Contig-U15258-1
Contig ID Contig-U15258-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15258-1 (Contig-U15258-1Q) /CSM_Contig/Contig-U15258-1Q.Seq.d
TTTTATATTTAGATAGAACTTATGTTATTNAAAATTNAATACGGTTAAAT
NAATTTGGGATTTAGGTTTATTTTATTTTGGTAATAATTTATCACAACAA
TCAAATTTAGAAAGAAAAACAATCGATTCATTATTATATTCAATTAGATG
TGAAAGAGAAGGTGATGAAATTGATAGAGATTTAATACATAGTTTAGTTA
AAATGTTATCATCATTAAATATTTATACAAAATTTGAAATTGAATTTATT
AAAGAAACAAATAGATTTTATGATATGGAAGGTAATAGTAAGATTAATGA
AATTGAAACACCAATGTATTTAAAGTATGTTTGTGAAAGATTAAATCAAG
AAGGTGAGAGATTAATGAGATATTTAGAGCAATCGACAAAGAAGCAATTG
ATGGCAGTGTTGGATAGACAATTGATAGAGAGACATGTGGATGTTATCTT
GGAGAAAGGTTTCAATGCAATGGTGAATGGCGATAGGTTAGAGGATTTAG
GTAAACTCTATCAACTATTGAATAGCGTTGGTGAAATTAAAAAGATTAAA
GAGTCATGGCAAAGTTATATCAAGCAAACTGGTATTCAAATGTTGAATGA
TAAAGAGAAAGAGNCAACGTTAATTCAAGATCTTTTAGACTACAAGGACA
GATTGGATAGAATATTGAGTCAATCATTCTCAAAGAACGAATTGTTGACC
TACGCATTGAAAGAGTCATTCGAATACTTTATCAATACCAAGCAAAACAA
ACCCGCCGAATTAGTCGCAAGATTCATAGATTCAAAGCTAAAAGTTGGTG
GAAAGAGAATGCTCTAAGAGGAATTCAATCAACAAAGAAGCAATTAATGT
CAATGTTGTATAGTCAATTGATACAGAAACATGTGCATGTTATCTTAAGA
AAGGTTTCAATCCAATGCTGAATGGCAATAGGTTAGAGCATTTAGGTAAA
CTCTATCAACTATTGAATAGCGTTGGTGAAATTAAAAAGATTAAAGAGTC
ATGGCAAAGTTATATCAAGCAAACTGGTATTCAAATGTTGAATGATAAAG
AGAAAGAGNCAACGTTAATTCAAGATCTTTTAGACTACAAGGACAGATTG
GATAGAATATTGAGTCAATCATTCTCAAAGAACGAATTGTTGACCTACGC
ATTGAAAGAGTCATTCGAATACTTTATCAATACCAAGCAAAACAAACCCG
CCGAATTAGTCGCAAGATTCATAGATTCAAAGCTAAAAGTTGGTGGAAAG
AGAATGCTCTAAGAGGAATTAGAGACCGTGTTGAACAAGTCGTTGATCCT
CTTCCGTTATATTCAAGGCAAGGATGTGTTTGAAGCATTCTATAAACAAG
ATCTATCAAAACGTTTACTCTTGGATAAATCAACCTCGATCGATGCTGAG
AAATCAATGATTTCCAAATTAAAGACTGAATGTGGTACGACGTTCACTGC
AAAGTTGGAGGAGATGTTTAAAGACATCGAGTTAAGTAATGATATTATGA
ATTCATTTAGAGACTCTCCAATGACTCAGAACTTCAAATCCATAGAGATG
AATATCTATGTGTTGACCAGTGGAAATTGGCCAATACAACCTCCAATCGA
AGCTACACTACCAAAAGAGTTTTTAGAGTATCAAGAAGTGTTTAACAAAT
TCTATCTATCAAAACATAATGGTAAAACTTTGAAATGGCAAAATGCTCTC
TCTTATTGTGTTTTAAAAGCAAACTTTATTCAAGGTAAAAAAGAATTATC
TGTATCACTCTTTCAAACTATTATTCTCTACCTCTTTAATGATGTTATTG
ATGGTGGTGAACTCTCTTTTAGAGATATTCAAGCAAATACTGGTTTAGCT
ATACCTGAATTAAAAAAGAATTTACTATCTTTATGTTCTTCAAAATCTGA
TATTTTAATTCAAAAGAAATCTTCTACTAGTAGTAATACTAGTAGTAATA
CAAGTAGTAATACAAGTAGTAGTGCTAGTGGTAGTGCTAGTGGTGGTGCT
AGTGGTGGTGCAACAAAAACAAAAGTAATCGATGAAACTGATACCTTTTT
ATTCAATTCAAAGTTTAGTAGTAAACTATTCAAAATCAAGGTTAACTCTA
TTCAAATTCAAGAAACTGTTGAAGAAAATCAAAAAACCAATGAAAATATC
ATTAGTGATCGTCAATATCAAGTTGATGCTGCCATTGTAAGAATTATGAA
AACCAGAAAAACTTTAGCCCATAATTTGTTAATCTCTGAATTAGTATCAC
TTTTGAAATTCCAACCAAAACCTGTGGATCTTAAAAAGAGAATAGAAATT
TTATTAAAAAGAATATTTATGTAGAGACCCT

Gap no gap
Contig length 2331
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 2025265
End point 2023743
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 4
Link to clone list U15258
List of clone(s)

est1=VFA391F,1,610
est2=VFA391X,380,1270
est3=VFF119E,1186,2331
est4=VFA391Z,1734,2331
Translated Amino Acid sequence
lyldrtyvixnxirlnxfgi*vyfilviiyhnnqi*kekqsihyyiqldvkekvmkliei
*yiv*lkcyhh*ifiqnlklnllkkqidfmiwkvivrlmklkhqci*smfvkd*ikkvrd
**di*snrqrsn*wqcwidn**rdmwmlswrkvsmqw*maig*ri*vnsiny*ialvklk
rlkshgkvissklvfkc*mikrkxqr*fkif*ttrtdwiey*vnhsqrtnc*pth*kshs
ntlsipsktnppn*sqds*iqs*klverecskrnsinkeainvnvv*sidtetcacylkk
gfnpmlngnrlehlgklyqllnsvgeikkikeswqsyikqtgiqmlndkekextliqdll
dykdrldrilsqsfsknelltyalkesfeyfintkqnkpaelvarfidsklkvggkrml*
EELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTECGTT
FTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLPKEF
LEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFNDVID
GGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASG
SASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDR
QYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILLKRIFM*rp


Translated Amino Acid sequence (All Frames)
Frame A:
fyi*ielmlxkixyg*xnlgfrfilfw**fittikfrkknnrfiiifn*m*krr**n**r
fnt*fs*nviiikylyki*n*iy*rnk*il*ygr***d**n*ntnvfkvcl*kiksrr*e
ineifraidkeaidgsvg*tidretcgcylgerfqcngewr*vrgfr*tlstie*rw*n*
kd*rvmaklyqanwysnve**rerxnvnsrsfrlqgqig*niesiilkerivdlriervi
rilyqyqakqtrrisrkihrfkakswwkenalrgiqstkkqlmsmlysqliqkhvhvilr
kvsiqc*maig*si*vnsiny*ialvklkrlkshgkvissklvfkc*mikrkxqr*fkif
*ttrtdwiey*vnhsqrtnc*pth*kshsntlsipsktnppn*sqds*iqs*klverecs
krn*rpc*tsr*sssvifkarmclkhsinkiyqnvyswinqprsmlrnq*fpn*rlnvvr
rslqswrrclktss*vmil*ihletlq*lrtsnp*r*ismc*pveigqynlqsklhyqks
f*sikkcltnsiyqnimvkl*ngkmlslivf*kqtlfkvkknylyhsfkllfstslmmll
mvvnslleifkqilv*lyln*kriyylyvlqnlif*fkrnlllvvilvviqvviqvvvlv
vvlvvvlvvvqqkqk*smklipfysiqslvvnysksrltlfkfkkllkkikkpmkislvi
vniklmlpl*el*kpekl*piic*sln*yhf*nsnqnlwilkre*kfy*keylcrdp


Frame B:
fifr*nlcyxkxntvkxiwdlglfyfgnnlsqqsnlerktidsllysirceregdeidrd
lihslvkmlsslniytkfeiefiketnrfydmegnskineietpmylkyvcerlnqeger
lmryleqstkkqlmavldrqlierhvdvilekgfnamvngdrledlgklyqllnsvgeik
kikeswqsyikqtgiqmlndkekextliqdlldykdrldrilsqsfsknelltyalkesf
eyfintkqnkpaelvarfidsklkvggkrml*eefnqqrsn*cqccivn*yrnmcmls*e
rfqsnaewq*vrafr*tlstie*rw*n*kd*rvmaklyqanwysnve**rerxnvnsrsf
rlqgqig*niesiilkerivdlriervirilyqyqakqtrrisrkihrfkakswwkenal
rgirdrveqvvdplplysrqgcv*sil*trsiktftlg*inldrc*eindfqikd*mwyd
vhckvggdv*rhrvk**yyefi*rlsndselqihrdeylcvdqwklanttsnrsyttkrv
frvsrsv*qilsikt*w*nfemakcslllcfksklysr*kriicitlsnyyslpl**cy*
ww*tlf*rysskywfsyt*ikkeftifmffki*yfnskeify***y***yk**yk**c*w
*c*wwc*wwcnknksnr*n*ylfiqfkv***tiqnqg*lysnsrnc*rksknq*kyh**s
siss*cchcknyenqknfsp*fvnl*isitfeiptktcgs*kenrnfikkniyvet


Frame C:
lyldrtyvixnxirlnxfgi*vyfilviiyhnnqi*kekqsihyyiqldvkekvmkliei
*yiv*lkcyhh*ifiqnlklnllkkqidfmiwkvivrlmklkhqci*smfvkd*ikkvrd
**di*snrqrsn*wqcwidn**rdmwmlswrkvsmqw*maig*ri*vnsiny*ialvklk
rlkshgkvissklvfkc*mikrkxqr*fkif*ttrtdwiey*vnhsqrtnc*pth*kshs
ntlsipsktnppn*sqds*iqs*klverecskrnsinkeainvnvv*sidtetcacylkk
gfnpmlngnrlehlgklyqllnsvgeikkikeswqsyikqtgiqmlndkekextliqdll
dykdrldrilsqsfsknelltyalkesfeyfintkqnkpaelvarfidsklkvggkrml*
EELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTECGTT
FTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLPKEF
LEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFNDVID
GGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASG
SASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDR
QYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILLKRIFM*rp


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15258-1 (Contig-U15258-1Q)
/CSM_Contig/Contig-U15258-1Q.Seq.d
(2331 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15258-1 (Contig-U15258-1Q) /CSM_Contig/Conti... 3780 0.0
Contig-U11867-1 (Contig-U11867-1Q) /CSM_Contig/Conti... 42 0.004
Contig-U16357-1 (Contig-U16357-1Q) /CSM_Contig/Conti... 40 0.015
Contig-U16162-1 (Contig-U16162-1Q) /CSM_Contig/Conti... 38 0.060
Contig-U15555-1 (Contig-U15555-1Q) /CSM_Contig/Conti... 38 0.060
Contig-U05074-1 (Contig-U05074-1Q) /CSM_Contig/Conti... 38 0.060
Contig-U16152-1 (Contig-U16152-1Q) /CSM_Contig/Conti... 36 0.24
Contig-U15821-1 (Contig-U15821-1Q) /CSM_Contig/Conti... 36 0.24
Contig-U15529-1 (Contig-U15529-1Q) /CSM_Contig/Conti... 36 0.24
Contig-U15230-1 (Contig-U15230-1Q) /CSM_Contig/Conti... 36 0.24

>Contig-U15258-1 (Contig-U15258-1Q) /CSM_Contig/Contig-U15258-1Q.Seq.d
Length = 2331

Score = 3780 bits (1907), Expect = 0.0
Identities = 1922/1922 (100%)
Strand = Plus / Plus


Query: 1 ttttatatttagatagaacttatgttattnaaaattnaatacggttaaatnaatttggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttatatttagatagaacttatgttattnaaaattnaatacggttaaatnaatttggga 60


Query: 61 tttaggtttattttattttggtaataatttatcacaacaatcaaatttagaaagaaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaggtttattttattttggtaataatttatcacaacaatcaaatttagaaagaaaaac 120


Query: 121 aatcgattcattattatattcaattagatgtgaaagagaaggtgatgaaattgatagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcgattcattattatattcaattagatgtgaaagagaaggtgatgaaattgatagaga 180


Query: 181 tttaatacatagtttagttaaaatgttatcatcattaaatatttatacaaaatttgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttaatacatagtttagttaaaatgttatcatcattaaatatttatacaaaatttgaaat 240


Query: 241 tgaatttattaaagaaacaaatagattttatgatatggaaggtaatagtaagattaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaatttattaaagaaacaaatagattttatgatatggaaggtaatagtaagattaatga 300


Query: 301 aattgaaacaccaatgtatttaaagtatgtttgtgaaagattaaatcaagaaggtgagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattgaaacaccaatgtatttaaagtatgtttgtgaaagattaaatcaagaaggtgagag 360


Query: 361 attaatgagatatttagagcaatcgacaaagaagcaattgatggcagtgttggatagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attaatgagatatttagagcaatcgacaaagaagcaattgatggcagtgttggatagaca 420


Query: 421 attgatagagagacatgtggatgttatcttggagaaaggtttcaatgcaatggtgaatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgatagagagacatgtggatgttatcttggagaaaggtttcaatgcaatggtgaatgg 480


Query: 481 cgataggttagaggatttaggtaaactctatcaactattgaatagcgttggtgaaattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgataggttagaggatttaggtaaactctatcaactattgaatagcgttggtgaaattaa 540


Query: 541 aaagattaaagagtcatggcaaagttatatcaagcaaactggtattcaaatgttgaatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaagattaaagagtcatggcaaagttatatcaagcaaactggtattcaaatgttgaatga 600


Query: 601 taaagagaaagagncaacgttaattcaagatcttttagactacaaggacagattggatag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taaagagaaagagncaacgttaattcaagatcttttagactacaaggacagattggatag 660


Query: 661 aatattgagtcaatcattctcaaagaacgaattgttgacctacgcattgaaagagtcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatattgagtcaatcattctcaaagaacgaattgttgacctacgcattgaaagagtcatt 720


Query: 721 cgaatactttatcaataccaagcaaaacaaacccgccgaattagtcgcaagattcataga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgaatactttatcaataccaagcaaaacaaacccgccgaattagtcgcaagattcataga 780


Query: 781 ttcaaagctaaaagttggtggaaagagaatgctctaagaggaattcaatcaacaaagaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttcaaagctaaaagttggtggaaagagaatgctctaagaggaattcaatcaacaaagaag 840


Query: 841 caattaatgtcaatgttgtatagtcaattgatacagaaacatgtgcatgttatcttaaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 caattaatgtcaatgttgtatagtcaattgatacagaaacatgtgcatgttatcttaaga 900


Query: 901 aaggtttcaatccaatgctgaatggcaataggttagagcatttaggtaaactctatcaac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaggtttcaatccaatgctgaatggcaataggttagagcatttaggtaaactctatcaac 960


Query: 961 tattgaatagcgttggtgaaattaaaaagattaaagagtcatggcaaagttatatcaagc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tattgaatagcgttggtgaaattaaaaagattaaagagtcatggcaaagttatatcaagc 1020


Query: 1021 aaactggtattcaaatgttgaatgataaagagaaagagncaacgttaattcaagatcttt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aaactggtattcaaatgttgaatgataaagagaaagagncaacgttaattcaagatcttt 1080


Query: 1081 tagactacaaggacagattggatagaatattgagtcaatcattctcaaagaacgaattgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tagactacaaggacagattggatagaatattgagtcaatcattctcaaagaacgaattgt 1140


Query: 1141 tgacctacgcattgaaagagtcattcgaatactttatcaataccaagcaaaacaaacccg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tgacctacgcattgaaagagtcattcgaatactttatcaataccaagcaaaacaaacccg 1200


Query: 1201 ccgaattagtcgcaagattcatagattcaaagctaaaagttggtggaaagagaatgctct 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ccgaattagtcgcaagattcatagattcaaagctaaaagttggtggaaagagaatgctct 1260


Query: 1261 aagaggaattagagaccgtgttgaacaagtcgttgatcctcttccgttatattcaaggca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aagaggaattagagaccgtgttgaacaagtcgttgatcctcttccgttatattcaaggca 1320


Query: 1321 aggatgtgtttgaagcattctataaacaagatctatcaaaacgtttactcttggataaat 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aggatgtgtttgaagcattctataaacaagatctatcaaaacgtttactcttggataaat 1380


Query: 1381 caacctcgatcgatgctgagaaatcaatgatttccaaattaaagactgaatgtggtacga 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 caacctcgatcgatgctgagaaatcaatgatttccaaattaaagactgaatgtggtacga 1440


Query: 1441 cgttcactgcaaagttggaggagatgtttaaagacatcgagttaagtaatgatattatga 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cgttcactgcaaagttggaggagatgtttaaagacatcgagttaagtaatgatattatga 1500


Query: 1501 attcatttagagactctccaatgactcagaacttcaaatccatagagatgaatatctatg 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 attcatttagagactctccaatgactcagaacttcaaatccatagagatgaatatctatg 1560


Query: 1561 tgttgaccagtggaaattggccaatacaacctccaatcgaagctacactaccaaaagagt 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tgttgaccagtggaaattggccaatacaacctccaatcgaagctacactaccaaaagagt 1620


Query: 1621 ttttagagtatcaagaagtgtttaacaaattctatctatcaaaacataatggtaaaactt 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ttttagagtatcaagaagtgtttaacaaattctatctatcaaaacataatggtaaaactt 1680


Query: 1681 tgaaatggcaaaatgctctctcttattgtgttttaaaagcaaactttattcaaggtaaaa 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tgaaatggcaaaatgctctctcttattgtgttttaaaagcaaactttattcaaggtaaaa 1740


Query: 1741 aagaattatctgtatcactctttcaaactattattctctacctctttaatgatgttattg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 aagaattatctgtatcactctttcaaactattattctctacctctttaatgatgttattg 1800


Query: 1801 atggtggtgaactctcttttagagatattcaagcaaatactggtttagctatacctgaat 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 atggtggtgaactctcttttagagatattcaagcaaatactggtttagctatacctgaat 1860


Query: 1861 taaaaaagaatttactatctttatgttcttcaaaatctgatattttaattcaaaagaaat 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 taaaaaagaatttactatctttatgttcttcaaaatctgatattttaattcaaaagaaat 1920


Query: 1921 ct 1922
||
Sbjct: 1921 ct 1922


Score = 636 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Plus


Query: 2011 caacaaaaacaaaagtaatcgatgaaactgatacctttttattcaattcaaagtttagta 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2011 caacaaaaacaaaagtaatcgatgaaactgatacctttttattcaattcaaagtttagta 2070


Query: 2071 gtaaactattcaaaatcaaggttaactctattcaaattcaagaaactgttgaagaaaatc 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2071 gtaaactattcaaaatcaaggttaactctattcaaattcaagaaactgttgaagaaaatc 2130


Query: 2131 aaaaaaccaatgaaaatatcattagtgatcgtcaatatcaagttgatgctgccattgtaa 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2131 aaaaaaccaatgaaaatatcattagtgatcgtcaatatcaagttgatgctgccattgtaa 2190


Query: 2191 gaattatgaaaaccagaaaaactttagcccataatttgttaatctctgaattagtatcac 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 gaattatgaaaaccagaaaaactttagcccataatttgttaatctctgaattagtatcac 2250


Query: 2251 ttttgaaattccaaccaaaacctgtggatcttaaaaagagaatagaaattttattaaaaa 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 ttttgaaattccaaccaaaacctgtggatcttaaaaagagaatagaaattttattaaaaa 2310


Query: 2311 gaatatttatgtagagaccct 2331
|||||||||||||||||||||
Sbjct: 2311 gaatatttatgtagagaccct 2331


>Contig-U11867-1 (Contig-U11867-1Q) /CSM_Contig/Contig-U11867-1Q.Seq.d
Length = 2567

Score = 42.1 bits (21), Expect = 0.004
Identities = 48/57 (84%)
Strand = Plus / Plus


Query: 1311 attcaaggcaaggatgtgtttgaagcattctataaacaagatctatcaaaacgttta 1367
||||||| |||||||| |||||| || |||||||||| || || |||||||||||
Sbjct: 1496 attcaagaaaaggatgtatttgaaaaatactataaacaacatttagcaaaacgttta 1552


Score = 34.2 bits (17), Expect = 0.93
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1653 tatctatcaaaacataatggt 1673
||||||||||| |||||||||
Sbjct: 1841 tatctatcaaatcataatggt 1861


Score = 34.2 bits (17), Expect = 0.93
Identities = 47/57 (82%)
Strand = Plus / Plus


Query: 152 gaaagagaaggtgatgaaattgatagagatttaatacatagtttagttaaaatgtta 208
|||||||||||||| | ||||||||| ||||||| | | | ||||| ||||||||
Sbjct: 746 gaaagagaaggtgaagttattgatagaattttaataaaaaatatagttcaaatgtta 802


>Contig-U16357-1 (Contig-U16357-1Q) /CSM_Contig/Contig-U16357-1Q.Seq.d
Length = 1547

Score = 40.1 bits (20), Expect = 0.015
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 1895 atctgatattttaattcaaa 1914
||||||||||||||||||||
Sbjct: 1423 atctgatattttaattcaaa 1442


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 46,508
Number of Sequences: 8402
Number of extensions: 46508
Number of successful extensions: 6759
Number of sequences better than 10.0: 175
length of query: 2331
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2314
effective length of database: 7,932,708
effective search space: 18356286312
effective search space used: 18356286312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1.18
Homology vs DNA
Query= Contig-U15258-1 (Contig-U15258-1Q) /CSM_Contig/Contig-U15258-1Q.Seq.d
(2331 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ410779) Dictyostelium discoideum cDNA clone:ddv1f23, 5' e... 1191 0.0 1
(BJ410056) Dictyostelium discoideum cDNA clone:ddv11e05, 5' ... 1072 0.0 2
(BJ428189) Dictyostelium discoideum cDNA clone:ddv11e05, 3' ... 579 0.0 3
(BJ428949) Dictyostelium discoideum cDNA clone:ddv1f23, 3' e... 632 0.0 2
(EH732671) CNMM5555.b1_F21.ab1 CNM(LMS) spotted knapweed Cen... 60 2e-10 2
(EL407916) CFFS569.b1_B23.ab1 CFF(LMS) safflower Carthamus t... 60 2e-10 2
(EL404168) CFFS2099.b1_F21.ab1 CFF(LMS) safflower Carthamus ... 60 2e-10 2
(EH784205) CNSS23440.b1_O03.ab1 CNS(LMS) yellow starthistle ... 60 2e-10 2
(CX069432) UCRCS08_10D08_b Parent Washington Navel Orange Ca... 56 5e-10 2
(EY668698) CS00-C1-102-066-B04-CT.F Sweet orange leaf, infec... 56 5e-10 2
(ED807384) ML__Ba0020H08r ML__Ba Mimulus lewisii genomic, ge... 46 3e-08 2
(CT575423) Pinus pinaster bud EST. 58 5e-07 2
(DR102719) STRR1_83_G10.b1_A033 Stem Response Resistant Pinu... 58 5e-07 2
(FC743403) CBBI13670.fwd CBBI Lottia gigantea 26h,37h,61h La... 68 2e-06 1
(FC724176) CBBG1964.fwd CBBG Lottia gigantea 12,15,18h embry... 68 2e-06 1
(EX918431) lj19b11.g7 Cycas sporophyll (w/o ovule) (NYBG) Cy... 68 2e-06 1
(EC772617) EST 9113 Guarana fruits cDNA library Paullinia cu... 46 1e-05 2
(BU039026) PP_LEa0001A06f Peach developing fruit mesocarp Pr... 44 3e-05 2
(EX417938) GQ03709.B7_C15 GQ037 - Shoot tip - Dormant Picea ... 50 7e-05 2
(EX364106) GQ03208.B7_B11 GQ032 - Shoot tip (Normalized libr... 50 8e-05 2
(EX368592) GQ03214.B7_H14 GQ032 - Shoot tip (Normalized libr... 50 9e-05 2
(EH715785) CNML2107.b1_F23.ab1 CNM(LMS) spotted knapweed Cen... 44 9e-05 3
(EH715780) CNML2102.b1_L21.ab1 CNM(LMS) spotted knapweed Cen... 44 9e-05 3
(EY741856) CS00-C3-705-002-C10-CT.F Sweet orange fruit, deve... 50 9e-05 2
(EH765008) CNSM11035.b1_E24.ab1 CNS(LMS) yellow starthistle ... 44 1e-04 3
(EY160434) CBTN8017.b1_B14.ab1:P Triphysaria pusilla root ti... 46 1e-04 2
(EY165730) CBTI10779.b1_E07.ab1:P Triphysaria pusilla root t... 46 1e-04 2
(DV689908) CGN-33116 Leaf Coffea canephora cDNA clone cccl18... 40 1e-04 2
(DV450863) CV02005B1B06.f1 CV02-normalized library Manihot e... 58 3e-04 2
(DW157643) CLVX9740.b1_H11.ab1 CLV(XYZ) lettuce virosa Lactu... 60 4e-04 1
(EX569269) N0619 Pisum sativum shoot apical meristem ESTs Pi... 60 4e-04 1
(EX569268) N0158 Pisum sativum shoot apical meristem ESTs Pi... 60 4e-04 1
(EE505304) FNYFDA_UP_009_C01_16MAR2004_011 Brassica seed dev... 44 4e-04 2
(FE450443) CAOS15341.fwd CAOS Selaginella moellendorffii mix... 48 5e-04 3
(EV021051) BNSCS2CT_UP_072_B12_18APR2007_094 Brassica napus ... 44 0.001 2
(EE462563) BNDH5DCT_UP_027_F10_27JAN2004_070 Brassica napus ... 44 0.001 2
(AC169510) Mus musculus BAC clone RP23-121E6 from chromosome... 46 0.001 2
(CT009532) Mouse DNA sequence from clone RP23-122B16 on chro... 46 0.001 2
(CU357020) Aphanomyces euteiches cDNA. 48 0.001 2
(DW119503) CLRY8117.b2_I13.ab1 CLR(XYZ) lettuce serriola Lac... 48 0.001 2
(BM780087) EST590663 KV2 Medicago truncatula cDNA clone pKV2... 48 0.001 2
(BM779712) EST590288 KV2 Medicago truncatula cDNA clone pKV2... 48 0.001 2
(AW690554) NF030H11ST1F1000 Developing stem Medicago truncat... 48 0.001 2
(DV130105) CV03056A1B04.f1 CV03-normalized library Euphorbia... 48 0.001 2
(BQ148883) NF083F04FL1F1042 Developing flower Medicago trunc... 48 0.001 2
(CX541382) s13dNF73G05GS040_466064 Germinating Seed Medicago... 48 0.002 2
(AW127073) M110003e GVN Medicago truncatula cDNA clone N37, ... 48 0.002 2
(DV457859) CV02025B1H12.f1 CV02-normalized library Manihot e... 58 0.002 1
(FF379647) CASL022TF CASL Manihot esculenta cDNA 5', mRNA se... 58 0.002 1
(FE967004) PLATE_T3_033_E10_01DEC2004_072 Opium poppy elicit... 58 0.002 1
(EY361322) CAWZ7661.fwd CAWZ Helobdella robusta Primary Late... 58 0.002 1
(EY345667) CAWZ14187.fwd CAWZ Helobdella robusta Primary Lat... 58 0.002 1
(AJ617173) Nicotiana plumbaginifolia cDNA-AFLP fragment, clo... 44 0.002 2
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 48 0.006 25
(CP000312) Clostridium perfringens SM101, complete genome. 34 0.006 23
(CN184205) UCRCS04_0005C13_r Ruby Orange Developing Flower c... 56 0.006 1
(FG491558) 030213KAWC005122HT (KAWC) Actinidia chinensis - a... 56 0.006 1
(CO995707) pam01-19ms1-d09 Pam01 Persea americana cDNA clone... 40 0.010 2
(AI166428) xylem.est.261 Poplar xylem Lambda ZAPII library P... 48 0.011 2
(DY651078) PU4_plate43_L06 PU4 Prunus persica cDNA similar t... 42 0.012 2
(BZ042775) lkg97b12.b1 B.oleracea002 Brassica oleracea genom... 40 0.014 2
(DT590650) wmi01-20ms2-b05 Wmi01 Welwitschia mirabilis cDNA ... 48 0.014 2
(DN496081) P035H08.5pR Populus petioles cDNA library Populus... 48 0.017 2
(CO090202) GR__Ea10A21.f GR__Ea Gossypium raimondii cDNA clo... 44 0.021 2
(ES913394) BNARO2GH_T3_005_B07_15DEC2006_061 Brassica napus ... 40 0.021 2
(EV217777) 0132885 Brassica napus Root - drought Brassica na... 40 0.021 2
(CU487217) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 54 0.025 1
(AC191504) Sorex araneus clone SA_Ba-409K1, WORKING DRAFT SE... 54 0.025 1
(EL402995) CFFS14101.b1_I22.ab1 CFF(LMS) safflower Carthamus... 54 0.025 1
(EH785219) CNSS24467.b1_E22.ab1 CNS(LMS) yellow starthistle ... 54 0.025 1
(GE597463) CCPW600.b1_O06.ab1 CCP(UWX) Globe Artichoke Cynar... 54 0.025 1
(EY106660) CAZI4856.fwd CAZI Artemisia annua normalized leaf... 54 0.025 1
(EY106659) CAZI4856.rev CAZI Artemisia annua normalized leaf... 54 0.025 1
(EY085825) CAZI17073.fwd CAZI Artemisia annua normalized lea... 54 0.025 1
(EY085824) CAZI17073.rev CAZI Artemisia annua normalized lea... 54 0.025 1
(EY074654) CAZI11372.rev CAZI Artemisia annua normalized lea... 54 0.025 1
(EY072310) CAZI10148.fwd CAZI Artemisia annua normalized lea... 54 0.025 1
(CD487161) Gm_ckr0849 Soybean induced by Salicylic Acid Glyc... 42 0.042 2
(EX389612) GQ03314.B7_P22 GQ033 - Terminal leader (Normalize... 40 0.059 2
(CQ870477) Sequence 898 from Patent WO2004074320. 40 0.060 2
(CO128709) GR__Eb25L05.r GR__Eb Gossypium raimondii cDNA clo... 50 0.063 2
(AW774483) EST333634 KV3 Medicago truncatula cDNA clone pKV3... 42 0.080 2
(EI874897) CAH1-43P22TV CAA1Ba Cicer arietinum genomic clone... 52 0.10 1
(EI873572) CAH1-41J2TV CAA1Ba Cicer arietinum genomic clone ... 52 0.10 1
(DU723482) CULL, Lupinus angustifolius P27255 Lupinus angust... 52 0.10 1
(DU723430) CULL, Lupinus angustifolius 83A:476 Lupinus angus... 52 0.10 1
(EL396445) CFFM7720.b1_O09.ab1 CFF(LMS) safflower Carthamus ... 52 0.10 1
(EU218537) Solanum lycopersicum cullin 4 (CUL4) mRNA, comple... 38 0.17 3
(CJ764759) Ipomoea nil cDNA clone:jmsf34g24, 3' end. 48 0.17 2
(BJ325402) Dictyostelium discoideum cDNA clone:dda14d08, 5' ... 42 0.18 2
(CJ769746) Ipomoea nil cDNA clone:jmsf9p10, 3' end. 48 0.20 2
(BJ577041) Ipomoea nil cDNA clone:jm33n17, 3' end, single read. 48 0.20 2
(CJ761363) Ipomoea nil cDNA clone:jmsf25k20, 3' end. 48 0.21 2
(CJ759277) Ipomoea nil cDNA clone:jmsf1l08, 3' end. 48 0.21 2
(FE485142) CAOT10394.rev CAOT Selaginella moellendorffii mix... 48 0.21 2
(EV265287) GLLAS64TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 48 0.22 2
(FE492948) CAOT5944.rev CAOT Selaginella moellendorffii mixe... 48 0.22 2
(EJ759450) 1092963114256 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.25 2
(EV096585) 0194951 Brassica napus Apical meristem Brassica n... 40 0.29 2
(EX127958) BR111788 etiolated mature leaf cDNA library KHLW ... 40 0.29 2

>(BJ410779) Dictyostelium discoideum cDNA clone:ddv1f23, 5' end,
single read.
Length = 610

Score = 1191 bits (601), Expect = 0.0
Identities = 610/610 (100%)
Strand = Plus / Plus


Query: 1 ttttatatttagatagaacttatgttattnaaaattnaatacggttaaatnaatttggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttatatttagatagaacttatgttattnaaaattnaatacggttaaatnaatttggga 60


Query: 61 tttaggtttattttattttggtaataatttatcacaacaatcaaatttagaaagaaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaggtttattttattttggtaataatttatcacaacaatcaaatttagaaagaaaaac 120


Query: 121 aatcgattcattattatattcaattagatgtgaaagagaaggtgatgaaattgatagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcgattcattattatattcaattagatgtgaaagagaaggtgatgaaattgatagaga 180


Query: 181 tttaatacatagtttagttaaaatgttatcatcattaaatatttatacaaaatttgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttaatacatagtttagttaaaatgttatcatcattaaatatttatacaaaatttgaaat 240


Query: 241 tgaatttattaaagaaacaaatagattttatgatatggaaggtaatagtaagattaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaatttattaaagaaacaaatagattttatgatatggaaggtaatagtaagattaatga 300


Query: 301 aattgaaacaccaatgtatttaaagtatgtttgtgaaagattaaatcaagaaggtgagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattgaaacaccaatgtatttaaagtatgtttgtgaaagattaaatcaagaaggtgagag 360


Query: 361 attaatgagatatttagagcaatcgacaaagaagcaattgatggcagtgttggatagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attaatgagatatttagagcaatcgacaaagaagcaattgatggcagtgttggatagaca 420


Query: 421 attgatagagagacatgtggatgttatcttggagaaaggtttcaatgcaatggtgaatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgatagagagacatgtggatgttatcttggagaaaggtttcaatgcaatggtgaatgg 480


Query: 481 cgataggttagaggatttaggtaaactctatcaactattgaatagcgttggtgaaattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgataggttagaggatttaggtaaactctatcaactattgaatagcgttggtgaaattaa 540


Query: 541 aaagattaaagagtcatggcaaagttatatcaagcaaactggtattcaaatgttgaatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaagattaaagagtcatggcaaagttatatcaagcaaactggtattcaaatgttgaatga 600


Query: 601 taaagagaaa 610
||||||||||
Sbjct: 601 taaagagaaa 610

Score = 281 bits (142), Expect(2) = 1e-85
Identities = 154/158 (97%)
Strand = Plus / Plus


Query: 898 agaaaggtttcaatccaatgctgaatggcaataggttagagcatttaggtaaactctatc 957
|||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 453 agaaaggtttcaatgcaatggtgaatggcgataggttagaggatttaggtaaactctatc 512


Query: 958 aactattgaatagcgttggtgaaattaaaaagattaaagagtcatggcaaagttatatca 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aactattgaatagcgttggtgaaattaaaaagattaaagagtcatggcaaagttatatca 572


Query: 1018 agcaaactggtattcaaatgttgaatgataaagagaaa 1055
||||||||||||||||||||||||||||||||||||||
Sbjct: 573 agcaaactggtattcaaatgttgaatgataaagagaaa 610

Score = 69.9 bits (35), Expect(2) = 1e-85
Identities = 62/71 (87%)
Strand = Plus / Plus


Query: 826 caatcaacaaagaagcaattaatgtcaatgttgtatagtcaattgatacagaaacatgtg 885
||||| |||||||||||||| ||| || ||||| |||| ||||||||| ||| |||||||
Sbjct: 380 caatcgacaaagaagcaattgatggcagtgttggatagacaattgatagagagacatgtg 439


Query: 886 catgttatctt 896
||||||||||
Sbjct: 440 gatgttatctt 450

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,926,799,641
Number of extensions: 180809241
Number of successful extensions: 16299755
Number of sequences better than 10.0: 327
Length of query: 2331
Length of database: 98,766,808,389
Length adjustment: 25
Effective length of query: 2306
Effective length of database: 100,606,115,110
Effective search space: 231997701443660
Effective search space used: 231997701443660
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.15
Homology vs Protein
Query= Contig-U15258-1 (Contig-U15258-1Q) /CSM_Contig/Contig-U15258-1Q.Seq.d
(2331 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54CS2) RecName: Full=Cullin-4; Short=CUL-4; AltName: ... 761 0.0
EU218537_1(EU218537|pid:none) Solanum lycopersicum cullin 4 (CUL... 422 e-116
AY084267_1(AY084267|pid:none) Arabidopsis thaliana clone 101723 ... 418 e-115
AY091113_1(AY091113|pid:none) Arabidopsis thaliana putative cull... 418 e-115
AM432295_1(AM432295|pid:none) Vitis vinifera contig VV78X168341.... 417 e-115
AC084296_4(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJN... 415 e-115
BC166184_1(BC166184|pid:none) Xenopus tropicalis cullin 4B, mRNA... 411 e-113
BC167417_1(BC167417|pid:none) Xenopus tropicalis cDNA clone IMAG... 411 e-113
AK160998_1(AK160998|pid:none) Mus musculus 15 days embryo head c... 409 e-112
AL513356_5(AL513356|pid:none) Mouse DNA sequence from clone RP23... 409 e-112
BC100244_1(BC100244|pid:none) Xenopus laevis hypothetical protei... 409 e-112
AK123688_1(AK123688|pid:none) Homo sapiens cDNA FLJ41694 fis, cl... 409 e-112
(Q13620) RecName: Full=Cullin-4B; Short=CUL-4B; 409 e-112
AC002476_3(AC002476|pid:none) Human PAC clone RP1-318C15 from Xq... 409 e-112
AY365125_1(AY365125|pid:none) Homo sapiens cullin 4B (CUL4B) mRN... 408 e-112
AK012410_1(AK012410|pid:none) Mus musculus 11 days embryo whole ... 407 e-112
BX537787_1(BX537787|pid:none) Homo sapiens mRNA; cDNA DKFZp779P1... 407 e-112
AF212995_1(AF212995|pid:none) Homo sapiens cullin CUL4B (CUL4B) ... 407 e-112
AB025620_3(AB025620|pid:none) Arabidopsis thaliana genomic DNA, ... 404 e-111
BC166799_1(BC166799|pid:none) Rattus norvegicus similar to culli... 394 e-108
AK168215_1(AK168215|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 394 e-108
(Q13619) RecName: Full=Cullin-4A; Short=CUL-4A; &AL136... 394 e-108
AB012193_1(AB012193|pid:none) Homo sapiens mRNA for cullin-4A, p... 394 e-108
BC024113_1(BC024113|pid:none) Mus musculus cullin 4A, mRNA (cDNA... 394 e-108
AY892461_1(AY892461|pid:none) Synthetic construct Homo sapiens c... 394 e-108
AK314835_1(AK314835|pid:none) Homo sapiens cDNA, FLJ95721, highl... 391 e-107
CR761985_1(CR761985|pid:none) Xenopus tropicalis finished cDNA, ... 385 e-105
BC123909_1(BC123909|pid:none) Xenopus tropicalis cullin 4A, mRNA... 385 e-105
AK296700_1(AK296700|pid:none) Homo sapiens cDNA FLJ58013 complet... 380 e-103
U58090_1(U58090|pid:none) Human Hs-cul-4A mRNA, partial cds. 366 2e-99
CP001329_598(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 360 1e-97
BC165630_1(BC165630|pid:none) Danio rerio cullin 4A, mRNA (cDNA ... 314 8e-84
BC054607_1(BC054607|pid:none) Danio rerio cullin 4A, mRNA (cDNA ... 314 8e-84
FB802427_1(FB802427|pid:none) Sequence 21700 from Patent WO20080... 309 9e-83
AE013599_593(AE013599|pid:none) Drosophila melanogaster chromoso... 305 4e-81
(Q54NZ5) RecName: Full=Cullin-3; Short=CUL-3; AltName: ... 296 3e-78
FB802391_1(FB802391|pid:none) Sequence 21664 from Patent WO20080... 286 2e-75
FB802359_1(FB802359|pid:none) Sequence 21632 from Patent WO20080... 275 4e-72
AL606454_2(AL606454|pid:none) Oryza sativa genomic DNA, chromoso... 275 4e-72
AM478489_5(AM478489|pid:none) Vitis vinifera contig VV78X092018.... 271 1e-70
AK072402_1(AK072402|pid:none) Oryza sativa Japonica Group cDNA c... 271 1e-70
AC146568_18(AC146568|pid:none) Medicago truncatula clone mth2-10... 269 4e-70
CU633900_405(CU633900|pid:none) Podospora anserina genomic DNA c... 268 5e-70
A86395(A86395) hypothetical protein T2P11.2 [imported] - Arabido... 263 2e-68
AC013289_13(AC013289|pid:none) Arabidopsis thaliana chromosome 1... 263 3e-68
AJ344541_1(AJ344541|pid:none) Arabidopsis thaliana partial mRNA ... 263 3e-68
AK230392_1(AK230392|pid:none) Arabidopsis thaliana mRNA for cull... 261 1e-67
BT069454_1(BT069454|pid:none) Zea mays full-length cDNA clone ZM... 259 4e-67
FB802477_1(FB802477|pid:none) Sequence 21750 from Patent WO20080... 256 3e-66
AE014134_2672(AE014134|pid:none) Drosophila melanogaster chromos... 252 4e-65
BT082116_1(BT082116|pid:none) Drosophila melanogaster MIP05150 f... 252 4e-65
AM484063_2(AM484063|pid:none) Vitis vinifera contig VV78X066416.... 249 2e-64
FN316912_1(FN316912|pid:none) Schistosoma japonicum isolate Anhu... 241 7e-62
FN357616_27(FN357616|pid:none) Schistosoma mansoni genome sequen... 238 7e-61
FN357616_28(FN357616|pid:none) Schistosoma mansoni genome sequen... 238 7e-61
U58091_1(U58091|pid:none) Human Hs-cul-4B mRNA, partial cds. 238 7e-61
BC010347_1(BC010347|pid:none) Mus musculus cullin 4B, mRNA (cDNA... 232 5e-59
FN357359_3(FN357359|pid:none) Schistosoma mansoni genome sequenc... 229 4e-58
(O14122) RecName: Full=Cullin-4; Short=Cul-4; &AB01702... 228 6e-58
BX842631_2(BX842631|pid:none) Neurospora crassa DNA linkage grou... 228 1e-57
CP001323_208(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 212 4e-53
AB179010_1(AB179010|pid:none) Macaca fascicularis testis cDNA cl... 209 5e-52
(Q13618) RecName: Full=Cullin-3; Short=CUL-3; &AB38392... 209 5e-52
AF062537_1(AF062537|pid:none) Homo sapiens cullin 3 mRNA, comple... 209 5e-52
AC073052_1(AC073052|pid:none) Homo sapiens BAC clone RP11-92F20 ... 209 5e-52
AB014517_1(AB014517|pid:none) Homo sapiens mRNA for KIAA0617 pro... 209 5e-52
AK299644_1(AK299644|pid:none) Homo sapiens cDNA FLJ53180 complet... 209 5e-52
U58089_1(U58089|pid:none) Human Hs-cul-3 mRNA, partial cds. 209 5e-52
BC168969_1(BC168969|pid:none) Rattus norvegicus cullin 3, mRNA (... 207 1e-51
BC077239_1(BC077239|pid:none) Xenopus laevis cullin 3, mRNA (cDN... 207 2e-51
BC135616_1(BC135616|pid:none) Xenopus tropicalis cullin 3, mRNA ... 206 2e-51
AY423034_1(AY423034|pid:none) Danio rerio cullin 3 (CUL3) mRNA, ... 206 4e-51
AK129174_1(AK129174|pid:none) Mus musculus premature mRNA for mK... 205 5e-51
(Q9JLV5) RecName: Full=Cullin-3; Short=CUL-3; &AF12973... 205 5e-51
AY337761_1(AY337761|pid:none) Homo sapiens cullin 3 isoform (CUL... 204 1e-50
(Q09760) RecName: Full=Cullin-3; Short=Cul-3; &CU32967... 202 3e-50
(Q94AH6) RecName: Full=Cullin-1; &AJ318017_1(AJ318017|pid:none)... 201 1e-49
AJ319540_1(AJ319540|pid:none) Arabidopsis thaliana partial mRNA ... 199 3e-49
FB802385_1(FB802385|pid:none) Sequence 21658 from Patent WO20080... 198 6e-49
S62405(S62405)hypothetical protein SPAC24H6.03 - fission yeast ... 193 2e-47
CU633438_499(CU633438|pid:none) Podospora anserina genomic DNA c... 192 6e-47
(O60999) RecName: Full=Cullin-1; Short=CUL-1; AltName: ... 188 7e-46
AF508033_1(AF508033|pid:none) Equus caballus cullin 4A (CUL4A) m... 188 7e-46
FB802471_1(FB802471|pid:none) Sequence 21744 from Patent WO20080... 187 1e-45
AL713629_14(AL713629|pid:none) Aspergillus fumigatus BAC AFA5C11... 187 1e-45
U58086_1(U58086|pid:none) Caenorhabditis elegans cul-4 mRNA, com... 187 2e-45
EF678052_1(EF678052|pid:none) Picea sitchensis clone WS02821_G23... 184 1e-44
CP001325_68(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 184 1e-44
AP007155_94(AP007155|pid:none) Aspergillus oryzae RIB40 genomic ... 184 1e-44
FB802393_1(FB802393|pid:none) Sequence 21666 from Patent WO20080... 184 1e-44
FN357359_1(FN357359|pid:none) Schistosoma mansoni genome sequenc... 182 6e-44
FN318267_1(FN318267|pid:none) Schistosoma japonicum isolate Anhu... 182 6e-44
AJ344533_1(AJ344533|pid:none) Nicotiana tabacum mRNA for cullin ... 181 1e-43
AB080190_1(AB080190|pid:none) Pisum sativum cul1 mRNA for cullin... 179 5e-43
AJ344535_1(AJ344535|pid:none) Nicotiana tabacum partial mRNA for... 178 9e-43
AC009525_2(AC009525|pid:none) Arabidopsis thaliana chromosome I ... 174 1e-41
BC066480_1(BC066480|pid:none) Danio rerio cullin 1a, mRNA (cDNA ... 174 1e-41
BC045445_1(BC045445|pid:none) Danio rerio cullin 1a, mRNA (cDNA ... 174 1e-41
(Q13616) RecName: Full=Cullin-1; Short=CUL-1; &(Q5R4G6... 174 1e-41
BC004836_1(BC004836|pid:none) Mus musculus cullin 1, mRNA (cDNA ... 174 1e-41
U58087_1(U58087|pid:none) Human Hs-cul-1 mRNA, complete cds. 174 1e-41
AK096163_1(AK096163|pid:none) Homo sapiens cDNA FLJ38844 fis, cl... 174 1e-41
AK164274_1(AK164274|pid:none) Mus musculus 9 days embryo whole b... 174 1e-41
FB802419_1(FB802419|pid:none) Sequence 21692 from Patent WO20080... 173 2e-41
(Q17391) RecName: Full=Cullin-3; Short=CUL-3; &AC02474... 173 3e-41
AM920437_994(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 172 4e-41
BC097675_1(BC097675|pid:none) Xenopus laevis hypothetical protei... 172 6e-41
AF136441_1(AF136441|pid:none) Mus musculus cullin 1 (Cul1) mRNA,... 172 6e-41
AM270168_143(AM270168|pid:none) Aspergillus niger contig An08c01... 171 8e-41
AC011806_19(AC011806|pid:none) Genomic Sequence For Oryza sativa... 171 1e-40
DQ466084_1(DQ466084|pid:none) Xenopus tropicalis cullin-1 mRNA, ... 171 1e-40
BC093534_1(BC093534|pid:none) Xenopus laevis hypothetical protei... 171 1e-40
T16367(T16367)hypothetical protein F45E12.3 - Caenorhabditis ele... 169 3e-40
AE017347_438(AE017347|pid:none) Cryptococcus neoformans var. neo... 169 4e-40
FB802425_1(FB802425|pid:none) Sequence 21698 from Patent WO20080... 167 2e-39
(Q9XZJ3) RecName: Full=Cullin-2; Short=CUL-2; AltName: ... 166 3e-39
AP003281_23(AP003281|pid:none) Oryza sativa Japonica Group genom... 160 3e-37
AJ344534_1(AJ344534|pid:none) Nicotiana tabacum mRNA for cullin ... 159 4e-37
DQ250017_1(DQ250017|pid:none) Petunia integrifolia subsp. inflat... 158 7e-37
AK064940_1(AK064940|pid:none) Oryza sativa Japonica Group cDNA c... 157 2e-36
AC011806_16(AC011806|pid:none) Genomic Sequence For Oryza sativa... 157 2e-36
AY724780_1(AY724780|pid:none) Camellia sinensis cullin mRNA, par... 157 2e-36
CU633897_277(CU633897|pid:none) Podospora anserina genomic DNA c... 157 2e-36
FN392320_390(FN392320|pid:none) Pichia pastoris GS115 chromosome... 155 6e-36
BC031844_1(BC031844|pid:none) Homo sapiens cullin 3, mRNA (cDNA ... 154 2e-35
FB802475_1(FB802475|pid:none) Sequence 21748 from Patent WO20080... 153 2e-35
(Q24311) RecName: Full=Cullin homolog 1; AltName: Full=Lin-19 ho... 153 2e-35
T20365(T20365)hypothetical protein D2045.6 - Caenorhabditis eleg... 152 4e-35
(Q17389) RecName: Full=Cullin-1; Short=CUL-1; AltName: ... 152 4e-35
FB802383_1(FB802383|pid:none) Sequence 21656 from Patent WO20080... 151 9e-35
AC105772_11(AC105772|pid:none) Oryza sativa (japonica cultivar-g... 150 2e-34
AE017356_115(AE017356|pid:none) Cryptococcus neoformans var. neo... 144 1e-32
AB016896_1(AB016896|pid:none) Schizosaccharomyces pombe pcu1+ ge... 142 7e-32
CR382130_516(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 141 9e-32
FB802423_1(FB802423|pid:none) Sequence 21696 from Patent WO20080... 140 2e-31
BC025902_1(BC025902|pid:none) Mus musculus cullin 2, mRNA (cDNA ... 139 6e-31
AK016520_1(AK016520|pid:none) Mus musculus adult male testis cDN... 139 6e-31
EU586194_1(EU586194|pid:none) Malus x domestica cultivar Fuji cu... 139 6e-31
AK220287_1(AK220287|pid:none) Mus musculus mRNA for mKIAA4106 pr... 139 6e-31
BC059348_1(BC059348|pid:none) Xenopus laevis hypothetical protei... 137 2e-30
U83410_1(U83410|pid:none) Human CUL-2 (cul-2) mRNA, complete cds. 135 7e-30
AL392046_1(AL392046|pid:none) Human DNA sequence from clone RP11... 135 7e-30
U58088_1(U58088|pid:none) Human Hs-cul-2 mRNA, partial cds. 135 7e-30
AL392046_3(AL392046|pid:none) Human DNA sequence from clone RP11... 135 7e-30
Z92822_4(Z92822|pid:none) Caenorhabditis elegans Cosmid ZK520, c... 132 6e-29
AE014134_3634(AE014134|pid:none) Drosophila melanogaster chromos... 130 2e-28
FN357586_5(FN357586|pid:none) Schistosoma mansoni genome sequenc... 130 2e-28
Z92822_7(Z92822|pid:none) Caenorhabditis elegans Cosmid ZK520, c... 125 5e-27
U58084_1(U58084|pid:none) Caenorhabditis elegans cul-2 mRNA, com... 124 1e-26
FN392319_628(FN392319|pid:none) Pichia pastoris GS115 chromosome... 120 3e-26
AF513243_1(AF513243|pid:none) Equus caballus cullin 4B (CUL4B) m... 120 3e-25
CR382127_77(CR382127|pid:none) Yarrowia lipolytica strain CLIB12... 115 7e-24
CU928169_354(CU928169|pid:none) Kluyveromyces thermotolerans str... 112 5e-23
FM992695_41(FM992695|pid:none) Candida dubliniensis CD36 chromos... 112 8e-23
CR380956_393(CR380956|pid:none) Candida glabrata strain CBS138 c... 111 1e-22
(Q9JJ31) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 111 1e-22
CR382135_496(CR382135|pid:none) Debaryomyces hansenii strain CBS... 111 1e-22
CR382126_238(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 110 3e-22
(Q93034) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 109 5e-22
X81882_1(X81882|pid:none) H.sapiens mRNA for for vasopressin act... 109 5e-22
AK003679_1(AK003679|pid:none) Mus musculus 18-day embryo whole b... 109 5e-22
(Q29425) RecName: Full=Cullin-5; Short=CUL-5; AltName: ... 109 5e-22
AF017061_1(AF017061|pid:none) Homo sapiens vasopressin-activated... 109 5e-22
AK031955_1(AK031955|pid:none) Mus musculus adult male medulla ob... 104 2e-20
FB802421_1(FB802421|pid:none) Sequence 21694 from Patent WO20080... 100 6e-20
AP008209_2850(AP008209|pid:none) Oryza sativa (japonica cultivar... 102 8e-20
AK164640_1(AK164640|pid:none) Mus musculus 13 days embryo stomac... 102 8e-20
CU928175_388(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 100 2e-19
DQ431854_1(DQ431854|pid:none) Oryza sativa cullin mRNA, partial ... 100 3e-19
FM992690_154(FM992690|pid:none) Candida dubliniensis CD36 chromo... 97 4e-19
T27884(T27884)hypothetical protein ZK520.4 - Caenorhabditis eleg... 100 4e-19
C88618(C88618)protein ZK520.4 [imported] - Caenorhabditis elegans 100 4e-19
AE014297_4483(AE014297|pid:none) Drosophila melanogaster chromos... 98 1e-18
(P53202) RecName: Full=Cullin-3; AltName: Full=Cullin-B; &AY387... 98 2e-18
T28043(T28043)hypothetical protein ZK856.1 - Caenorhabditis eleg... 97 2e-18
CR382136_670(CR382136|pid:none) Debaryomyces hansenii strain CBS... 96 4e-18
AK117909_1(AK117909|pid:none) Arabidopsis thaliana At1g02980 mRN... 93 4e-17
CR382123_789(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 93 4e-17
AE016819_731(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 90 4e-16
AK038873_1(AK038873|pid:none) Mus musculus adult male hypothalam... 85 1e-14
BC154320_1(BC154320|pid:none) Danio rerio cullin 5, mRNA (cDNA c... 80 3e-13
BC057475_1(BC057475|pid:none) Danio rerio cullin 5, mRNA (cDNA c... 79 1e-12
FN357424_5(FN357424|pid:none) Schistosoma mansoni genome sequenc... 79 1e-12
AY809822_1(AY809822|pid:none) Schistosoma japonicum SJCHGC05790 ... 77 3e-12
AC159451_26(AC159451|pid:none) Trypanosoma brucei chromosome 8 c... 75 1e-11
AL844505_293(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 74 2e-11
FM992688_565(FM992688|pid:none) Candida dubliniensis CD36 chromo... 74 2e-11
CR860407_1(CR860407|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 70 3e-10
AK166251_1(AK166251|pid:none) Mus musculus mammary gland RCB-052... 70 4e-10
FN392319_1406(FN392319|pid:none) Pichia pastoris GS115 chromosom... 69 6e-10
AM910993_191(AM910993|pid:none) Plasmodium knowlesi strain H chr... 69 1e-09
FN357969_1(FN357969|pid:none) Schistosoma mansoni genome sequenc... 67 2e-09
AK003885_1(AK003885|pid:none) Mus musculus 18-day embryo whole b... 67 3e-09
AM502243_134(AM502243|pid:none) Leishmania infantum chromosome 25. 67 4e-09
AF126814_1(AF126814|pid:none) Strongyloides stercoralis cullin-l... 65 8e-09
AY223095_1(AY223095|pid:none) Schistosoma japonicum clone ZZD134... 65 1e-08
CT005272_316(CT005272|pid:none) Leishmania major strain Friedlin... 65 1e-08
AM502234_128(AM502234|pid:none) Leishmania infantum chromosome 16. 65 1e-08
BC095589_1(BC095589|pid:none) Danio rerio cullin 1b, mRNA (cDNA ... 64 2e-08
CT005255_128(CT005255|pid:none) Leishmania major strain Friedlin... 64 2e-08
AM502242_168(AM502242|pid:none) Leishmania infantum chromosome 24. 64 3e-08
CT005264_131(CT005264|pid:none) Leishmania major strain Friedlin... 63 4e-08
BT052950_1(BT052950|pid:none) Medicago truncatula clone MTYFL_FM... 61 2e-07
CT005263_229(CT005263|pid:none) Leishmania major strain Friedlin... 61 2e-07
AC159411_30(AC159411|pid:none) Trypanosoma brucei chromosome 3 c... 61 2e-07
AL590447_86(AL590447|pid:none) chromosome VII of strain GB-M1 of... 60 4e-07
AM494961_237(AM494961|pid:none) Leishmania braziliensis chromoso... 60 5e-07
EU489518_1(EU489518|pid:none) Vitis vinifera cullin 4 (cul4) mRN... 52 3e-05
FN357443_20(FN357443|pid:none) Schistosoma mansoni genome sequen... 50 5e-04
EU441366_1(EU441366|pid:none) Xenopus borealis clone Cullin3.a c... 48 0.002
CU928180_471(CU928180|pid:none) Kluyveromyces thermotolerans str... 47 0.002
AP008218_551(AP008218|pid:none) Oryza sativa (japonica cultivar-... 47 0.003
AM910996_572(AM910996|pid:none) Plasmodium knowlesi strain H chr... 47 0.003
FN358401_1(FN358401|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
AP003246_32(AP003246|pid:none) Oryza sativa Japonica Group genom... 46 0.005
AP007155_281(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 46 0.007
AM920437_972(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 45 0.012
AY058717_1(AY058717|pid:none) Drosophila melanogaster LD45730 fu... 44 0.026
AE013599_3986(AE013599|pid:none) Drosophila melanogaster chromos... 44 0.026
BC166796_1(BC166796|pid:none) Rattus norvegicus anaphase promoti... 44 0.034
BC107471_1(BC107471|pid:none) Rattus norvegicus anaphase promoti... 44 0.034
CP000867_1319(CP000867|pid:none) Methanococcus maripaludis C6, c... 44 0.034
AE014296_2364(AE014296|pid:none) Drosophila melanogaster chromos... 43 0.045
S44845(S44845)K06H7.5 protein - Caenorhabditis elegans 43 0.045
AB037827_1(AB037827|pid:none) Homo sapiens mRNA for KIAA1406 pro... 43 0.045
AM270238_6(AM270238|pid:none) Aspergillus niger contig An11c0210... 43 0.045
BC001579_1(BC001579|pid:none) Homo sapiens anaphase promoting co... 43 0.045
BX950229_1397(BX950229|pid:none) Methanococcus maripaludis strai... 43 0.045
BC027351_1(BC027351|pid:none) Mus musculus anaphase promoting co... 42 0.13
AK154465_1(AK154465|pid:none) Mus musculus NOD-derived CD11c +ve... 42 0.13
AK030306_1(AK030306|pid:none) Mus musculus 11 days pregnant adul... 41 0.22
CP000742_643(CP000742|pid:none) Methanococcus vannielii SB, comp... 41 0.22
AK080305_1(AK080305|pid:none) Mus musculus 3 days neonate thymus... 41 0.22
CP001557_30(CP001557|pid:none) Borrelia burgdorferi 29805 plasmi... 40 0.50
CP000673_1353(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 39 0.65
AY675111_1(AY675111|pid:none) Ostreococcus tauri anaphase promot... 39 0.65
AC150566_3(AC150566|pid:none) Medicago truncatula clone mth2-21o... 39 0.85
CP001100_725(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 39 0.85
AY815824_1(AY815824|pid:none) Schistosoma japonicum SJCHGC09488 ... 39 0.85
(B5ZAT6) RecName: Full=Seryl-tRNA synthetase; EC=6.1.1.... 39 0.85
T26969(T26969)hypothetical protein Y47H9C.9 - Caenorhabditis ele... 39 1.1
GN105678_1(GN105678|pid:none) Sequence 10459 from Patent WO20090... 39 1.1
AY138501_1(AY138501|pid:none) Plasmodium falciparum normocyte bi... 33 1.3
AF312917_1(AF312917|pid:none) Plasmodium falciparum reticulocyte... 33 1.3
AY138503_1(AY138503|pid:none) Plasmodium falciparum normocyte bi... 33 1.3
AY138502_1(AY138502|pid:none) Plasmodium falciparum normocyte bi... 33 1.3
(Q8IDX6) RecName: Full=Reticulocyte-binding protein 2 homolog a;... 33 1.3
AF312916_1(AF312916|pid:none) Plasmodium falciparum reticulocyte... 33 1.3
AY138499_1(AY138499|pid:none) Plasmodium falciparum normocyte bi... 33 1.3
CP001130_480(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 38 1.4
CP001638_2469(CP001638|pid:none) Geobacillus sp. WCH70, complete... 38 1.4
BC019661_1(BC019661|pid:none) Mus musculus cullin 5, mRNA (cDNA ... 38 1.4
AP009179_965(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 38 1.4
(Q9W420) RecName: Full=Transcription elongation factor SPT6; &A... 38 1.9
AF104400_1(AF104400|pid:none) Drosophila melanogaster SPT6 prote... 38 1.9
AF104401_1(AF104401|pid:none) Drosophila melanogaster SPT6 prote... 38 1.9
CP000679_1108(CP000679|pid:none) Caldicellulosiruptor saccharoly... 37 2.5
AX239571_1(AX239571|pid:none) Sequence 14 from Patent WO0164874. 37 2.5
AB463303_1(AB463303|pid:none) Synthetic construct DNA, clone: pF... 37 3.2
AL832338_1(AL832338|pid:none) Homo sapiens mRNA; cDNA DKFZp451K2... 37 3.2
BC143465_1(BC143465|pid:none) Homo sapiens membrane metallo-endo... 37 3.2
GN103254_1(GN103254|pid:none) Sequence 8035 from Patent WO200903... 37 3.2
(Q6PAM1) RecName: Full=Alpha-taxilin; &AK141252_1(AK141252|pid:... 37 3.2
AX239574_1(AX239574|pid:none) Sequence 17 from Patent WO0164874. 37 3.2
BC080578_1(BC080578|pid:none) Homo sapiens taxilin alpha, mRNA (... 37 3.2
BX569693_18(BX569693|pid:none) Synechococcus sp. WH8102 complete... 37 4.2
J03779_1(J03779|pid:none) Human common acute lymphoblastic leuke... 37 4.2
(P08473) RecName: Full=Neprilysin; EC=3.4.24.11; AltNam... 37 4.2
(Q61391) RecName: Full=Neprilysin; EC=3.4.24.11; AltNam... 37 4.2
CR857100_1(CR857100|pid:none) Pongo abelii mRNA; cDNA DKFZp469M0... 37 4.2
AB385522_1(AB385522|pid:none) Synthetic construct DNA, clone: pF... 37 4.2
CP000825_1451(CP000825|pid:none) Prochlorococcus marinus str. MI... 37 4.2
CR382139_561(CR382139|pid:none) Debaryomyces hansenii strain CBS... 37 4.2
BC066840_1(BC066840|pid:none) Mus musculus membrane metallo endo... 37 4.2
CR860855_1(CR860855|pid:none) Pongo abelii mRNA; cDNA DKFZp469N0... 37 4.2
CR926400_1(CR926400|pid:none) Xenopus tropicalis finished cDNA, ... 37 4.2
CU179680_131(CU179680|pid:none) Mycoplasma agalactiae PG2 chromo... 37 4.2
HYRBN(A29451;I46872)neprilysin (EC 3.4.24.11) - rabbit 37 4.2
AB179113_1(AB179113|pid:none) Macaca fascicularis testis cDNA cl... 37 4.2
M81591_1(M81591|pid:none) Murine CD10 neutral endopeptidase 24.1... 37 4.2
(Q5RE69) RecName: Full=Neprilysin; EC=3.4.24.11; AltNam... 37 4.2
CP000679_2656(CP000679|pid:none) Caldicellulosiruptor saccharoly... 36 5.5
AL844504_111(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.5
AP008971_1455(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 36 5.5
(A6LU43) RecName: Full=N utilization substance protein B homolog... 36 5.5
AB180242_1(AB180242|pid:none) Clostridium difficile slpA gene fo... 36 5.5
BA000026_848(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 36 7.2
CP000923_1678(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 36 7.2
AJ504805_1(AJ504805|pid:none) Arabidopsis thaliana mRNA for SMC3... 35 9.4
BC151304_1(BC151304|pid:none) Bos taurus lamin B1, mRNA (cDNA cl... 35 9.4
AK221283_1(AK221283|pid:none) Arabidopsis thaliana mRNA for puta... 35 9.4
AL139008_4(AL139008|pid:none) Human DNA sequence from clone RP11... 35 9.4
CR932272_1(CR932272|pid:none) Centrin-binding protein, complete ... 35 9.4
AM910994_621(AM910994|pid:none) Plasmodium knowlesi strain H chr... 35 9.4
AC007290_6(AC007290|pid:none) Arabidopsis thaliana chromosome 2 ... 35 9.4
AE017354_297(AE017354|pid:none) Legionella pneumophila subsp. pn... 35 9.4
F84669(F84669)probable chromosome associated protein [imported] ... 35 9.4
CR382139_551(CR382139|pid:none) Debaryomyces hansenii strain CBS... 35 9.4

>(Q54CS2) RecName: Full=Cullin-4; Short=CUL-4; AltName:
Full=Cullin-D;
Length = 802

Score = 761 bits (1964), Expect(3) = 0.0
Identities = 403/478 (84%), Positives = 411/478 (85%)
Frame = +3

Query: 894 LKKGFNPMLNGNRLEHLGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEXTLIQ 1073
L+KGFN M+NG+RLE LGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKE TLIQ
Sbjct: 313 LEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEATLIQ 372

Query: 1074 DLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGGKR 1253
DLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGGKR
Sbjct: 373 DLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPAELVARFIDSKLKVGGKR 432

Query: 1254 ML*EELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTEC 1433
M EELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTEC
Sbjct: 433 MSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLKTEC 492

Query: 1434 GTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLP 1613
GTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLP
Sbjct: 493 GTTFTAKLEEMFKDIELSNDIMNSFRDSPMTQNFKSIEMNIYVLTSGNWPIQPPIEATLP 552

Query: 1614 KEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFND 1793
KEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFND
Sbjct: 553 KEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFND 612

Query: 1794 VIDGGELSFRDIQANTGLAIPEXXXXXXXXXXXXXDILIQKKXXXXXXXXXXXXXXXXXX 1973
VIDGGELSFRDIQANTGLAIPE DILIQKK
Sbjct: 613 VIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSS 672

Query: 1974 XXXXXXXXXXXXXXKTKVIDETDTXXXXXXXXXXXXXXXVNSIQIQETVEENQKTNENII 2153
KTKVIDETDT VNSIQIQETVEENQKTNENII
Sbjct: 673 ASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENII 732

Query: 2154 SDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILLKRIFM*R 2327
SDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEIL+++ ++ R
Sbjct: 733 SDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILIEKEYLCR 790

Score = 37.4 bits (85), Expect(3) = 0.0
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1

Query: 826 QSTKKQLMSMLYSQLIQKHVHVILRK 903
QSTKKQLM++L QLI++HV VIL K
Sbjct: 290 QSTKKQLMAVLDRQLIERHVDVILEK 315

Score = 23.1 bits (48), Expect(3) = 0.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1

Query: 2308 KEYLCRDP 2331
KEYLCRDP
Sbjct: 785 KEYLCRDP 792

Score = 506 bits (1304), Expect(2) = e-142
Identities = 258/262 (98%), Positives = 258/262 (98%)
Frame = +2

Query: 38 NTVKXIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSL 217
NTVK IWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSL
Sbjct: 176 NTVKSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSL 235

Query: 218 NIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQ 397
NIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQ
Sbjct: 236 NIYTKFEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQ 295

Query: 398 LMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQ 577
LMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQ
Sbjct: 296 LMAVLDRQLIERHVDVILEKGFNAMVNGDRLEDLGKLYQLLNSVGEIKKIKESWQSYIKQ 355

Query: 578 TGIQMLNDKEKEXTLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPA 757
TGIQMLNDKEKE TLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPA
Sbjct: 356 TGIQMLNDKEKEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQNKPA 415

Query: 758 ELVARFIDSKLKVGGKRML*EE 823
ELVARFIDSKLKVGGKRM EE
Sbjct: 416 ELVARFIDSKLKVGGKRMSEEE 437

Score = 24.3 bits (51), Expect(2) = e-142
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3

Query: 3 LYLDRTYVIXN 35
LYLDRTYVI N
Sbjct: 164 LYLDRTYVIQN 174

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,069,735,028
Number of extensions: 53873098
Number of successful extensions: 153905
Number of sequences better than 10.0: 298
Number of HSP's gapped: 153120
Number of HSP's successfully gapped: 662
Length of query: 777
Length of database: 1,051,180,864
Length adjustment: 137
Effective length of query: 640
Effective length of database: 607,772,281
Effective search space: 388974259840
Effective search space used: 388974259840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.53 alm: 0.37 top: 0.53 tms: 0.00 mit: 0.09 mip: 0.00
nuc: 0.03 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.33 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
36.0 %: cytoplasmic
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vacuolar

>> prediction for Contig-U15258-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0