Contig-U15258-1 |
Contig ID |
Contig-U15258-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
no gap |
Contig length |
2331 |
Chromosome number (1..6, M) |
6 |
Chromosome length |
3595308 |
Start point |
2025265 |
End point |
2023743 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
2 |
Number of EST |
4 |
Link to clone list |
U15258 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 1.18 |
Homology vs DNA |
Query= Contig-U15258-1 (Contig-U15258-1Q) /CSM_Contig/Contig-U15258-1Q.Seq.d (2331 letters)
Database: ddbj_B 98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ410779) Dictyostelium discoideum cDNA clone:ddv1f23, 5' e... 1191 0.0 1 (BJ410056) Dictyostelium discoideum cDNA clone:ddv11e05, 5' ... 1072 0.0 2 (BJ428189) Dictyostelium discoideum cDNA clone:ddv11e05, 3' ... 579 0.0 3 (BJ428949) Dictyostelium discoideum cDNA clone:ddv1f23, 3' e... 632 0.0 2 (EH732671) CNMM5555.b1_F21.ab1 CNM(LMS) spotted knapweed Cen... 60 2e-10 2 (EL407916) CFFS569.b1_B23.ab1 CFF(LMS) safflower Carthamus t... 60 2e-10 2 (EL404168) CFFS2099.b1_F21.ab1 CFF(LMS) safflower Carthamus ... 60 2e-10 2 (EH784205) CNSS23440.b1_O03.ab1 CNS(LMS) yellow starthistle ... 60 2e-10 2 (CX069432) UCRCS08_10D08_b Parent Washington Navel Orange Ca... 56 5e-10 2 (EY668698) CS00-C1-102-066-B04-CT.F Sweet orange leaf, infec... 56 5e-10 2 (ED807384) ML__Ba0020H08r ML__Ba Mimulus lewisii genomic, ge... 46 3e-08 2 (CT575423) Pinus pinaster bud EST. 58 5e-07 2 (DR102719) STRR1_83_G10.b1_A033 Stem Response Resistant Pinu... 58 5e-07 2 (FC743403) CBBI13670.fwd CBBI Lottia gigantea 26h,37h,61h La... 68 2e-06 1 (FC724176) CBBG1964.fwd CBBG Lottia gigantea 12,15,18h embry... 68 2e-06 1 (EX918431) lj19b11.g7 Cycas sporophyll (w/o ovule) (NYBG) Cy... 68 2e-06 1 (EC772617) EST 9113 Guarana fruits cDNA library Paullinia cu... 46 1e-05 2 (BU039026) PP_LEa0001A06f Peach developing fruit mesocarp Pr... 44 3e-05 2 (EX417938) GQ03709.B7_C15 GQ037 - Shoot tip - Dormant Picea ... 50 7e-05 2 (EX364106) GQ03208.B7_B11 GQ032 - Shoot tip (Normalized libr... 50 8e-05 2 (EX368592) GQ03214.B7_H14 GQ032 - Shoot tip (Normalized libr... 50 9e-05 2 (EH715785) CNML2107.b1_F23.ab1 CNM(LMS) spotted knapweed Cen... 44 9e-05 3 (EH715780) CNML2102.b1_L21.ab1 CNM(LMS) spotted knapweed Cen... 44 9e-05 3 (EY741856) CS00-C3-705-002-C10-CT.F Sweet orange fruit, deve... 50 9e-05 2 (EH765008) CNSM11035.b1_E24.ab1 CNS(LMS) yellow starthistle ... 44 1e-04 3 (EY160434) CBTN8017.b1_B14.ab1:P Triphysaria pusilla root ti... 46 1e-04 2 (EY165730) CBTI10779.b1_E07.ab1:P Triphysaria pusilla root t... 46 1e-04 2 (DV689908) CGN-33116 Leaf Coffea canephora cDNA clone cccl18... 40 1e-04 2 (DV450863) CV02005B1B06.f1 CV02-normalized library Manihot e... 58 3e-04 2 (DW157643) CLVX9740.b1_H11.ab1 CLV(XYZ) lettuce virosa Lactu... 60 4e-04 1 (EX569269) N0619 Pisum sativum shoot apical meristem ESTs Pi... 60 4e-04 1 (EX569268) N0158 Pisum sativum shoot apical meristem ESTs Pi... 60 4e-04 1 (EE505304) FNYFDA_UP_009_C01_16MAR2004_011 Brassica seed dev... 44 4e-04 2 (FE450443) CAOS15341.fwd CAOS Selaginella moellendorffii mix... 48 5e-04 3 (EV021051) BNSCS2CT_UP_072_B12_18APR2007_094 Brassica napus ... 44 0.001 2 (EE462563) BNDH5DCT_UP_027_F10_27JAN2004_070 Brassica napus ... 44 0.001 2 (AC169510) Mus musculus BAC clone RP23-121E6 from chromosome... 46 0.001 2 (CT009532) Mouse DNA sequence from clone RP23-122B16 on chro... 46 0.001 2 (CU357020) Aphanomyces euteiches cDNA. 48 0.001 2 (DW119503) CLRY8117.b2_I13.ab1 CLR(XYZ) lettuce serriola Lac... 48 0.001 2 (BM780087) EST590663 KV2 Medicago truncatula cDNA clone pKV2... 48 0.001 2 (BM779712) EST590288 KV2 Medicago truncatula cDNA clone pKV2... 48 0.001 2 (AW690554) NF030H11ST1F1000 Developing stem Medicago truncat... 48 0.001 2 (DV130105) CV03056A1B04.f1 CV03-normalized library Euphorbia... 48 0.001 2 (BQ148883) NF083F04FL1F1042 Developing flower Medicago trunc... 48 0.001 2 (CX541382) s13dNF73G05GS040_466064 Germinating Seed Medicago... 48 0.002 2 (AW127073) M110003e GVN Medicago truncatula cDNA clone N37, ... 48 0.002 2 (DV457859) CV02025B1H12.f1 CV02-normalized library Manihot e... 58 0.002 1 (FF379647) CASL022TF CASL Manihot esculenta cDNA 5', mRNA se... 58 0.002 1 (FE967004) PLATE_T3_033_E10_01DEC2004_072 Opium poppy elicit... 58 0.002 1 (EY361322) CAWZ7661.fwd CAWZ Helobdella robusta Primary Late... 58 0.002 1 (EY345667) CAWZ14187.fwd CAWZ Helobdella robusta Primary Lat... 58 0.002 1 (AJ617173) Nicotiana plumbaginifolia cDNA-AFLP fragment, clo... 44 0.002 2 (BA000016) Clostridium perfringens str. 13 DNA, complete gen... 48 0.006 25 (CP000312) Clostridium perfringens SM101, complete genome. 34 0.006 23 (CN184205) UCRCS04_0005C13_r Ruby Orange Developing Flower c... 56 0.006 1 (FG491558) 030213KAWC005122HT (KAWC) Actinidia chinensis - a... 56 0.006 1 (CO995707) pam01-19ms1-d09 Pam01 Persea americana cDNA clone... 40 0.010 2 (AI166428) xylem.est.261 Poplar xylem Lambda ZAPII library P... 48 0.011 2 (DY651078) PU4_plate43_L06 PU4 Prunus persica cDNA similar t... 42 0.012 2 (BZ042775) lkg97b12.b1 B.oleracea002 Brassica oleracea genom... 40 0.014 2 (DT590650) wmi01-20ms2-b05 Wmi01 Welwitschia mirabilis cDNA ... 48 0.014 2 (DN496081) P035H08.5pR Populus petioles cDNA library Populus... 48 0.017 2 (CO090202) GR__Ea10A21.f GR__Ea Gossypium raimondii cDNA clo... 44 0.021 2 (ES913394) BNARO2GH_T3_005_B07_15DEC2006_061 Brassica napus ... 40 0.021 2 (EV217777) 0132885 Brassica napus Root - drought Brassica na... 40 0.021 2 (CU487217) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 54 0.025 1 (AC191504) Sorex araneus clone SA_Ba-409K1, WORKING DRAFT SE... 54 0.025 1 (EL402995) CFFS14101.b1_I22.ab1 CFF(LMS) safflower Carthamus... 54 0.025 1 (EH785219) CNSS24467.b1_E22.ab1 CNS(LMS) yellow starthistle ... 54 0.025 1 (GE597463) CCPW600.b1_O06.ab1 CCP(UWX) Globe Artichoke Cynar... 54 0.025 1 (EY106660) CAZI4856.fwd CAZI Artemisia annua normalized leaf... 54 0.025 1 (EY106659) CAZI4856.rev CAZI Artemisia annua normalized leaf... 54 0.025 1 (EY085825) CAZI17073.fwd CAZI Artemisia annua normalized lea... 54 0.025 1 (EY085824) CAZI17073.rev CAZI Artemisia annua normalized lea... 54 0.025 1 (EY074654) CAZI11372.rev CAZI Artemisia annua normalized lea... 54 0.025 1 (EY072310) CAZI10148.fwd CAZI Artemisia annua normalized lea... 54 0.025 1 (CD487161) Gm_ckr0849 Soybean induced by Salicylic Acid Glyc... 42 0.042 2 (EX389612) GQ03314.B7_P22 GQ033 - Terminal leader (Normalize... 40 0.059 2 (CQ870477) Sequence 898 from Patent WO2004074320. 40 0.060 2 (CO128709) GR__Eb25L05.r GR__Eb Gossypium raimondii cDNA clo... 50 0.063 2 (AW774483) EST333634 KV3 Medicago truncatula cDNA clone pKV3... 42 0.080 2 (EI874897) CAH1-43P22TV CAA1Ba Cicer arietinum genomic clone... 52 0.10 1 (EI873572) CAH1-41J2TV CAA1Ba Cicer arietinum genomic clone ... 52 0.10 1 (DU723482) CULL, Lupinus angustifolius P27255 Lupinus angust... 52 0.10 1 (DU723430) CULL, Lupinus angustifolius 83A:476 Lupinus angus... 52 0.10 1 (EL396445) CFFM7720.b1_O09.ab1 CFF(LMS) safflower Carthamus ... 52 0.10 1 (EU218537) Solanum lycopersicum cullin 4 (CUL4) mRNA, comple... 38 0.17 3 (CJ764759) Ipomoea nil cDNA clone:jmsf34g24, 3' end. 48 0.17 2 (BJ325402) Dictyostelium discoideum cDNA clone:dda14d08, 5' ... 42 0.18 2 (CJ769746) Ipomoea nil cDNA clone:jmsf9p10, 3' end. 48 0.20 2 (BJ577041) Ipomoea nil cDNA clone:jm33n17, 3' end, single read. 48 0.20 2 (CJ761363) Ipomoea nil cDNA clone:jmsf25k20, 3' end. 48 0.21 2 (CJ759277) Ipomoea nil cDNA clone:jmsf1l08, 3' end. 48 0.21 2 (FE485142) CAOT10394.rev CAOT Selaginella moellendorffii mix... 48 0.21 2 (EV265287) GLLAS64TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 48 0.22 2 (FE492948) CAOT5944.rev CAOT Selaginella moellendorffii mixe... 48 0.22 2 (EJ759450) 1092963114256 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.25 2 (EV096585) 0194951 Brassica napus Apical meristem Brassica n... 40 0.29 2 (EX127958) BR111788 etiolated mature leaf cDNA library KHLW ... 40 0.29 2
>(BJ410779) Dictyostelium discoideum cDNA clone:ddv1f23, 5' end, single read. Length = 610
Score = 1191 bits (601), Expect = 0.0 Identities = 610/610 (100%) Strand = Plus / Plus
Query: 1 ttttatatttagatagaacttatgttattnaaaattnaatacggttaaatnaatttggga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttttatatttagatagaacttatgttattnaaaattnaatacggttaaatnaatttggga 60
Query: 61 tttaggtttattttattttggtaataatttatcacaacaatcaaatttagaaagaaaaac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tttaggtttattttattttggtaataatttatcacaacaatcaaatttagaaagaaaaac 120
Query: 121 aatcgattcattattatattcaattagatgtgaaagagaaggtgatgaaattgatagaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aatcgattcattattatattcaattagatgtgaaagagaaggtgatgaaattgatagaga 180
Query: 181 tttaatacatagtttagttaaaatgttatcatcattaaatatttatacaaaatttgaaat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tttaatacatagtttagttaaaatgttatcatcattaaatatttatacaaaatttgaaat 240
Query: 241 tgaatttattaaagaaacaaatagattttatgatatggaaggtaatagtaagattaatga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgaatttattaaagaaacaaatagattttatgatatggaaggtaatagtaagattaatga 300
Query: 301 aattgaaacaccaatgtatttaaagtatgtttgtgaaagattaaatcaagaaggtgagag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aattgaaacaccaatgtatttaaagtatgtttgtgaaagattaaatcaagaaggtgagag 360
Query: 361 attaatgagatatttagagcaatcgacaaagaagcaattgatggcagtgttggatagaca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 attaatgagatatttagagcaatcgacaaagaagcaattgatggcagtgttggatagaca 420
Query: 421 attgatagagagacatgtggatgttatcttggagaaaggtttcaatgcaatggtgaatgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 attgatagagagacatgtggatgttatcttggagaaaggtttcaatgcaatggtgaatgg 480
Query: 481 cgataggttagaggatttaggtaaactctatcaactattgaatagcgttggtgaaattaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 cgataggttagaggatttaggtaaactctatcaactattgaatagcgttggtgaaattaa 540
Query: 541 aaagattaaagagtcatggcaaagttatatcaagcaaactggtattcaaatgttgaatga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aaagattaaagagtcatggcaaagttatatcaagcaaactggtattcaaatgttgaatga 600
Query: 601 taaagagaaa 610 |||||||||| Sbjct: 601 taaagagaaa 610
Score = 281 bits (142), Expect(2) = 1e-85 Identities = 154/158 (97%) Strand = Plus / Plus
Query: 898 agaaaggtttcaatccaatgctgaatggcaataggttagagcatttaggtaaactctatc 957 |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 453 agaaaggtttcaatgcaatggtgaatggcgataggttagaggatttaggtaaactctatc 512
Query: 958 aactattgaatagcgttggtgaaattaaaaagattaaagagtcatggcaaagttatatca 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 aactattgaatagcgttggtgaaattaaaaagattaaagagtcatggcaaagttatatca 572
Query: 1018 agcaaactggtattcaaatgttgaatgataaagagaaa 1055 |||||||||||||||||||||||||||||||||||||| Sbjct: 573 agcaaactggtattcaaatgttgaatgataaagagaaa 610
Score = 69.9 bits (35), Expect(2) = 1e-85 Identities = 62/71 (87%) Strand = Plus / Plus
Query: 826 caatcaacaaagaagcaattaatgtcaatgttgtatagtcaattgatacagaaacatgtg 885 ||||| |||||||||||||| ||| || ||||| |||| ||||||||| ||| ||||||| Sbjct: 380 caatcgacaaagaagcaattgatggcagtgttggatagacaattgatagagagacatgtg 439
Query: 886 catgttatctt 896 |||||||||| Sbjct: 440 gatgttatctt 450
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 98226423 Number of Hits to DB: 2,926,799,641 Number of extensions: 180809241 Number of successful extensions: 16299755 Number of sequences better than 10.0: 327 Length of query: 2331 Length of database: 98,766,808,389 Length adjustment: 25 Effective length of query: 2306 Effective length of database: 100,606,115,110 Effective search space: 231997701443660 Effective search space used: 231997701443660 X1: 11 (21.8 bits) S2: 23 (46.1 bits)
|
protein update |
2009. 7.15 |
Homology vs Protein |
Query= Contig-U15258-1 (Contig-U15258-1Q) /CSM_Contig/Contig-U15258-1Q.Seq.d (2331 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q54CS2) RecName: Full=Cullin-4; Short=CUL-4; AltName: ... 761 0.0 EU218537_1(EU218537|pid:none) Solanum lycopersicum cullin 4 (CUL... 422 e-116 AY084267_1(AY084267|pid:none) Arabidopsis thaliana clone 101723 ... 418 e-115 AY091113_1(AY091113|pid:none) Arabidopsis thaliana putative cull... 418 e-115 AM432295_1(AM432295|pid:none) Vitis vinifera contig VV78X168341.... 417 e-115 AC084296_4(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJN... 415 e-115 BC166184_1(BC166184|pid:none) Xenopus tropicalis cullin 4B, mRNA... 411 e-113 BC167417_1(BC167417|pid:none) Xenopus tropicalis cDNA clone IMAG... 411 e-113 AK160998_1(AK160998|pid:none) Mus musculus 15 days embryo head c... 409 e-112 AL513356_5(AL513356|pid:none) Mouse DNA sequence from clone RP23... 409 e-112 BC100244_1(BC100244|pid:none) Xenopus laevis hypothetical protei... 409 e-112 AK123688_1(AK123688|pid:none) Homo sapiens cDNA FLJ41694 fis, cl... 409 e-112 (Q13620) RecName: Full=Cullin-4B; Short=CUL-4B; 409 e-112 AC002476_3(AC002476|pid:none) Human PAC clone RP1-318C15 from Xq... 409 e-112 AY365125_1(AY365125|pid:none) Homo sapiens cullin 4B (CUL4B) mRN... 408 e-112 AK012410_1(AK012410|pid:none) Mus musculus 11 days embryo whole ... 407 e-112 BX537787_1(BX537787|pid:none) Homo sapiens mRNA; cDNA DKFZp779P1... 407 e-112 AF212995_1(AF212995|pid:none) Homo sapiens cullin CUL4B (CUL4B) ... 407 e-112 AB025620_3(AB025620|pid:none) Arabidopsis thaliana genomic DNA, ... 404 e-111 BC166799_1(BC166799|pid:none) Rattus norvegicus similar to culli... 394 e-108 AK168215_1(AK168215|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 394 e-108 (Q13619) RecName: Full=Cullin-4A; Short=CUL-4A; &AL136... 394 e-108 AB012193_1(AB012193|pid:none) Homo sapiens mRNA for cullin-4A, p... 394 e-108 BC024113_1(BC024113|pid:none) Mus musculus cullin 4A, mRNA (cDNA... 394 e-108 AY892461_1(AY892461|pid:none) Synthetic construct Homo sapiens c... 394 e-108 AK314835_1(AK314835|pid:none) Homo sapiens cDNA, FLJ95721, highl... 391 e-107 CR761985_1(CR761985|pid:none) Xenopus tropicalis finished cDNA, ... 385 e-105 BC123909_1(BC123909|pid:none) Xenopus tropicalis cullin 4A, mRNA... 385 e-105 AK296700_1(AK296700|pid:none) Homo sapiens cDNA FLJ58013 complet... 380 e-103 U58090_1(U58090|pid:none) Human Hs-cul-4A mRNA, partial cds. 366 2e-99 CP001329_598(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 360 1e-97 BC165630_1(BC165630|pid:none) Danio rerio cullin 4A, mRNA (cDNA ... 314 8e-84 BC054607_1(BC054607|pid:none) Danio rerio cullin 4A, mRNA (cDNA ... 314 8e-84 FB802427_1(FB802427|pid:none) Sequence 21700 from Patent WO20080... 309 9e-83 AE013599_593(AE013599|pid:none) Drosophila melanogaster chromoso... 305 4e-81 (Q54NZ5) RecName: Full=Cullin-3; Short=CUL-3; AltName: ... 296 3e-78 FB802391_1(FB802391|pid:none) Sequence 21664 from Patent WO20080... 286 2e-75 FB802359_1(FB802359|pid:none) Sequence 21632 from Patent WO20080... 275 4e-72 AL606454_2(AL606454|pid:none) Oryza sativa genomic DNA, chromoso... 275 4e-72 AM478489_5(AM478489|pid:none) Vitis vinifera contig VV78X092018.... 271 1e-70 AK072402_1(AK072402|pid:none) Oryza sativa Japonica Group cDNA c... 271 1e-70 AC146568_18(AC146568|pid:none) Medicago truncatula clone mth2-10... 269 4e-70 CU633900_405(CU633900|pid:none) Podospora anserina genomic DNA c... 268 5e-70 A86395(A86395) hypothetical protein T2P11.2 [imported] - Arabido... 263 2e-68 AC013289_13(AC013289|pid:none) Arabidopsis thaliana chromosome 1... 263 3e-68 AJ344541_1(AJ344541|pid:none) Arabidopsis thaliana partial mRNA ... 263 3e-68 AK230392_1(AK230392|pid:none) Arabidopsis thaliana mRNA for cull... 261 1e-67 BT069454_1(BT069454|pid:none) Zea mays full-length cDNA clone ZM... 259 4e-67 FB802477_1(FB802477|pid:none) Sequence 21750 from Patent WO20080... 256 3e-66 AE014134_2672(AE014134|pid:none) Drosophila melanogaster chromos... 252 4e-65 BT082116_1(BT082116|pid:none) Drosophila melanogaster MIP05150 f... 252 4e-65 AM484063_2(AM484063|pid:none) Vitis vinifera contig VV78X066416.... 249 2e-64 FN316912_1(FN316912|pid:none) Schistosoma japonicum isolate Anhu... 241 7e-62 FN357616_27(FN357616|pid:none) Schistosoma mansoni genome sequen... 238 7e-61 FN357616_28(FN357616|pid:none) Schistosoma mansoni genome sequen... 238 7e-61 U58091_1(U58091|pid:none) Human Hs-cul-4B mRNA, partial cds. 238 7e-61 BC010347_1(BC010347|pid:none) Mus musculus cullin 4B, mRNA (cDNA... 232 5e-59 FN357359_3(FN357359|pid:none) Schistosoma mansoni genome sequenc... 229 4e-58 (O14122) RecName: Full=Cullin-4; Short=Cul-4; &AB01702... 228 6e-58 BX842631_2(BX842631|pid:none) Neurospora crassa DNA linkage grou... 228 1e-57 CP001323_208(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 212 4e-53 AB179010_1(AB179010|pid:none) Macaca fascicularis testis cDNA cl... 209 5e-52 (Q13618) RecName: Full=Cullin-3; Short=CUL-3; &AB38392... 209 5e-52 AF062537_1(AF062537|pid:none) Homo sapiens cullin 3 mRNA, comple... 209 5e-52 AC073052_1(AC073052|pid:none) Homo sapiens BAC clone RP11-92F20 ... 209 5e-52 AB014517_1(AB014517|pid:none) Homo sapiens mRNA for KIAA0617 pro... 209 5e-52 AK299644_1(AK299644|pid:none) Homo sapiens cDNA FLJ53180 complet... 209 5e-52 U58089_1(U58089|pid:none) Human Hs-cul-3 mRNA, partial cds. 209 5e-52 BC168969_1(BC168969|pid:none) Rattus norvegicus cullin 3, mRNA (... 207 1e-51 BC077239_1(BC077239|pid:none) Xenopus laevis cullin 3, mRNA (cDN... 207 2e-51 BC135616_1(BC135616|pid:none) Xenopus tropicalis cullin 3, mRNA ... 206 2e-51 AY423034_1(AY423034|pid:none) Danio rerio cullin 3 (CUL3) mRNA, ... 206 4e-51 AK129174_1(AK129174|pid:none) Mus musculus premature mRNA for mK... 205 5e-51 (Q9JLV5) RecName: Full=Cullin-3; Short=CUL-3; &AF12973... 205 5e-51 AY337761_1(AY337761|pid:none) Homo sapiens cullin 3 isoform (CUL... 204 1e-50 (Q09760) RecName: Full=Cullin-3; Short=Cul-3; &CU32967... 202 3e-50 (Q94AH6) RecName: Full=Cullin-1; &AJ318017_1(AJ318017|pid:none)... 201 1e-49 AJ319540_1(AJ319540|pid:none) Arabidopsis thaliana partial mRNA ... 199 3e-49 FB802385_1(FB802385|pid:none) Sequence 21658 from Patent WO20080... 198 6e-49 S62405(S62405)hypothetical protein SPAC24H6.03 - fission yeast ... 193 2e-47 CU633438_499(CU633438|pid:none) Podospora anserina genomic DNA c... 192 6e-47 (O60999) RecName: Full=Cullin-1; Short=CUL-1; AltName: ... 188 7e-46 AF508033_1(AF508033|pid:none) Equus caballus cullin 4A (CUL4A) m... 188 7e-46 FB802471_1(FB802471|pid:none) Sequence 21744 from Patent WO20080... 187 1e-45 AL713629_14(AL713629|pid:none) Aspergillus fumigatus BAC AFA5C11... 187 1e-45 U58086_1(U58086|pid:none) Caenorhabditis elegans cul-4 mRNA, com... 187 2e-45 EF678052_1(EF678052|pid:none) Picea sitchensis clone WS02821_G23... 184 1e-44 CP001325_68(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 184 1e-44 AP007155_94(AP007155|pid:none) Aspergillus oryzae RIB40 genomic ... 184 1e-44 FB802393_1(FB802393|pid:none) Sequence 21666 from Patent WO20080... 184 1e-44 FN357359_1(FN357359|pid:none) Schistosoma mansoni genome sequenc... 182 6e-44 FN318267_1(FN318267|pid:none) Schistosoma japonicum isolate Anhu... 182 6e-44 AJ344533_1(AJ344533|pid:none) Nicotiana tabacum mRNA for cullin ... 181 1e-43 AB080190_1(AB080190|pid:none) Pisum sativum cul1 mRNA for cullin... 179 5e-43 AJ344535_1(AJ344535|pid:none) Nicotiana tabacum partial mRNA for... 178 9e-43 AC009525_2(AC009525|pid:none) Arabidopsis thaliana chromosome I ... 174 1e-41 BC066480_1(BC066480|pid:none) Danio rerio cullin 1a, mRNA (cDNA ... 174 1e-41 BC045445_1(BC045445|pid:none) Danio rerio cullin 1a, mRNA (cDNA ... 174 1e-41 (Q13616) RecName: Full=Cullin-1; Short=CUL-1; &(Q5R4G6... 174 1e-41 BC004836_1(BC004836|pid:none) Mus musculus cullin 1, mRNA (cDNA ... 174 1e-41 U58087_1(U58087|pid:none) Human Hs-cul-1 mRNA, complete cds. 174 1e-41 AK096163_1(AK096163|pid:none) Homo sapiens cDNA FLJ38844 fis, cl... 174 1e-41 AK164274_1(AK164274|pid:none) Mus musculus 9 days embryo whole b... 174 1e-41 FB802419_1(FB802419|pid:none) Sequence 21692 from Patent WO20080... 173 2e-41 (Q17391) RecName: Full=Cullin-3; Short=CUL-3; &AC02474... 173 3e-41 AM920437_994(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 172 4e-41 BC097675_1(BC097675|pid:none) Xenopus laevis hypothetical protei... 172 6e-41 AF136441_1(AF136441|pid:none) Mus musculus cullin 1 (Cul1) mRNA,... 172 6e-41 AM270168_143(AM270168|pid:none) Aspergillus niger contig An08c01... 171 8e-41 AC011806_19(AC011806|pid:none) Genomic Sequence For Oryza sativa... 171 1e-40 DQ466084_1(DQ466084|pid:none) Xenopus tropicalis cullin-1 mRNA, ... 171 1e-40 BC093534_1(BC093534|pid:none) Xenopus laevis hypothetical protei... 171 1e-40 T16367(T16367)hypothetical protein F45E12.3 - Caenorhabditis ele... 169 3e-40 AE017347_438(AE017347|pid:none) Cryptococcus neoformans var. neo... 169 4e-40 FB802425_1(FB802425|pid:none) Sequence 21698 from Patent WO20080... 167 2e-39 (Q9XZJ3) RecName: Full=Cullin-2; Short=CUL-2; AltName: ... 166 3e-39 AP003281_23(AP003281|pid:none) Oryza sativa Japonica Group genom... 160 3e-37 AJ344534_1(AJ344534|pid:none) Nicotiana tabacum mRNA for cullin ... 159 4e-37 DQ250017_1(DQ250017|pid:none) Petunia integrifolia subsp. inflat... 158 7e-37 AK064940_1(AK064940|pid:none) Oryza sativa Japonica Group cDNA c... 157 2e-36 AC011806_16(AC011806|pid:none) Genomic Sequence For Oryza sativa... 157 2e-36 AY724780_1(AY724780|pid:none) Camellia sinensis cullin mRNA, par... 157 2e-36 CU633897_277(CU633897|pid:none) Podospora anserina genomic DNA c... 157 2e-36 FN392320_390(FN392320|pid:none) Pichia pastoris GS115 chromosome... 155 6e-36 BC031844_1(BC031844|pid:none) Homo sapiens cullin 3, mRNA (cDNA ... 154 2e-35 FB802475_1(FB802475|pid:none) Sequence 21748 from Patent WO20080... 153 2e-35 (Q24311) RecName: Full=Cullin homolog 1; AltName: Full=Lin-19 ho... 153 2e-35 T20365(T20365)hypothetical protein D2045.6 - Caenorhabditis eleg... 152 4e-35 (Q17389) RecName: Full=Cullin-1; Short=CUL-1; AltName: ... 152 4e-35 FB802383_1(FB802383|pid:none) Sequence 21656 from Patent WO20080... 151 9e-35 AC105772_11(AC105772|pid:none) Oryza sativa (japonica cultivar-g... 150 2e-34 AE017356_115(AE017356|pid:none) Cryptococcus neoformans var. neo... 144 1e-32 AB016896_1(AB016896|pid:none) Schizosaccharomyces pombe pcu1+ ge... 142 7e-32 CR382130_516(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 141 9e-32 FB802423_1(FB802423|pid:none) Sequence 21696 from Patent WO20080... 140 2e-31 BC025902_1(BC025902|pid:none) Mus musculus cullin 2, mRNA (cDNA ... 139 6e-31 AK016520_1(AK016520|pid:none) Mus musculus adult male testis cDN... 139 6e-31 EU586194_1(EU586194|pid:none) Malus x domestica cultivar Fuji cu... 139 6e-31 AK220287_1(AK220287|pid:none) Mus musculus mRNA for mKIAA4106 pr... 139 6e-31 BC059348_1(BC059348|pid:none) Xenopus laevis hypothetical protei... 137 2e-30 U83410_1(U83410|pid:none) Human CUL-2 (cul-2) mRNA, complete cds. 135 7e-30 AL392046_1(AL392046|pid:none) Human DNA sequence from clone RP11... 135 7e-30 U58088_1(U58088|pid:none) Human Hs-cul-2 mRNA, partial cds. 135 7e-30 AL392046_3(AL392046|pid:none) Human DNA sequence from clone RP11... 135 7e-30 Z92822_4(Z92822|pid:none) Caenorhabditis elegans Cosmid ZK520, c... 132 6e-29 AE014134_3634(AE014134|pid:none) Drosophila melanogaster chromos... 130 2e-28 FN357586_5(FN357586|pid:none) Schistosoma mansoni genome sequenc... 130 2e-28 Z92822_7(Z92822|pid:none) Caenorhabditis elegans Cosmid ZK520, c... 125 5e-27 U58084_1(U58084|pid:none) Caenorhabditis elegans cul-2 mRNA, com... 124 1e-26 FN392319_628(FN392319|pid:none) Pichia pastoris GS115 chromosome... 120 3e-26 AF513243_1(AF513243|pid:none) Equus caballus cullin 4B (CUL4B) m... 120 3e-25 CR382127_77(CR382127|pid:none) Yarrowia lipolytica strain CLIB12... 115 7e-24 CU928169_354(CU928169|pid:none) Kluyveromyces thermotolerans str... 112 5e-23 FM992695_41(FM992695|pid:none) Candida dubliniensis CD36 chromos... 112 8e-23 CR380956_393(CR380956|pid:none) Candida glabrata strain CBS138 c... 111 1e-22 (Q9JJ31) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 111 1e-22 CR382135_496(CR382135|pid:none) Debaryomyces hansenii strain CBS... 111 1e-22 CR382126_238(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 110 3e-22 (Q93034) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 109 5e-22 X81882_1(X81882|pid:none) H.sapiens mRNA for for vasopressin act... 109 5e-22 AK003679_1(AK003679|pid:none) Mus musculus 18-day embryo whole b... 109 5e-22 (Q29425) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 109 5e-22 AF017061_1(AF017061|pid:none) Homo sapiens vasopressin-activated... 109 5e-22 AK031955_1(AK031955|pid:none) Mus musculus adult male medulla ob... 104 2e-20 FB802421_1(FB802421|pid:none) Sequence 21694 from Patent WO20080... 100 6e-20 AP008209_2850(AP008209|pid:none) Oryza sativa (japonica cultivar... 102 8e-20 AK164640_1(AK164640|pid:none) Mus musculus 13 days embryo stomac... 102 8e-20 CU928175_388(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 100 2e-19 DQ431854_1(DQ431854|pid:none) Oryza sativa cullin mRNA, partial ... 100 3e-19 FM992690_154(FM992690|pid:none) Candida dubliniensis CD36 chromo... 97 4e-19 T27884(T27884)hypothetical protein ZK520.4 - Caenorhabditis eleg... 100 4e-19 C88618(C88618)protein ZK520.4 [imported] - Caenorhabditis elegans 100 4e-19 AE014297_4483(AE014297|pid:none) Drosophila melanogaster chromos... 98 1e-18 (P53202) RecName: Full=Cullin-3; AltName: Full=Cullin-B; &AY387... 98 2e-18 T28043(T28043)hypothetical protein ZK856.1 - Caenorhabditis eleg... 97 2e-18 CR382136_670(CR382136|pid:none) Debaryomyces hansenii strain CBS... 96 4e-18 AK117909_1(AK117909|pid:none) Arabidopsis thaliana At1g02980 mRN... 93 4e-17 CR382123_789(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 93 4e-17 AE016819_731(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 90 4e-16 AK038873_1(AK038873|pid:none) Mus musculus adult male hypothalam... 85 1e-14 BC154320_1(BC154320|pid:none) Danio rerio cullin 5, mRNA (cDNA c... 80 3e-13 BC057475_1(BC057475|pid:none) Danio rerio cullin 5, mRNA (cDNA c... 79 1e-12 FN357424_5(FN357424|pid:none) Schistosoma mansoni genome sequenc... 79 1e-12 AY809822_1(AY809822|pid:none) Schistosoma japonicum SJCHGC05790 ... 77 3e-12 AC159451_26(AC159451|pid:none) Trypanosoma brucei chromosome 8 c... 75 1e-11 AL844505_293(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 74 2e-11 FM992688_565(FM992688|pid:none) Candida dubliniensis CD36 chromo... 74 2e-11 CR860407_1(CR860407|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 70 3e-10 AK166251_1(AK166251|pid:none) Mus musculus mammary gland RCB-052... 70 4e-10 FN392319_1406(FN392319|pid:none) Pichia pastoris GS115 chromosom... 69 6e-10 AM910993_191(AM910993|pid:none) Plasmodium knowlesi strain H chr... 69 1e-09 FN357969_1(FN357969|pid:none) Schistosoma mansoni genome sequenc... 67 2e-09 AK003885_1(AK003885|pid:none) Mus musculus 18-day embryo whole b... 67 3e-09 AM502243_134(AM502243|pid:none) Leishmania infantum chromosome 25. 67 4e-09 AF126814_1(AF126814|pid:none) Strongyloides stercoralis cullin-l... 65 8e-09 AY223095_1(AY223095|pid:none) Schistosoma japonicum clone ZZD134... 65 1e-08 CT005272_316(CT005272|pid:none) Leishmania major strain Friedlin... 65 1e-08 AM502234_128(AM502234|pid:none) Leishmania infantum chromosome 16. 65 1e-08 BC095589_1(BC095589|pid:none) Danio rerio cullin 1b, mRNA (cDNA ... 64 2e-08 CT005255_128(CT005255|pid:none) Leishmania major strain Friedlin... 64 2e-08 AM502242_168(AM502242|pid:none) Leishmania infantum chromosome 24. 64 3e-08 CT005264_131(CT005264|pid:none) Leishmania major strain Friedlin... 63 4e-08 BT052950_1(BT052950|pid:none) Medicago truncatula clone MTYFL_FM... 61 2e-07 CT005263_229(CT005263|pid:none) Leishmania major strain Friedlin... 61 2e-07 AC159411_30(AC159411|pid:none) Trypanosoma brucei chromosome 3 c... 61 2e-07 AL590447_86(AL590447|pid:none) chromosome VII of strain GB-M1 of... 60 4e-07 AM494961_237(AM494961|pid:none) Leishmania braziliensis chromoso... 60 5e-07 EU489518_1(EU489518|pid:none) Vitis vinifera cullin 4 (cul4) mRN... 52 3e-05 FN357443_20(FN357443|pid:none) Schistosoma mansoni genome sequen... 50 5e-04 EU441366_1(EU441366|pid:none) Xenopus borealis clone Cullin3.a c... 48 0.002 CU928180_471(CU928180|pid:none) Kluyveromyces thermotolerans str... 47 0.002 AP008218_551(AP008218|pid:none) Oryza sativa (japonica cultivar-... 47 0.003 AM910996_572(AM910996|pid:none) Plasmodium knowlesi strain H chr... 47 0.003 FN358401_1(FN358401|pid:none) Schistosoma mansoni genome sequenc... 47 0.003 AP003246_32(AP003246|pid:none) Oryza sativa Japonica Group genom... 46 0.005 AP007155_281(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 46 0.007 AM920437_972(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 45 0.012 AY058717_1(AY058717|pid:none) Drosophila melanogaster LD45730 fu... 44 0.026 AE013599_3986(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.026 BC166796_1(BC166796|pid:none) Rattus norvegicus anaphase promoti... 44 0.034 BC107471_1(BC107471|pid:none) Rattus norvegicus anaphase promoti... 44 0.034 CP000867_1319(CP000867|pid:none) Methanococcus maripaludis C6, c... 44 0.034 AE014296_2364(AE014296|pid:none) Drosophila melanogaster chromos... 43 0.045 S44845(S44845)K06H7.5 protein - Caenorhabditis elegans 43 0.045 AB037827_1(AB037827|pid:none) Homo sapiens mRNA for KIAA1406 pro... 43 0.045 AM270238_6(AM270238|pid:none) Aspergillus niger contig An11c0210... 43 0.045 BC001579_1(BC001579|pid:none) Homo sapiens anaphase promoting co... 43 0.045 BX950229_1397(BX950229|pid:none) Methanococcus maripaludis strai... 43 0.045 BC027351_1(BC027351|pid:none) Mus musculus anaphase promoting co... 42 0.13 AK154465_1(AK154465|pid:none) Mus musculus NOD-derived CD11c +ve... 42 0.13 AK030306_1(AK030306|pid:none) Mus musculus 11 days pregnant adul... 41 0.22 CP000742_643(CP000742|pid:none) Methanococcus vannielii SB, comp... 41 0.22 AK080305_1(AK080305|pid:none) Mus musculus 3 days neonate thymus... 41 0.22 CP001557_30(CP001557|pid:none) Borrelia burgdorferi 29805 plasmi... 40 0.50 CP000673_1353(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 39 0.65 AY675111_1(AY675111|pid:none) Ostreococcus tauri anaphase promot... 39 0.65 AC150566_3(AC150566|pid:none) Medicago truncatula clone mth2-21o... 39 0.85 CP001100_725(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 39 0.85 AY815824_1(AY815824|pid:none) Schistosoma japonicum SJCHGC09488 ... 39 0.85 (B5ZAT6) RecName: Full=Seryl-tRNA synthetase; EC=6.1.1.... 39 0.85 T26969(T26969)hypothetical protein Y47H9C.9 - Caenorhabditis ele... 39 1.1 GN105678_1(GN105678|pid:none) Sequence 10459 from Patent WO20090... 39 1.1 AY138501_1(AY138501|pid:none) Plasmodium falciparum normocyte bi... 33 1.3 AF312917_1(AF312917|pid:none) Plasmodium falciparum reticulocyte... 33 1.3 AY138503_1(AY138503|pid:none) Plasmodium falciparum normocyte bi... 33 1.3 AY138502_1(AY138502|pid:none) Plasmodium falciparum normocyte bi... 33 1.3 (Q8IDX6) RecName: Full=Reticulocyte-binding protein 2 homolog a;... 33 1.3 AF312916_1(AF312916|pid:none) Plasmodium falciparum reticulocyte... 33 1.3 AY138499_1(AY138499|pid:none) Plasmodium falciparum normocyte bi... 33 1.3 CP001130_480(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 38 1.4 CP001638_2469(CP001638|pid:none) Geobacillus sp. WCH70, complete... 38 1.4 BC019661_1(BC019661|pid:none) Mus musculus cullin 5, mRNA (cDNA ... 38 1.4 AP009179_965(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 38 1.4 (Q9W420) RecName: Full=Transcription elongation factor SPT6; &A... 38 1.9 AF104400_1(AF104400|pid:none) Drosophila melanogaster SPT6 prote... 38 1.9 AF104401_1(AF104401|pid:none) Drosophila melanogaster SPT6 prote... 38 1.9 CP000679_1108(CP000679|pid:none) Caldicellulosiruptor saccharoly... 37 2.5 AX239571_1(AX239571|pid:none) Sequence 14 from Patent WO0164874. 37 2.5 AB463303_1(AB463303|pid:none) Synthetic construct DNA, clone: pF... 37 3.2 AL832338_1(AL832338|pid:none) Homo sapiens mRNA; cDNA DKFZp451K2... 37 3.2 BC143465_1(BC143465|pid:none) Homo sapiens membrane metallo-endo... 37 3.2 GN103254_1(GN103254|pid:none) Sequence 8035 from Patent WO200903... 37 3.2 (Q6PAM1) RecName: Full=Alpha-taxilin; &AK141252_1(AK141252|pid:... 37 3.2 AX239574_1(AX239574|pid:none) Sequence 17 from Patent WO0164874. 37 3.2 BC080578_1(BC080578|pid:none) Homo sapiens taxilin alpha, mRNA (... 37 3.2 BX569693_18(BX569693|pid:none) Synechococcus sp. WH8102 complete... 37 4.2 J03779_1(J03779|pid:none) Human common acute lymphoblastic leuke... 37 4.2 (P08473) RecName: Full=Neprilysin; EC=3.4.24.11; AltNam... 37 4.2 (Q61391) RecName: Full=Neprilysin; EC=3.4.24.11; AltNam... 37 4.2 CR857100_1(CR857100|pid:none) Pongo abelii mRNA; cDNA DKFZp469M0... 37 4.2 AB385522_1(AB385522|pid:none) Synthetic construct DNA, clone: pF... 37 4.2 CP000825_1451(CP000825|pid:none) Prochlorococcus marinus str. MI... 37 4.2 CR382139_561(CR382139|pid:none) Debaryomyces hansenii strain CBS... 37 4.2 BC066840_1(BC066840|pid:none) Mus musculus membrane metallo endo... 37 4.2 CR860855_1(CR860855|pid:none) Pongo abelii mRNA; cDNA DKFZp469N0... 37 4.2 CR926400_1(CR926400|pid:none) Xenopus tropicalis finished cDNA, ... 37 4.2 CU179680_131(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 37 4.2 HYRBN(A29451;I46872)neprilysin (EC 3.4.24.11) - rabbit 37 4.2 AB179113_1(AB179113|pid:none) Macaca fascicularis testis cDNA cl... 37 4.2 M81591_1(M81591|pid:none) Murine CD10 neutral endopeptidase 24.1... 37 4.2 (Q5RE69) RecName: Full=Neprilysin; EC=3.4.24.11; AltNam... 37 4.2 CP000679_2656(CP000679|pid:none) Caldicellulosiruptor saccharoly... 36 5.5 AL844504_111(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.5 AP008971_1455(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 36 5.5 (A6LU43) RecName: Full=N utilization substance protein B homolog... 36 5.5 AB180242_1(AB180242|pid:none) Clostridium difficile slpA gene fo... 36 5.5 BA000026_848(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 36 7.2 CP000923_1678(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 36 7.2 AJ504805_1(AJ504805|pid:none) Arabidopsis thaliana mRNA for SMC3... 35 9.4 BC151304_1(BC151304|pid:none) Bos taurus lamin B1, mRNA (cDNA cl... 35 9.4 AK221283_1(AK221283|pid:none) Arabidopsis thaliana mRNA for puta... 35 9.4 AL139008_4(AL139008|pid:none) Human DNA sequence from clone RP11... 35 9.4 CR932272_1(CR932272|pid:none) Centrin-binding protein, complete ... 35 9.4 AM910994_621(AM910994|pid:none) Plasmodium knowlesi strain H chr... 35 9.4 AC007290_6(AC007290|pid:none) Arabidopsis thaliana chromosome 2 ... 35 9.4 AE017354_297(AE017354|pid:none) Legionella pneumophila subsp. pn... 35 9.4 F84669(F84669)probable chromosome associated protein [imported] ... 35 9.4 CR382139_551(CR382139|pid:none) Debaryomyces hansenii strain CBS... 35 9.4
>(Q54CS2) RecName: Full=Cullin-4; Short=CUL-4; AltName: Full=Cullin-D; Length = 802
Score = 761 bits (1964), Expect(3) = 0.0 Identities = 403/478 (84%), Positives = 411/478 (85%) Frame = +3
Query: 894 LKKGFNPMLNGNRLEHLGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEXTLIQ 1073 L+KGFN M+NG+RLE LGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKE TLIQ Sbjct: 313 LEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEATLIQ 372
Query: 1074 DLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGGKR 1253 DLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGGKR Sbjct: 373 DLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGGKR 432
Query: 1254 ML*EELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTEC 1433 M EELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTEC Sbjct: 433 MSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTEC 492
Query: 1434 GTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLP 1613 GTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLP Sbjct: 493 GTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLP 552
Query: 1614 KEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFND 1793 KEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFND Sbjct: 553 KEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFND 612
Query: 1794 VIDGGELSFRDIQANTGLAIPEXXXXXXXXXXXXXDILIQKKXXXXXXXXXXXXXXXXXX 1973 VIDGGELSFRDIQANTGLAIPE DILIQKK Sbjct: 613 VIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSS 672
Query: 1974 XXXXXXXXXXXXXXKTKVIDETDTXXXXXXXXXXXXXXXVNSIQIQETVEENQKTNENII 2153 KTKVIDETDT VNSIQIQETVEENQKTNENII Sbjct: 673 ASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENII 732
Query: 2154 SDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILLKRIFM*R 2327 SDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEIL+++ ++ R Sbjct: 733 SDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILIEKEYLCR 790
Score = 37.4 bits (85), Expect(3) = 0.0 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = +1
Query: 826 QSTKKQLMSMLYSQLIQKHVHVILRK 903 QSTKKQLM++L QLI++HV VIL K Sbjct: 290 QSTKKQLMAVLDRQLIERHVDVILEK 315
Score = 23.1 bits (48), Expect(3) = 0.0 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +1
Query: 2308 KEYLCRDP 2331 KEYLCRDP Sbjct: 785 KEYLCRDP 792
Score = 506 bits (1304), Expect(2) = e-142 Identities = 258/262 (98%), Positives = 258/262 (98%) Frame = +2
Query: 38 NTVKXIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSL 217 NTVK IWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSL Sbjct: 176 NTVKSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSL 235
Query: 218 NIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQ 397 NIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQ Sbjct: 236 NIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQ 295
Query: 398 LMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQ 577 LMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQ Sbjct: 296 LMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQ 355
Query: 578 TGIQMLNDKEKEXTLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPA 757 TGIQMLNDKEKE TLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPA Sbjct: 356 TGIQMLNDKEKEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPA 415
Query: 758 ELVARFIDSKLKVGGKRML*EE 823 ELVARFIDSKLKVGGKRM EE Sbjct: 416 ELVARFIDSKLKVGGKRMSEEE 437
Score = 24.3 bits (51), Expect(2) = e-142 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +3
Query: 3 LYLDRTYVIXN 35 LYLDRTYVI N Sbjct: 164 LYLDRTYVIQN 174
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 3,069,735,028 Number of extensions: 53873098 Number of successful extensions: 153905 Number of sequences better than 10.0: 298 Number of HSP's gapped: 153120 Number of HSP's successfully gapped: 662 Length of query: 777 Length of database: 1,051,180,864 Length adjustment: 137 Effective length of query: 640 Effective length of database: 607,772,281 Effective search space: 388974259840 Effective search space used: 388974259840 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
0 |
VF (FL, S) |
2 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |