0.013
AM920427_190(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 44 0.013
AE016818_101(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 44 0.016
(Q9WUC8) RecName: Full=Pleiotropic regulator 1; &AF128241_1(AF1... 44 0.016
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 44 0.016
CT005260_9(CT005260|pid:none) Leishmania major strain Friedlin, ... 44 0.016
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 44 0.016
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 44 0.016
AK293918_1(AK293918|pid:none) Homo sapiens cDNA FLJ52123 complet... 44 0.016
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 44 0.016
T16607(T16607)hypothetical protein K10B2.1 - Caenorhabditis eleg... 44 0.016
AL365234_21(AL365234|pid:none) Arabidopsis thaliana DNA chromoso... 44 0.016
CP000383_752(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 44 0.016
AY039964_1(AY039964|pid:none) Arabidopsis thaliana unknown prote... 44 0.016
AK341411_1(AK341411|pid:none) Acyrthosiphon pisum ACYPI006367 mR... 44 0.016
EU216960_1(EU216960|pid:none) Drosophila melanogaster strain ZW1... 44 0.016
CR382127_605(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 44 0.016
AM920437_2228(AM920437|pid:none) Penicillium chrysogenum Wiscons... 44 0.016
AE014298_1819(AE014298|pid:none) Drosophila melanogaster chromos... 44 0.016
BC159294_1(BC159294|pid:none) Xenopus tropicalis WD repeat domai... 44 0.016
(O43660) RecName: Full=Pleiotropic regulator 1; &AF044333_1(AF0... 44 0.016
AK229865_1(AK229865|pid:none) Arabidopsis thaliana mRNA for puta... 44 0.016
EU746019_1(EU746019|pid:none) Drosophila simulans isolate MD004 ... 44 0.016
FM992692_234(FM992692|pid:none) Candida dubliniensis CD36 chromo... 44 0.016
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 44 0.016
AK317630_1(AK317630|pid:none) Arabidopsis thaliana AT3G15880 mRN... 44 0.016
AM910991_434(AM910991|pid:none) Plasmodium knowlesi strain H chr... 44 0.016
BC020786_1(BC020786|pid:none) Homo sapiens pleiotropic regulator... 44 0.016
AF339101_1(AF339101|pid:none) Heterodera glycines beta-transduci... 44 0.016
EU746018_1(EU746018|pid:none) Drosophila simulans isolate MD003 ... 44 0.016
AB017071_28(AB017071|pid:none) Arabidopsis thaliana genomic DNA,... 44 0.016
AY089600_1(AY089600|pid:none) Drosophila melanogaster RE19540 fu... 44 0.016
(Q2KID6) RecName: Full=Pleiotropic regulator 1; &BC112677_1(BC1... 44 0.016
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 44 0.016
(Q9GZL7) RecName: Full=Ribosome biogenesis protein WDR12; AltNam... 44 0.016
EU216957_1(EU216957|pid:none) Drosophila melanogaster strain ZW1... 44 0.016
X99375_1(X99375|pid:none) G.gallus mRNA for Chira protein. 44 0.016
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 44 0.016
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 44 0.016
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 44 0.016
(Q5REE6) RecName: Full=Ribosome biogenesis protein WDR12; AltNam... 44 0.016
AE016818_604(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 44 0.017
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 44 0.017
AJ719967_1(AJ719967|pid:none) Gallus gallus mRNA for hypothetica... 44 0.017
(Q6PE01) RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa... 44 0.017
AF083383_1(AF083383|pid:none) Homo sapiens 38kDa splicing factor... 44 0.017
(Q5IH81) RecName: Full=Eukaryotic translation initiation factor ... 43 0.022
(Q7ZUV2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 43 0.022
(Q58D20) RecName: Full=Notchless protein homolog 1; 43 0.022
EU706823_1(EU706823|pid:none) Drosophila melanogaster isolate OK... 43 0.022
CR382124_306(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 43 0.022
AK340344_1(AK340344|pid:none) Acyrthosiphon pisum ACYPI003750 mR... 43 0.022
CP000117_2141(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 43 0.022
CP001337_1308(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 43 0.022
(Q54D08) RecName: Full=Protein LST8 homolog; AltName: Full=Letha... 43 0.022
CU633872_233(CU633872|pid:none) Podospora anserina genomic DNA c... 43 0.022
CT005270_6(CT005270|pid:none) Leishmania major strain Friedlin, ... 43 0.022
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 43 0.022
AX885903_1(AX885903|pid:none) Sequence 1766 from Patent EP1033401. 43 0.022
AK172208_1(AK172208|pid:none) Mus musculus activated spleen cDNA... 43 0.022
(Q5E966) RecName: Full=Eukaryotic translation initiation factor ... 43 0.022
(Q9NVX2) RecName: Full=Notchless protein homolog 1; &AK001320_1... 43 0.022
AK001743_1(AK001743|pid:none) Homo sapiens cDNA FLJ10881 fis, cl... 43 0.022
(Q00659) RecName: Full=Sulfur metabolite repression control prot... 43 0.022
BC085101_1(BC085101|pid:none) Mus musculus WD repeat domain 32, ... 43 0.022
(P74442) RecName: Full=Uncharacterized WD repeat-containing prot... 43 0.022
BC056720_1(BC056720|pid:none) Danio rerio PRP4 pre-mRNA processi... 43 0.022
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 43 0.022
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 43 0.022
BC045316_1(BC045316|pid:none) Danio rerio denticleless homolog (... 43 0.022
AL939125_246(AL939125|pid:none) Streptomyces coelicolor A3(2) co... 43 0.022
AY888456_1(AY888456|pid:none) Synthetic construct Homo sapiens c... 43 0.022
(B0BNA7) RecName: Full=Eukaryotic translation initiation factor ... 43 0.022
BC002884_1(BC002884|pid:none) Homo sapiens notchless homolog 1 (... 43 0.022
(A2AKB9) RecName: Full=WD repeat-containing protein 32; &AL7722... 43 0.022

>AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843
DNA, complete genome.
Length = 962

Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = +2

Query: 194 SLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVY 373
S+ F P D + + + S D+T +WN TG++++TL GH +V ++ N D +
Sbjct: 680 SVNFSP-DGKTLVSGSGDKTIKLWNVETGQEIRTLKGHDNSV-----ISVNFSPDGK--- 730

Query: 374 TILATCADDQTIRIWNTDIWEEILVLNTND 463
L + + D TI++WN + EEI L +D
Sbjct: 731 -TLVSGSGDNTIKLWNVETGEEIRTLKGHD 759

Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +1

Query: 583 ISSNEKFKLEWNYKAHQPV--VGPQDLKFGSINKFAEIWSLTFHPTDNRFIATCSEDQTT 756
+S + KL WN K + + + D+ F S+N F P D + + + S D+T
Sbjct: 777 VSRDNTIKL-WNVKTGKEIRTIKGHDIYFRSVN---------FSP-DGKTLVSGSGDKTI 825

Query: 757 VIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVYTILATCADDQTIRIWNTDIWE 936
+WN TG +++TL GH DW N+ N + T L + ++D TI++WN + +
Sbjct: 826 KLWNVETGTEIRTLKGH-------DWFV-NSVNFSPDGKT-LVSGSNDNTIKLWNVETGQ 876

Query: 937 EILVL 951
EI L
Sbjct: 877 EIRTL 881

Score = 48.5 bits (114), Expect = 5e-04
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2

Query: 83 ISSNEKFKLEWNYKAHQPV--VGPQDLKFGSINKFAEIWSLTFHPTDNRFIATCSEDQTT 256
+S + KL WN K + + + D+ F S+N F P D + + + S D+T
Sbjct: 777 VSRDNTIKL-WNVKTGKEIRTIKGHDIYFRSVN---------FSP-DGKTLVSGSGDKTI 825

Query: 257 VIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVYTILATCADDQTIRIWNTDIWE 436
+WN TG +++TL GH DW N+ N + T L + ++D TI++WN + +
Sbjct: 826 KLWNVETGTEIRTLKGH-------DWFV-NSVNFSPDGKT-LVSGSNDNTIKLWNVETGQ 876

Query: 437 EILVL 451
EI L
Sbjct: 877 EIRTL 881

Score = 48.5 bits (114), Expect = 5e-04
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = +1

Query: 694 SLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVY 873
S+ F P D + + + S D+T +WN TG++++TL GH +V ++ N D +
Sbjct: 680 SVNFSP-DGKTLVSGSGDKTIKLWNVETGQEIRTLKGHDNSV-----ISVNFSPDGK--- 730

Query: 874 TILATCADDQTIRIWNTDIWEEILVLNTND 963
L + + D TI++WN + EEI L +D
Sbjct: 731 -TLVSGSGDNTIKLWNVETGEEIRTLKGHD 759

Score = 47.8 bits (112), Expect = 9e-04
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +2

Query: 188 IWSLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEK 367
+ S+ F P D + + + S D T +WN TGE+++TL GH V V N D +
Sbjct: 636 VQSVNFSP-DGKTLVSGSWDNTIKLWNVETGEEIRTLKGHNGPVNSV-----NFSPDGK- 688

Query: 368 VYTILATCADDQTIRIWNTDIWEEILVLNTND 463
L + + D+TI++WN + +EI L +D
Sbjct: 689 ---TLVSGSGDKTIKLWNVETGQEIRTLKGHD 717

Score = 47.8 bits (112), Expect = 9e-04
Identities = 40/127 (31%), Positives = 63/127 (49%)
Frame = +2

Query: 86 SSNEKFKLEWNYKAHQPVVGPQDLKFGSINKFAEIWSLTFHPTDNRFIATCSEDQTTVIW 265
S ++ KL WN + Q + + LK G N + S+ F P D + + + S D T +W
Sbjct: 694 SGDKTIKL-WNVETGQEI---RTLK-GHDNS---VISVNFSP-DGKTLVSGSGDNTIKLW 744

Query: 266 NRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVYTILATCADDQTIRIWNTDIWEEIL 445
N TGE+++TL GH + V V N D + L + + D TI++WN +EI
Sbjct: 745 NVETGEEIRTLKGHDSYVNSV-----NFSPDGK----TLVSVSRDNTIKLWNVKTGKEIR 795

Query: 446 VLNTNDI 466
+ +DI
Sbjct: 796 TIKGHDI 802

Score = 47.8 bits (112), Expect = 9e-04
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +1

Query: 688 IWSLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEK 867
+ S+ F P D + + + S D T +WN TGE+++TL GH V V N D +
Sbjct: 636 VQSVNFSP-DGKTLVSGSWDNTIKLWNVETGEEIRTLKGHNGPVNSV-----NFSPDGK- 688

Query: 868 VYTILATCADDQTIRIWNTDIWEEILVLNTND 963
L + + D+TI++WN + +EI L +D
Sbjct: 689 ---TLVSGSGDKTIKLWNVETGQEIRTLKGHD 717

Score = 47.8 bits (112), Expect = 9e-04
Identities = 40/127 (31%), Positives = 63/127 (49%)
Frame = +1

Query: 586 SSNEKFKLEWNYKAHQPVVGPQDLKFGSINKFAEIWSLTFHPTDNRFIATCSEDQTTVIW 765
S ++ KL WN + Q + + LK G N + S+ F P D + + + S D T +W
Sbjct: 694 SGDKTIKL-WNVETGQEI---RTLK-GHDNS---VISVNFSP-DGKTLVSGSGDNTIKLW 744

Query: 766 NRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVYTILATCADDQTIRIWNTDIWEEIL 945
N TGE+++TL GH + V V N D + L + + D TI++WN +EI
Sbjct: 745 NVETGEEIRTLKGHDSYVNSV-----NFSPDGK----TLVSVSRDNTIKLWNVKTGKEIR 795

Query: 946 VLNTNDI 966
+ +DI
Sbjct: 796 TIKGHDI 802

Score = 46.2 bits (108), Expect = 0.003
Identities = 40/158 (25%), Positives = 69/158 (43%)
Frame = +1

Query: 478 YSYLYIFIXXXXXXXLVAVGTTGGNLYVFKKNDDDISSNEKFKLEWNYKAHQPVVGPQDL 657
+S +F+ V G L K D ++ + + L W + ++ + G +D
Sbjct: 536 FSSWSLFVQGKDLDAFVLAIKAGKTLQKQHKYDKEVMNTLQALLNWKSERNR-LEGHKDF 594

Query: 658 KFGSINKFAEIWSLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWL 837
+ S+ F P D + + + S D T +WN TGE+++TL GH D +
Sbjct: 595 ----------VTSVNFSP-DGKTLVSVSRDNTIKLWNVETGEEIRTLKGH-------DGV 636

Query: 838 TYNNENDNEKVYTILATCADDQTIRIWNTDIWEEILVL 951
N + + K L + + D TI++WN + EEI L
Sbjct: 637 QSVNFSPDGKT---LVSGSWDNTIKLWNVETGEEIRTL 671

Score = 45.1 bits (105), Expect = 0.006
Identities = 29/88 (32%), Positives = 46/88 (52%)
Frame = +2

Query: 188 IWSLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEK 367
+ S+ F P D + + + S D T +WN TGE+++TL GH D + N + + K
Sbjct: 595 VTSVNFSP-DGKTLVSVSRDNTIKLWNVETGEEIRTLKGH-------DGVQSVNFSPDGK 646

Query: 368 VYTILATCADDQTIRIWNTDIWEEILVL 451
L + + D TI++WN + EEI L
Sbjct: 647 T---LVSGSWDNTIKLWNVETGEEIRTL 671

Score = 43.5 bits (101), Expect = 0.016
Identities = 26/90 (28%), Positives = 47/90 (52%)
Frame = +2

Query: 194 SLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVY 373
S+ F P D + + + S D T +WN TG++++T+ GH + + + N D +
Sbjct: 764 SVNFSP-DGKTLVSVSRDNTIKLWNVKTGKEIRTIKGHD-----IYFRSVNFSPDGKT-- 815

Query: 374 TILATCADDQTIRIWNTDIWEEILVLNTND 463
L + + D+TI++WN + EI L +D
Sbjct: 816 --LVSGSGDKTIKLWNVETGTEIRTLKGHD 843

Score = 43.5 bits (101), Expect = 0.017
Identities = 26/90 (28%), Positives = 47/90 (52%)
Frame = +1

Query: 694 SLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVY 873
S+ F P D + + + S D T +WN TG++++T+ GH + + + N D +
Sbjct: 764 SVNFSP-DGKTLVSVSRDNTIKLWNVKTGKEIRTIKGHD-----IYFRSVNFSPDGKT-- 815

Query: 874 TILATCADDQTIRIWNTDIWEEILVLNTND 963
L + + D+TI++WN + EI L +D
Sbjct: 816 --LVSGSGDKTIKLWNVETGTEIRTLKGHD 843

Score = 43.1 bits (100), Expect = 0.022
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +2

Query: 194 SLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVY 373
S+ F P D + + + S D T +WN TG++++TL GH + V+ V +
Sbjct: 848 SVNFSP-DGKTLVSGSNDNTIKLWNVETGQEIRTLRGHGSFVSSVSFSPDGK-------- 898

Query: 374 TILATCADDQTIRIWN 421
L + +DD+TI++WN
Sbjct: 899 -TLVSGSDDKTIKLWN 913

Score = 43.1 bits (100), Expect = 0.022
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +1

Query: 694 SLTFHPTDNRFIATCSEDQTTVIWNRITGEKVKTLIGHTTAVTCVDWLTYNNENDNEKVY 873
S+ F P D + + + S D T +WN TG++++TL GH + V+ V +
Sbjct: 848 SVNFSP-DGKTLVSGSNDNTIKLWNVETGQEIRTLRGHGSFVSSVSFSPDGK-------- 898

Query: 874 TILATCADDQTIRIWN 921
L + +DD+TI++WN
Sbjct: 899 -TLVSGSDDKTIKLWN 913

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,655,969,474
Number of extensions: 29857818
Number of successful extensions: 95151
Number of sequences better than 10.0: 1697
Number of HSP's gapped: 89284
Number of HSP's successfully gapped: 6283
Length of query: 429
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 298
Effective length of database: 627,191,635
Effective search space: 186903107230
Effective search space used: 186903107230
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.90 gvh: 0.32 alm: 0.47 top: 0.47 tms: 0.00 mit: 0.23 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: nuclear
32.0 %: cytoplasmic
16.0 %: cytoskeletal
12.0 %: vacuolar
4.0 %: peroxisomal

>> prediction for Contig-U15284-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0