| Contig-U02963-1 |
| Contig ID |
Contig-U02963-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
518 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
3786591 |
| End point |
3787109 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U02963 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6. 9 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 5.24 |
| Homology vs DNA |
Query= Contig-U02963-1 (Contig-U02963-1Q) /CSM_Contig/Contig-U02963-1Q.Seq.d
(518 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ328133) Dictyostelium discoideum cDNA clone:dda23g02, 5' ... 609 0.0 3
(CF443885) EST680230 normalized cDNA library of onion Allium... 60 9e-15 3
(CF447251) EST683596 normalized cDNA library of onion Allium... 60 1e-14 3
(BG226984) kp95a12.y1 TBN95TM-SSR Strongyloides stercoralis ... 48 3e-12 3
(BG227001) kp95c12.y1 TBN95TM-SSR Strongyloides stercoralis ... 48 5e-12 3
(FD432325) Atr01b_127_E02_C010.g1 FGP Male Amborella trichop... 50 4e-09 2
(CF450348) EST686693 normalized cDNA library of onion Allium... 60 4e-09 3
(CO512913) s13dSG86C0500034_121752 Glandular trichomes Medic... 46 5e-08 3
(EY108029) CAZI5552.fwd CAZI Artemisia annua normalized leaf... 48 6e-08 2
(AM846869) Nicotiana tabacum EST, clone nt005022085. 54 5e-07 2
(FC815216) Sr_pAMT7_02g09_T7 S. ratti mixed stage pAMP Stron... 54 2e-06 2
(AL925764) Danio rerio EST sequence, clone 159-H07-2. 46 3e-06 2
(GE546964) CCHS5860.b1_H01.ab1 CCHS Espina Barnadesia spinos... 52 5e-06 3
(DW047400) CLLX14056.b1_O10.ab1 CLL(XYZ) lettuce saligna Lac... 52 6e-06 2
(DY977490) CLSS11264.b1_P07.ab1 CLS(LMS) lettuce sativa Lact... 52 6e-06 2
(DW047812) CLLX14447.b1_M12.ab1 CLL(XYZ) lettuce saligna Lac... 52 6e-06 2
(DW114710) CLRY2831.b1_N11.ab1 CLR(XYZ) lettuce serriola Lac... 52 6e-06 2
(DW165615) CLVY4151.b1_N06.ab1 CLV(XYZ) lettuce virosa Lactu... 52 6e-06 2
(DW051335) CLLX4113.b1_A22.ab1 CLL(XYZ) lettuce saligna Lact... 52 6e-06 2
(DW137923) CLSY5362.b1_D22.ab1 CLS(XYZ) lettuce sativa Lactu... 52 6e-06 2
(DY978919) CLSS12628.b1_H14.ab1 CLS(LMS) lettuce sativa Lact... 52 6e-06 2
(DW138209) CLSY5626.b1_C16.ab1 CLS(XYZ) lettuce sativa Lactu... 52 6e-06 2
(DW170296) CLVY8608.b1_P15.ab1 CLV(XYZ) lettuce virosa Lactu... 52 6e-06 2
(DW136373) CLSY3928.b1_O21.ab1 CLS(XYZ) lettuce sativa Lactu... 52 6e-06 2
(DW049770) CLLX2539.b1_E12.ab1 CLL(XYZ) lettuce saligna Lact... 52 6e-06 2
(BQ995183) QGF9E20.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ... 52 6e-06 2
(EX854922) CBNF11068.fwd CBNF Phycomyces blakesleeanus NRRL1... 50 1e-05 2
(CK253173) EST736810 potato callus cDNA library, normalized ... 44 2e-05 2
(EE614848) CHWM2288.b1_P20.ab1 CHW(LMS) silverleaf sunflower... 50 2e-05 2
(EE606691) CHWL2030.b1_L03.ab1 CHW(LMS) silverleaf sunflower... 50 2e-05 2
(EL354740) CCEM11406.b1_K20.ab1 CCE(LMS) endive Cichorium en... 48 2e-05 2
(EE614759) CHWM2198.b1_K22.ab1 CHW(LMS) silverleaf sunflower... 50 2e-05 2
(EE618558) CHWM5867.b1_F03.ab1 CHW(LMS) silverleaf sunflower... 50 2e-05 2
(EL356632) CCEM1420.b1_G20.ab1 CCE(LMS) endive Cichorium end... 48 2e-05 2
(EE618544) CHWM5852.b1_G23.ab1 CHW(LMS) silverleaf sunflower... 50 2e-05 2
(DW102464) CLPZ5072.b1_O19.ab1 CLP(XYZ) lettuce perennis Lac... 48 2e-05 2
(EL356196) CCEM12753.b1_A21.ab1 CCE(LMS) endive Cichorium en... 48 2e-05 2
(DR528639) WS02728.C21_F02 SS-IL-A-FL-14 Picea sitchensis cD... 52 6e-05 2
(DT585947) wmi03-3ms4-e03 Wmi03 Welwitschia mirabilis cDNA c... 48 6e-05 2
(DR483177) WS02810.B21_K04 SS-IB-A-FL-13 Picea sitchensis cD... 52 6e-05 2
(GH288022) WS0464.CR_M20 SS-BD-31 Picea sitchensis cDNA clon... 52 6e-05 2
(GH285738) WS0461.CR_J23 SS-BD-31 Picea sitchensis cDNA clon... 52 6e-05 2
(GH287655) WS0464.C21_M20 SS-BD-31 Picea sitchensis cDNA clo... 52 6e-05 2
(ES873075) WS02840.CR_C11 SS-IB-A-FL-13 Picea sitchensis cDN... 52 6e-05 2
(GH285365) WS0461.C21_J23 SS-BD-31 Picea sitchensis cDNA clo... 52 6e-05 2
(EH770120) CNSM2739.b1_E13.ab1 CNS(LMS) yellow starthistle C... 48 9e-05 2
(EH771923) CNSM4491.b1_E20.ab1 CNS(LMS) yellow starthistle C... 48 9e-05 2
(EH773511) CNSM5943.b1_N21.ab1 CNS(LMS) yellow starthistle C... 48 9e-05 2
(EF084961) Picea sitchensis clone WS02810_K04 unknown mRNA. 52 1e-04 2
(AI974454) T110402e KV0 Medicago truncatula cDNA clone pKV0-... 52 1e-04 2
(CX535236) s13dNF37B05MJ045_388649 Methyl Jasmonate-Elicited... 52 1e-04 2
(AW125936) N100131e rootphos(-) Medicago truncatula cDNA clo... 52 1e-04 2
(AU288442) Zinnia elegans cDNA, clone:Z2868, primer:M13 forw... 52 1e-04 2
(EY474937) METAA84TF JCVI-MT3 Medicago truncatula cDNA 5', m... 52 2e-04 2
(EV260074) MTYE349TF JCVI-MT1 Medicago truncatula cDNA 5', m... 52 2e-04 2
(EY474018) META081TF JCVI-MT3 Medicago truncatula cDNA 5', m... 52 2e-04 2
(EY475664) METAI82TF JCVI-MT3 Medicago truncatula cDNA 5', m... 52 2e-04 2
(DW016960) EST1225921 MTY Medicago truncatula cDNA clone MTY... 52 2e-04 2
(DW015893) EST1224854 MTY Medicago truncatula cDNA clone MTY... 52 2e-04 2
(FC748591) CBBI4013.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 42 7e-04 2
(GE542575) CCHS2891.b1_E04.ab1 CCHS Espina Barnadesia spinos... 44 7e-04 3
(FC688460) CAXX20087.fwd CAXX Lottia gigantea from male gona... 42 7e-04 2
(FC588701) CAXP4786.fwd CAXP Lottia gigantea from head, foot... 42 8e-04 2
(GE536626) CCHS23136.b1_O23.ab1 CCHS Espina Barnadesia spino... 44 8e-04 3
(GE528670) CCHS15549.b1_J23.ab1 CCHS Espina Barnadesia spino... 44 8e-04 3
(GE539262) CCHS25647.b1_N04.ab1 CCHS Espina Barnadesia spino... 44 9e-04 3
(DY892384) CeleSEQ10595 Cunninghamella elegans pBluescript (... 40 0.001 2
(DW058598) CLLY11226.b1_C23.ab1 CLL(XYZ) lettuce saligna Lac... 44 0.001 2
(EL928068) NY4Tr1_20_B04.g1_A039 NY4 trophonts (NY4Tr1) Icht... 38 0.001 2
(EL922465) NY4Th2_73_D01.b1_A039 NY4 theronts Ichthyophthiri... 38 0.001 2
(GE345809) MEUAS44TF JCVI-MT2 Medicago truncatula cDNA 5', m... 48 0.001 2
(BT014268) Lycopersicon esculentum clone 133493R, mRNA seque... 36 0.005 2
(EL465245) CHTS4168.b1_P10.ab1 CHT(LMS) Jerusalem artichoke ... 42 0.005 2
(DY907297) CHAX2033.b1_B05.ab1 CHA(XYZ) common wild sunflowe... 42 0.005 2
(EL511432) CHEX678.b1_L02.ab1 CHE(XYZ) serpentine sunflower ... 42 0.005 2
(DY926036) CHAY9556.b1_H14.ab1 CHA(XYZ) common wild sunflowe... 42 0.005 2
(DY916956) CHAY12789.b1_J05.ab1 CHA(XYZ) common wild sunflow... 42 0.005 2
(EH695691) CCIM7516.b1_G08.ab1 CCI(LMS) chicory Cichorium in... 42 0.005 2
(EL462238) CHTS16764.b1_G16.ab1 CHT(LMS) Jerusalem artichoke... 42 0.005 2
(EH692756) CCIM4839.b1_M10.ab1 CCI(LMS) chicory Cichorium in... 42 0.005 2
(EH692677) CCIM4767.b1_N15.ab1 CCI(LMS) chicory Cichorium in... 42 0.005 2
(DY919803) CHAY3168.b1_O23.ab1 CHA(XYZ) common wild sunflowe... 42 0.005 2
(GE498851) CCFT1427.b1_E22.ab1 CCF(STU) sunflower Helianthus... 42 0.005 2
(DV105288) chiou01187 Subtractive cDNA library of roots unde... 36 0.005 2
(GE502318) CCFT3244.b1_H19.ab1 CCF(STU) sunflower Helianthus... 42 0.005 2
(GE518667) CCFU3012.b1_H10.ab1 CCF(STU) sunflower Helianthus... 42 0.005 2
(EE640609) CHEM11782.b1_K18.ab1 CHE(LMS) serpentine sunflowe... 42 0.005 2
(DB724858) Solanum lycopersicum cDNA, clone: LEFL2047M02, 5'... 36 0.005 2
(EE648263) CHEM8247.b1_N21.ab1 CHE(LMS) serpentine sunflower... 42 0.005 2
(BW689703) Solanum lycopersicum cDNA, clone: FC16BE03, 5' en... 36 0.005 2
(EH687608) CCIM12342.b1_K13.ab1 CCI(LMS) chicory Cichorium i... 42 0.005 2
(AW398750) EST309250 L. pennellii trichome, Cornell Universi... 36 0.005 2
(DY931647) CHAZ671.b1_M24.ab1 CHA(XYZ) common wild sunflower... 42 0.005 2
(GE503914) CCFT4051.b1_E06.ab1 CCF(STU) sunflower Helianthus... 42 0.005 2
(AW398475) EST308975 L. pennellii trichome, Cornell Universi... 36 0.005 2
(AW738343) EST339770 tomato flower buds, anthesis, Cornell U... 36 0.005 2
(BF114375) EST441965 tomato root, plant at pre-anthesis Sola... 36 0.005 2
(BE450259) EST401146 tomato root, plants pre-anthesis, Corne... 36 0.005 2
(AI484842) EST243103 tomato ovary, TAMU Solanum lycopersicum... 36 0.005 2
(BE458926) EST414218 tomato developing/immature green fruit ... 36 0.005 2
(BP881625) Solanum lycopersicum cDNA, clone: FA20DA05, 5' en... 36 0.005 2
(BP884128) Solanum lycopersicum cDNA, clone: FA27DC05, 5' en... 36 0.005 2
(AW618210) EST314260 L. pennellii trichome, Cornell Universi... 36 0.005 2
(AR548724) Sequence 3855 from patent US 6747137. 54 0.005 1
(AC131248) Medicago truncatula clone mth2-28n22, complete se... 52 0.021 1
(ES259434) WS0381.C21_A08 SS-B-23 Picea sitchensis cDNA clon... 52 0.021 1
(DT626825) EST1159901 Sequencing ESTs from loblolly pine emb... 52 0.021 1
(DT624461) EST1158748 Sequencing ESTs from loblolly pine emb... 52 0.021 1
(DR693193) EST1083281 Normalized pine embryo library, Lib_D ... 52 0.021 1
(DR683381) EST1073457 Normalized pine embryo library, Lib_D ... 52 0.021 1
(DN632270) EST983086 Subtracted pine embryo library, Lib_C P... 52 0.021 1
(DN631972) EST982788 Subtracted pine embryo library, Lib_C P... 52 0.021 1
(DN629223) EST980039 Subtracted pine embryo library, Lib_C P... 52 0.021 1
(DN628941) EST979757 Subtracted pine embryo library, Lib_C P... 52 0.021 1
(DN626575) EST977391 Subtracted pine embryo library, Lib_C P... 52 0.021 1
(DN464752) EST960551 Sequencing ESTs from loblolly pine embr... 52 0.021 1
(DN464325) EST960124 Sequencing ESTs from loblolly pine embr... 52 0.021 1
(DN458064) EST953863 Sequencing ESTs from loblolly pine embr... 52 0.021 1
(DN450246) EST946045 Sequencing ESTs from loblolly pine embr... 52 0.021 1
(DN448607) EST944406 Sequencing ESTs from loblolly pine embr... 52 0.021 1
(DN448545) EST944344 Sequencing ESTs from loblolly pine embr... 52 0.021 1
(CV137472) EST848681 Sequencing ESTs from loblolly pine embr... 52 0.021 1
(CV036203) RTNACL1_57_A07.g1_A029 Roots plus added NaCl Pinu... 52 0.021 1
(BQ655056) NXRV089_G01_F NXRV (Nsf Xylem Root wood Vertical)... 52 0.021 1
(BI397802) NXPV_107_G04_F NXPV (Nsf Xylem Planings wood Vert... 52 0.021 1
(BG894183) kt20b11.y1 Strongyloides ratti L1 pAMP1 v3 Chiape... 52 0.021 1
(FD743079) WS04222.C21_E21 SS-NE-27 Picea sitchensis cDNA cl... 52 0.021 1
(FD730471) WS03734.C21_L16 SS-B-N-22 Picea sitchensis cDNA c... 52 0.021 1
(EY474048) META116TF JCVI-MT3 Medicago truncatula cDNA 5', m... 52 0.021 1
(EX416069) GQ03704.B7_C09 GQ037 - Shoot tip - Dormant Picea ... 52 0.021 1
(EX402159) GQ03504.B7_D21 GQ035 - Needles - End of season Pi... 52 0.021 1
(EX359362) GQ03201.B7_O10 GQ032 - Shoot tip (Normalized libr... 52 0.021 1
(ES667424) WS0412.C21_L16 SS-NE-A-26 Picea sitchensis cDNA c... 52 0.021 1
(AP005014) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 36 0.027 4
(EL401636) CFFS1286.b1_L09.ab1 CFF(LMS) safflower Carthamus ... 36 0.046 3
(DY618180) AC4461 NOLLY Medicago truncatula cDNA 5', mRNA se... 44 0.046 2
(EH770765) CNSM3386.b1_D08.ab1 CNS(LMS) yellow starthistle C... 36 0.047 3
(EL403655) CFFS1586.b1_C13.ab1 CFF(LMS) safflower Carthamus ... 36 0.050 3
(CK246139) EST729776 potato callus cDNA library, normalized ... 36 0.066 2
(CK260957) EST707035 potato abiotic stress cDNA library Sola... 36 0.066 2
(CK264509) EST710587 potato abiotic stress cDNA library Sola... 36 0.066 2
(CK270438) EST716516 potato abiotic stress cDNA library Sola... 36 0.066 2
(DV624040) 93531.1 Cold Sweetening C Solanum tuberosum cDNA ... 36 0.067 2
(EG012832) STDB001I11u STDB Solanum tuberosum cDNA clone STD... 36 0.067 2
(BE342547) EST395391 potato stolon, Cornell University Solan... 36 0.067 2
(BE342765) EST395609 potato stolon, Cornell University Solan... 36 0.068 2
(CR382125) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 50 0.084 1
(EX854921) CBNF11068.rev CBNF Phycomyces blakesleeanus NRRL1... 50 0.084 1
(GE608466) CCPX5468.b1_G23.ab1 CCP(UWX) Globe Artichoke Cyna... 36 0.15 3
(CU233472) Populus EST from severe drought-stressed opposite... 34 0.25 2
(DB885668) Populus nigra mRNA, clone: PnFL2-061_J18, 5'end. 34 0.25 2
(DW166825) CLVY5280.b1_O24.ab1 CLV(XYZ) lettuce virosa Lactu... 36 0.26 2
(EJ099872) 1095467005179 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.33 1
(CZ948820) 260997 Tomato EcoRI BAC Library Solanum lycopersi... 48 0.33 1
(CF451100) EST687445 normalized cDNA library of onion Allium... 48 0.33 1
(FG298891) 1108793323556 New World Screwworm Larvae 9387 EST... 48 0.33 1
(CX833241) ACAC-aaa04e02.g1 Hydra EST UCI 7 Hydra magnipapil... 42 0.49 2
(EJ074577) 1095458111753 Global-Ocean-Sampling_GS-26-01-01-1... 42 0.68 2
(FP102468) Brassica rapa subsp. pekinensis clone KBrH034A12,... 36 0.73 2
(EK330353) 1095467022059 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.93 2
(CA813183) CA48LN08IVF-E5 Cabernet Sauvignon Leaf - CA48LN V... 36 1.1 2
(EK146433) 1095456024108 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.3 1
(EE663748) 020224AAYA004352CR (AAYA) Royal Gala 126 DAFB fru... 46 1.3 1
(BY882237) Cryptomeria japonica cDNA clone: CMFL012_P15, 5'e... 46 1.3 1
(BG520313) ps18d08.y2 Trichinella spiralis ML CMVsport jasme... 46 1.3 1
(ES569633) TPAF-aaa51f10.g1 T.spiralis_EST Trichinella spira... 46 1.3 1
(ES567657) TPAF-aab13e01.g1 T.spiralis_EST Trichinella spira... 46 1.3 1
(ES567368) TPAF-aab89d05.g1 T.spiralis_EST Trichinella spira... 46 1.3 1
(ES561895) TPAF-aaa62e10.g1 T.spiralis_EST Trichinella spira... 46 1.3 1
(BI264316) NF118F12PL1F1103 Phosphate starved leaf Medicago ... 38 1.9 2
(CF518747) CAP0007_IVF_A02 Vitis vinifera cv. cabernet sauvi... 36 1.9 2
(EE107418) SCB05062 Inflorescence with GA3 (VvS12) Vitis vin... 36 2.0 2
(EK520419) 1095515517629 Global-Ocean-Sampling_GS-32-01-01-1... 38 2.0 2
(CF513499) CAbud0007_IF_C12 Vitis vinifera cv. cabernet sauv... 36 2.3 2
(DY582588) B015-B9 Acropora millepora prawn chip library B A... 38 2.4 2
(DN183830) HO16D01S HO Hordeum vulgare cDNA clone HO16D01 5-... 32 2.5 3
(AJ469263) Hordeum vulgare EST clone S0000800192F06F1. 32 2.7 3
(BJ470310) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 32 3.0 3
(CD056357) HO11P20S HO Hordeum vulgare cDNA clone HO11P20 5-... 32 3.3 3
(CU494013) Theobroma cacao, mRNA sequence (KZ0AAD1YL14). 32 3.4 2
(DY825056) CTOY16641.b1_B09.ab1 CTO(XYZ) dandelion Taraxacum... 32 3.4 2
(DY823785) CTOY15465.b1_B03.ab1 CTO(XYZ) dandelion Taraxacum... 32 3.4 2
(CU531089) Theobroma cacao, mRNA sequence (KZ0AAK12YO13FM1). 32 3.5 2
(CU544201) Theobroma cacao, mRNA sequence (KZ0AAV9YL19FM1). 32 3.5 2
(CU544196) Theobroma cacao, mRNA sequence (KZ0AAV9YL08FM1). 32 3.5 2
(AV836459) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 32 3.5 3
(DB927295) Manihot esculenta mRNA, clone: CAS01_021_B09, 5'end. 32 3.5 2
(DB925546) Manihot esculenta mRNA, clone: CAS01_016_D18, 5'end. 32 3.5 2
(CU506043) Theobroma cacao, mRNA sequence (KZ0ACAB8YE06FM1). 32 3.5 2
(AC169180) Medicago truncatula chromosome 7 BAC clone mth2-5... 40 3.6 2
(CA012126) HT04I11r HT Hordeum vulgare subsp. vulgare cDNA c... 32 3.8 3
(BI778291) EBro07_SQ002_M11_R root, 3 week, reduced light, c... 32 4.1 3
(GH210897) HVSMEa0013H21f2 Hordeum vulgare seedling shoot (c... 32 4.3 3
(DN177851) HO36E04S HO Hordeum vulgare cDNA clone HO36E04 5-... 32 4.3 3
(CA032467) HX13C04r HX Hordeum vulgare subsp. vulgare cDNA c... 32 4.4 3
(BQ472519) HB09F08T BC Hordeum vulgare subsp. vulgare cDNA c... 32 4.8 3
(AC118009) Mus musculus chromosome 8, clone RP23-442H2, comp... 44 5.2 1
(AC194550) Pan troglodytes BAC clone CH251-448G21 from chrom... 44 5.2 1
(AC231969) Homo sapiens FOSMID clone ABC14-1080522N1 from ch... 44 5.2 1
(AC017028) Homo sapiens BAC clone RP11-275G7 from 2, complet... 44 5.2 1
(AC141558) Mus musculus chromosome 8 clone RP23-284L8 map 8,... 44 5.2 1
(AC125658) Rattus norvegicus clone CH230-10N22, WORKING DRAF... 44 5.2 1
(AC105672) Rattus norvegicus clone CH230-59F9, WORKING DRAFT... 44 5.2 1
(AC219675) Bos taurus clone CH240-325N19, WORKING DRAFT SEQU... 44 5.2 1
(AC202721) Pan troglodytes chromosome 2 clone CH251-487K4, W... 44 5.2 1
(AC198365) Zea mays chromosome 5 clone CH201-31G14; ZMMBBc00... 44 5.2 1
(AC183413) Zea mays chromosome 5 clone ZMMBBb-98M14; ZMMBBb0... 44 5.2 1
(AC168011) Bos taurus clone CH240-191M17, WORKING DRAFT SEQU... 44 5.2 1
(AC022705) Homo sapiens chromosome 2 clone RP11-41N4 map 2, ... 44 5.2 1
(DH079719) Oryzias latipes Fosmid clone:GOLWFno158_h04, reve... 44 5.2 1
(EE213892) c4c15z2.f1 Danio rerio 12am (night) eye/brain cDN... 44 5.2 1
(DR745774) RTCU1_32_A12.g1_A029 Roots plus added copper Pinu... 44 5.2 1
(DR682216) EST1072291 Normalized pine embryo library, Lib_D ... 44 5.2 1
(DR181210) RTMNUT1_37_B07.g2_A029 Roots minus micronutrients... 44 5.2 1
(DC936038) Physcomitrella patens subsp. patens cDNA, clone:p... 44 5.2 1
(DC909920) Physcomitrella patens subsp. patens cDNA, clone:p... 44 5.2 1
(DC432527) Cryptomeria japonica cDNA, clone: CC15527, 5' end... 44 5.2 1
(DC430405) Cryptomeria japonica cDNA, clone: CC12740, 5' end... 44 5.2 1
(DC429786) Cryptomeria japonica cDNA, clone: CC12010, 5' end... 44 5.2 1
(CF667624) RTCNT1_31_B09.g1_A029 Root control Pinus taeda cD... 44 5.2 1
(BY980400) Physcomitrella patens subsp. patens cDNA clone: P... 44 5.2 1
(BY949282) Physcomitrella patens subsp. patens cDNA clone: P... 44 5.2 1
(BY889718) Cryptomeria japonica cDNA clone: CMFL033_H19, 5'e... 44 5.2 1
(BY752129) Mus musculus activated spleen cDNA, RIKEN full-le... 44 5.2 1
(BW986985) Chamaecyparis obtusa cDNA, clone: CO00486, 3' end... 44 5.2 1
(BU634828) 025E05 Infected Arabidopsis Leaf Arabidopsis thal... 44 5.2 1
(BQ702683) NXSI_131_C12_F NXSI (Nsf Xylem Side wood Inclined... 44 5.2 1
(GE537347) CCHS23827.b1_E05.ab1 CCHS Espina Barnadesia spino... 44 5.2 1
(FF395091) MOODV01TR MOO Vigna unguiculata cDNA 3', mRNA seq... 36 5.3 2
(BQ765685) EBro03_SQ007_J21_R root, 3 week, waterlogged, cv ... 32 5.3 3
(FF402577) MOODV01TF MOO Vigna unguiculata cDNA 5', mRNA seq... 36 5.6 2
(BE602718) HVSMEh0101E21f Hordeum vulgare 5-45 DAP spike EST... 32 5.7 3
(CK124020) BES1824106j05 BES1824 Hordeum vulgare subsp. vulg... 32 6.0 3
(GO010720) LJGBM85TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA ... 36 6.1 2
(FG867726) UCRVU07_CCNP4736_b1 Cowpea UCR 779 Mixed Tissue a... 36 6.1 2
(EV271476) GLMB773TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 36 6.6 2
(GO032162) LJNAI87TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA ... 36 6.6 2
(FL508275) 0221814 Adonis aestivalis flower Adonis aestivali... 36 6.9 2
(ES719514) C20R7_11_G05_E002.g1 USDA-Tifton Peanut Library C... 36 7.1 2
(FG985956) GLLBO42TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 36 7.3 2
(FE684025) Pv042D_M13F_C10.ab1 Phaseolus vulgaris cv Early g... 36 7.3 2
(FE698379) Pv058D_M13F_F10.ab1 Phaseolus vulgaris cv Early g... 36 7.3 2
(BF621764) HVSMEa0012H21f Hordeum vulgare seedling shoot EST... 32 7.3 3
(FG889292) UCRVU08_CCNS10648_b1 Cowpea IT97K-461-4 Mixed Tis... 36 7.4 2
(AC119764) Rattus norvegicus clone CH230-53E8, WORKING DRAFT... 38 7.7 3
(FD795803) 08VNNA8_T7_043_B11_3MAR2006_093 08VNAA8 Phaseolus... 36 7.7 2
(CR962122) Medicago truncatula chromosome 5 clone mte1-46l20... 38 8.0 4
(EK343048) 1095467075850 Global-Ocean-Sampling_GS-31-01-01-1... 40 8.4 2
(EV268018) GLMA164TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 36 8.6 2
(EV267193) GLLBF89TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 36 8.6 2
(FF554772) MOPEC56TF MOP Vigna unguiculata cDNA 5', mRNA seq... 36 8.7 2
(EH042654) AS1RN25P1B03.ab1 Healthy Roots (RN) Arachis steno... 36 8.9 2
(AL772426) Oryza sativa chromosome 12, . BAC OJ1310_C03 of l... 36 8.9 5
(FE684022) Pv028D_M13F_H05.ab1 Phaseolus vulgaris cv Early g... 36 9.0 2
(EJ823871) 1093017551288 Global-Ocean-Sampling_GS-30-02-01-1... 38 9.2 2
(AC183492) Brassica oleracea Contig G, complete sequence. 32 9.2 2
(EK292163) 1095462334054 Global-Ocean-Sampling_GS-31-01-01-1... 34 9.4 2
(AC101169) Mus musculus clone RP23-174E7, LOW-PASS SEQUENCE ... 36 9.6 2
(AC168637) Strongylocentrotus purpuratus clone R3-3018H13, W... 36 9.8 6
>(BJ328133) Dictyostelium discoideum cDNA clone:dda23g02, 5' end,
single read.
Length = 519
Score = 609 bits (307), Expect(3) = 0.0
Identities = 307/307 (100%)
Strand = Plus / Plus
Query: 212 gtcatacagaggatgatgatagattagttcgtgtatatgctgatggtatttatgatttat 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gtcatacagaggatgatgatagattagttcgtgtatatgctgatggtatttatgatttat 271
Query: 272 ttcattttggtcatgcaagatcacttcaacaagcaaaatctttattcaaaaatacttatc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttcattttggtcatgcaagatcacttcaacaagcaaaatctttattcaaaaatacttatc 331
Query: 332 ttatagttggagtatgtaatgatgaaattacacataaattaaaaggtaaaacagttatga 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttatagttggagtatgtaatgatgaaattacacataaattaaaaggtaaaacagttatga 391
Query: 392 atggtgaagaaagagcagaatcattgagacattgtagatgggttgatgaagttgtagaga 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atggtgaagaaagagcagaatcattgagacattgtagatgggttgatgaagttgtagaga 451
Query: 452 atgcaccatgggtagtaacacaagagtttattgatcaacacaatatagactacgtttcac 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgcaccatgggtagtaacacaagagtttattgatcaacacaatatagactacgtttcac 511
Query: 512 atgggga 518
|||||||
Sbjct: 512 atgggga 518
Score = 95.6 bits (48), Expect(3) = 0.0
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 64 gatgatttagaattaccaccaatgccactatcttttatagatacatct 111
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gatgatttagaattaccaccaatgccactatcttttatagatacatct 111
Score = 73.8 bits (37), Expect(3) = 0.0
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 119 gaactgaatcattattaccaggaacatcatcatcttc 155
|||||||||||||||||||||||||||||||||||||
Sbjct: 119 gaactgaatcattattaccaggaacatcatcatcttc 155
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 482,556,315
Number of extensions: 29043874
Number of successful extensions: 2419065
Number of sequences better than 10.0: 260
Length of query: 518
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 495
Effective length of database: 99,442,330,388
Effective search space: 49223953542060
Effective search space used: 49223953542060
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.21 |
| Homology vs Protein |
Query= Contig-U02963-1 (Contig-U02963-1Q) /CSM_Contig/Contig-U02963-1Q.Seq.d
(518 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM434804_3(AM434804|pid:none) Vitis vinifera contig VV78X033615.... 171 1e-41
AM428102_1(AM428102|pid:none) Vitis vinifera contig VV78X080491.... 170 2e-41
GN100865_1(GN100865|pid:none) Sequence 5646 from Patent WO200903... 163 3e-39
BT033176_1(BT033176|pid:none) Zea mays full-length cDNA clone ZM... 163 3e-39
D58404_1(D58404|pid:none) Brassica napus mRNA for CTP:phosphocho... 162 4e-39
AC005700_21(AC005700|pid:none) Arabidopsis thaliana chromosome 2... 159 5e-38
D63167_1(D63167|pid:none) Brassica napus mRNA for CTP:phosphocho... 158 7e-38
D63168_1(D63168|pid:none) Brassica napus mRNA for CTP:phosphocho... 158 7e-38
AB056715_1(AB056715|pid:none) Arabidopsis thaliana AtCCT2 gene f... 158 7e-38
AL161540_35(AL161540|pid:none) Arabidopsis thaliana DNA chromoso... 158 7e-38
GM694687_1(GM694687|pid:none) Sequence 243 from Patent EP1953235. 157 1e-37
EU972033_1(EU972033|pid:none) Zea mays clone 373638 choline-phos... 157 1e-37
EF084961_1(EF084961|pid:none) Picea sitchensis clone WS02810_K04... 157 2e-37
BT071640_1(BT071640|pid:none) Picea sitchensis clone WS0293_K02 ... 153 2e-36
EF678210_1(EF678210|pid:none) Picea sitchensis clone WS0284_H06 ... 153 2e-36
BC133902_1(BC133902|pid:none) Danio rerio phosphate cytidylyltra... 152 5e-36
AE014296_296(AE014296|pid:none) Drosophila melanogaster chromoso... 149 4e-35
(Q811Q9) RecName: Full=Choline-phosphate cytidylyltransferase B;... 146 3e-34
AY189950_1(AY189950|pid:none) Mus musculus CTP:phosphocholine cy... 146 3e-34
AK053577_1(AK053577|pid:none) Mus musculus 0 day neonate eyeball... 146 3e-34
(Q9Y5K3) RecName: Full=Choline-phosphate cytidylyltransferase B;... 146 3e-34
AK296333_1(AK296333|pid:none) Homo sapiens cDNA FLJ50783 complet... 145 8e-34
BC092816_1(BC092816|pid:none) Danio rerio zgc:110237, mRNA (cDNA... 145 8e-34
L28956_1(L28956|pid:none) Mus musculus CTP:phosphocholine cytidy... 144 1e-33
(P49585) RecName: Full=Choline-phosphate cytidylyltransferase A;... 144 1e-33
BC112538_1(BC112538|pid:none) Bos taurus phosphate cytidylyltran... 144 1e-33
AK304534_1(AK304534|pid:none) Homo sapiens cDNA FLJ53135 complet... 144 1e-33
(P19836) RecName: Full=Choline-phosphate cytidylyltransferase A;... 144 1e-33
(P49586) RecName: Full=Choline-phosphate cytidylyltransferase A;... 144 1e-33
L28957_1(L28957|pid:none) Homo sapiens CTP:phosphocholine cytidy... 144 1e-33
BC090387_1(BC090387|pid:none) Xenopus laevis hypothetical protei... 144 2e-33
BT045986_1(BT045986|pid:none) Salmo salar clone ssal-rgf-538-179... 143 2e-33
U03490_1(U03490|pid:none) Rattus norvegicus Wistar CTP:phosphoch... 143 2e-33
BT045054_1(BT045054|pid:none) Salmo salar clone ssal-rgf-510-309... 142 5e-33
BC095130_1(BC095130|pid:none) Danio rerio zgc:110012, mRNA (cDNA... 142 6e-33
(P49584) RecName: Full=Choline-phosphate cytidylyltransferase A;... 141 8e-33
GN100849_1(GN100849|pid:none) Sequence 5630 from Patent WO200903... 141 1e-32
BC109442_1(BC109442|pid:none) Danio rerio zgc:123291, mRNA (cDNA... 140 1e-32
A36001(A36001) choline-phosphate cytidylyltransferase (EC 2.7.7.... 140 2e-32
AE016816_88(AE016816|pid:none) Ashbya gossypii (= Eremothecium g... 139 4e-32
AM920431_243(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 137 2e-31
AP007151_1372(AP007151|pid:none) Aspergillus oryzae RIB40 genomi... 137 2e-31
GN100851_1(GN100851|pid:none) Sequence 5632 from Patent WO200903... 136 3e-31
AM910996_155(AM910996|pid:none) Plasmodium knowlesi strain H chr... 135 8e-31
CR382130_732(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 134 2e-30
CR380948_169(CR380948|pid:none) Candida glabrata strain CBS138 c... 133 2e-30
FN357297_72(FN357297|pid:none) Schistosoma mansoni genome sequen... 132 4e-30
CU928179_477(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 132 5e-30
CR382125_719(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 131 1e-29
GN100863_1(GN100863|pid:none) Sequence 5644 from Patent WO200903... 129 4e-29
AL844509_166(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 129 4e-29
FM992691_55(FM992691|pid:none) Candida dubliniensis CD36 chromos... 128 7e-29
M36827_1(M36827|pid:none) Saccharomyces cerevisiae cholinephosph... 127 2e-28
T15975(T15975)hypothetical protein F08C6.2 - Caenorhabditis eleg... 125 6e-28
(P49583) RecName: Full=Putative choline-phosphate cytidylyltrans... 125 6e-28
U29378_8(U29378|pid:none) Caenorhabditis elegans cosmid F08C6, c... 125 6e-28
CP000498_69(CP000498|pid:none) Pichia stipitis CBS 6054 chromoso... 125 8e-28
FN392320_908(FN392320|pid:none) Pichia pastoris GS115 chromosome... 123 2e-27
AF315035_1(AF315035|pid:none) Plasmodium falciparum phosphocholi... 120 2e-26
(P49587) RecName: Full=Choline-phosphate cytidylyltransferase; ... 120 2e-26
AC024751_2(AC024751|pid:none) Caenorhabditis elegans cosmid Y18H... 114 1e-24
AY811833_1(AY811833|pid:none) Schistosoma japonicum SJCHGC03609 ... 114 1e-24
CU633455_76(CU633455|pid:none) Podospora anserina genomic DNA ch... 109 4e-23
(Q55BZ4) RecName: Full=Ethanolamine-phosphate cytidylyltransfera... 100 4e-20
AL663030_9(AL663030|pid:none) Mouse DNA sequence from clone RP23... 96 4e-19
AL663030_11(AL663030|pid:none) Mouse DNA sequence from clone RP2... 96 4e-19
AK166319_1(AK166319|pid:none) Mus musculus mammary gland RCB-052... 96 4e-19
AY189524_1(AY189524|pid:none) Mus musculus CTP:ethanolaminephosp... 96 5e-19
AE014134_2379(AE014134|pid:none) Drosophila melanogaster chromos... 94 3e-18
EF688571_1(EF688571|pid:none) Gossypium hirsutum ethanolamine-ph... 92 8e-18
AF330161_1(AF330161|pid:none) Rosa hybrid cultivar 'Vivaldi' pho... 91 2e-17
AP004751_6(AP004751|pid:none) Oryza sativa Japonica Group genomi... 91 2e-17
AC078839_9(AC078839|pid:none) Oryza sativa (japonica cultivar-gr... 91 2e-17
AP008214_529(AP008214|pid:none) Oryza sativa (japonica cultivar-... 91 2e-17
AP008216_487(AP008216|pid:none) Oryza sativa (japonica cultivar-... 91 2e-17
AC087079_11(AC087079|pid:none) Caenorhabditis elegans cosmid Y37... 91 2e-17
CT005269_94(CT005269|pid:none) Leishmania major strain Friedlin,... 90 3e-17
AM502250_130(AM502250|pid:none) Leishmania infantum chromosome 32. 90 4e-17
AM494969_98(AM494969|pid:none) Leishmania braziliensis chromosom... 89 8e-17
(Q5EA75) RecName: Full=Ethanolamine-phosphate cytidylyltransfera... 89 8e-17
EF688570_1(EF688570|pid:none) Gossypium hirsutum ethanolamine-ph... 89 8e-17
BC088018_1(BC088018|pid:none) Xenopus tropicalis phosphate cytid... 88 1e-16
AC140023_13(AC140023|pid:none) Medicago truncatula clone mth2-32... 87 2e-16
AY813109_1(AY813109|pid:none) Schistosoma japonicum SJCHGC06128 ... 86 4e-16
BT077764_1(BT077764|pid:none) Lepeophtheirus salmonis Pacific fo... 84 2e-15
AL590450_87(AL590450|pid:none) chromosome XI of strain GB-M1 of ... 84 2e-15
AY198340_1(AY198340|pid:none) Hordeum vulgare subsp. vulgare pho... 83 5e-15
BT084203_1(BT084203|pid:none) Zea mays full-length cDNA clone ZM... 82 6e-15
AC005499_13(AC005499|pid:none) Arabidopsis thaliana chromosome 2... 82 6e-15
AY548926_2(AY548926|pid:none) Antonospora locustae hypothetical ... 82 1e-14
CU914151_19(CU914151|pid:none) Vitis vinifera cv. Cabernet-Sauvi... 80 3e-14
CP000589_224(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 79 9e-14
(Q9UTI6) RecName: Full=Probable ethanolamine-phosphate cytidylyl... 78 1e-13
AK099644_1(AK099644|pid:none) Oryza sativa Japonica Group cDNA c... 78 1e-13
AY232160_1(AY232160|pid:none) Drosophila yakuba clone yak-ad_CG5... 77 2e-13
FM992689_23(FM992689|pid:none) Candida dubliniensis CD36 chromos... 76 4e-13
AE014134_2382(AE014134|pid:none) Drosophila melanogaster chromos... 76 4e-13
AK297996_1(AK297996|pid:none) Homo sapiens cDNA FLJ55495 complet... 75 1e-12
AK316385_1(AK316385|pid:none) Homo sapiens cDNA, FLJ79284 comple... 74 2e-12
AB179284_1(AB179284|pid:none) Macaca fascicularis testis cDNA cl... 74 3e-12
CR940353_164(CR940353|pid:none) Theileria annulata strain Ankara... 73 4e-12
AK301723_1(AK301723|pid:none) Homo sapiens cDNA FLJ51364 complet... 73 4e-12
CU640366_1063(CU640366|pid:none) Podospora anserina genomic DNA ... 73 5e-12
(P33412) RecName: Full=Ethanolamine-phosphate cytidylyltransfera... 72 8e-12
D50644_2(D50644|pid:none) Yeast DNA for CTP: phosphoethanolamine... 72 8e-12
AP007157_896(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 71 1e-11
AL451109_8(AL451109|pid:none) Neurospora crassa DNA linkage grou... 71 2e-11
CR382133_285(CR382133|pid:none) Debaryomyces hansenii strain CBS... 71 2e-11
FN357501_1(FN357501|pid:none) Schistosoma mansoni genome sequenc... 69 5e-11
AE016819_737(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 69 7e-11
CR382123_782(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 66 6e-10
CT005257_136(CT005257|pid:none) Leishmania major strain Friedlin... 65 1e-09
A75041(A75041) probable glycerol-3-phosphate cytidyltransferase ... 63 4e-09
AP006878_2275(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 60 3e-08
CP000821_2947(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 59 7e-08
CP000969_297(CP000969|pid:none) Thermotoga sp. RQ2, complete gen... 58 1e-07
CP000716_1053(CP000716|pid:none) Thermosipho melanesiensis BI429... 58 1e-07
CP000961_1676(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 58 1e-07
(P27623) RecName: Full=Glycerol-3-phosphate cytidylyltransferase... 57 4e-07
CP000496_71(CP000496|pid:none) Pichia stipitis CBS 6054 chromoso... 56 5e-07
U39678_4(U39678|pid:none) Caenorhabditis elegans cosmid C39D10, ... 56 6e-07
CR378671_270(CR378671|pid:none) Photobacterium profundum SS9; se... 56 6e-07
T15782(T15782)hypothetical protein C39D10.3 - Caenorhabditis ele... 55 1e-06
AP008934_2078(AP008934|pid:none) Staphylococcus saprophyticus su... 55 1e-06
AP009484_651(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 55 1e-06
CP000517_428(CP000517|pid:none) Lactobacillus helveticus DPC 457... 55 1e-06
AM295250_288(AM295250|pid:none) Staphylococcus carnosus subsp. c... 54 2e-06
CP000813_3183(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 54 3e-06
CP000491_507(CP000491|pid:none) Paracoccus denitrificans PD1222 ... 54 3e-06
AP009493_1552(AP009493|pid:none) Streptomyces griseus subsp. gri... 53 4e-06
CR931653_17(CR931653|pid:none) Streptococcus pneumoniae strain 1... 53 4e-06
(Q8RKI6) RecName: Full=Glycerol-3-phosphate cytidylyltransferase... 53 5e-06
EU374214_11(EU374214|pid:none) Campylobacter coli strain GB50 he... 53 5e-06
CP000264_819(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 53 5e-06
AE015929_415(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 53 5e-06
AY357726_3(AY357726|pid:none) Actinobacillus pleuropneumoniae se... 52 7e-06
AP009178_1257(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 52 7e-06
CR931674_18(CR931674|pid:none) Streptococcus pneumoniae strain G... 52 7e-06
CR931671_16(CR931671|pid:none) Streptococcus pneumoniae strain 8... 52 9e-06
AE017198_1529(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 52 1e-05
AP009324_638(AP009324|pid:none) Staphylococcus aureus subsp. aur... 51 1e-05
CR931654_18(CR931654|pid:none) Streptococcus pneumoniae strain 8... 51 1e-05
AJ938182_591(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 51 1e-05
AP006716_2255(AP006716|pid:none) Staphylococcus haemolyticus JCS... 51 1e-05
AP006627_3092(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 51 1e-05
AJ544861_5(AJ544861|pid:none) Thermotoga sp strain RQ2 rhamnose ... 50 3e-05
AI1210(AI1210) glycerol-3-phosphate cytidylyltransferase (gct), ... 50 3e-05
BA000016_483(BA000016|pid:none) Clostridium perfringens str. 13 ... 50 3e-05
CP000472_1535(CP000472|pid:none) Shewanella piezotolerans WP3, c... 50 3e-05
CP000151_1730(CP000151|pid:none) Burkholderia sp. 383 chromosome... 50 4e-05
CP000821_113(CP000821|pid:none) Shewanella sediminis HAW-EB3, co... 50 4e-05
EU090171_3(EU090171|pid:none) Actinobacillus pleuropneumoniae st... 49 6e-05
AM849034_76(AM849034|pid:none) Clavibacter michiganensis subsp. ... 49 6e-05
AE016830_1090(AE016830|pid:none) Enterococcus faecalis V583, com... 49 6e-05
CP001277_183(CP001277|pid:none) Candidatus Hamiltonella defensa ... 49 7e-05
X87104_3(X87104|pid:none) S.aureus mdr, pbp4 and taqD genes (SG5... 49 7e-05
D89199_1(D89199|pid:none) Schizosaccharomyces pombe mRNA, partia... 49 7e-05
CP000083_4073(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 49 7e-05
CP001022_586(CP001022|pid:none) Exiguobacterium sibiricum 255-15... 49 7e-05
CR931718_17(CR931718|pid:none) Streptococcus pneumoniae strain E... 48 1e-04
AM711867_834(AM711867|pid:none) Clavibacter michiganensis subsp.... 48 2e-04
CP001291_4840(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 48 2e-04
CR931668_18(CR931668|pid:none) Streptococcus pneumoniae strain n... 48 2e-04
AL935252_222(AL935252|pid:none) Lactobacillus plantarum strain W... 47 3e-04
CP001107_2570(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 47 3e-04
CP000750_1818(CP000750|pid:none) Kineococcus radiotolerans SRS30... 47 3e-04
CR931667_9(CR931667|pid:none) Streptococcus pneumoniae strain R1... 46 5e-04
CP001080_582(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 45 8e-04
CP001098_1636(CP001098|pid:none) Halothermothrix orenii H 168, c... 45 8e-04
(Q1CT14) RecName: Full=Bifunctional protein hldE; Includes: Re... 45 0.001
CP000606_3688(CP000606|pid:none) Shewanella loihica PV-4, comple... 45 0.001
CP000151_1747(CP000151|pid:none) Burkholderia sp. 383 chromosome... 45 0.001
CP000413_1470(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 45 0.001
(B6JM82) RecName: Full=Bifunctional protein hldE; Includes: Re... 45 0.001
AE015924_1771(AE015924|pid:none) Porphyromonas gingivalis W83, c... 44 0.002
CP000749_244(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 44 0.002
CP000488_803(CP000488|pid:none) Candidatus Ruthia magnifica str.... 44 0.002
(B5Z7L8) RecName: Full=Bifunctional protein hldE; Includes: Re... 44 0.002
CP001131_2678(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 44 0.002
CP000084_535(CP000084|pid:none) Candidatus Pelagibacter ubique H... 44 0.003
EU670723_31(EU670723|pid:none) Streptomyces flavoviridis culture... 44 0.003
(A7H2L7) RecName: Full=Bifunctional protein hldE; Includes: Re... 43 0.004
(A0RQR9) RecName: Full=Bifunctional protein hldE; Includes: Re... 43 0.004
CP000360_3783(CP000360|pid:none) Acidobacteria bacterium Ellin34... 43 0.004
(Q74BF6) RecName: Full=Bifunctional protein hldE; Includes: Re... 43 0.004
EU255915_15(EU255915|pid:none) Lactococcus lactis subsp. lactis ... 43 0.005
CU651637_2843(CU651637|pid:none) Escherichia coli LF82 chromosom... 43 0.005
AM406671_1571(AM406671|pid:none) Lactococcus lactis subsp. cremo... 43 0.005
CP001358_1373(CP001358|pid:none) Desulfovibrio desulfuricans sub... 43 0.005
AE017261_1010(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 43 0.005
(Q6TG09) RecName: Full=Bifunctional protein hldE; Includes: Re... 42 0.007
(Q3A526) RecName: Full=Bifunctional protein hldE; Includes: Re... 42 0.007
(Q39X60) RecName: Full=Bifunctional protein hldE; Includes: Re... 42 0.007
CP001359_2767(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 42 0.009
(A1W0D6) RecName: Full=Bifunctional protein hldE; Includes: Re... 42 0.009
(A8FMK8) RecName: Full=Bifunctional protein hldE; Includes: Re... 42 0.009
CP000386_700(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 42 0.009
AY422197_18(AY422197|pid:none) Campylobacter jejuni putative ABC... 42 0.009
CP000251_2602(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 42 0.009
CP001275_1783(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 42 0.012
CP001390_2096(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 42 0.012
CP000108_1590(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 42 0.012
CP001344_4427(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 41 0.016
BA000039_1592(BA000039|pid:none) Thermosynechococcus elongatus B... 41 0.016
(A5G6F4) RecName: Full=Bifunctional protein hldE; Includes: Re... 41 0.016
(Q30T22) RecName: Full=Bifunctional protein hldE; Includes: Re... 41 0.016
CP000091_1521(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 41 0.016
AE005176_924(AE005176|pid:none) Lactococcus lactis subsp. lactis... 41 0.020
(Q1IJZ0) RecName: Full=Bifunctional protein hldE; Includes: Re... 41 0.020
CP000743_1287(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 41 0.020
AM849034_2609(AM849034|pid:none) Clavibacter michiganensis subsp... 40 0.026
AM711867_2715(AM711867|pid:none) Clavibacter michiganensis subsp... 40 0.026
CP000769_2558(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 40 0.026
CP001337_1437(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 40 0.026
EF032505_27(EF032505|pid:none) Streptoalloteichus hindustanus st... 40 0.035
CP000113_4585(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 40 0.045
AE005176_218(AE005176|pid:none) Lactococcus lactis subsp. lactis... 40 0.045
CP001251_659(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 40 0.045
CP001322_1926(CP001322|pid:none) Desulfatibacillum alkenivorans ... 40 0.045
CP000961_763(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 40 0.045
CP000678_859(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 39 0.059
FP236842_430(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 39 0.059
(A7GZF6) RecName: Full=Bifunctional protein hldE; Includes: Re... 39 0.077
(Q9A2C5) RecName: Full=Bifunctional protein hldE; Includes: Re... 39 0.077
CP000471_1051(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 39 0.077
CP001230_1893(CP001230|pid:none) Persephonella marina EX-H1, com... 39 0.10
EU016653_56(EU016653|pid:none) Uncultured Group I marine crenarc... 39 0.10
CP000099_2021(CP000099|pid:none) Methanosarcina barkeri str. Fus... 39 0.10
CP001071_1564(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 38 0.13
(A0L7X0) RecName: Full=Bifunctional protein hldE; Includes: Re... 38 0.13
(Q7VFZ3) RecName: Full=Bifunctional protein hldE; Includes: Re... 38 0.13
CP000851_644(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 38 0.13
BX545859_12(BX545859|pid:none) Campylobacter jejuni. 38 0.13
(A7MP93) RecName: Full=Bifunctional protein hldE; Includes: Re... 38 0.17
CP000378_2278(CP000378|pid:none) Burkholderia cenocepacia AU 105... 38 0.17
AE016958_3252(AE016958|pid:none) Mycobacterium avium subsp. para... 38 0.17
(Q3STQ8) RecName: Full=Bifunctional protein hldE; Includes: Re... 37 0.22
AP007255_62(AP007255|pid:none) Magnetospirillum magneticum AMB-1... 37 0.22
(Q2W993) RecName: Full=Bifunctional protein hldE; Includes: Re... 37 0.22
CP000393_2659(CP000393|pid:none) Trichodesmium erythraeum IMS101... 37 0.22
CR753847_19(CR753847|pid:none) Escherichia coli 042 Flag-2 locus. 37 0.29
EU410957_22(EU410957|pid:none) Candidatus Pelagibacter ubique cl... 37 0.29
CP001472_708(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 37 0.29
(A8APT1) RecName: Full=Bifunctional protein hldE; Includes: Re... 37 0.29
(B2VGJ9) RecName: Full=Bifunctional protein hldE; Includes: Re... 37 0.29
AP006841_2579(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 37 0.29
AL445066_207(AL445066|pid:none) Thermoplasma acidophilum complet... 37 0.29
CP000077_1238(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 37 0.29
CP000964_654(CP000964|pid:none) Klebsiella pneumoniae 342, compl... 37 0.38
(Q58436) RecName: Full=Phosphopantetheine adenylyltransferase; ... 37 0.38
CP001341_570(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 37 0.38
(A6TE31) RecName: Full=Bifunctional protein hldE; Includes: Re... 37 0.38
AM747720_695(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 37 0.38
FM992691_104(FM992691|pid:none) Candida dubliniensis CD36 chromo... 37 0.38
AP010904_1911(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 37 0.38
(Q1H3A0) RecName: Full=Bifunctional protein hldE; Includes: Re... 37 0.38
(Q5FS52) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.50
AF163662_1(AF163662|pid:none) Salmonella enterica RfaE mutant (r... 36 0.50
(B0T663) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.50
(Q57JQ9) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.50
(Q2IZP7) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.50
CP000655_1959(CP000655|pid:none) Polynucleobacter necessarius su... 36 0.50
CP001010_1416(CP001010|pid:none) Polynucleobacter necessarius su... 36 0.50
AM260479_138(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 36 0.50
CU633749_80(CU633749|pid:none) Cupriavidus taiwanensis str. LMG1... 36 0.50
BA000002_1487(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 36 0.50
AF163661_1(AF163661|pid:none) Salmonella enterica RfaE (rfaE) ge... 36 0.50
(Q13AN7) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.50
E72454(E72454)hypothetical protein APE2281 - Aeropyrum pernix (s... 36 0.50
CP000505_680(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 36 0.50
CP000103_1780(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 36 0.65
CU459003_4203(CU459003|pid:none) Magnetospirillum gryphiswaldens... 36 0.65
(Q0A4T7) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.65
(Q1QNS3) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.65
(Q8EUG2) RecName: Full=Probable phosphopantetheine adenylyltrans... 36 0.65
CP000613_2472(CP000613|pid:none) Rhodospirillum centenum SW, com... 36 0.65
CP000511_4649(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 36 0.65
(Q5PC86) RecName: Full=Bifunctional protein hldE; Includes: Re... 36 0.65
(Q219E2) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 0.85
CP001144_3226(CP001144|pid:none) Salmonella enterica subsp. ente... 35 0.85
(Q1R1M6) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 0.85
CP001071_1718(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 35 0.85
AM933172_3028(AM933172|pid:none) Salmonella enterica subsp. ente... 35 0.85
AM420293_5400(AM420293|pid:none) Saccharopolyspora erythraea NRR... 35 0.85
AE016823_2135(AE016823|pid:none) Leptospira interrogans serovar ... 35 0.85
(A6W0Z9) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 0.85
CP000473_7315(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 35 0.85
CP000352_76(CP000352|pid:none) Ralstonia metallidurans CH34, com... 35 0.85
(A4Y9Z9) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 1.1
(Q0HFL0) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 1.1
(A1RGD1) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 1.1
AC133931_23(AC133931|pid:none) Oryza sativa (japonica cultivar-g... 35 1.1
CP000102_371(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 35 1.1
CP001048_2051(CP001048|pid:none) Yersinia pseudotuberculosis PB1... 35 1.1
AE009952_3476(AE009952|pid:none) Yersinia pestis KIM, complete g... 35 1.1
(A9L2P0) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 1.1
CP001252_913(CP001252|pid:none) Shewanella baltica OS223, comple... 35 1.1
CP001071_406(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 35 1.1
CP001025_2792(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 35 1.1
CP001032_22(CP001032|pid:none) Opitutus terrae PB90-1, complete ... 35 1.1
(Q8EAZ2) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 1.1
(A4THT9) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 1.1
CP000302_702(CP000302|pid:none) Shewanella denitrificans OS217, ... 35 1.1
(A3D837) RecName: Full=Bifunctional protein hldE; Includes: Re... 35 1.1
CP000090_105(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 35 1.5
AE000666_833(AE000666|pid:none) Methanothermobacter thermautotro... 35 1.5
DQ372941_17(DQ372941|pid:none) Methanococcus voltae enolase (MVO... 35 1.5
CP000903_2946(CP000903|pid:none) Bacillus weihenstephanensis KBA... 35 1.5
CP000875_1061(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 35 1.5
CP001068_160(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 35 1.5
(A7ZRT3) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 1.9
(Q7AAQ7) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 1.9
(Q31WY3) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 1.9
CP000529_3879(CP000529|pid:none) Polaromonas naphthalenivorans C... 34 1.9
BA000011_1239(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 34 1.9
EU895443_1(EU895443|pid:none) Escherichia coli strain TB182A ADP... 34 1.9
CU928163_3463(CU928163|pid:none) Escherichia coli UMN026 chromos... 34 1.9
(A1AFX4) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 1.9
(Q32BR2) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 1.9
(Q6N2R5) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 1.9
CU928158_2897(CU928158|pid:none) Escherichia fergusonii ATCC 354... 34 1.9
CP001110_2404(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 34 1.9
CP001132_306(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 34 2.5
CP000440_2946(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 34 2.5
BX950851_3558(BX950851|pid:none) Erwinia carotovora subsp. atros... 34 2.5
BX936398_2025(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 34 2.5
FN357422_28(FN357422|pid:none) Schistosoma mansoni genome sequen... 34 2.5
(A5EN78) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 2.5
(Q2RY67) RecName: Full=Bifunctional protein hldE; Includes: Re... 34 2.5
CP001600_509(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 34 2.5
(Q7UBI8) RecName: Full=Bifunctional protein hldE; Includes: Re... 33 3.2
AM167904_3070(AM167904|pid:none) Bordetella avium 197N complete ... 33 3.2
CP000781_3739(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 33 3.2
(Q0T0L1) RecName: Full=Bifunctional protein hldE; Includes: Re... 33 3.2
CP001047_532(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 33 3.2
(Q98RB3) RecName: Full=Probable phosphopantetheine adenylyltrans... 33 3.2
AC145320_23(AC145320|pid:none) Oryza sativa (japonica cultivar-g... 33 3.2
AL646052_309(AL646052|pid:none) Ralstonia solanacearum GMI1000 c... 33 4.2
AM778958_474(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 33 4.2
CP000721_4258(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 33 4.2
(Q3YXJ0) RecName: Full=Bifunctional protein hldE; Includes: Re... 33 4.2
CU861906_298(CU861906|pid:none) Ralstonia solanacearum strain Mo... 33 4.2
FN392321_1023(FN392321|pid:none) Pichia pastoris GS115 chromosom... 33 4.2
CP000316_4573(CP000316|pid:none) Polaromonas sp. JS666, complete... 33 5.5
CP000867_1698(CP000867|pid:none) Methanococcus maripaludis C6, c... 33 5.5
AF062890_1(AF062890|pid:none) Arabidopsis thaliana putative tran... 33 5.5
CU179680_39(CU179680|pid:none) Mycoplasma agalactiae PG2 chromos... 33 5.5
CP000742_240(CP000742|pid:none) Methanococcus vannielii SB, comp... 33 5.5
CP000850_1701(CP000850|pid:none) Salinispora arenicola CNS-205, ... 33 5.5
AM902716_487(AM902716|pid:none) Bordetella petrii strain DSM 128... 33 5.5
BX569692_232(BX569692|pid:none) Synechococcus sp. WH8102 complet... 33 5.5
BX950229_943(BX950229|pid:none) Methanococcus maripaludis strain... 33 5.5
(A7HUC7) RecName: Full=Bifunctional protein hldE; Includes: Re... 33 5.5
CP001280_649(CP001280|pid:none) Methylocella silvestris BL2, com... 32 7.2
CP001185_804(CP001185|pid:none) Thermosipho africanus TCF52B, co... 32 7.2
AC087425_17(AC087425|pid:none) Oryza sativa (japonica cultivar-g... 32 7.2
AF332093_415(AF332093|pid:none) White spot syndrome virus, compl... 32 9.4
AP009552_1838(AP009552|pid:none) Microcystis aeruginosa NIES-843... 32 9.4
AE004437_602(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 32 9.4
CP001503_3071(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 32 9.4
CP001365_2375(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 32 9.4
(A1WZB3) RecName: Full=Bifunctional protein hldE; Includes: Re... 32 9.4
>AM434804_3(AM434804|pid:none) Vitis vinifera contig VV78X033615.9,
whole genome shotgun sequence.
Length = 309
Score = 171 bits (433), Expect = 1e-41
Identities = 76/99 (76%), Positives = 88/99 (88%)
Frame = +1
Query: 217 TEDDDRLVRVYADGIYDLFHFGHARSLQQAKSLFKNTYLIVGVCNDEITHKLKGKTVMNG 396
+E++ + VRVYADGIYDLFHFGHARSL+QAK LF NTYL+VG CNDE+THK KGKTVM G
Sbjct: 4 SEENGKPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEVTHKYKGKTVMTG 63
Query: 397 EERAESLRHCRWVDEVVENAPWVVTQEFIDQHNIDYVSH 513
ER ESLRHCRWVDEV+ +APWV+TQEFID+H IDYV+H
Sbjct: 64 SERYESLRHCRWVDEVIPDAPWVLTQEFIDKHEIDYVAH 102
Lambda K H
0.314 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 669,412,526
Number of extensions: 11693139
Number of successful extensions: 38248
Number of sequences better than 10.0: 362
Number of HSP's gapped: 37782
Number of HSP's successfully gapped: 408
Length of query: 172
Length of database: 1,051,180,864
Length adjustment: 119
Effective length of query: 53
Effective length of database: 666,030,343
Effective search space: 35299608179
Effective search space used: 35299608179
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |