| Contig-U15272-1 |
| Contig ID |
Contig-U15272-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1134 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
3225638 |
| End point |
3224504 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
15 |
| Number of EST |
15 |
| Link to clone list |
U15272 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1.18 |
| Homology vs DNA |
Query= Contig-U15272-1 (Contig-U15272-1Q) /CSM_Contig/Contig-U15272-1Q.Seq.d
(1134 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ348027) Dictyostelium discoideum cDNA clone:dda31o22, 3' ... 1624 0.0 1
(BJ349511) Dictyostelium discoideum cDNA clone:dda36p17, 3' ... 1536 0.0 1
(BJ348132) Dictyostelium discoideum cDNA clone:dda32d12, 3' ... 1532 0.0 1
(BJ439337) Dictyostelium discoideum cDNA clone:ddv40k01, 3' ... 1314 0.0 1
(BJ404592) Dictyostelium discoideum cDNA clone:dds29c05, 3' ... 1269 0.0 1
(BJ372136) Dictyostelium discoideum cDNA clone:ddc11m12, 3' ... 1239 0.0 3
(BJ440870) Dictyostelium discoideum cDNA clone:ddv45a04, 3' ... 1225 0.0 1
(BJ355039) Dictyostelium discoideum cDNA clone:dda55f14, 3' ... 1178 0.0 1
(C83998) Dictyostelium discoideum slug cDNA, clone SLK693. 1118 0.0 2
(AU034995) Dictyostelium discoideum slug cDNA, clone SLE460. 1116 0.0 2
(BJ342648) Dictyostelium discoideum cDNA clone:dda14p20, 3' ... 1104 0.0 2
(BJ440647) Dictyostelium discoideum cDNA clone:ddv44g10, 3' ... 1082 0.0 1
(BJ401155) Dictyostelium discoideum cDNA clone:dds22g09, 3' ... 872 0.0 1
(BJ438905) Dictyostelium discoideum cDNA clone:ddv38h24, 3' ... 567 0.0 2
(C83997) Dictyostelium discoideum slug cDNA, clone SLK692. 579 0.0 3
(BJ390411) Dictyostelium discoideum cDNA clone:dds22g09, 5' ... 432 0.0 2
(AC010468) Homo sapiens chromosome 5 clone CTD-2290C20, comp... 56 0.003 1
(AC010275) Homo sapiens chromosome 5 clone CTC-499J9, comple... 56 0.003 1
(EJ363756) 1092963697933 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.048 1
(EK524271) 1095515636301 Global-Ocean-Sampling_GS-32-01-01-1... 50 0.19 1
(EK495376) 1095505155722 Global-Ocean-Sampling_GS-32-01-01-1... 50 0.19 1
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1. 34 0.36 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 40 0.39 9
(EK261139) 1095462151109 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.70 2
(AC207588) Homo sapiens FOSMID clone ABC10-44514700I14 from ... 48 0.76 1
(AC107622) Homo sapiens chromosome 3 clone RP11-638F19, comp... 48 0.76 1
(BH148418) ENTPF26TF Entamoeba histolytica Sheared DNA Entam... 48 0.76 1
(AZ538780) ENTGE28TR Entamoeba histolytica Sheared DNA Entam... 48 0.76 1
(AZ534966) ENTCM60TR Entamoeba histolytica Sheared DNA Entam... 48 0.76 1
(AG158303) Pan troglodytes DNA, clone: RP43-023H20.T7. 48 0.76 1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 38 0.87 8
(AE017263) Mesoplasma florum L1 complete genome. 38 1.3 13
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 1.3 13
(AL355101) Human chromosome 14 DNA sequence BAC R-686H21 of ... 36 1.4 6
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 34 1.5 2
(AF125971) Caenorhabditis elegans cosmid Y4C6B, complete seq... 34 1.8 5
(BH651515) BOMPU55TF BO_2_3_KB Brassica oleracea genomic clo... 36 2.0 2
(BH564343) BOHER08TF BOHE Brassica oleracea genomic clone BO... 36 2.0 2
(BH977407) odh48g05.g1 B.oleracea002 Brassica oleracea genom... 36 2.0 2
(BH448930) BOGRP62TR BOGR Brassica oleracea genomic clone BO... 36 2.1 2
(BH719310) BOHTJ14TR BO_2_3_KB Brassica oleracea genomic clo... 36 2.1 2
(BH534243) BOGIU42TF BOGI Brassica oleracea genomic clone BO... 36 2.1 2
(AC154315) Mus musculus BAC clone RP23-348I6 from chromosome... 40 2.5 5
(CR381571) Zebrafish DNA sequence from clone CH211-255P15 in... 46 3.0 1
(AC186850) Gallus gallus BAC clone CH261-17O14 from chromoso... 46 3.0 1
(AC186838) Gallus gallus BAC clone CH261-88N9 from chromosom... 46 3.0 1
(CT573509) Medicago truncatula chromosome 5 clone mth2-40e2,... 46 3.0 1
(AM470856) Vitis vinifera contig VV78X246892.7, whole genome... 46 3.0 1
(AL008970) Plasmodium falciparum MAL3P4. 46 3.0 1
(AL359079) Human DNA sequence from clone RP13-360B22 on chro... 46 3.0 1
(AC230381) Bos taurus clone CH240-510I23, WORKING DRAFT SEQU... 46 3.0 1
(AC168727) Strongylocentrotus purpuratus clone R3-3010L3, WO... 46 3.0 1
(AC167032) Bos taurus clone CH240-190A15, WORKING DRAFT SEQU... 46 3.0 1
(ER433188) 1092963786503 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.0 1
(EK335994) 1095467042184 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.0 1
(EJ400158) 1093012030972 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.0 1
(AZ541049) ENTEO22TR Entamoeba histolytica Sheared DNA Entam... 44 3.0 2
(AZ680992) ENTJO89TR Entamoeba histolytica Sheared DNA Entam... 44 3.1 2
(AZ531169) ENTDI67TF Entamoeba histolytica Sheared DNA Entam... 44 3.2 2
(CR450763) Zebrafish DNA sequence from clone CH211-180M24. 36 3.2 5
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 34 5.0 2
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 34 5.1 2
(CU467895) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.1 4
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 5.5 8
(EJ476276) 1095403444648 Global-Ocean-Sampling_GS-28-01-01-1... 34 5.9 3
(ER623236) 1093017478205 Global-Ocean-Sampling_GS-36-01-01-2... 34 6.2 3
(AI957686) fc97g01.x1 Zebrafish WashU MPIMG EST Danio rerio ... 34 6.7 3
(AB242235) Marguerite yellows phytoplasma groES, groEL, amp,... 34 7.0 2
(AB242234) Iceland poppy yellows phytoplasma groES, groEL, a... 34 7.0 2
(AB242232) Tomato yellows phytoplasma groES, groEL, amp, nad... 34 7.0 2
(AB124806) Onion yellows phytoplasma groES, groEL, amp, nadE... 34 7.0 2
(AB242237) Porcelain vine witches'-broom phytoplasma groES, ... 34 7.0 2
