>Contig-U02967-1 (Contig-U02967-1Q) /CSM_Contig/Contig-U02967-1Q.Seq.d
AAATAAATATAAAAATGAAAATAATAATATTTTTTATAATATTATTATCT
TTAAATTTAATTTTAGCAAAAGAAAAGTTTGATTTTAAAAAATTAATAAA
TCAATATTCTGTAATATCATTAGAGAAAGATATCAGTTATTTATCAAAAA
ATGATAAATTAATGATAGAGATATTATTTAATGCATCAAAAATTGTTGAT
GATATATTTTGGAAACAAACATTGGGTAAAAGCAAACAACAATTTTTAGT
AAATTATAAAGATAAAGATATTAGAGAATATTGTTCAATAAATTATGGAC
CATGGGATAGATTAAATAACGATAATTCATTTATTGATGGTATTGGTAAT
AAACCACCAACTTTAAATTTTTATCCATTGGATATTACAGAAGATGAATT
TGATAATTTTAATAATAGTTTAAAAAAAAGTTCATATACTGTTTTAAGAA
GAGATAATGGTCAAAGTAAAAATTTAAAATGTATTTGGTATAATCAAGAA
TATAAAACTGAAGTAATGAAAATATCAAATTTATTAATGAAAGCATCAAA
TTATTCAAGTGATAAAGGATTTAAAGAATATTTAAAAAAAAGATCAATTG
CTTTATCAAATGATCAATATTATGATAGTGATATAACATGGATG

est1=AFL254F,1,645

INIKMKIIIFFIILLSLNLILAKEKFDFKKLINQYSVISLEKDISYLSKNDKLMIEILFN
ASKIVDDIFWKQTLGKSKQQFLVNYKDKDIREYCSINYGPWDRLNNDNSFIDGIGNKPPT
LNFYPLDITEDEFDNFNNSLKKSSYTVLRRDNGQSKNLKCIWYNQEYKTEVMKISNLLMK
ASNYSSDKGFKEYLKKRSIALSNDQYYDSDITWM

Frame A:
k*i*k*k**yfl*yyyl*i*f*qkkslilkn**inil*yh*rkisviyqkmin***ryyl
mhqkllmiyfgnkhwvkannnf**iikikilenivq*imdhgid*itiihllmvlvinhq
l*ifihwilqkmnliiliiv*kkvhilf*eeimvkvki*nvfgiikniklk**kyqiy**
khqiiqvikdlkni*kkdqllyqminimivi*hg


Frame B:
nkyknennnifyniiifkfnfskrkv*f*kinksifcniireryqlfikk**indrdii*
ciknc**yiletnig*kqttifskl*r*ry*rilfnklwtmg*ik*r*fiy*wyw**ttn
fkflsigyyrr*i**f***fkkkfiycfkkr*wsk*kfkmylv*sri*n*snenikfine
siklfk**ri*rifkkkincfik*sil***ynmd


Frame C:
INIKMKIIIFFIILLSLNLILAKEKFDFKKLINQYSVISLEKDISYLSKNDKLMIEILFN
ASKIVDDIFWKQTLGKSKQQFLVNYKDKDIREYCSINYGPWDRLNNDNSFIDGIGNKPPT
LNFYPLDITEDEFDNFNNSLKKSSYTVLRRDNGQSKNLKCIWYNQEYKTEVMKISNLLMK
ASNYSSDKGFKEYLKKRSIALSNDQYYDSDITWM

Query= Contig-U02967-1 (Contig-U02967-1Q)
/CSM_Contig/Contig-U02967-1Q.Seq.d
         (644 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U02967-1 (Contig-U02967-1Q) /CSM_Contig/Conti...   993  0.0
Contig-U01347-1 (Contig-U01347-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U13796-1 (Contig-U13796-1Q) /CSM_Contig/Conti...    36  0.045
Contig-U13079-1 (Contig-U13079-1Q) /CSM_Contig/Conti...    36  0.045
Contig-U10930-1 (Contig-U10930-1Q) /CSM_Contig/Conti...    36  0.045
Contig-U05547-1 (Contig-U05547-1Q) /CSM_Contig/Conti...    36  0.045
Contig-U13962-1 (Contig-U13962-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U13554-1 (Contig-U13554-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U12991-1 (Contig-U12991-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U12862-1 (Contig-U12862-1Q) /CSM_Contig/Conti...    34  0.18

>Contig-U02967-1 (Contig-U02967-1Q) /CSM_Contig/Contig-U02967-1Q.Seq.d
          Length = 644

 Score =  993 bits (501), Expect = 0.0
 Identities = 533/549 (97%)
 Strand = Plus / Plus

                                                                       
Query: 96  ataaatcaatattctgtaatatcattagagaaagatatcagttatttatcaaaaaatgat 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ataaatcaatattctgtaatatcattagagaaagatatcagttatttatcaaaaaatgat 155

                                                                       
Query: 156 aaattaatgatagagatattatttaatgcatcaaaaattgttgatgatatattttggaaa 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aaattaatgatagagatattatttaatgcatcaaaaattgttgatgatatattttggaaa 215

                                                                       
Query: 216 caaacattgggtaaaagcaaacaacaatttttagtaaattataaagataaagatattaga 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 caaacattgggtaaaagcaaacaacaatttttagtaaattataaagataaagatattaga 275

                                                                       
Query: 276 gaatattgttcaataaattatggaccatgggatagattaaataacgataattcatttatt 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaatattgttcaataaattatggaccatgggatagattaaataacgataattcatttatt 335

                                                                       
Query: 336 gatggtattggtaataaaccaccaactttaaatttttatccattggatattacagaagat 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gatggtattggtaataaaccaccaactttaaatttttatccattggatattacagaagat 395

                                                                       
Query: 396 gaatttgataattttaataatagtttnnnnnnnngttcatatactgttttaagaagagat 455
           ||||||||||||||||||||||||||        ||||||||||||||||||||||||||
Sbjct: 396 gaatttgataattttaataatagtttaaaaaaaagttcatatactgttttaagaagagat 455

                                                                       
Query: 456 aatggtcaaagtaaaaatttaaaatgtatttggtataatcaagaatataaaactgaagta 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aatggtcaaagtaaaaatttaaaatgtatttggtataatcaagaatataaaactgaagta 515

                                                                       
Query: 516 atgaaaatatcaaatttattaatgaaagcatcaaattattcaagtgataaaggatttaaa 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgaaaatatcaaatttattaatgaaagcatcaaattattcaagtgataaaggatttaaa 575

                                                                       
Query: 576 gaatatttnnnnnnnngatcaattgctttatcaaatgatcaatattatgatagtgatata 635
           ||||||||        ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaatatttaaaaaaaagatcaattgctttatcaaatgatcaatattatgatagtgatata 635

                    
Query: 636 acatggatg 644
           |||||||||
Sbjct: 636 acatggatg 644


>Contig-U01347-1 (Contig-U01347-1Q) /CSM_Contig/Contig-U01347-1Q.Seq.d
          Length = 849

 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 149 aaatgataaattaatgata 167
           |||||||||||||||||||
Sbjct: 478 aaatgataaattaatgata 496


>Contig-U13796-1 (Contig-U13796-1Q) /CSM_Contig/Contig-U13796-1Q.Seq.d
          Length = 671

 Score = 36.2 bits (18), Expect = 0.045
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 342 attggtaataaaccacca 359
           ||||||||||||||||||
Sbjct: 320 attggtaataaaccacca 303


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,228
Number of Sequences: 6905
Number of extensions: 14228
Number of successful extensions: 1670
Number of sequences better than 10.0: 196
length of query: 644
length of database: 5,674,871
effective HSP length: 16
effective length of query: 628
effective length of database: 5,564,391
effective search space: 3494437548
effective search space used: 3494437548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U02967-1 (Contig-U02967-1Q) /CSM_Contig/Contig-U02967-1Q.Seq.d
         (644 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ328288) Dictyostelium discoideum cDNA clone:dda23k14, 5' ...   634   0.0    3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    34   0.002  12
(CP000361) Arcobacter butzleri RM4018, complete genome.            40   0.002  19
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    36   0.004  16
(CS468878) Sequence 69 from Patent EP1748080.                      32   0.005  13
(CS419355) Sequence 69 from Patent WO2006094836.                   32   0.005  13
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    34   0.006  10
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    34   0.015  8
(CP000743) Methanococcus aeolicus Nankai-3, complete genome.       40   0.018  16
(CS468877) Sequence 68 from Patent EP1748080.                      32   0.027  12
(CS419354) Sequence 68 from Patent WO2006094836.                   32   0.027  12
(DN620030) UCRCS11_04L22_f Parent Washington Navel Orange Sc...    34   0.044  3
(L77117) Methanocaldococcus jannaschii DSM 2661, complete ge...    36   0.044  17
(AC084577) Caenorhabditis briggsae cosmid G39O05, complete s...    40   0.054  4
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    42   0.058  14
(AL035475) Plasmodium falciparum MAL4P2.                           36   0.063  8
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    32   0.067  15
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    32   0.067  15
(EI866201) CAH1-30O22TR CAA1Ba Cicer arietinum genomic clone...    42   0.069  2
(EJ226456) 1092400704707 Global-Ocean-Sampling_GS-27-01-01-1...    44   0.076  2
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen...    44   0.084  20
(CV706933) UCRPT01_0009B05_f Poncirus trifoliata CTV-challen...    34   0.084  3
(CX637099) UCRPT02_24F12_g Poncirus trifoliata Roots with Ir...    34   0.085  3
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    34   0.092  8
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    36   0.11   14
(AE017263) Mesoplasma florum L1 complete genome.                   34   0.11   13
(AC102380) Mus musculus chromosome 3, clone RP24-179F24, com...    44   0.21   4
(AL161537) Arabidopsis thaliana DNA chromosome 4, contig fra...    36   0.24   8
(EK355368) 1095468502439 Global-Ocean-Sampling_GS-31-01-01-1...    36   0.26   3
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3...    40   0.26   8
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ...    46   0.27   9
(AR584244) Sequence 1 from patent US 6797466.                      36   0.29   17
(AR271569) Sequence 1 from patent US 6503729.                      36   0.29   17
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    36   0.30   16
(AE017143) Haemophilus ducreyi strain 35000HP complete genome.     36   0.30   14
(EK012989) 1092955209046 Global-Ocean-Sampling_GS-31-01-01-1...    36   0.36   3
(AB012241) Arabidopsis thaliana genomic DNA, chromosome 5, T...    48   0.42   1
(AC202580) Medicago truncatula clone mth2-1k20, WORKING DRAF...    48   0.42   1
(AY334440) Candidatus Blochmannia ulcerosus isolate Culce18 ...    48   0.42   1
(AE015933) Staphylococcus epidermidis ATCC 12228 plasmid pSE...    36   0.43   3
(CP000939) Clostridium botulinum B1 str. Okra, complete genome.    34   0.51   18
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome.       34   0.53   10
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    34   0.54   9
(AM180355) Clostridium difficile 630 complete genome.              38   0.55   17
(CP000576) Prochlorococcus marinus str. MIT 9301, complete g...    34   0.57   14
(DI032723) Enterococcus faecalis polynucleotides and polypep...    38   0.64   3
(BD193846) Enterococcus faecialis polynucleotides and polype...    38   0.64   3
(AC130803) Medicago truncatula clone mth2-10g3, complete seq...    42   0.67   5
(AE017308) Mycoplasma mobile 163K complete genome.                 32   0.68   14
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    36   0.70   11
(DQ656883) Fannia armata 12S ribosomal RNA gene, partial seq...    38   0.71   2
(EU435537) Dicranosepsis unipilosa voucher su24 12S ribosoma...    38   0.72   2
(CR940352) Theileria annulata genomic DNA chromosome 3.            38   0.79   14
(BH958920) odi42f04.b1 B.oleracea002 Brassica oleracea genom...    34   0.79   3
(AC175905) Strongylocentrotus purpuratus clone R3-14F6, WORK...    36   0.79   7
(EU494484) Drosophila pseudoobscura voucher 105505 16S ribos...    38   0.80   2
(EU494489) Drosophila equinoxialis voucher 107548 16S riboso...    38   0.80   2
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    38   0.88   8
(EJ302525) 1095390044466 Global-Ocean-Sampling_GS-27-01-01-1...    44   0.89   2
(EJ213969) 1092351028532 Global-Ocean-Sampling_GS-27-01-01-1...    38   0.90   2
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    34   1.1    16
(AM108450) Lutzomyia longipalpis EST clone NSFM-54d05, seque...    32   1.1    2
(AR678685) Sequence 416 from patent US 6902893.                    36   1.1    4
(FB763441) Sequence 306 from Patent WO2008031133.                  36   1.2    4
(AR678684) Sequence 415 from patent US 6902893.                    36   1.2    4
(BK006337) TPA_exp: Drosophila persimilis mitochondrion, com...    38   1.2    3
(AL590346) Arabidopsis thaliana DNA chromosome 5, BAC clone ...    44   1.2    2
(EU494535) Scaptodrosophila pattersoni voucher 105497 16S ri...    38   1.3    2
(EU494476) Drosophila auraria voucher 109389 16S ribosomal R...    38   1.3    2
(EU494534) Scaptodrosophila lebanonensis voucher 105639 16S ...    38   1.3    2
(EU494492) Drosophila paulistorum voucher 107546 16S ribosom...    38   1.3    2
(EU494494) Drosophila willistoni voucher 106322 16S ribosoma...    38   1.3    2
(AP004983) Lotus japonicus genomic DNA, chromosome 6, clone:...    36   1.3    4
(AP010543) Lotus japonicus genomic DNA, chromosome 4, clone:...    40   1.3    6
(EU010376) Philophylla fossata 16S ribosomal RNA gene, parti...    40   1.4    2
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   1.4    11
(AF185066) Drosophila littoralis 16S ribosomal RNA gene, par...    38   1.4    2
(AF185067) Drosophila canadiana 16S ribosomal RNA gene, part...    38   1.4    2
(AF185059) Drosophila borealis strain 15010-0961.2 16S ribos...    38   1.4    2
(AF474341) Dictyostelium discoideum ABC transporter ABCC.9 (...    38   1.4    3
(AC198137) Zea mays chromosome unknown clone CH201-107G18; Z...    42   1.5    5
(EJ098077) 1095462294835 Global-Ocean-Sampling_GS-26-01-01-1...    32   1.5    3
(AC173933) Atelerix albiventris clone LB4-502P4, WORKING DRA...    34   1.6    4
(FB571361) Sequence 228 from Patent EP1865317.                     32   1.6    8
(FB571305) Sequence 172 from Patent EP1865317.                     32   1.6    8
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont...    34   1.6    8
(AM467256) Vitis vinifera contig VV78X156290.7, whole genome...    46   1.6    1
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    46   1.6    1
(AC111239) Rattus norvegicus clone CH230-234O14, *** SEQUENC...    46   1.6    1
(AC103334) Rattus norvegicus clone CH230-61K17, WORKING DRAF...    46   1.6    1
(AC099290) Rattus norvegicus clone CH230-75D5, WORKING DRAFT...    46   1.6    1
(CU638845) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.6    1
(CU606922) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.6    1
(CR925834) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   1.6    1
(AC225855) Tupaia belangeri clone CH275-227N10, WORKING DRAF...    46   1.6    1
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8...    46   1.6    1
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI...    46   1.6    1
(ET696377) CHO_OF359xc10r2.ab1 CHO_OF Nicotiana tabacum geno...    46   1.6    1
(ET049259) CHO_OF4941xb24f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   1.6    1
(EI840302) POTEZ48TF Solanum tuberosum RHPOTKEY BAC ends Sol...    46   1.6    1
(DU949158) 297162 Tomato MboI BAC Library Solanum lycopersic...    46   1.6    1
(DU049933) 147575 Tomato HindIII BAC Library Solanum lycoper...    46   1.6    1
(DE936891) Macropus eugenii DNA, BAC clone: MEB1-129N24_F, 5...    46   1.6    1
(CL029159) CH216-28J1_Sp6.1 CH216 Xenopus (Silurana) tropica...    46   1.6    1
(AM099705) Lutzomyia longipalpis EST clone NSFM-58e09, seque...    46   1.6    1
(AM099704) Lutzomyia longipalpis EST clone NSFM-02d02, seque...    46   1.6    1
(AM099703) Lutzomyia longipalpis EST clone NSFM-02d02, seque...    46   1.6    1
(AM098521) Lutzomyia longipalpis EST clone NSFM-133h06, sequ...    46   1.6    1
(BM273786) PfESToaa59e07.y1 Plasmodium falciparum 3D7 gameto...    46   1.6    1
(CP001139) Vibrio fischeri MJ11 chromosome I, complete seque...    46   1.6    1
(CP000776) Campylobacter hominis ATCC BAA-381, complete genome.    46   1.6    1
(CP000020) Vibrio fischeri ES114 chromosome I, complete sequ...    46   1.6    1
(AC177306) Strongylocentrotus purpuratus clone R3-46B7, WORK...    34   1.7    7
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    34   1.9    13
(AC177775) Strongylocentrotus purpuratus clone R3-1002L5, WO...    32   2.0    7
(AE017245) Mycoplasma synoviae 53, complete genome.                34   2.1    15
(AC184393) Strongylocentrotus purpuratus clone R3-3101I17, W...    36   2.2    6
(AC006936) Drosophila melanogaster, chromosome 3R, region 93...    40   2.2    4
(DQ471386) Paracantha genitilis 16S ribosomal RNA gene, part...    38   2.4    3
(ER560762) 1093015743976 Global-Ocean-Sampling_GS-36-01-01-2...    28   2.5    4
(FJ025405) Peckia gulo 12S ribosomal RNA gene, partial seque...    36   2.6    2
(AP007339) Lotus japonicus genomic DNA, chromosome 1, clone:...    38   2.6    3
(CP000685) Flavobacterium johnsoniae UW101, complete genome.       36   2.8    16
(CU407055) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   3.1    6
(AC158861) Bos taurus clone CH240-97D11, WORKING DRAFT SEQUE...    34   3.2    2
(AC149749) Bos taurus clone CH240-290A20, WORKING DRAFT SEQU...    34   3.2    2
(BX005458) Zebrafish DNA sequence from clone CH211-173L10 in...    34   3.2    2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    32   3.3    14
(EJ977352) 1093022129235 Global-Ocean-Sampling_GS-30-02-01-1...    36   3.3    2
(AM435115) Vitis vinifera contig VV78X016927.6, whole genome...    36   3.4    3
(AC109859) Rattus norvegicus clone CH230-27I8, *** SEQUENCIN...    40   3.4    3
(CW828584) Ynhw11865 HW-YUBAC Bos taurus genomic clone HW-YU...    34   3.5    3
(EU286785) Manduca sexta mitochondrion, complete genome.           38   3.7    2
(CZ536524) SRAA-aad03g06.b1 Strongyloides ratti whole genome...    36   3.7    2
(EJ801916) 1093017433117 Global-Ocean-Sampling_GS-30-02-01-1...    32   3.7    3
(AM295250) Staphylococcus carnosus subsp. carnosus TM300 com...    34   3.8    19
(AM465462) Vitis vinifera contig VV78X037541.4, whole genome...    32   3.9    2
(AC170577) Bos taurus clone CH240-195D1, WORKING DRAFT SEQUE...    38   3.9    4
(CP000409) Rickettsia canadensis str. McKiel, complete genome.     34   4.0    15
(CW424879) fsbb001f135g17k0 Sorghum methylation filtered lib...    32   4.0    3
(EJ794907) 1093017395677 Global-Ocean-Sampling_GS-30-02-01-1...    32   4.0    3
(CZ987985) 202867 Tomato MboI BAC Library Solanum lycopersic...    38   4.1    2
(CU179697) M.truncatula DNA sequence from clone MTH2-63I19 o...    32   4.1    6
(ER510172) 1093015440082 Global-Ocean-Sampling_GS-35-01-01-1...    34   4.1    2
(EK010807) 1092955173968 Global-Ocean-Sampling_GS-31-01-01-1...    36   4.1    3
(AC106871) Homo sapiens BAC clone RP11-361D14 from 4, comple...    38   4.1    5
(AL034557) Plasmodium falciparum MAL4P1.                           38   4.3    6
(EJ471449) 1095403413542 Global-Ocean-Sampling_GS-28-01-01-1...    32   4.3    2
(DU435815) 1098415915164 CHORI-243 Ovis aries genomic clone ...    34   4.3    2
(AC008939) Homo sapiens chromosome 5 clone CTD-2316B1, compl...    36   4.4    5
(BI815123) PfESToaa14f09.y1 Plasmodium falciparum 3D7 asexua...    38   4.4    2
(ER625426) 1093017587380 Global-Ocean-Sampling_GS-36-01-01-2...    34   4.4    2
(AC155134) Bos taurus clone CH240-41O18, WORKING DRAFT SEQUE...    40   4.5    4
(AC179775) Strongylocentrotus purpuratus clone R3-1016C04, W...    32   4.5    8
(AP007397) Lotus japonicus genomic DNA, chromosome 1, clone:...    38   4.7    3
(AC095479) Rattus norvegicus clone CH230-7K17, WORKING DRAFT...    40   4.8    5
(AC158360) Mus musculus BAC clone RP23-220E13 from chromosom...    36   4.9    6
(AF177135) Strauzia intermedia 16S ribosomal RNA gene, parti...    34   5.0    2
(AF177134) Strauzia vittigera 16S ribosomal RNA gene, partia...    34   5.0    2
(AM285303) Spiroplasma citri GII3-3X chromosome, contig Cont...    40   5.0    4
(AC187743) Pan troglodytes BAC clone CH251-550P23 from chrom...    38   5.1    5
(BX890575) Zebrafish DNA sequence from clone CH211-235C4 in ...    34   5.1    6
(CT860464) Oryza sativa Indica Group EST sequence:OSIGCRA202...    38   5.2    2
(AP006393) Lotus japonicus genomic DNA, chromosome 1, clone:...    34   5.2    4
(BX248583) Blochmannia floridanus complete genome.                 36   5.2    13
(AE001403) Plasmodium falciparum 3D7 chromosome 2 section 40...    30   5.3    5
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375...    36   5.3    17
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151...    36   5.3    17
(CU856300) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   5.5    8
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ...    36   5.7    7
(AP009247) Candidatus Vesicomyosocius okutanii HA DNA, compl...    38   5.8    13
(AC108941) Homo sapiens BAC clone RP11-736K12 from 4, comple...    36   6.0    5
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25...    36   6.3    19
(CR354398) Zebrafish DNA sequence from clone CH211-142C14 in...    44   6.5    1
(AC168046) Mus musculus chromosome 8, clone RP24-335A7, comp...    44   6.5    1
(AC167537) Mus musculus chromosome 8, clone RP23-99B10, comp...    44   6.5    1
(AC156611) Mus musculus chromosome 5, clone RP23-163P2, comp...    44   6.5    1
(AC137855) Mus musculus chromosome 16, clone RP24-444E8, com...    44   6.5    1
(AC135961) Mus musculus BAC clone RP24-494P18 from chromosom...    44   6.5    1
(AC134840) Mus musculus BAC clone RP24-365I5 from chromosome...    44   6.5    1
(AC134443) Mus musculus BAC clone RP24-107B13 from chromosom...    44   6.5    1
(AC124326) Mus musculus chromosome 16, clone RP24-463I7, com...    44   6.5    1
(AC117204) Mus musculus BAC clone RP23-256L23 from 18, compl...    44   6.5    1
(AC102475) Mus musculus chromosome 8, clone RP24-393D2, comp...    44   6.5    1
(AP010931) Solanum lycopersicum DNA, chromosome 8, clone: C0...    44   6.5    1
(AM442511) Vitis vinifera contig VV78X253581.15, whole genom...    44   6.5    1
(AM434218) Vitis vinifera contig VV78X268251.5, whole genome...    44   6.5    1
(AM423749) Vitis vinifera contig VV78X108562.12, whole genom...    44   6.5    1
(AC149577) Medicago truncatula chromosome 2 BAC clone mth2-1...    44   6.5    1
(AC069159) Arabidopsis thaliana chromosome 1 BAC F14G9 genom...    44   6.5    1
(U39676) Caenorhabditis elegans cosmid C23F12, complete sequ...    44   6.5    1
(AL133544) Human DNA sequence from clone RP1-71N10 on chromo...    44   6.5    1
(AC151201) Bos taurus clone CH240-181E5, WORKING DRAFT SEQUE...    44   6.5    1
(AC151095) Bos taurus clone CH240-132P21, WORKING DRAFT SEQU...    44   6.5    1
(CU210859) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   6.5    1
(BX957300) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   6.5    1
(AC169472) Sorex araneus clone SA_Ba-215J22, WORKING DRAFT S...    44   6.5    1
(AC167189) Mus musculus chromosome 8 clone RP24-382K4 map 8,...    44   6.5    1
(AC163401) Mus musculus chromosome 1 clone RP23-18J15 map 1,...    44   6.5    1
(AK079169) Mus musculus 12 days embryo embryonic body betwee...    44   6.5    1
(EK360867) 1095468953712 Global-Ocean-Sampling_GS-31-01-01-1...    44   6.5    1
(EJ319133) 1095403339061 Global-Ocean-Sampling_GS-27-01-01-1...    44   6.5    1
(EI810633) MUGQ_CH252P259A05T7_CN530_031 CHORI-252 Vervet Mo...    44   6.5    1
(EI165849) DH035J22_R1.ab1 Brachypodium distachyon Bd21 Hind...    44   6.5    1
(EF800743) Mus musculus C57BL/6N IST11188A10BBF1 gene trap e...    44   6.5    1
(CZ537532) SRAA-aad13g09.g1 Strongyloides ratti whole genome...    44   6.5    1
(CZ532735) SRAA-aac80e03.b1 Strongyloides ratti whole genome...    44   6.5    1
(CZ528845) SRAA-aac57g02.g1 Strongyloides ratti whole genome...    44   6.5    1
(CT492254) A BAC library has been constructed from cultivar ...    44   6.5    1
(AG407274) Mus musculus molossinus DNA, clone:MSMg01-266D15....    44   6.5    1
(AG029287) Pan troglodytes DNA, clone: PTB-001F06.F.               44   6.5    1
(CO167538) FLD1_69_C03.g1_A029 Root flooded Pinus taeda cDNA...    44   6.5    1
(AI733147) om79d06.x5 NCI_CGAP_Kid3 Homo sapiens cDNA clone ...    44   6.5    1
(AA947137) om79d06.s1 NCI_CGAP_Kid3 Homo sapiens cDNA clone ...    44   6.5    1
(AC101728) Mus musculus chromosome 19, clone RP23-328I5, com...    38   6.5    5
(AC018377) Homo sapiens, clone RP11-4C16, complete sequence.       36   6.6    4
(AC180914) Strongylocentrotus purpuratus clone R3-3062I04, W...    36   6.6    4
(AC010910) Homo sapiens clone RP11-4C17, WORKING DRAFT SEQUE...    36   6.7    4
(AC027605) Homo sapiens chromosome 15 clone RP11-19E5, WORKI...    34   6.7    4
(CP001205) Borrelia burgdorferi ZS7, complete genome.              36   6.8    15
(AP009514) Solanum lycopersicum DNA, chromosome 8, clone: C0...    38   6.8    2
(CP000046) Staphylococcus aureus subsp. aureus COL, complete...    36   7.0    18
(AC197192) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    38   7.0    5
(AZ674412) ENTGA35TR Entamoeba histolytica Sheared DNA Entam...    28   7.3    4
(BA000033) Staphylococcus aureus subsp. aureus MW2 DNA, comp...    36   7.3    18
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co...    36   7.3    18
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ...    36   7.4    15
(AC098259) Rattus norvegicus clone CH230-1L5, *** SEQUENCING...    40   7.5    4
(FK709695) Red02E06M13F Red male Aedes aegypti cDNA, mRNA se...    32   7.5    3
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    32   7.6    10
(BX323800) Zebrafish DNA sequence from clone DKEYP-73A2 in l...    36   7.7    3
(AC218612) Bos taurus clone CH240-299E14, WORKING DRAFT SEQU...    38   7.8    3
(AL844509) Plasmodium falciparum chromosome 13.                    32   7.8    17
(AP009835) Lotus japonicus genomic DNA, clone: LjT33L17, TM1...    36   7.9    5
(CU929572) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   7.9    3
(AC101891) Mus musculus chromosome 3, clone RP23-468J10, com...    42   8.3    6
(AC150295) Callithrix jacchus clone CH259-365H18, WORKING DR...    40   8.4    3
(AM286280) Francisella tularensis subsp. tularensis strain F...    34   8.4    15
(AJ749949) Francisella tularensis subsp. tularensis SCHU S4 ...    34   8.4    15
(CP000976) Borrelia duttonii Ly, complete genome.                  32   8.7    15
(AF166114) Mesostigma viride chloroplast DNA, complete genome.     36   9.1    8
(Z98547) Plasmodium falciparum MAL3P3.                             36   9.4    4
(AC140929) Mus musculus BAC clone RP23-258I3 from 8, complet...    36   9.5    3
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    32   9.7    10
(AC123293) Rattus norvegicus clone CH230-244N8, WORKING DRAF...    38   9.9    5

>(BJ328288) Dictyostelium discoideum cDNA clone:dda23k14, 5' end,
           single read.
          Length = 645

 Score =  634 bits (320), Expect(3) = 0.0
 Identities = 320/320 (100%)
 Strand = Plus / Plus


Query: 102 caatattctgtaatatcattagagaaagatatcagttatttatcaaaaaatgataaatta 161
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 caatattctgtaatatcattagagaaagatatcagttatttatcaaaaaatgataaatta 161


Query: 162 atgatagagatattatttaatgcatcaaaaattgttgatgatatattttggaaacaaaca 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atgatagagatattatttaatgcatcaaaaattgttgatgatatattttggaaacaaaca 221


Query: 222 ttgggtaaaagcaaacaacaatttttagtaaattataaagataaagatattagagaatat 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ttgggtaaaagcaaacaacaatttttagtaaattataaagataaagatattagagaatat 281


Query: 282 tgttcaataaattatggaccatgggatagattaaataacgataattcatttattgatggt 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tgttcaataaattatggaccatgggatagattaaataacgataattcatttattgatggt 341


Query: 342 attggtaataaaccaccaactttaaatttttatccattggatattacagaagatgaattt 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 attggtaataaaccaccaactttaaatttttatccattggatattacagaagatgaattt 401


Query: 402 gataattttaataatagttt 421
           ||||||||||||||||||||
Sbjct: 402 gataattttaataatagttt 421

 Score =  305 bits (154), Expect(3) = 0.0
 Identities = 154/154 (100%)
 Strand = Plus / Plus


Query: 430 gttcatatactgttttaagaagagataatggtcaaagtaaaaatttaaaatgtatttggt 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gttcatatactgttttaagaagagataatggtcaaagtaaaaatttaaaatgtatttggt 489


Query: 490 ataatcaagaatataaaactgaagtaatgaaaatatcaaatttattaatgaaagcatcaa 549
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ataatcaagaatataaaactgaagtaatgaaaatatcaaatttattaatgaaagcatcaa 549


Query: 550 attattcaagtgataaaggatttaaagaatattt 583
           ||||||||||||||||||||||||||||||||||
Sbjct: 550 attattcaagtgataaaggatttaaagaatattt 583

 Score =  105 bits (53), Expect(3) = 0.0
 Identities = 53/53 (100%)
 Strand = Plus / Plus


Query: 592 gatcaattgctttatcaaatgatcaatattatgatagtgatataacatggatg 644
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gatcaattgctttatcaaatgatcaatattatgatagtgatataacatggatg 644

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 853,727,735
Number of extensions: 58410623
Number of successful extensions: 5377760
Number of sequences better than 10.0: 246
Length of query: 644
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 620
Effective length of database: 99,340,224,878
Effective search space: 61590939424360
Effective search space used: 61590939424360
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U02967-1 (Contig-U02967-1Q) /CSM_Contig/Contig-U02967-1Q.Seq.d
         (644 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001103_3418(CP001103|pid:none) Alteromonas macleodii 'Deep eco...   161   2e-38
CR954246_2318(CR954246|pid:none) Pseudoalteromonas haloplanktis ...   158   1e-37
AE017340_2111(AE017340|pid:none) Idiomarina loihiensis L2TR, com...   152   6e-36
CP000388_1042(CP000388|pid:none) Pseudoalteromonas atlantica T6c...   139   9e-32
CP000821_2233(CP000821|pid:none) Shewanella sediminis HAW-EB3, c...    99   1e-19
CP001032_2209(CP001032|pid:none) Opitutus terrae PB90-1, complet...    96   1e-18
CP000251_481(CP000251|pid:none) Anaeromyxobacter dehalogenans 2C...    93   6e-18
CP001359_507(CP001359|pid:none) Anaeromyxobacter dehalogenans 2C...    91   2e-17
CP000360_4221(CP000360|pid:none) Acidobacteria bacterium Ellin34...    89   1e-16
CP000473_984(CP000473|pid:none) Solibacter usitatus Ellin6076, c...    80   4e-14
CP000360_3443(CP000360|pid:none) Acidobacteria bacterium Ellin34...    80   4e-14
AM746676_6510(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    74   4e-12
AC010793_11(AC010793|pid:none) Genomic sequence for Arabidopsis ...    53   9e-06
AL844505_266(AL844505|pid:none) Plasmodium falciparum 3D7 chromo...    42   0.015
AM910985_136(AM910985|pid:none) Plasmodium knowlesi strain H chr...    39   0.13
AL844509_369(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    39   0.17
CP000937_1378(CP000937|pid:none) Francisella philomiragia subsp....    37   0.38
CP001139_1661(CP001139|pid:none) Vibrio fischeri MJ11 chromosome...    37   0.49
EU489821_2(EU489821|pid:none) Francisella philomiragia subsp. ph...    36   0.84
CP000576_925(CP000576|pid:none) Prochlorococcus marinus str. MIT...    36   0.84
(Q35905) RecName: Full=Ribosomal protein VAR1, mitochondrial;  &...    36   0.84
CP000551_815(CP000551|pid:none) Prochlorococcus marinus str. AS9...    36   0.84
EU016580_39(EU016580|pid:none) Uncultured marine microorganism H...    36   0.84
EU492905_2(EU492905|pid:none) Francisella piscicida strain GM221...    36   0.84
AL844508_86(AL844508|pid:none) Plasmodium falciparum 3D7 chromos...    36   1.1
AE014185_262(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    35   1.4
BX538353_105(BX538353|pid:none) Cryptosporidium parvum chromosom...    35   1.9
(Q5HTR3) RecName: Full=5-methyltetrahydropteroyltriglutamate--ho...    35   1.9
(A8FMQ7) RecName: Full=5-methyltetrahydropteroyltriglutamate--ho...    35   1.9
(A1W0I5) RecName: Full=5-methyltetrahydropteroyltriglutamate--ho...    35   1.9
AP008207_2676(AP008207|pid:none) Oryza sativa (japonica cultivar...    35   1.9
AK102133_1(AK102133|pid:none) Oryza sativa Japonica Group cDNA c...    35   1.9
FB882677_1(FB882677|pid:none) Sequence 101950 from Patent WO2008...    35   1.9
CR382134_89(CR382134|pid:none) Debaryomyces hansenii strain CBS7...    35   1.9
CP000233_1498(CP000233|pid:none) Lactobacillus salivarius UCC118...    35   2.4
CP001301_1(CP001301|pid:none) Borrelia garinii PBr plasmid PBr_l...    35   2.4
AE014187_691(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.4
AL844507_87(AL844507|pid:none) Plasmodium falciparum 3D7 chromos...    35   2.4
AE017263_24(AE017263|pid:none) Mesoplasma florum L1 complete gen...    35   2.4
AL035475_48(AL035475|pid:none) Plasmodium falciparum MAL4P2.  &A...    35   2.4
AE016830_732(AE016830|pid:none) Enterococcus faecalis V583, comp...    34   3.2
AL844509_222(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    34   3.2
AL844506_233(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    34   4.2
CP001357_743(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ...    34   4.2
AJ248286_6(AJ248286|pid:none) Pyrococcus abyssi complete genome;...    34   4.2
AL844503_32(AL844503|pid:none) Plasmodium falciparum 3D7 chromos...    33   5.4
AL034557_32(AL034557|pid:none) Plasmodium falciparum MAL4P1.           33   5.4
AE017245_319(AE017245|pid:none) Mycoplasma synoviae 53, complete...    33   5.4
CR940353_538(CR940353|pid:none) Theileria annulata strain Ankara...    33   5.4
AL844505_76(AL844505|pid:none) Plasmodium falciparum 3D7 chromos...    33   7.1
CP000246_1831(CP000246|pid:none) Clostridium perfringens ATCC 13...    33   7.1
AC116957_94(AC116957|pid:none) Dictyostelium discoideum chromoso...    33   7.1
DQ453159_38(DQ453159|pid:none) Geobacillus virus E2, complete ge...    33   7.1
AY547670_1(AY547670|pid:none) Solanum tuberosum clone 1116 R1 (R...    33   7.1
AE015927_1642(AE015927|pid:none) Clostridium tetani E88, complet...    33   7.1
AE014187_369(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    33   7.1
AE014188_356(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    33   7.1
AY547669_1(AY547669|pid:none) Solanum tuberosum clone 1104 R1 (R...    33   9.3
AE015927_2260(AE015927|pid:none) Clostridium tetani E88, complet...    33   9.3
AE014187_469(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    33   9.3
AE014186_214(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...    33   9.3
CP000679_195(CP000679|pid:none) Caldicellulosiruptor saccharolyt...    33   9.3
CP001107_2914(CP001107|pid:none) Eubacterium rectale ATCC 33656,...    33   9.3
AE014188_245(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    33   9.3
CP000743_108(CP000743|pid:none) Methanococcus aeolicus Nankai-3,...    33   9.3
EU677193_6(EU677193|pid:none) Oedogonium cardiacum strain SAG 57...    33   9.3

>CP001103_3418(CP001103|pid:none) Alteromonas macleodii 'Deep
           ecotype', complete genome.
          Length = 564

 Score =  161 bits (407), Expect = 2e-38
 Identities = 79/180 (43%), Positives = 117/180 (65%)
 Frame = +3

Query: 105 YSVISLEKDISYLSKNDKLMIEILFNASKIVDDIFWKQTLGKSKQQFLVNYKDKDIREYC 284
           Y  I L  D+S+LS N   M+ +L +ASKI+DD+FWKQ   + K  FL +  D+D+R +
Sbjct: 56  YHGIDLTSDLSHLSDNQHKMLSLLIDASKIMDDLFWKQAFFEDKDVFLSSIDDEDVRHFA 115

Query: 285 SINYGPWDRLNNDNSFIDGIGNKPPTLNFYPLDITEDEFDNFNNSLKKSSYTVLRRDNGQ 464
           +INYGPWDRLN D  FI G  +K P   FYP DI + EF   +   K+  Y++++RD  +
Sbjct: 116 AINYGPWDRLNGDTPFISGYDDKAPGAEFYPHDIDKAEFATASFEDKQGLYSMVKRD--E 173

Query: 465 SKNLKCIWYNQEYKTEVMKISNLLMKASNYSSDKGFKEYLKKRSIALSNDQYYDSDITWM 644
           + NL  + Y++ +K+E+MK S+LL KAS  + D+ FK+YL+ R+ AL ++ Y  SD+ WM
Sbjct: 174 AGNLYSVPYSEAFKSELMKASDLLKKASELAEDESFKQYLQLRAEALLSNDYLASDMAWM 233

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 705,068,147
Number of extensions: 12110487
Number of successful extensions: 38638
Number of sequences better than 10.0: 67
Number of HSP's gapped: 38589
Number of HSP's successfully gapped: 70
Length of query: 214
Length of database: 1,051,180,864
Length adjustment: 123
Effective length of query: 91
Effective length of database: 653,084,107
Effective search space: 59430653737
Effective search space used: 59430653737
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

 psg: 1.02  gvh: 0.76  alm: 0.42  top: 0.47  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: extracellular, including cell wall
	 12.0 %: nuclear
	 12.0 %: endoplasmic reticulum
	  8.0 %: mitochondrial
	  8.0 %: vacuolar
	  4.0 %: cytoplasmic

>> prediction for Contig-U02967-1 is exc