(AB242236) Sumac witches'-broom phytoplasma groES, groEL, am... 34 7.0 2
(AB242233) Lettuce yellows phytoplasma groES, groEL, amp, na... 34 7.0 2
(AB124810) Paulownia witches'-broom phytoplasma groES, groEL... 34 7.0 2
(AB242231) Eggplant dwarf phytoplasma groES, groEL, amp, nad... 34 7.0 2
(AB124811) Phytoplasma sp. AYBG groES, groEL, amp, nadE gene... 34 7.0 2
(AB124807) Onion yellows phytoplasma groES, groEL, amp, nadE... 34 7.0 2
(AB124808) Onion yellows phytoplasma groES, groEL, amp, nadE... 34 7.0 2
(AB124809) Mulberry dwarf phytoplasma groES, groEL, amp, nad... 34 7.0 2
(AB167357) Potato purple top phytpolasma groES, groEL, amp, ... 34 7.0 2
(AF335994) Lepidopsocid RS-2001 mitochondrion, complete genome. 34 7.1 3
(AF244540) Aster yellows phytoplasma putative hsp60 gene, pa... 34 7.1 2
(AB110271) Onion yellows phytoplasma groEL, amp, nadE genes ... 34 7.2 2
(DQ787852) Chrysanthemum yellows phytoplasma molecular chape... 34 7.3 2
(AF244541) Clover phyllody phytoplasma immunodominant membra... 34 7.4 2
(DQ515794) Paulownia witches'-broom phytoplasma antigenic me... 34 7.4 2
(EF063679) Wheat blue dwarf phytoplasma immunodominant membr... 34 7.5 2
(CZ504376) GMW2-1F20a.b1 GMW2 Glycine max genomic, genomic s... 34 7.5 2
(DB913532) Idiosepius paradoxus cDNA, clone:Ip_aB_013_M02, 5... 34 7.6 2
(AC173425) Bos taurus clone CH240-93H13, WORKING DRAFT SEQUE... 40 7.9 6
(L05498) Dictyostelium discoideum adenylyl cyclase aggregati... 36 8.2 3
(AM430199) Vitis vinifera contig VV78X228761.5, whole genome... 34 9.0 7
(FH187728) CHO_OF3086xk22r1.ab1 CHO_OF3 Nicotiana tabacum ge... 40 9.4 2
>(BJ348027) Dictyostelium discoideum cDNA clone:dda31o22, 3' end,
single read.
Length = 837
Score = 1624 bits (819), Expect = 0.0
Identities = 819/819 (100%)
Strand = Plus / Minus
Query: 303 tcatcatcaattattaataataatttcgataatagaaagaaattctttgagagattaaat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tcatcatcaattattaataataatttcgataatagaaagaaattctttgagagattaaat 770
Query: 363 gtatttataaagaaatttgtaaataatattgttgtctcttcagaagatgattggagaacc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gtatttataaagaaatttgtaaataatattgttgtctcttcagaagatgattggagaacc 710
Query: 423 attaaaaccaaagttgaaaaagctctcaaaaattgtacacctgaacaagccaaagcaatg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 attaaaaccaaagttgaaaaagctctcaaaaattgtacacctgaacaagccaaagcaatg 650
Query: 483 agaaggttagcaatgcatcttatggatccaacaaaatatattacaaccgttgaaaagaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agaaggttagcaatgcatcttatggatccaacaaaatatattacaaccgttgaaaagaga 590
Query: 543 caaggctttggtaatgaaaatctattggatgagagatctcaatacactcatttcactgca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 caaggctttggtaatgaaaatctattggatgagagatctcaatacactcatttcactgca 530
Query: 603 ccaattagaagatatatggatgtcaatattcatcgtgctctctcacttcaattgactaaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ccaattagaagatatatggatgtcaatattcatcgtgctctctcacttcaattgactaaa 470
Query: 663 gaggtggtttggagttctgatatcaccattcaaccctattgggatgaatcaagtcaagaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaggtggtttggagttctgatatcaccattcaaccctattgggatgaatcaagtcaagaa 410
Query: 723 tttactgattttaaaaaatcattacccactggtgatgatttgactcaattgtgtcaaaga 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tttactgattttaaaaaatcattacccactggtgatgatttgactcaattgtgtcaaaga 350
Query: 783 tataacgatatctcttggaagagaaaaatatctgaaaagttaaatctcctctatcttgca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tataacgatatctcttggaagagaaaaatatctgaaaagttaaatctcctctatcttgca 290
Query: 843 acctacatttgggagaaaggtccaatcttaacacctggtatcgtggttacaatgtctacc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 acctacatttgggagaaaggtccaatcttaacacctggtatcgtggttacaatgtctacc 230
Query: 903 aaacatttggttatctatctctcagagtataatctcgaagtgtcaagcgatagaagtgat 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aaacatttggttatctatctctcagagtataatctcgaagtgtcaagcgatagaagtgat 170
Query: 963 ttcctttcactctctcaacatcactcttctccaatcgacgatgatgaagaaattgaaatc 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ttcctttcactctctcaacatcactcttctccaatcgacgatgatgaagaaattgaaatc 110
Query: 1023 tctaaacaattatcagttttcctttcagttgagccatttgttttatttagaagtaattgg 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tctaaacaattatcagttttcctttcagttgagccatttgttttatttagaagtaattgg 50
Query: 1083 ttccaaaaattaaagtttcaaagtatccacctttaaact 1121
|||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ttccaaaaattaaagtttcaaagtatccacctttaaact 11
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,319,182,960
Number of extensions: 82576994
Number of successful extensions: 7017095
Number of sequences better than 10.0: 94
Length of query: 1134
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1110
Effective length of database: 100,704,341,533
Effective search space: 111781819101630
Effective search space used: 111781819101630
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.15 |
| Homology vs Protein |
Query= Contig-U15272-1 (Contig-U15272-1Q) /CSM_Contig/Contig-U15272-1Q.Seq.d
(1134 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FN357307_53(FN357307|pid:none) Schistosoma mansoni genome sequen... 54 8e-06
FN357307_54(FN357307|pid:none) Schistosoma mansoni genome sequen... 54 8e-06
(Q09568) RecName: Full=Uncharacterized ribonuclease F48E8.6; ... 54 1e-05
(Q8TF46) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 53 2e-05
BC022089_1(BC022089|pid:none) Homo sapiens DIS3 mitotic control ... 53 2e-05
BC126555_1(BC126555|pid:none) Bos taurus DIS3 mitotic control ho... 52 3e-05
(A0JN80) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 52 3e-05
CR940347_726(CR940347|pid:none) Theileria annulata strain Ankara... 51 7e-05
CP001326_20(CP001326|pid:none) Micromonas sp. RCC299 chromosome ... 49 4e-04
CP000593_78(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 48 7e-04
CP000462_678(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 47 0.001
CR954215_45(CR954215|pid:none) Ostreococcus tauri strain OTTH059... 47 0.001
CP000644_645(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 46 0.002
AY811539_1(AY811539|pid:none) Schistosoma japonicum SJCHGC07896 ... 46 0.003
CP000885_2835(CP000885|pid:none) Clostridium phytofermentans ISD... 45 0.004
(A2RV18) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 45 0.005
(Q0P4R5) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 45 0.006
(P75529) RecName: Full=Ribonuclease R; Short=RNase R; ... 45 0.006
CP000713_2217(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 44 0.011
AC012193_1(AC012193|pid:none) Arabidopsis thaliana chromosome 1 ... 44 0.014
AF012898_1(AF012898|pid:none) Candida albicans protein phosphata... 44 0.014
(Q6GN11) RecName: Full=DIS3-like exonuclease 1; EC=3.1.... 44 0.014
CP000155_1634(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 44 0.014
AP005012_8(AP005012|pid:none) Oryza sativa Japonica Group genomi... 44 0.014
BC073711_1(BC073711|pid:none) Xenopus laevis MGC83653 protein, m... 44 0.014
CP001022_2342(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 44 0.014
CP000627_2119(CP000627|pid:none) Vibrio cholerae O395 chromosome... 43 0.018
CP001048_448(CP001048|pid:none) Yersinia pseudotuberculosis PB1/... 43 0.018
CP000112_2593(CP000112|pid:none) Desulfovibrio desulfuricans G20... 43 0.018
CP000647_4505(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 43 0.024
CR382399_67(CR382399|pid:none) Plasmodium falciparum chromosome ... 43 0.024
AD0047(AD0047) ribonuclease R (EC 3.1.-.-) [imported] - Yersinia... 43 0.024
CP001229_661(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 43 0.024
CP000767_694(CP000767|pid:none) Campylobacter curvus 525.92, com... 43 0.024
AL844505_152(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 43 0.024
CP000964_4979(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 43 0.024
CP000826_436(CP000826|pid:none) Serratia proteamaculans 568, com... 43 0.024
CU640366_629(CU640366|pid:none) Podospora anserina genomic DNA c... 42 0.031
CP001390_3356(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 42 0.031
AL590443_69(AL590443|pid:none) chromosome III of strain GB-M1 of... 42 0.040
CP000792_1313(CP000792|pid:none) Campylobacter concisus 13826, c... 42 0.040
CP000284_1623(CP000284|pid:none) Methylobacillus flagellatus KT,... 42 0.040
AM286415_368(AM286415|pid:none) Yersinia enterocolitica subsp. e... 42 0.040
CR378673_270(CR378673|pid:none) Photobacterium profundum SS9; se... 42 0.052
(Q9CSH3) RecName: Full=Exosome complex exonuclease RRP44; ... 41 0.068
AL138695_5(AL138695|pid:none) Human DNA sequence from clone RP11... 41 0.068
AF330044_1(AF330044|pid:none) Homo sapiens KIAA1008 protein mRNA... 41 0.068
CP000783_181(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 41 0.068
AL080158_1(AL080158|pid:none) Homo sapiens mRNA; cDNA DKFZp434L1... 41 0.068
FP236842_506(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 41 0.068
BC056143_1(BC056143|pid:none) Homo sapiens DIS3 mitotic control ... 41 0.068
AL832266_1(AL832266|pid:none) Homo sapiens mRNA; cDNA DKFZp667L1... 41 0.068
BT015237_1(BT015237|pid:none) Drosophila melanogaster RE03681 fu... 41 0.068
BC038101_1(BC038101|pid:none) Homo sapiens DIS3 mitotic control ... 41 0.068
CP000789_84(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chro... 41 0.068
AE016795_1214(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 41 0.089
AM260525_1001(AM260525|pid:none) Bartonella tribocorum CIP 10547... 41 0.089
CP000414_1641(CP000414|pid:none) Leuconostoc mesenteroides subsp... 41 0.089
AX015901_1(AX015901|pid:none) Sequence 3 from Patent WO9950284. 41 0.089
CP000422_448(CP000422|pid:none) Pediococcus pentosaceus ATCC 257... 41 0.089
BA000037_3061(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 41 0.089
CP000447_3329(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 41 0.089
EF089400_7(EF089400|pid:none) Uncultured marine bacterium EB0_41... 41 0.089
CP000029_443(CP000029|pid:none) Staphylococcus epidermidis RP62A... 41 0.089
AJ308998_1(AJ308998|pid:none) Trypanosoma brucei RRP44 gene for ... 41 0.089
AX015910_1(AX015910|pid:none) Sequence 13 from Patent WO9950284. 41 0.089
AE015929_565(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 41 0.089
CP000142_2299(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 40 0.12
AM942759_3341(AM942759|pid:none) Proteus mirabilis strain HI4320... 40 0.12
CP001127_4300(CP001127|pid:none) Salmonella enterica subsp. ente... 40 0.12
AE017220_4244(AE017220|pid:none) Salmonella enterica subsp. ente... 40 0.12
AJ564267_1(AJ564267|pid:none) Staphylococcus aureus rnr gene for... 40 0.12
U92974_1(U92974|pid:none) Lactococcus lactis unknown gene, parti... 40 0.12
AP009351_754(AP009351|pid:none) Staphylococcus aureus subsp. aur... 40 0.12
CP000388_987(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 40 0.12
AJ564286_1(AJ564286|pid:none) Staphylococcus aureus rnr gene for... 40 0.12
AE015450_458(AE015450|pid:none) Mycoplasma gallisepticum strain ... 40 0.12
AJ938182_736(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 40 0.12
CP000316_2649(CP000316|pid:none) Polaromonas sp. JS666, complete... 40 0.15
CP000381_1031(CP000381|pid:none) Neisseria meningitidis 053442, ... 40 0.15
CR382139_868(CR382139|pid:none) Debaryomyces hansenii strain CBS... 40 0.15
CP000698_2655(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 40 0.15
CP000514_2356(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 40 0.15
CP000038_4051(CP000038|pid:none) Shigella sonnei Ss046, complete... 40 0.15
D11024_2(D11024|pid:none) Shigella flexneri vacB gene. 40 0.15
AP009179_431(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 40 0.15
AP009608_514(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 40 0.15
AP007281_389(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 40 0.15
AE014075_5154(AE014075|pid:none) Escherichia coli CFT073, comple... 40 0.15
AE017340_1931(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 40 0.15
(Q02146) RecName: Full=Ribonuclease R 2; Short=RNase R ... 40 0.15
CP000266_4023(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 40 0.15
CP000034_4062(CP000034|pid:none) Shigella dysenteriae Sd197, com... 40 0.15
CP000036_3968(CP000036|pid:none) Shigella boydii Sb227, complete... 40 0.15
AP009240_4476(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 40 0.15
AX015899_1(AX015899|pid:none) Sequence 1 from Patent WO9950284. 40 0.15
S56404(S56404;C31965;F65228) virulence-associated protein vacB h... 40 0.15
CP000425_1227(CP000425|pid:none) Lactococcus lactis subsp. cremo... 40 0.15
(Q8CI75) RecName: Full=DIS3-like exonuclease 2; EC=3.1.... 40 0.15
CP000488_480(CP000488|pid:none) Candidatus Ruthia magnifica str.... 40 0.15
CP000082_2101(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 40 0.15
AM406671_1288(AM406671|pid:none) Lactococcus lactis subsp. cremo... 40 0.15
CP000033_431(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 40 0.15
CP000247_4375(CP000247|pid:none) Escherichia coli 536, complete ... 40 0.15
BC161523_1(BC161523|pid:none) Xenopus tropicalis DIS3 mitotic co... 40 0.20
AP009247_467(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 39 0.26
AP000615_11(AP000615|pid:none) Oryza sativa Japonica Group genom... 39 0.26
BT061562_1(BT061562|pid:none) Zea mays full-length cDNA clone ZM... 39 0.26
EU890828_1(EU890828|pid:none) Escherichia coli strain TB182A put... 39 0.26
AL929355_59(AL929355|pid:none) Plasmodium falciparum strain 3D7,... 39 0.26
CP001099_1357(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 39 0.26
AB245428_1(AB245428|pid:none) Colletotrichum lagenarium ClaSSD1 ... 39 0.26
CP000057_906(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 39 0.26
CP000103_1939(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 39 0.26
CP001108_650(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 39 0.26
CP000672_1286(CP000672|pid:none) Haemophilus influenzae PittGG, ... 39 0.26
CP000724_3451(CP000724|pid:none) Alkaliphilus metalliredigens QY... 39 0.26
AE009951_1184(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 39 0.26
AE017347_244(AE017347|pid:none) Cryptococcus neoformans var. neo... 39 0.26
CP001089_1226(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 39 0.26
AM270165_115(AM270165|pid:none) Aspergillus niger contig An08c01... 39 0.26
AL844508_60(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.26
AC099739_6(AC099739|pid:none) Oryza sativa (japonica cultivar-gr... 39 0.26
CP000591_320(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 39 0.34
CR954211_343(CR954211|pid:none) Ostreococcus tauri strain OTTH05... 39 0.34
(Q17632) RecName: Full=Probable exosome complex exonuclease RRP4... 39 0.34
AE014297_3670(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.34
CP000109_1489(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 39 0.34
AY052150_1(AY052150|pid:none) Drosophila melanogaster SD10981 fu... 39 0.34
(Q9WZI1) RecName: Full=Ribonuclease R; Short=RNase R; ... 39 0.34
T18925(T18925)hypothetical protein C04G2.6 - Caenorhabditis eleg... 39 0.34
CP000140_3253(CP000140|pid:none) Parabacteroides distasonis ATCC... 39 0.34
AC007584_6(AC007584|pid:none) Arabidopsis thaliana chromosome 2 ... 39 0.34
AE017143_589(AE017143|pid:none) Haemophilus ducreyi strain 35000... 39 0.34
CP001032_2652(CP001032|pid:none) Opitutus terrae PB90-1, complet... 39 0.34
BA000043_3044(BA000043|pid:none) Geobacillus kaustophilus HTA426... 39 0.34
AF496668_1(AF496668|pid:none) Trypanosoma cruzi Rrp44p-like prot... 39 0.44
CP000916_1862(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 39 0.44
AE017125_534(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 39 0.44
CP000932_905(CP000932|pid:none) Campylobacter lari RM2100, compl... 39 0.44
(O14040) RecName: Full=Dis3-like exonuclease C2C4.07c; ... 39 0.44
CT005266_45(CT005266|pid:none) Leishmania major strain Friedlin,... 39 0.44
AM502246_30(AM502246|pid:none) Leishmania infantum chromosome 28. 39 0.44
CP001562_993(CP001562|pid:none) Bartonella grahamii as4aup, comp... 39 0.44
CP000702_207(CP000702|pid:none) Thermotoga petrophila RKU-1, com... 39 0.44
CP001357_652(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ... 39 0.44
AM502250_31(AM502250|pid:none) Leishmania infantum chromosome 32. 39 0.44
(Q8IYB7) RecName: Full=DIS3-like exonuclease 2; EC=3.1.... 39 0.44
CU459141_427(CU459141|pid:none) Acinetobacter baumannii str. AYE... 38 0.58
CP000513_571(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 38 0.58
CP000822_3553(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 38 0.58
AE017194_5197(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 38 0.58
CP001154_2553(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 38 0.58
CU928171_255(CU928171|pid:none) Kluyveromyces thermotolerans str... 38 0.58
BX571874_116(BX571874|pid:none) Photorhabdus luminescens subsp. ... 38 0.58
AM494965_46(AM494965|pid:none) Leishmania braziliensis chromosom... 38 0.58
CP000521_3340(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 38 0.58
CP000425_916(CP000425|pid:none) Lactococcus lactis subsp. cremor... 38 0.58
AM884176_649(AM884176|pid:none) Chlamydia trachomatis strain L2/... 38 0.58
AP009178_1162(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 38 0.58
CP000302_506(CP000302|pid:none) Shewanella denitrificans OS217, ... 38 0.58
CP000394_803(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 38 0.58
CU468230_429(CU468230|pid:none) Acinetobacter baumannii str. SDF... 38 0.58
CP000360_3960(CP000360|pid:none) Acidobacteria bacterium Ellin34... 38 0.58
CP000927_1494(CP000927|pid:none) Caulobacter sp. K31, complete g... 38 0.58
CP000446_3250(CP000446|pid:none) Shewanella sp. MR-4, complete g... 38 0.76
(Q0V9R3) RecName: Full=DIS3-like exonuclease 2; EC=3.1.... 38 0.76
CP001078_2716(CP001078|pid:none) Clostridium botulinum E3 str. A... 38 0.76
AM494965_34(AM494965|pid:none) Leishmania braziliensis chromosom... 38 0.76
CP000096_513(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 38 0.76
CP000922_2469(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 38 0.76
AE017198_718(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 38 0.76
DQ490056_16(DQ490056|pid:none) Lactococcus phage Q54, complete g... 38 0.76
CP000444_679(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 38 0.76
AM285303_16(AM285303|pid:none) Spiroplasma citri GII3-3X chromos... 38 0.76
CP000503_3385(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 38 0.76
CP000501_50(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 38 0.76
CP001050_1010(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 38 0.76
AE017282_1868(AE017282|pid:none) Methylococcus capsulatus str. B... 38 0.76
CP000891_733(CP000891|pid:none) Shewanella baltica OS195, comple... 38 0.76
CP000449_1277(CP000449|pid:none) Maricaulis maris MCS10, complet... 38 0.76
CP000563_3585(CP000563|pid:none) Shewanella baltica OS155, compl... 38 0.76
CP001056_2972(CP001056|pid:none) Clostridium botulinum B str. Ek... 38 0.76
CP000774_2814(CP000774|pid:none) Parvibaculum lavamentivorans DS... 38 0.76
CP000675_110(CP000675|pid:none) Legionella pneumophila str. Corb... 38 0.76
AJ309002_1(AJ309002|pid:none) Trypanosoma brucei ORF1 gene for p... 38 0.76
AE014299_3823(AE014299|pid:none) Shewanella oneidensis MR-1, com... 38 0.76
AE013598_2041(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 38 0.76
FM872307_406(FM872307|pid:none) Chlamydia trachomatis B/TZ1A828/... 38 0.76
CP001107_1481(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 38 0.76
AF447860_1(AF447860|pid:none) Methylococcus capsulatus Rnr-like ... 38 0.76
(O84402) RecName: Full=Ribonuclease R; Short=RNase R; ... 38 0.76
CP000051_417(CP000051|pid:none) Chlamydia trachomatis A/HAR-13, ... 38 0.76
CP001279_1210(CP001279|pid:none) Nautilia profundicola AmH, comp... 37 0.99
CP000282_1052(CP000282|pid:none) Saccharophagus degradans 2-40, ... 37 0.99
CP000744_5589(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 37 0.99
CU928180_555(CU928180|pid:none) Kluyveromyces thermotolerans str... 37 0.99
CP001130_1013(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, c... 37 0.99
CP000803_475(CP000803|pid:none) Francisella tularensis subsp. ho... 37 0.99
CR380954_49(CR380954|pid:none) Candida glabrata strain CBS138 ch... 37 0.99
CP001034_1978(CP001034|pid:none) Natranaerobius thermophilus JW/... 37 0.99
AE016827_473(AE016827|pid:none) Mannheimia succiniciproducens MB... 37 0.99
CU207366_3263(CU207366|pid:none) Gramella forsetii KT0803 comple... 37 0.99
CP000879_946(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 37 0.99
CP000716_1476(CP000716|pid:none) Thermosipho melanesiensis BI429... 37 0.99
AP010656_203(AP010656|pid:none) Candidatus Azobacteroides pseudo... 37 0.99
CP000915_277(CP000915|pid:none) Francisella tularensis subsp. me... 37 0.99
CP000083_4482(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 37 0.99
CP001091_1486(CP001091|pid:none) Actinobacillus pleuropneumoniae... 37 0.99
AE015924_1470(AE015924|pid:none) Porphyromonas gingivalis W83, c... 37 0.99
CP000507_3057(CP000507|pid:none) Shewanella amazonensis SB2B, co... 37 0.99
CP001101_728(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 37 0.99
AM180252_593(AM180252|pid:none) Lawsonia intracellularis PHE/MN1... 37 0.99
CU466930_864(CU466930|pid:none) Candidatus Cloacamonas acidamino... 37 0.99
AM233362_556(AM233362|pid:none) Francisella tularensis subsp. ho... 37 0.99
AE004439_1954(AE004439|pid:none) Pasteurella multocida subsp. mu... 37 0.99
AL954747_350(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 37 0.99
CP000937_1215(CP000937|pid:none) Francisella philomiragia subsp.... 37 0.99
AP009380_396(AP009380|pid:none) Porphyromonas gingivalis ATCC 33... 37 0.99
CP001184_63(CP001184|pid:none) Ureaplasma urealyticum serovar 10... 37 0.99
CP000961_4172(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 37 0.99
AE017333_3471(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 37 0.99
AJ749949_1553(AJ749949|pid:none) Francisella tularensis subsp. t... 37 0.99
CP001321_1351(CP001321|pid:none) Haemophilus parasuis SH0165, co... 37 1.3
AE015451_4814(AE015451|pid:none) Pseudomonas putida KT2440 compl... 37 1.3
CP001150_2522(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 37 1.3
AE008922_1493(AE008922|pid:none) Xanthomonas campestris pv. camp... 37 1.3
AE008923_1543(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 37 1.3
CP000438_5250(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 37 1.3
AM406671_1552(AM406671|pid:none) Lactococcus lactis subsp. cremo... 37 1.3
CP000473_5179(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 37 1.3
CP000949_4644(CP000949|pid:none) Pseudomonas putida W619, comple... 37 1.3
CP000813_2985(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 37 1.3
CP000143_2742(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 37 1.3
CR848038_234(CR848038|pid:none) Chlamydophila abortus strain S26... 37 1.3
AM295250_431(AM295250|pid:none) Staphylococcus carnosus subsp. c... 37 1.3
(P57628) RecName: Full=Ribonuclease R; Short=RNase R; ... 37 1.3
AK090419_1(AK090419|pid:none) Homo sapiens mRNA for FLJ00327 pro... 37 1.3
CP000158_2241(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 37 1.3
CP000680_636(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 37 1.3
CP000148_1370(CP000148|pid:none) Geobacter metallireducens GS-15... 37 1.3
D58421_1(D58421|pid:none) Schizosaccharomyces pombe gene for sts... 37 1.3
AM910993_115(AM910993|pid:none) Plasmodium knowlesi strain H chr... 37 1.3
CP000903_4800(CP000903|pid:none) Bacillus weihenstephanensis KBA... 37 1.3
(Q9CH00) RecName: Full=Ribonuclease R 1; Short=RNase R ... 37 1.3
AE004091_4933(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 37 1.3
AP006627_2995(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 37 1.3
FM209186_5323(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 37 1.3
CP000361_228(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 37 1.3
CP000116_608(CP000116|pid:none) Thiobacillus denitrificans ATCC ... 37 1.3
AE015925_238(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 37 1.3
CP000153_541(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 37 1.3
BA000031_1890(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 37 1.3
CP001157_740(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 37 1.3
CP000926_4904(CP000926|pid:none) Pseudomonas putida GB-1, comple... 37 1.3
CP000529_2418(CP000529|pid:none) Polaromonas naphthalenivorans C... 37 1.3
CP001161_519(CP001161|pid:none) Buchnera aphidicola str. 5A (Acy... 37 1.3
CP000931_3643(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 37 1.3
CP000851_3574(CP000851|pid:none) Shewanella pealeana ATCC 700345... 37 1.3
CP001158_517(CP001158|pid:none) Buchnera aphidicola str. Tuc7 (A... 37 1.3
BA000003_527(BA000003|pid:none) Buchnera aphidicola str. APS (Ac... 37 1.3
(O74454) RecName: Full=Protein sts5; &AL031535_11(AL031535|pid:... 37 1.3
CP001407_5018(CP001407|pid:none) Bacillus cereus 03BB102, comple... 37 1.7
CP000283_3020(CP000283|pid:none) Rhodopseudomonas palustris BisB... 37 1.7
AK029652_1(AK029652|pid:none) Mus musculus adult male testis cDN... 37 1.7
CP000524_793(CP000524|pid:none) Bartonella bacilliformis KC583, ... 37 1.7
CP000115_1706(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 37 1.7
CP001096_3473(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 37 1.7
CP000463_3351(CP000463|pid:none) Rhodopseudomonas palustris BisA... 37 1.7
BA000040_5112(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 37 1.7
CP001016_3314(CP001016|pid:none) Beijerinckia indica subsp. indi... 37 1.7
CP000113_4099(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 37 1.7
CP000472_674(CP000472|pid:none) Shewanella piezotolerans WP3, co... 37 1.7
CP001173_1167(CP001173|pid:none) Helicobacter pylori G27, comple... 37 1.7
AF174645_1(AF174645|pid:none) Brucella abortus virulence-associa... 37 1.7
CP000633_1293(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 37 1.7
CP001001_3521(CP001001|pid:none) Methylobacterium radiotolerans ... 37 1.7
CP000908_2346(CP000908|pid:none) Methylobacterium extorquens PA1... 37 1.7
CP001389_1067(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 37 1.7
(P56123) RecName: Full=Ribonuclease R; Short=RNase R; ... 37 1.7
CP001615_846(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 37 1.7
CP001298_2527(CP001298|pid:none) Methylobacterium chloromethanic... 37 1.7
CP000390_1344(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 37 1.7
CP001280_3743(CP001280|pid:none) Methylocella silvestris BL2, co... 37 1.7
CP000912_558(CP000912|pid:none) Brucella suis ATCC 23445 chromos... 37 1.7
CP001072_1226(CP001072|pid:none) Helicobacter pylori Shi470, com... 37 1.7
CP001191_1285(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 37 1.7
CP001277_284(CP001277|pid:none) Candidatus Hamiltonella defensa ... 37 1.7
CP000943_6335(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 37 1.7
CP000709_505(CP000709|pid:none) Brucella ovis ATCC 25840 chromos... 37 1.7
BX572603_41(BX572603|pid:none) Rhodopseudomonas palustris CGA009... 37 1.7
AE017355_4757(AE017355|pid:none) Bacillus thuringiensis serovar ... 37 1.7
CR380954_184(CR380954|pid:none) Candida glabrata strain CBS138 c... 37 1.7
CP000301_2213(CP000301|pid:none) Rhodopseudomonas palustris BisB... 37 1.7
CP000687_1449(CP000687|pid:none) Actinobacillus pleuropneumoniae... 37 1.7
AM910993_336(AM910993|pid:none) Plasmodium knowlesi strain H chr... 37 1.7
AM910989_33(AM910989|pid:none) Plasmodium knowlesi strain H chro... 37 1.7
CP000769_1434(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 37 1.7
CP000362_170(CP000362|pid:none) Roseobacter denitrificans OCh 11... 37 1.7
AE007869_1277(AE007869|pid:none) Agrobacterium tumefaciens str. ... 37 1.7
AM260522_224(AM260522|pid:none) Helicobacter acinonychis str. Sh... 37 1.7
CP001349_7096(CP001349|pid:none) Methylobacterium nodulans ORS 2... 37 1.7
AE008918_666(AE008918|pid:none) Brucella melitensis 16M chromoso... 37 1.7
CP000230_3193(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 37 1.7
CP001510_2192(CP001510|pid:none) Methylobacterium extorquens AM1... 37 1.7
FN392321_1071(FN392321|pid:none) Pichia pastoris GS115 chromosom... 37 1.7
AL591688_1304(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 37 1.7
CU928179_40(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 36 2.2
CP000356_1220(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 36 2.2
CR936503_1409(CR936503|pid:none) Lactobacillus sakei strain 23K ... 36 2.2
CP000728_226(CP000728|pid:none) Clostridium botulinum F str. Lan... 36 2.2
AM889285_44(AM889285|pid:none) Gluconacetobacter diazotrophicus ... 36 2.2
CP000557_2956(CP000557|pid:none) Geobacillus thermodenitrificans... 36 2.2
AM412317_230(AM412317|pid:none) Clostridium botulinum A str. ATC... 36 2.2
AM946015_512(AM946015|pid:none) Streptococcus uberis 0140J compl... 36 2.2
CP000830_15(CP000830|pid:none) Dinoroseobacter shibae DFL 12, co... 36 2.2
CP000248_1939(CP000248|pid:none) Novosphingobium aromaticivorans... 36 2.2
FM204883_1522(FM204883|pid:none) Streptococcus equi subsp. equi ... 36 2.2
CP000721_630(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 36 2.2
CP000264_356(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 36 2.2
AP007169_229(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 36 2.2
CP000607_567(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 36 2.2
FM992688_1140(FM992688|pid:none) Candida dubliniensis CD36 chrom... 36 2.2
CP000157_1223(CP000157|pid:none) Erythrobacter litoralis HTCC259... 36 2.2
CP000490_21(CP000490|pid:none) Paracoccus denitrificans PD1222 c... 36 2.2
CP000241_1192(CP000241|pid:none) Helicobacter pylori HPAG1, comp... 36 2.2
CP001098_1559(CP001098|pid:none) Halothermothrix orenii H 168, c... 36 2.2
CP000527_772(CP000527|pid:none) Desulfovibrio vulgaris subsp. vu... 36 2.2
CP000771_175(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 36 2.2
CR382139_417(CR382139|pid:none) Debaryomyces hansenii strain CBS... 36 2.2
AM180355_3246(AM180355|pid:none) Clostridium difficile 630 compl... 36 2.2
AP006716_2105(AP006716|pid:none) Staphylococcus haemolyticus JCS... 36 2.2
CP000359_457(CP000359|pid:none) Deinococcus geothermalis DSM 113... 36 2.2
AE017285_2454(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 36 2.2
AE017263_210(AE017263|pid:none) Mesoplasma florum L1 complete ge... 36 2.9
CP000448_269(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 36 2.9
AM181176_517(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 36 2.9
CP001013_2844(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 36 2.9
CR382132_572(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 36 2.9
CP001348_2200(CP001348|pid:none) Clostridium cellulolyticum H10,... 36 2.9
CP000764_3494(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 36 2.9
CP001100_2604(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 36 2.9
AE017180_1474(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 36 2.9
CP000141_289(CP000141|pid:none) Carboxydothermus hydrogenoforman... 36 2.9
CP000267_1939(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 36 2.9
CR382123_455(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 36 2.9
CP001110_1774(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 36 2.9
BA000028_2428(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 36 2.9
CU179680_209(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 36 2.9
AM746676_7443(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 36 2.9
AE015928_3076(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 36 2.9
CP001071_900(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 36 2.9
CP001132_1525(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 36 2.9
CP000259_413(CP000259|pid:none) Streptococcus pyogenes MGAS9429,... 35 3.8
BA000034_1501(BA000034|pid:none) Streptococcus pyogenes SSI-1 DN... 35 3.8
BX294147_221(BX294147|pid:none) Rhodopirellula baltica SH 1 comp... 35 3.8
AE016853_4812(AE016853|pid:none) Pseudomonas syringae pv. tomato... 35 3.8
CP000159_1492(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 35 3.8
CP000924_1335(CP000924|pid:none) Thermoanaerobacter pseudethanol... 35 3.8
AL646052_1229(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 35 3.8
AL766851_87(AL766851|pid:none) Streptococcus agalactiae NEM316 c... 35 3.8
EF583992_5(EF583992|pid:none) Uncultured haloarchaeon clone fosm... 35 3.8
CP000512_2937(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 35 3.8
AE008691_921(AE008691|pid:none) Thermoanaerobacter tengcongensis... 35 3.8
(P58301) RecName: Full=DNA double-strand break repair rad50 ATPa... 35 3.8
CU633749_1844(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 35 3.8
CP000453_575(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1... 35 3.8
AE008384_544(AE008384|pid:none) Methanosarcina mazei strain Goe1... 35 3.8
AM260479_2293(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 35 3.8
AM285304_288(AM285304|pid:none) Spiroplasma citri GII3-3X chromo... 35 3.8
(Q98QL0) RecName: Full=Ribonuclease R; Short=RNase R; ... 35 3.8
CP001011_846(CP001011|pid:none) Xylella fastidiosa M23, complete... 35 3.8
CP000487_1077(CP000487|pid:none) Campylobacter fetus subsp. fetu... 35 3.8
CP000075_579(CP000075|pid:none) Pseudomonas syringae pv. syringa... 35 3.8
CP000076_567(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co... 35 3.8
AM743169_1450(AM743169|pid:none) Stenotrophomonas maltophilia K2... 35 3.8
CP000539_2470(CP000539|pid:none) Acidovorax sp. JS42, complete g... 35 3.8
AM180088_2251(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 35 3.8
CP000416_635(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 35 4.9
AP008934_1907(AP008934|pid:none) Staphylococcus saprophyticus su... 35 4.9
CP001015_888(CP001015|pid:none) Streptococcus pneumoniae G54, co... 35 4.9
CP001357_2283(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 35 4.9
CP001033_950(CP001033|pid:none) Streptococcus pneumoniae CGSP14,... 35 4.9
CP001175_146(CP001175|pid:none) Listeria monocytogenes HCC23, co... 35 4.9
AE005672_917(AE005672|pid:none) Streptococcus pneumoniae TIGR4, ... 35 4.9
CP000024_602(CP000024|pid:none) Streptococcus thermophilus CNRZ1... 35 4.9
CP000920_898(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 35 4.9
AB1750(AB1750) exoribonuclease RNase-R homolog lin2543 [imported... 35 4.9
AL670011_20(AL670011|pid:none) Neurospora crassa DNA linkage gro... 35 4.9
AM778946_59(AM778946|pid:none) Microcystis aeruginosa PCC 7806 g... 35 4.9
CP001114_349(CP001114|pid:none) Deinococcus deserti VCD115, comp... 35 4.9
AP008955_5224(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 35 4.9
CP000699_4019(CP000699|pid:none) Sphingomonas wittichii RW1, com... 35 4.9
AE017221_554(AE017221|pid:none) Thermus thermophilus HB27, compl... 35 4.9
CP000407_1383(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 35 4.9
CP000411_1295(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 35 4.9
CP001020_847(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 35 4.9
FM211187_858(FM211187|pid:none) Streptococcus pneumoniae ATCC 70... 35 4.9
AI1380(AI1380) exoribonuclease RNase-R homolog lmo2449 [imported... 35 4.9
CP001185_1733(CP001185|pid:none) Thermosipho africanus TCF52B, c... 35 4.9
CP000251_2424(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 35 4.9
CU234118_4274(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 35 4.9
CP000304_3576(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 35 4.9
CP000890_1067(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 35 4.9
AE016828_943(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 35 4.9
BX908798_1048(BX908798|pid:none) Parachlamydia-related symbiont ... 35 4.9
AP008226_910(AP008226|pid:none) Thermus thermophilus HB8 genomic... 35 4.9
CP000285_878(CP000285|pid:none) Chromohalobacter salexigens DSM ... 35 4.9
CP000936_986(CP000936|pid:none) Streptococcus pneumoniae Hungary... 35 4.9
CP000919_868(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 35 4.9
AP008971_652(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 35 4.9
CP001614_477(CP001614|pid:none) Teredinibacter turnerae T7901, c... 35 4.9
AM263198_2397(AM263198|pid:none) Listeria welshimeri serovar 6b ... 35 4.9
AP009384_1859(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 35 4.9
AE017262_2398(AE017262|pid:none) Listeria monocytogenes str. 4b ... 35 4.9
CP001472_1920(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 35 4.9
CP000262_427(CP000262|pid:none) Streptococcus pyogenes MGAS10750... 35 6.4
AL111168_595(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 35 6.4
CP000814_588(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 35 6.4
CP000025_716(CP000025|pid:none) Campylobacter jejuni RM1221, com... 35 6.4
CP000260_415(CP000260|pid:none) Streptococcus pyogenes MGAS10270... 35 6.4
AE014133_1456(AE014133|pid:none) Streptococcus mutans UA159, com... 35 6.4
CP000842_126(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 35 6.4
AE004092_358(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 35 6.4
AY920334_3(AY920334|pid:none) Campylobacter jejuni type I restri... 35 6.4
CP000031_3253(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 35 6.4
CP000777_22(CP000777|pid:none) Leptospira biflexa serovar Patoc ... 35 6.4
AE009949_420(AE009949|pid:none) Streptococcus pyogenes MGAS8232,... 35 6.4
CP000155_5313(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 35 6.4
CP000387_1521(CP000387|pid:none) Streptococcus sanguinis SK36, c... 35 6.4
AM295007_1433(AM295007|pid:none) Streptococcus pyogenes Manfredo... 35 6.4
CP000017_413(CP000017|pid:none) Streptococcus pyogenes MGAS5005,... 35 6.4
CP000725_698(CP000725|pid:none) Streptococcus gordonii str. Chal... 35 6.4
AL844509_577(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.4
BX640430_239(BX640430|pid:none) Bordetella parapertussis strain ... 34 8.4
BX640421_259(BX640421|pid:none) Bordetella pertussis strain Toha... 34 8.4
CR954246_2902(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 34 8.4
AM114193_658(AM114193|pid:none) Uncultured methanogenic archaeon... 34 8.4
AE016814_115(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 34 8.4
>FN357307_53(FN357307|pid:none) Schistosoma mansoni genome sequence
supercontig Smp_scaff000016.
Length = 1769
Score = 54.3 bits (129), Expect = 8e-06
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Frame = +3
Query: 585 YTHFTAPIRRYMDVNIHRALSLQLTKEVVWSSDITIQPYWDESSQEFTDFKKSLPTGDDL 764
YTHFT+PIRRY D+ +HR ++ + D + P S Q D + D+
Sbjct: 1559 YTHFTSPIRRYADLMVHRQIAR------ILGCDNYVYPELQISFQSNDDSIQKDIKDSDI 1612
Query: 765 TQLCQRYNDISWK-RKISEKLNLLYLATYIWEKGPILTPGIVVTMSTKHLVIYLSEYNLE 941
L ND K R+ E L+L + + GP G V+ +S + I ++ + L
Sbjct: 1613 DLLVAWCNDRRLKARRAGEASQHLFLTACLRDYGPFYENGTVMDLSANKIRILIASFGLT 1672
Query: 942 VSSDRSDFL 968
+ ++ DFL
Sbjct: 1673 IETEIKDFL 1681
Score = 45.4 bits (106), Expect = 0.004
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 585 YTHFTAPIRRYMDVNIHRALSLQLTKEVVWSSDITIQPYWDESSQEFTDFKKSLPTGDDL 764
YTHFT+PIRRY DV +HR LS L KE ES E D+ S ++
Sbjct: 738 YTHFTSPIRRYADVIVHRQLSAILAKE--------------ESDPEKADWYLSTAFPKEM 783
Query: 765 TQL-CQRYNDISWKRKISEKL-----NLLYLATYIWEKGP 866
T + Q+ ++ +K+S +L L+ ++ E GP
Sbjct: 784 TPVELQQQAEVCNSKKLSARLAGEESAELFFVLFVKETGP 823
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,469,869,812
Number of extensions: 27839445
Number of successful extensions: 65899
Number of sequences better than 10.0: 439
Number of HSP's gapped: 65875
Number of HSP's successfully gapped: 441
Length of query: 378
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 248
Effective length of database: 630,428,194
Effective search space: 156346192112
Effective search space used: 156346192112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
4 |
| VF (FL, S) |
0 |
| AH (FL, L) |
4 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
3 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
1 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |